BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161285.2.1
(780 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB641393.1|CB641393 OSJNEb01A03.r OSJNEb Oryza sativa (j... 293 7e-077
gb|CB661902.1|CB661902 OSJNEd05F11.r OSJNEd Oryza sativa (j... 293 7e-077
gb|CB670940.1|CB670940 OSJNEe04E10.r OSJNEe Oryza sativa (j... 293 7e-077
gb|CB674069.1|CB674069 OSJNEe08P02.r OSJNEe Oryza sativa (j... 293 7e-077
dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA... 293 7e-077
gb|CB649773.1|CB649773 OSJNEb13O11.r OSJNEb Oryza sativa (j... 285 2e-074
gb|CB651549.1|CB651549 OSJNEb16I21.r OSJNEb Oryza sativa (j... 285 2e-074
dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA... 285 2e-074
dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA... 285 2e-074
gb|CB664093.1|CB664093 OSJNEd09J24.r OSJNEd Oryza sativa (j... 278 4e-072
gb|D46199.1|D46199 RICS10723A Rice green shoot Oryza sativa... 232 2e-058
gb|CB643141.1|CB643141 OSJNEb03K21.r OSJNEb Oryza sativa (j... 230 9e-058
gb|CB682403.1|CB682403 OSJNEf09L04.f OSJNEf Oryza sativa (j... 224 6e-056
gb|CB669652.1|CB669652 OSJNEe02E22.r OSJNEe Oryza sativa (j... 222 2e-055
gb|CB678078.1|CB678078 OSJNEe15K07.r OSJNEe Oryza sativa (j... 214 5e-053
gb|CF277012.1|CF277012 14ETL--02-G05.b1 Rice etiolated leaf... 210 8e-052
gb|CB668680.1|CB668680 OSJNEd16K11.f OSJNEd Oryza sativa (j... 208 3e-051
gb|CB668681.1|CB668681 OSJNEd16K11.r OSJNEd Oryza sativa (j... 208 3e-051
gb|CB663307.1|CB663307 OSJNEd08B16.r OSJNEd Oryza sativa (j... 196 1e-047
gb|CB669722.1|CB669722 OSJNEe02G23.f OSJNEe Oryza sativa (j... 196 1e-047
ref|XM_471515.1| Oryza sativa (japonica cultivar-group), p... 157 1e-035
gb|CF323512.1|CF323512 HDN--04-A19.g1 OsHDAC1-overexpressin... 147 1e-032
dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA... 147 1e-032
dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA... 147 1e-032
dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA... 145 4e-032
gb|CB637203.1|CB637203 OSJNEa03H23.r OSJNEa Oryza sativa (j... 121 6e-025
dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA... 119 2e-024
dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA... 119 2e-024
gb|CB682404.1|CB682404 OSJNEf09L04.r OSJNEf Oryza sativa (j... 107 9e-021
gb|CB671345.1|CB671345 OSJNEe04O03.r OSJNEe Oryza sativa (j... 105 4e-020
gb|CB645438.1|CB645438 OSJNEb07B22.r OSJNEb Oryza sativa (j... 100 2e-018
gb|AU033169.1|AU033169 AU033169 Rice shoot Oryza sativa (ja... 96 3e-017
gb|CB637777.1|CB637777 OSJNEa04P09.r OSJNEa Oryza sativa (j... 96 3e-017
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 94 1e-016
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 94 1e-016
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 94 1e-016
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 94 1e-016
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 94 1e-016
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 94 1e-016
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 94 1e-016
gb|CX728064.1|CX728064 OSJNEd08P02.r OSJNEd Oryza sativa (j... 92 5e-016
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 92 5e-016
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 92 5e-016
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 92 5e-016
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 92 5e-016
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 92 5e-016
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 92 5e-016
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 92 5e-016
gb|CB637215.1|CB637215 OSJNEa03I10.r OSJNEa Oryza sativa (j... 88 8e-015
gb|CB673445.1|CB673445 OSJNEe07P13.r OSJNEe Oryza sativa (j... 88 8e-015
gb|CV732956.1|CV732956 FLO--07-K16.g1 Rice flower lambda ph... 88 8e-015
gb|CB637085.1|CB637085 OSJNEa03E01.r OSJNEa Oryza sativa (j... 82 5e-013
gb|CB671150.1|CB671150 OSJNEe04J07.r OSJNEe Oryza sativa (j... 82 5e-013
gb|AACV01023904.1| Oryza sativa (japonica cultivar-group) c... 78 8e-012
gb|CB663675.1|CB663675 OSJNEd08P02.f OSJNEd Oryza sativa (j... 76 3e-011
gb|AQ575769.1|AQ575769 nbxb0087L14f CUGI Rice BAC Library O... 74 1e-010
gb|CB636966.1|CB636966 OSJNEa03A01.r OSJNEa Oryza sativa (j... 74 1e-010
gb|CB669692.1|CB669692 OSJNEe02F24.r OSJNEe Oryza sativa (j... 74 1e-010
gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 74 1e-010
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromoso... 74 1e-010
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|CV732955.1|CV732955 FLO--07-K16.b1 Rice flower lambda ph... 70 2e-009
gb|AQ050970.2|AQ050970 nbxb0004dD06r CUGI Rice BAC Library ... 68 8e-009
gb|CB664092.1|CB664092 OSJNEd09J24.f OSJNEd Oryza sativa (j... 68 8e-009
dbj|AP005514.2| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|AACV01004237.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 66 3e-008
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|AACV01022286.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|CF277013.1|CF277013 14ETL--02-G05.g1 Rice etiolated leaf... 62 5e-007
gb|AQ272630.1|AQ272630 nbxb0028E24r CUGI Rice BAC Library O... 60 2e-006
gb|AQ840400.1|AQ840400 nbxb0058D16r CUGI Rice BAC Library O... 60 2e-006
gb|D23838.1|D23838 RICR0328A Rice root Oryza sativa (japoni... 56 3e-005
gb|CB637289.1|CB637289 OSJNEa03L09.f OSJNEa Oryza sativa (j... 56 3e-005
gb|CA998416.1|CA998416 S345D_E12 Rice cold stress germinati... 52 5e-004
gb|CB637693.1|CB637693 OSJNEa04L18.r OSJNEa Oryza sativa (j... 52 5e-004
gb|CB650175.1|CB650175 OSJNEb14H19.f OSJNEb Oryza sativa (j... 52 5e-004
gb|CB672451.1|CB672451 OSJNEe06H22.f OSJNEe Oryza sativa (j... 52 5e-004
gb|CB672452.1|CB672452 OSJNEe06H22.r OSJNEe Oryza sativa (j... 52 5e-004
gb|CB676813.1|CB676813 OSJNEe13E16.r OSJNEe Oryza sativa (j... 52 5e-004
dbj|AK062471.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 52 5e-004
gb|AACV01006501.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CL521984.1|CL521984 SAL7C07 Flanking Sequence Tag of Ory... 46 0.028
>gb|CB641393.1|CB641393 OSJNEb01A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01A03 3', mRNA sequence
Length = 818
Score = 293 bits (148), Expect = 7e-077
Identities = 466/572 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 198 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 257
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 258 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 317
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 318 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 377
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 378 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 437
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 438 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 497
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 498 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 557
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 558 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 617
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 618 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 677
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 678 acatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaga 737
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 738 cttcctctacctgcatcacttctccaaacagc 769
>gb|CB661902.1|CB661902 OSJNEd05F11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05F11 3', mRNA sequence
Length = 810
Score = 293 bits (148), Expect = 7e-077
Identities = 466/572 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 185 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 244
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 245 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 304
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 305 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 364
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 365 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 424
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 425 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 484
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 485 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 544
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 545 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 604
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 605 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 664
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 665 acatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaga 724
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 725 cttcctctacctgcatcacttctccaaacagc 756
>gb|CB670940.1|CB670940 OSJNEe04E10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E10 3', mRNA sequence
Length = 787
Score = 293 bits (148), Expect = 7e-077
Identities = 466/572 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 185 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 244
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 245 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 304
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 305 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 364
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 365 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 424
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 425 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 484
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 485 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 544
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 545 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 604
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 605 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 664
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 665 acatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaga 724
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 725 cttcctctacctgcatcacttctccaaacagc 756
>gb|CB674069.1|CB674069 OSJNEe08P02.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P02 3', mRNA sequence
Length = 797
Score = 293 bits (148), Expect = 7e-077
Identities = 466/572 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 195 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 254
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 255 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 314
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 315 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 374
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 375 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 434
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 435 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 494
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 495 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 554
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 555 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 614
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 615 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 674
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 675 acatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaga 734
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 735 cttcctctacctgcatcacttctccaaacagc 766
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full
insert sequence
Length = 2272
Score = 293 bits (148), Expect = 7e-077
Identities = 466/572 (81%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 2090 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 2031
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 2030 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 1971
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 1970 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 1911
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 1910 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 1851
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 1850 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 1791
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 1790 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 1731
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 1730 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 1671
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 1670 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 1611
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 1610 acatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaga 1551
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 1550 cttcctctacctgcatcacttctccaaacagc 1519
>gb|CB649773.1|CB649773 OSJNEb13O11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13O11 3', mRNA sequence
Length = 815
Score = 285 bits (144), Expect = 2e-074
Identities = 465/572 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 184 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 243
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 244 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 303
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 304 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 363
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 364 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 423
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 424 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 483
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 484 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 543
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 544 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 603
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 604 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 663
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| |||
Sbjct: 664 acatcactattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtaga 723
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 724 cttcctctacctgcatcacttctccaaacagc 755
>gb|CB651549.1|CB651549 OSJNEb16I21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I21 3', mRNA sequence
Length = 821
Score = 285 bits (144), Expect = 2e-074
Identities = 465/572 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 185 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 244
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 245 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 304
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 305 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 364
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 365 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 424
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 425 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 484
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 485 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 544
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 545 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 604
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 605 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 664
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| |||
Sbjct: 665 acatcactattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtaga 724
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 725 cttcctctacctgcatcacttctccaaacagc 756
>dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B06, full
insert sequence
Length = 926
Score = 285 bits (144), Expect = 2e-074
Identities = 465/572 (81%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 582 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 523
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 522 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 463
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 462 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 403
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 402 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 343
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 342 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 283
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 282 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 223
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 222 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 163
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 162 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 103
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| |||
Sbjct: 102 acatcactattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtaga 43
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 42 cttcctctacctgcatcacttctccaaacagc 11
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full
insert sequence
Length = 2285
Score = 285 bits (144), Expect = 2e-074
Identities = 465/572 (81%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 2096 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 2037
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 2036 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 1977
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 1976 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 1917
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 1916 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 1857
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 1856 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 1797
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 1796 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 1737
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 1736 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 1677
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 1676 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 1617
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| |||
Sbjct: 1616 acatcactattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtaga 1557
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 1556 cttcctctacctgcatcacttctccaaacagc 1525
>gb|CB664093.1|CB664093 OSJNEd09J24.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09J24 3', mRNA sequence
Length = 861
Score = 278 bits (140), Expect = 4e-072
Identities = 446/548 (81%)
Strand = Plus / Plus
Query: 231 gagtgaggagccagcgtgacctgcatctgctccgcggcgttgctcagctggcttttcacc 290
||||||||||| |||||||| ||||||||||| || || ||| ||||||||||| ||
Sbjct: 254 gagtgaggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgaca 313
Query: 291 ggcgcaaccttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgagg 350
|| ||||||| ||||||||||| || |||||||| ||||| || |||| || ||||
Sbjct: 314 ggaacaaccttattcgggttactaaaagagttctcatccatcacattgctggatgtgata 373
Query: 351 acggtggcggttgatcccagcgcgttgacgctggccccgagcccgctcgtggagaccgtg 410
|| ||||| ||||||||||| ||||| || | |||| ||||| | | |||| ||||
Sbjct: 374 acagtggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtg 433
Query: 411 aggctaacggggtccgacccgaagttcacgaccttcactctcaggaagctattctctgca 470
||||| || || || ||||| ||||| | | ||| ||||| | ||||||||| || | |
Sbjct: 434 aggctcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaa 493
Query: 471 tcctgccacgtgatcgcagacgcggccagcgaactcgagtaccgggaactgatattaacc 530
|||||||| || || ||||| || ||||| |||| ||||| | |||| |||| |||
Sbjct: 494 tcctgccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaatt 553
Query: 531 ggatggatcatggcgccgcttgactcgcggaaaatcgtctgcatccagtagctaggagtt 590
||||| | ||| || ||||| || || ||||||| |||||||||||||| |||||||||
Sbjct: 554 ggatgaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagtt 613
Query: 591 ccatagtgctgccaggagttgaagacgatagcgtccgggttccacgtttggtcattgtcg 650
|| || || ||||||||||| || || || ||||| |||||||||||||| ||||||| |
Sbjct: 614 ccgtattgttgccaggagttaaatacaatggcgtctgggttccacgtttgatcattgttg 673
Query: 651 ttcacgaagagtggtgcgtaacttgccatctgaacaatatcactgttcttctccagacca 710
|||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 674 ttcacgaacagtggtgcataacttgccatctgaacaacatcactattcttctccagtcca 733
Query: 711 gtgaggaaagcagcttcagccaacgaagcaagaagactgcctctacccgcgtcacttctc 770
|| | |||||||||||| ||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 734 gtaaagaaagcagcttctgccaatgaagcaagtagacttcctctacctgcatcacttctc 793
Query: 771 cagacagc 778
|| |||||
Sbjct: 794 caaacagc 801
>gb|D46199.1|D46199 RICS10723A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 340
Score = 232 bits (117), Expect = 2e-058
Identities = 195/221 (88%)
Strand = Plus / Minus
Query: 558 cggaaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacg 617
||||||| |||||||||||||| ||||||||||| || || ||||||||||| || ||
Sbjct: 296 cggaaaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaataca 237
Query: 618 atagcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgcc 677
|| ||||| |||||||||||||| ||||||| ||||||||| |||||||| |||||||||
Sbjct: 236 atggcgtctgggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgcc 177
Query: 678 atctgaacaatatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaa 737
|||||||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 176 atctgaacaacatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaa 117
Query: 738 gcaagaagactgcctctacccgcgtcacttctccagacagc 778
||||| ||||| |||||||| || ||||||||||| |||||
Sbjct: 116 gcaagtagacttcctctacctgcatcacttctccaaacagc 76
>gb|CB643141.1|CB643141 OSJNEb03K21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03K21 3', mRNA sequence
Length = 766
Score = 230 bits (116), Expect = 9e-058
Identities = 188/212 (88%)
Strand = Plus / Plus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 545 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 604
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 605 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 664
Query: 687 atatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaaga 746
| |||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| |||
Sbjct: 665 acatcactattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtaga 724
Query: 747 ctgcctctacccgcgtcacttctccagacagc 778
|| |||||||| || ||||||||||| |||||
Sbjct: 725 cttcctctacctgcatcacttctccaaacagc 756
Score = 71.9 bits (36), Expect = 5e-010
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 232 agtgaggagccagcgtgacctgcatctgctccgcggcgttgctcagctggcttttcaccg 291
|||||||||| |||| ||| ||||||||||| || || ||| ||||||||||| ||||
Sbjct: 210 agtgaggagcaagcgggacttgcatctgctctgctgcattggaaagctggcttttgaccg 269
Query: 292 gcgcaaccttgttcgggttactgaaggagttctcgtccat 331
| ||||||| ||||||||||| || |||||||| |||||
Sbjct: 270 gaacaaccttattcgggttactaaaagagttctcatccat 309
>gb|CB682403.1|CB682403 OSJNEf09L04.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L04 5', mRNA sequence
Length = 752
Score = 224 bits (113), Expect = 6e-056
Identities = 194/221 (87%)
Strand = Plus / Minus
Query: 558 cggaaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacg 617
||||||| |||||||||||||| ||||||||||| || || ||||||||||| || ||
Sbjct: 582 cggaaaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaataca 523
Query: 618 atagcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgcc 677
|| ||||| |||||||||||||| ||||||| ||||||||| |||||||| |||||||||
Sbjct: 522 atggcgtctgggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgcc 463
Query: 678 atctgaacaatatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaa 737
|||||||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 462 atctgaacaacatcactattcttctccagtccagtaaggaaagcagcttctgccaatgaa 403
Query: 738 gcaagaagactgcctctacccgcgtcacttctccagacagc 778
||||| ||||| ||||||| || ||||||||||| |||||
Sbjct: 402 gcaagtagacttcctctacttgcatcacttctccaaacagc 362
>gb|CB669652.1|CB669652 OSJNEe02E22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02E22 3', mRNA sequence
Length = 819
Score = 222 bits (112), Expect = 2e-055
Identities = 400/496 (80%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 324 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 383
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 384 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 443
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 444 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 503
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 504 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 563
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 564 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 623
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 624 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 683
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 684 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 743
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 744 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 803
Query: 687 atatcactgttcttct 702
| |||||| |||||||
Sbjct: 804 acatcactattcttct 819
>gb|CB678078.1|CB678078 OSJNEe15K07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15K07 3', mRNA sequence
Length = 691
Score = 214 bits (108), Expect = 5e-053
Identities = 393/488 (80%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 200 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 259
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 260 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 319
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 320 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 379
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 380 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 439
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 440 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 499
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 500 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 559
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 560 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 619
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 620 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaaca 679
Query: 687 atatcact 694
| ||||||
Sbjct: 680 acatcact 687
>gb|CF277012.1|CF277012 14ETL--02-G05.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-G05, mRNA sequence
Length = 552
Score = 210 bits (106), Expect = 8e-052
Identities = 193/221 (87%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 558 cggaaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacg 617
||||||| |||||||||||||| ||||||||||| || || || |||||||| || ||
Sbjct: 480 cggaaaagagtctgcatccagtaactaggagttccgtattgttgncaggagttaaataca 421
Query: 618 atagcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgcc 677
|| ||||| |||||||||||||| ||||||| ||||||||| |||||||| |||||||||
Sbjct: 420 atggcgtctgggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgcc 361
Query: 678 atctgaacaatatcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaa 737
|||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 360 atctgaacaacatcac-attcttctccagtccagtaaggaaagcagcttctgccaatgaa 302
Query: 738 gcaagaagactgcctctacccgcgtcacttctccagacagc 778
||||| ||||| |||||||| || ||||||||||| |||||
Sbjct: 301 gcaagtagacttcctctacctgcatcacttctccaaacagc 261
>gb|CB668680.1|CB668680 OSJNEd16K11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16K11 5', mRNA sequence
Length = 752
Score = 208 bits (105), Expect = 3e-051
Identities = 393/489 (80%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 730 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 671
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 670 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 611
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 610 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 551
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 550 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 491
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 490 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 431
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 430 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 371
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 370 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 311
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 310 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 251
Query: 687 atatcactg 695
| |||||||
Sbjct: 250 acatcactg 242
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| ||||||
Sbjct: 102 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaaacttcctcta 43
Query: 756 cccgcgtcacttctcca 772
|| | |||||||||||
Sbjct: 42 cctacatcacttctcca 26
>gb|CB668681.1|CB668681 OSJNEd16K11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16K11 3', mRNA sequence
Length = 772
Score = 208 bits (105), Expect = 3e-051
Identities = 393/489 (80%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 190 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 249
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 250 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 309
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 310 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 369
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 370 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 429
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 430 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 489
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 490 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 549
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 550 gtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatggcgtct 609
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 610 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 669
Query: 687 atatcactg 695
| |||||||
Sbjct: 670 acatcactg 678
>gb|CB663307.1|CB663307 OSJNEd08B16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B16 3', mRNA sequence
Length = 838
Score = 196 bits (99), Expect = 1e-047
Identities = 391/487 (80%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 353 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 412
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 413 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 472
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 473 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 532
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 533 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 592
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 593 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 652
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 653 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 712
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| ||||||||||| || || ||||||||||| || || || |||||
Sbjct: 713 gtctgcatccagtaactaggagttccgtattgttgccaggagtt-aatacaatggcgtct 771
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaaca 686
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 772 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaaca 831
Query: 687 atatcac 693
| |||||
Sbjct: 832 acatcac 838
>gb|CB669722.1|CB669722 OSJNEe02G23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02G23 5', mRNA sequence
Length = 798
Score = 196 bits (99), Expect = 1e-047
Identities = 381/475 (80%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 324 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 383
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 384 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 443
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 444 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 503
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 504 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 563
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 564 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 623
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 624 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 683
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 684 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 743
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatct 681
|||||||||||||| ||||||| |||||||||||||||||| |||||||||||||
Sbjct: 744 gggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatct 798
>ref|XM_471515.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1965
Score = 157 bits (79), Expect = 1e-035
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 555 tcgcggaaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaag 614
||||||||||| |||||||||||||| |||||| ||||||| || | ||| |||||||||
Sbjct: 1592 tcgcggaaaattgtctgcatccagtaactaggacttccatactgtttccatgagttgaag 1533
Query: 615 acgatagcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaactt 674
|||| ||| | |||||||||| | ||||| || |||| |||||| ||||| || ||
Sbjct: 1532 acgacagcagctgggttccacgagagatcattatcattcatgaagagcggtgcatagctg 1473
Query: 675 gccatctgaacaatatcactgttcttctccagaccagtgaggaaagcagcttcagccaac 734
||||||||||||| |||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 1472 gccatctgaacaacatcactattcttctccagtccagtgaggaaagcagcctcagccagt 1413
Query: 735 gaagcaagaagactgcctctacc 757
|| ||||||||| | ||||||||
Sbjct: 1412 gaggcaagaagagttcctctacc 1390
>gb|CF323512.1|CF323512 HDN--04-A19.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-A19, mRNA sequence
Length = 498
Score = 147 bits (74), Expect = 1e-032
Identities = 141/161 (87%), Gaps = 3/161 (1%)
Strand = Plus / Minus
Query: 621 gcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatc 680
||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||
Sbjct: 486 gcgtctgggttccacgtttgatcattgttgttcacgaagagtggtgcataacttgccatc 427
Query: 681 tgaacaatat-cactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagc 739
||||||| || |||| ||||||||||| ||||| |||||||| || || ||||| |||||
Sbjct: 426 tgaacaacatccactattcttctccagtccagtaaggaaagctgcctctgccaatgaagc 367
Query: 740 aagaagac--tgcctctacccgcgtcacttctccagacagc 778
||| |||| | |||||||| || ||||||||||| |||||
Sbjct: 366 aagtagactttccctctacctgcatcacttctccaaacagc 326
>dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B08, full
insert sequence
Length = 2783
Score = 147 bits (74), Expect = 1e-032
Identities = 257/318 (80%)
Strand = Plus / Minus
Query: 428 cccgaagttcacgaccttcactctcaggaagctattctctgcatcctgccacgtgatcgc 487
||||||||| || | |||||||||||| ||| ||||||| || || ||||| ||||| ||
Sbjct: 2047 cccgaagtttactatcttcactctcagaaaggtattctcagcgtcttgccaggtgattgc 1988
Query: 488 agacgcggccagcgaactcgagtaccgggaactgatattaaccggatggatcatggcgcc 547
||| || |||| || ||||| | ||||||||| ||| ||||| ||||| || ||
Sbjct: 1987 agaggcagccaataaatcagagtagctggaactgatcataattggatgaatcatagcacc 1928
Query: 548 gcttgactcgcggaaaatcgtctgcatccagtagctaggagttccatagtgctgccagga 607
|||||| || |||||| ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 1927 gcttgattcacggaaatatgtctgcatccaataactaggagttccatactgttgccagga 1868
Query: 608 gttgaagacgatagcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgc 667
||||||||| || || || |||||||| | || ||||| |||||||||||||||||
Sbjct: 1867 gttgaagacaatcgcatctgggttccagacgcgatcgttgtcattcacgaagagtggtgc 1808
Query: 668 gtaacttgccatctgaacaatatcactgttcttctccagaccagtgaggaaagcagcttc 727
|||| |||||||||||| | |||||| || ||||| | |||| | ||||||||||||||
Sbjct: 1807 ataacatgccatctgaacgacatcactatttttctctaaaccaattaggaaagcagcttc 1748
Query: 728 agccaacgaagcaagaag 745
||||| || ||||||||
Sbjct: 1747 tgccaatgatgcaagaag 1730
>dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E09, full
insert sequence
Length = 3254
Score = 147 bits (74), Expect = 1e-032
Identities = 257/318 (80%)
Strand = Plus / Minus
Query: 428 cccgaagttcacgaccttcactctcaggaagctattctctgcatcctgccacgtgatcgc 487
||||||||| || | |||||||||||| ||| ||||||| || || ||||| ||||| ||
Sbjct: 1856 cccgaagtttactatcttcactctcagaaaggtattctcagcgtcttgccaggtgattgc 1797
Query: 488 agacgcggccagcgaactcgagtaccgggaactgatattaaccggatggatcatggcgcc 547
||| || |||| || ||||| | ||||||||| ||| ||||| ||||| || ||
Sbjct: 1796 agaggcagccaataaatcagagtagctggaactgatcataattggatgaatcatagcacc 1737
Query: 548 gcttgactcgcggaaaatcgtctgcatccagtagctaggagttccatagtgctgccagga 607
|||||| || |||||| ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 1736 gcttgattcacggaaatatgtctgcatccaataactaggagttccatactgttgccagga 1677
Query: 608 gttgaagacgatagcgtccgggttccacgtttggtcattgtcgttcacgaagagtggtgc 667
||||||||| || || || |||||||| | || ||||| |||||||||||||||||
Sbjct: 1676 gttgaagacaatcgcatctgggttccagacgcgatcgttgtcattcacgaagagtggtgc 1617
Query: 668 gtaacttgccatctgaacaatatcactgttcttctccagaccagtgaggaaagcagcttc 727
|||| |||||||||||| | |||||| || ||||| | |||| | ||||||||||||||
Sbjct: 1616 ataacatgccatctgaacgacatcactatttttctctaaaccaattaggaaagcagcttc 1557
Query: 728 agccaacgaagcaagaag 745
||||| || ||||||||
Sbjct: 1556 tgccaatgatgcaagaag 1539
>dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067L10, full
insert sequence
Length = 2367
Score = 145 bits (73), Expect = 4e-032
Identities = 148/173 (85%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 1798 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 1739
Query: 630 ttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaata 689
||||| || | ||||| || ||||||||||||||||| || ||||||||||||| | |
Sbjct: 1738 ttccaggtgcgatcattttcattcacgaagagtggtgcatagcttgccatctgaatgaca 1679
Query: 690 tcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
|| ||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 1678 tcgctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 1626
>gb|CB637203.1|CB637203 OSJNEa03H23.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03H23 3', mRNA sequence
Length = 598
Score = 121 bits (61), Expect = 6e-025
Identities = 334/425 (78%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 174 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 233
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 234 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 293
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 294 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 353
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 354 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 413
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 414 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 473
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 474 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 533
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
|||||||||||||| |||||||||||||| || ||||||||||| || || || |||||
Sbjct: 534 gtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatggcgtct 593
Query: 627 gggtt 631
|||||
Sbjct: 594 gggtt 598
>dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G03, full
insert sequence
Length = 1396
Score = 119 bits (60), Expect = 2e-024
Identities = 147/176 (83%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||| ||||| || |||||||| ||||| || || || || |||
Sbjct: 779 tgcatccaataactaggagtgccatactgttgccaggaattgaatacaattgcatctggg 720
Query: 630 ttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaata 689
||||| || |||||||||| || |||||||| ||||| || |||||||||||||||| |
Sbjct: 719 ttccaggtgcggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaaga 660
Query: 690 tcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| || ||||| | ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 659 tcactatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaag 604
>dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096C04, full
insert sequence
Length = 2409
Score = 119 bits (60), Expect = 2e-024
Identities = 147/176 (83%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||| ||||| || |||||||| ||||| || || || || |||
Sbjct: 1792 tgcatccaataactaggagtgccatactgttgccaggaattgaatacaattgcatctggg 1733
Query: 630 ttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaata 689
||||| || |||||||||| || |||||||| ||||| || |||||||||||||||| |
Sbjct: 1732 ttccaggtgcggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaaga 1673
Query: 690 tcactgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| || ||||| | ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1672 tcactatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaag 1617
>gb|CB682404.1|CB682404 OSJNEf09L04.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L04 3', mRNA sequence
Length = 804
Score = 107 bits (54), Expect = 9e-021
Identities = 303/386 (78%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 418 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 477
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 478 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 537
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || |||| || |||| || ||||| ||||||||||| ||||| || | ||||
Sbjct: 538 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgttaacacgggcc 597
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 598 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 657
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 658 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 717
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| ||| ||||| | ||| || ||||| || || |||||||
Sbjct: 718 gagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacggaaaaga 777
Query: 567 gtctgcatccagtagctaggagttcc 592
|||||||||||||| |||||||||||
Sbjct: 778 gtctgcatccagtaactaggagttcc 803
>gb|CB671345.1|CB671345 OSJNEe04O03.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04O03 3', mRNA sequence
Length = 785
Score = 105 bits (53), Expect = 4e-020
Identities = 305/389 (78%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 391 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 450
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 451 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 510
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgttgacgctggcc 386
||||| || || | || ||||| || ||||| ||||||||||| || || || | ||||
Sbjct: 511 tccatcacattactggatgtgagaacagtggcagttgatcccagtgcattaacacgggcc 570
Query: 387 ccgagcccgctcgtggagaccgtgaggctaacggggtccgacccgaagttcacgaccttc 446
||||| | | |||| ||||||||| || || || ||||| ||||| | | |||
Sbjct: 571 tgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtttataatcttt 630
Query: 447 actctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcgaactc 506
||||| | ||||||||| || | ||||||||| || || ||||| || ||||| ||||
Sbjct: 631 actcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagagaacca 690
Query: 507 gagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcggaaaatc 566
||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |||||
Sbjct: 691 gagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccgaaaaga 750
Query: 567 gtctgcatccagtagctaggagttccata 595
|||||||||||||| ||||||||||||||
Sbjct: 751 gtctgcatccagtaactaggagttccata 779
>gb|CB645438.1|CB645438 OSJNEb07B22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07B22 3', mRNA sequence
Length = 657
Score = 99.6 bits (50), Expect = 2e-018
Identities = 96/110 (87%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 568 tctgcatccagtagctaggagttcca-tagtgctgccaggagttgaagacgatagcgtcc 626
||||||||||||| ||||||||||| || |||||||| ||||| || || || |||||
Sbjct: 548 tctgcatccagtaactaggagttcccgtattgctgccacgagttaaatacaatggcgtct 607
Query: 627 gggttccacgtttggtcattgtcgttcacgaagagtggtgcgtaacttgc 676
|||||||||||||| ||||||| ||||||||| |||||||| ||||||||
Sbjct: 608 gggttccacgtttgatcattgttgttcacgaacagtggtgcataacttgc 657
Score = 83.8 bits (42), Expect = 1e-013
Identities = 138/170 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 186 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 245
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || || |||||
Sbjct: 246 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagaattctca 305
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgtt 376
||||| || |||| || |||| || ||||| ||||||||||| |||||
Sbjct: 306 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgtt 355
>gb|AU033169.1|AU033169 AU033169 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S4337_1Z, mRNA sequence
Length = 407
Score = 95.6 bits (48), Expect = 3e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 194 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 135
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 134 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 75
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccag 370
||||| || || | || |||||||| ||||| |||||||||||
Sbjct: 74 tccatcacattactggatgtgaggacagtggcagttgatcccag 31
>gb|CB637777.1|CB637777 OSJNEa04P09.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04P09 3', mRNA sequence
Length = 515
Score = 95.6 bits (48), Expect = 3e-017
Identities = 135/164 (82%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
|||||||||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 346 agcgccagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 405
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 406 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 465
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccag 370
||||| || || | || ||||| || ||||| |||||||||||
Sbjct: 466 tccatcacattactggatgtgagaacagtggcagttgatcccag 509
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 64895 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 64954
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 64955 cctgcatcacttctccaaacagc 64977
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Plus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 55882 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 55941
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 55942 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 56001
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 56002 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 56061
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 56062 gcatctgggttcca 56075
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 64694 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 64753
Query: 694 tg 695
||
Sbjct: 64754 tg 64755
Score = 77.8 bits (39), Expect = 8e-012
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 641 gtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||||||| || |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 26681 gtcattgtcatttacgaagagtggtgcataacttgccatctgaacaacatcactg 26735
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Plus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 64416 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 64475
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 64476 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 64535
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 64536 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 64595
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 64596 cgtctgggttccac 64609
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 56178 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 56228
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 63986 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 64045
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 64046 gcattggaaagctggctttt 64065
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 64188 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 64247
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 64248 gcagttgatcccagtgcgtt 64267
Score = 48.1 bits (24), Expect = 0.007
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
||||||| ||| || |||||||| ||||| ||||||||||| ||||| || || || ||
Sbjct: 26516 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 26575
Query: 627 gggttcca 634
||||||||
Sbjct: 26576 gggttcca 26583
Score = 46.1 bits (23), Expect = 0.028
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 699 ttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 27044 ttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaag 27090
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1364275 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 1364216
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1364215 cctgcatcacttctccaaacagc 1364193
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 1373288 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 1373229
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 1373228 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 1373169
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1373168 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 1373109
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 1373108 gcatctgggttcca 1373095
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 1364476 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 1364417
Query: 694 tg 695
||
Sbjct: 1364416 tg 1364415
Score = 77.8 bits (39), Expect = 8e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 641 gtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||||||| || |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1402489 gtcattgtcatttacgaagagtggtgcataacttgccatctgaacaacatcactg 1402435
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 1364754 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1364695
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 1364694 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1364635
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 1364634 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1364575
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 1364574 cgtctgggttccac 1364561
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 1372992 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 1372942
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1365184 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1365125
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1365124 gcattggaaagctggctttt 1365105
Score = 48.1 bits (24), Expect = 0.007
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
||||||| ||| || |||||||| ||||| ||||||||||| ||||| || || || ||
Sbjct: 1402654 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1402595
Query: 627 gggttcca 634
||||||||
Sbjct: 1402594 gggttcca 1402587
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 1364982 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 1364923
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 1364922 gcagttgatcccagtgcgtt 1364903
Score = 46.1 bits (23), Expect = 0.028
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 699 ttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1402126 ttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaag 1402080
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 15935 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 15994
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 15995 cctgcatcacttctccaaacagc 16017
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Plus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 6921 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 6980
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 6981 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 7040
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 7041 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 7100
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 7101 gcatctgggttcca 7114
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 15734 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 15793
Query: 694 tg 695
||
Sbjct: 15794 tg 15795
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Plus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 15456 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 15515
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 15516 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 15575
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 15576 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 15635
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 15636 cgtctgggttccac 15649
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 7217 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 7267
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 15228 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 15287
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 15288 gcagttgatcccagtgcgtt 15307
Score = 46.1 bits (23), Expect = 0.028
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 208 gcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcgg 267
|||| |||||||| | || ||| |||| |||||| |||||||| ||||||||||| || |
Sbjct: 15027 gcgcaagatcgaatgaggagaaagagttaggagcaagcgtgacttgcatctgctctgctg 15086
Query: 268 cgttgctcagctggctttt 286
| ||| |||||||||||
Sbjct: 15087 cattggaaagctggctttt 15105
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1289392 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 1289333
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1289332 cctgcatcacttctccaaacagc 1289310
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 1298406 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 1298347
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 1298346 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 1298287
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1298286 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 1298227
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 1298226 gcatctgggttcca 1298213
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 1289593 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 1289534
Query: 694 tg 695
||
Sbjct: 1289533 tg 1289532
Score = 77.8 bits (39), Expect = 8e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 641 gtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||||||| || |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1330643 gtcattgtcatttacgaagagtggtgcataacttgccatctgaacaacatcactg 1330589
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 1289871 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1289812
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 1289811 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1289752
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 1289751 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1289692
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 1289691 cgtctgggttccac 1289678
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 1298110 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 1298060
Score = 48.1 bits (24), Expect = 0.007
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
||||||| ||| || |||||||| ||||| ||||||||||| ||||| || || || ||
Sbjct: 1330808 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1330749
Query: 627 gggttcca 634
||||||||
Sbjct: 1330748 gggttcca 1330741
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 1290099 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 1290040
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 1290039 gcagttgatcccagtgcgtt 1290020
Score = 46.1 bits (23), Expect = 0.028
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 699 ttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1330280 ttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaag 1330234
Score = 46.1 bits (23), Expect = 0.028
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 208 gcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcgg 267
|||| |||||||| | || ||| |||| |||||| |||||||| ||||||||||| || |
Sbjct: 1290300 gcgcaagatcgaatgaggagaaagagttaggagcaagcgtgacttgcatctgctctgctg 1290241
Query: 268 cgttgctcagctggctttt 286
| ||| |||||||||||
Sbjct: 1290240 cattggaaagctggctttt 1290222
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1289392 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 1289333
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1289332 cctgcatcacttctccaaacagc 1289310
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 1298406 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 1298347
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 1298346 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 1298287
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1298286 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 1298227
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 1298226 gcatctgggttcca 1298213
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 1289593 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 1289534
Query: 694 tg 695
||
Sbjct: 1289533 tg 1289532
Score = 77.8 bits (39), Expect = 8e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 641 gtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||||||| || |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1330643 gtcattgtcatttacgaagagtggtgcataacttgccatctgaacaacatcactg 1330589
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 1289871 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1289812
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 1289811 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1289752
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 1289751 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1289692
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 1289691 cgtctgggttccac 1289678
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 1298110 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 1298060
Score = 48.1 bits (24), Expect = 0.007
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
||||||| ||| || |||||||| ||||| ||||||||||| ||||| || || || ||
Sbjct: 1330808 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1330749
Query: 627 gggttcca 634
||||||||
Sbjct: 1330748 gggttcca 1330741
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 1290099 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 1290040
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 1290039 gcagttgatcccagtgcgtt 1290020
Score = 46.1 bits (23), Expect = 0.028
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 699 ttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1330280 ttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaag 1330234
Score = 46.1 bits (23), Expect = 0.028
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 208 gcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcgg 267
|||| |||||||| | || ||| |||| |||||| |||||||| ||||||||||| || |
Sbjct: 1290300 gcgcaagatcgaatgaggagaaagagttaggagcaagcgtgacttgcatctgctctgctg 1290241
Query: 268 cgttgctcagctggctttt 286
| ||| |||||||||||
Sbjct: 1290240 cattggaaagctggctttt 1290222
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1364274 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 1364215
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1364214 cctgcatcacttctccaaacagc 1364192
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 1373287 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 1373228
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 1373227 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 1373168
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1373167 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 1373108
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 1373107 gcatctgggttcca 1373094
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 1364475 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 1364416
Query: 694 tg 695
||
Sbjct: 1364415 tg 1364414
Score = 77.8 bits (39), Expect = 8e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 641 gtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||||||| || |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1402488 gtcattgtcatttacgaagagtggtgcataacttgccatctgaacaacatcactg 1402434
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 1364753 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1364694
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 1364693 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1364634
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 1364633 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1364574
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 1364573 cgtctgggttccac 1364560
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 1372991 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 1372941
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1365183 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1365124
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1365123 gcattggaaagctggctttt 1365104
Score = 48.1 bits (24), Expect = 0.007
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
||||||| ||| || |||||||| ||||| ||||||||||| ||||| || || || ||
Sbjct: 1402653 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1402594
Query: 627 gggttcca 634
||||||||
Sbjct: 1402593 gggttcca 1402586
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 1364981 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 1364922
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 1364921 gcagttgatcccagtgcgtt 1364902
Score = 46.1 bits (23), Expect = 0.028
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 699 ttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1402125 ttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaag 1402079
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 93.7 bits (47), Expect = 1e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1364274 ttcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctcta 1364215
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1364214 cctgcatcacttctccaaacagc 1364192
Score = 91.7 bits (46), Expect = 5e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
|||||||||||||| ||| ||||||| || || ||||| ||||| ||||| || ||||
Sbjct: 1373287 accttcactctcagaaaggtattctcagcgtcttgccaggtgattgcagaggcagccaat 1373228
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|| ||||| | ||||||||| ||| ||||| ||||| || |||||||| || |||
Sbjct: 1373227 aaatcagagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacgg 1373168
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
||| ||||||||||| || |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1373167 aaatatgtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatc 1373108
Query: 621 gcgtccgggttcca 634
|| || ||||||||
Sbjct: 1373107 gcatctgggttcca 1373094
Score = 83.8 bits (42), Expect = 1e-013
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 1364475 acgtttgatcattgttgttcacgaacagtggtgcataacttgccatctgaacaacatcac 1364416
Query: 694 tg 695
||
Sbjct: 1364415 tg 1364414
Score = 77.8 bits (39), Expect = 8e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 641 gtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||||||| || |||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 1402488 gtcattgtcatttacgaagagtggtgcataacttgccatctgaacaacatcactg 1402434
Score = 75.8 bits (38), Expect = 3e-011
Identities = 155/194 (79%)
Strand = Plus / Minus
Query: 442 ccttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagcg 501
|||| ||||| | ||||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct: 1364753 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1364694
Query: 502 aactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgga 561
||| ||||| | |||| |||| ||| ||||| | ||| || ||||| || || ||||
Sbjct: 1364693 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1364634
Query: 562 aaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatag 621
||| |||||||||||||| ||||||||||| || || ||||||||||| || || || |
Sbjct: 1364633 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1364574
Query: 622 cgtccgggttccac 635
|||| |||||||||
Sbjct: 1364573 cgtctgggttccac 1364560
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 645 ttgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
||||| ||||||||||||||||| |||| |||||||||||| | |||||||
Sbjct: 1372991 ttgtcattcacgaagagtggtgcataacatgccatctgaacgacatcactg 1372941
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1365183 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1365124
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1365123 gcattggaaagctggctttt 1365104
Score = 48.1 bits (24), Expect = 0.007
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 567 gtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtcc 626
||||||| ||| || |||||||| ||||| ||||||||||| ||||| || || || ||
Sbjct: 1402653 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1402594
Query: 627 gggttcca 634
||||||||
Sbjct: 1402593 gggttcca 1402586
Score = 48.1 bits (24), Expect = 0.007
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || |||| || |||| || |||
Sbjct: 1364981 accttattcgggttactaaaagagttctcatccatcacattgctggatgtgataacagtg 1364922
Query: 357 gcggttgatcccagcgcgtt 376
|| ||||||||||| |||||
Sbjct: 1364921 gcagttgatcccagtgcgtt 1364902
Score = 46.1 bits (23), Expect = 0.028
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 699 ttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1402125 ttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaag 1402079
>gb|CX728064.1|CX728064 OSJNEd08P02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08P02 3', mRNA sequence
Length = 553
Score = 91.7 bits (46), Expect = 5e-016
Identities = 139/170 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 195 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 254
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 255 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 314
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccagcgcgtt 376
||||| || |||| || |||| || ||||| ||||||||||| |||||
Sbjct: 315 tccatcacattgctggatgtgataacagtggcagttgatcccagtgcgtt 364
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 78970 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 78911
Query: 694 tg 695
||
Sbjct: 78910 tg 78909
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 79249 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 79190
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 79189 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 79130
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 79129 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 79070
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 79069 gcgtctgggttccac 79055
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 78767 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 78708
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 78707 cctgcatcacttctccaaacagc 78685
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 86502 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 86443
Query: 630 ttcca 634
|||||
Sbjct: 86442 ttcca 86438
Score = 63.9 bits (32), Expect = 1e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 640 ggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
|||||||||| || |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 110543 ggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaagatcactg 110488
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 85756 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 85707
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 79677 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 79618
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 79617 gcattggaaagctggctttt 79598
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 86341 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 86299
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 708 ccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| ||||||||||| ||||||| |||||||||||
Sbjct: 110163 ccagtaaggaaagcagcctcagccagtgaagcaagaag 110126
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 79475 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 79416
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 79415 gcagttgatcccag 79402
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 458457 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 458398
Query: 694 tg 695
||
Sbjct: 458397 tg 458396
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 458736 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 458677
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 458676 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 458617
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 458616 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 458557
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 458556 gcgtctgggttccac 458542
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 458254 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 458195
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 458194 cctgcatcacttctccaaacagc 458172
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 465989 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 465930
Query: 630 ttcca 634
|||||
Sbjct: 465929 ttcca 465925
Score = 63.9 bits (32), Expect = 1e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 640 ggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
|||||||||| || |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 490030 ggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaagatcactg 489975
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 465243 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 465194
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 459164 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 459105
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 459104 gcattggaaagctggctttt 459085
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 465828 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 465786
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 708 ccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| ||||||||||| ||||||| |||||||||||
Sbjct: 489650 ccagtaaggaaagcagcctcagccagtgaagcaagaag 489613
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 458962 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 458903
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 458902 gcagttgatcccag 458889
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 22308 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 22367
Query: 694 tg 695
||
Sbjct: 22368 tg 22369
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Plus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 22029 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 22088
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 22089 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 22148
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 22149 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 22208
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 22209 gcgtctgggttccac 22223
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 22511 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 22570
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 22571 cctgcatcacttctccaaacagc 22593
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 14776 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 14835
Query: 630 ttcca 634
|||||
Sbjct: 14836 ttcca 14840
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 15522 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 15571
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 21601 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 21660
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 21661 gcattggaaagctggctttt 21680
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 14937 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 14979
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 21803 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 21862
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 21863 gcagttgatcccag 21876
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 1153322 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 1153263
Query: 694 tg 695
||
Sbjct: 1153262 tg 1153261
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 1153601 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1153542
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 1153541 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1153482
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 1153481 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1153422
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 1153421 gcgtctgggttccac 1153407
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 1153119 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 1153060
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1153059 cctgcatcacttctccaaacagc 1153037
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 1160854 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 1160795
Query: 630 ttcca 634
|||||
Sbjct: 1160794 ttcca 1160790
Score = 63.9 bits (32), Expect = 1e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 640 ggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
|||||||||| || |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 1185822 ggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaagatcactg 1185767
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 1160108 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 1160059
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1154029 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1153970
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1153969 gcattggaaagctggctttt 1153950
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 1160693 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 1160651
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 708 ccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1185442 ccagtaaggaaagcagcctcagccagtgaagcaagaag 1185405
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 1153827 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 1153768
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 1153767 gcagttgatcccag 1153754
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 1455614 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 1455555
Query: 694 tg 695
||
Sbjct: 1455554 tg 1455553
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 1455893 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1455834
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 1455833 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1455774
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 1455773 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1455714
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 1455713 gcgtctgggttccac 1455699
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 1455411 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 1455352
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1455351 cctgcatcacttctccaaacagc 1455329
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 1463146 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 1463087
Query: 630 ttcca 634
|||||
Sbjct: 1463086 ttcca 1463082
Score = 63.9 bits (32), Expect = 1e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 640 ggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
|||||||||| || |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 1488114 ggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaagatcactg 1488059
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 1462400 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 1462351
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1456321 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1456262
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1456261 gcattggaaagctggctttt 1456242
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 1462985 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 1462943
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 708 ccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1487734 ccagtaaggaaagcagcctcagccagtgaagcaagaag 1487697
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 1456119 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 1456060
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 1456059 gcagttgatcccag 1456046
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 1460175 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 1460116
Query: 694 tg 695
||
Sbjct: 1460115 tg 1460114
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 1460454 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1460395
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 1460394 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1460335
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 1460334 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1460275
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 1460274 gcgtctgggttccac 1460260
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 1459972 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 1459913
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1459912 cctgcatcacttctccaaacagc 1459890
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 1467707 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 1467648
Query: 630 ttcca 634
|||||
Sbjct: 1467647 ttcca 1467643
Score = 63.9 bits (32), Expect = 1e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 640 ggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
|||||||||| || |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 1491748 ggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaagatcactg 1491693
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 1466961 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 1466912
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1460882 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1460823
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1460822 gcattggaaagctggctttt 1460803
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 1467546 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 1467504
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 708 ccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1491368 ccagtaaggaaagcagcctcagccagtgaagcaagaag 1491331
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 1460680 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 1460621
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 1460620 gcagttgatcccag 1460607
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 91.7 bits (46), Expect = 5e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 634 acgtttggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcac 693
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 1457896 acgtttgatcattgttgttcacgaagagtggtgcataacttgccatctgaacaacatcac 1457837
Query: 694 tg 695
||
Sbjct: 1457836 tg 1457835
Score = 85.7 bits (43), Expect = 3e-014
Identities = 157/195 (80%)
Strand = Plus / Minus
Query: 441 accttcactctcaggaagctattctctgcatcctgccacgtgatcgcagacgcggccagc 500
||||| ||||| | ||||||||| || | ||||||||| || || ||||| || |||||
Sbjct: 1458175 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1458116
Query: 501 gaactcgagtaccgggaactgatattaaccggatggatcatggcgccgcttgactcgcgg 560
|||| ||||| | |||| |||| |||| ||||| | ||| || ||||| || || | |
Sbjct: 1458115 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1458056
Query: 561 aaaatcgtctgcatccagtagctaggagttccatagtgctgccaggagttgaagacgata 620
|||| |||||||||||||| |||||||||||||| || ||||||||||| || || ||
Sbjct: 1458055 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1457996
Query: 621 gcgtccgggttccac 635
||||| |||||||||
Sbjct: 1457995 gcgtctgggttccac 1457981
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 696 ttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaagaagactgcctcta 755
||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 1457693 ttcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctcta 1457634
Query: 756 cccgcgtcacttctccagacagc 778
|| || ||||||||||| |||||
Sbjct: 1457633 cctgcatcacttctccaaacagc 1457611
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 570 tgcatccagtagctaggagttccatagtgctgccaggagttgaagacgatagcgtccggg 629
|||||||| || |||||||||||||| || ||||||||||||||||| || || || |||
Sbjct: 1465428 tgcatccaataactaggagttccatactgttgccaggagttgaagacaattgcatctggg 1465369
Query: 630 ttcca 634
|||||
Sbjct: 1465368 ttcca 1465364
Score = 63.9 bits (32), Expect = 1e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 640 ggtcattgtcgttcacgaagagtggtgcgtaacttgccatctgaacaatatcactg 695
|||||||||| || |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 1489469 ggtcattgtcatttacgaagagcggtgcatagcttgccatctgaacaagatcactg 1489414
Score = 60.0 bits (30), Expect = 2e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 693 ctgttcttctccagaccagtgaggaaagcagcttcagccaacgaagcaag 742
||||| ||||| | ||||||||||||||||||||| |||||||| |||||
Sbjct: 1464682 ctgtttttctctaaaccagtgaggaaagcagcttctgccaacgatgcaag 1464633
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1458603 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 1458544
Query: 267 gcgttgctcagctggctttt 286
|| ||| |||||||||||
Sbjct: 1458543 gcattggaaagctggctttt 1458524
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 642 tcattgtcgttcacgaagagtggtgcgtaacttgccatctgaa 684
||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 1465267 tcattttcattcacgaagagtggtgcatagcttgccatctgaa 1465225
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 708 ccagtgaggaaagcagcttcagccaacgaagcaagaag 745
||||| ||||||||||| ||||||| |||||||||||
Sbjct: 1489089 ccagtaaggaaagcagcctcagccagtgaagcaagaag 1489052
Score = 44.1 bits (22), Expect = 0.11
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 297 accttgttcgggttactgaaggagttctcgtccatgacgttgccagacgtgaggacggtg 356
||||| ||||||||||| || |||||||| ||||| || || | || ||||| || |||
Sbjct: 1458401 accttattcgggttactaaaagagttctcatccatcacattactggatgtgagaacagtg 1458342
Query: 357 gcggttgatcccag 370
|| |||||||||||
Sbjct: 1458341 gcagttgatcccag 1458328
>gb|CB637215.1|CB637215 OSJNEa03I10.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03I10 3', mRNA sequence
Length = 553
Score = 87.7 bits (44), Expect = 8e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 371 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 430
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 431 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 490
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccag 370
||||| || || | || ||||| || ||||| |||||||||||
Sbjct: 491 tccatcacattactggatgtgagaacagtggcagttgatcccag 534
>gb|CB673445.1|CB673445 OSJNEe07P13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07P13 3', mRNA sequence
Length = 799
Score = 87.7 bits (44), Expect = 8e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 207 agcgccagatcgaaggcggtgaaggagtgaggagccagcgtgacctgcatctgctccgcg 266
||||| |||||||| | || ||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 471 agcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgcatctgctctgct 530
Query: 267 gcgttgctcagctggcttttcaccggcgcaaccttgttcgggttactgaaggagttctcg 326
|| ||| ||||||||||| || || ||||||| ||||||||||| || ||||||||
Sbjct: 531 gcattggaaagctggcttttgacaggaacaaccttattcgggttactaaaagagttctca 590
Query: 327 tccatgacgttgccagacgtgaggacggtggcggttgatcccag 370
||||| || || | || ||||| || ||||| |||||||||||
Sbjct: 591 tccatcacattactggatgtgagaacagtggcagttgatcccag 634
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 881,133
Number of Sequences: 438736
Number of extensions: 881133
Number of successful extensions: 3965
Number of sequences better than 0.5: 95
Number of HSP's better than 0.5 without gapping: 94
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3501
Number of HSP's gapped (non-prelim): 450
length of query: 780
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 759
effective length of database: 2,791,206,460
effective search space: 2118525703140
effective search space used: 2118525703140
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)