BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.2
(1186 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering s... 222 3e-055
dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia... 222 3e-055
dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA... 222 3e-055
dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA... 222 3e-055
dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA... 222 3e-055
ref|XM_473013.1| Oryza sativa (japonica cultivar-group), p... 222 3e-055
gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) c... 206 2e-050
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 206 2e-050
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 206 2e-050
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 206 2e-050
emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromoso... 206 2e-050
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 206 2e-050
gb|CF311469.1|CF311469 ABF--06-L04.g1 ABF3-overexpressing t... 192 3e-046
gb|CB654174.1|CB654174 OSJNEc05O21.r OSJNEc Oryza sativa (j... 167 2e-038
dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA... 167 2e-038
dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4... 167 2e-038
dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA... 167 2e-038
dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA... 167 2e-038
gb|AACV01010037.1| Oryza sativa (japonica cultivar-group) c... 167 2e-038
ref|XM_473009.1| Oryza sativa (japonica cultivar-group), p... 167 2e-038
gb|CB683115.1|CB683115 OSJNEf11B13.f OSJNEf Oryza sativa (j... 159 4e-036
gb|AU090552.1|AU090552 AU090552 Rice panicle at flowering s... 149 4e-033
gb|CA754096.1|CA754096 BR040009000_PLATE_C03_19_020.ab1 OA ... 127 1e-026
dbj|AP005001.1| Oryza sativa (japonica cultivar-group) chro... 127 1e-026
dbj|AK064754.1| Oryza sativa (japonica cultivar-group) cDNA... 127 1e-026
dbj|AP004111.3| Oryza sativa (japonica cultivar-group) geno... 127 1e-026
gb|AACV01004867.1| Oryza sativa (japonica cultivar-group) c... 127 1e-026
ref|XM_466626.1| Oryza sativa (japonica cultivar-group), mRNA 127 1e-026
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 127 1e-026
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 127 1e-026
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 127 1e-026
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 127 1e-026
gb|C19108.1|C19108 C19108 Rice green shoot Oryza sativa (ja... 119 4e-024
gb|AU089729.1|AU089729 AU089729 Rice green shoot Oryza sati... 117 1e-023
gb|AU096318.1|AU096318 AU096318 Rice green shoot Oryza sati... 117 1e-023
gb|CF277596.1|CF277596 14ETL--03-D06.g1 Rice etiolated leaf... 117 1e-023
gb|CF281459.1|CF281459 14ETL--08-I08.g1 Rice etiolated leaf... 117 1e-023
gb|CF311468.1|CF311468 ABF--06-L04.b1 ABF3-overexpressing t... 113 2e-022
gb|CF276538.1|CF276538 14ETL--01-L15.b1 Rice etiolated leaf... 111 9e-022
gb|CF277868.1|CF277868 14ETL--03-J01.b1 Rice etiolated leaf... 111 9e-022
gb|CF281717.1|CF281717 14ETL--08-O04.g1 Rice etiolated leaf... 111 9e-022
gb|CF310438.1|CF310438 ABF--05-B10.b1 ABF3-overexpressing t... 111 9e-022
gb|CF310877.1|CF310877 ABF--05-M16.b1 ABF3-overexpressing t... 111 9e-022
gb|AU082112.1|AU082112 AU082112 Rice panicle at flowering s... 109 3e-021
gb|AU056965.1|AU056965 AU056965 Oryza sativa mature leaf Ni... 107 1e-020
gb|AU082745.1|AU082745 AU082745 Rice mature leaf Oryza sati... 107 1e-020
gb|CF310948.1|CF310948 ABF--05-O14.b1 ABF3-overexpressing t... 105 5e-020
gb|CF277595.1|CF277595 14ETL--03-D06.b1 Rice etiolated leaf... 92 8e-016
gb|CF280049.1|CF280049 14ETL--06-J06.b1 Rice etiolated leaf... 92 8e-016
gb|CF276539.1|CF276539 14ETL--01-L15.g1 Rice etiolated leaf... 82 8e-013
gb|CF281716.1|CF281716 14ETL--08-O04.b1 Rice etiolated leaf... 82 8e-013
gb|CF310609.1|CF310609 ABF--05-F17.b1 ABF3-overexpressing t... 82 8e-013
gb|CF281458.1|CF281458 14ETL--08-I08.b1 Rice etiolated leaf... 78 1e-011
gb|CF277348.1|CF277348 14ETL--02-N14.b1 Rice etiolated leaf... 76 5e-011
gb|CV732267.1|CV732267 FLO--06-K18.g1 Rice flower lambda ph... 72 8e-010
gb|CF282330.1|CF282330 14ETL--09-M19.b1 Rice etiolated leaf... 70 3e-009
dbj|AK101475.1| Oryza sativa (japonica cultivar-group) cDNA... 70 3e-009
dbj|AK110261.1| Oryza sativa (japonica cultivar-group) cDNA... 70 3e-009
gb|AC137616.2| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|AACV01010846.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 70 3e-009
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
gb|C98575.1|C98575 C98575 Rice panicle at flowering stage O... 68 1e-008
gb|AU056947.1|AU056947 AU056947 Oryza sativa mature leaf Ni... 68 1e-008
gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (j... 68 1e-008
gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (j... 68 1e-008
gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (j... 68 1e-008
gb|CV733602.1|CV733602 FLO--08-J10.g1 Rice flower lambda ph... 68 1e-008
dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group)... 68 1e-008
dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 68 1e-008
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
emb|X56063.1|OSENDO O.sativa mRNA for endochitinase 68 1e-008
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|C73020.1|C73020 C73020 Rice panicle at flowering stage O... 66 5e-008
gb|CV732266.1|CV732266 FLO--06-K18.b1 Rice flower lambda ph... 66 5e-008
gb|CV733601.1|CV733601 FLO--08-J10.b1 Rice flower lambda ph... 66 5e-008
gb|CV734102.1|CV734102 FLO--09-F02.g1 Rice flower lambda ph... 66 5e-008
gb|CV734430.1|CV734430 FLO--09-M18.b1 Rice flower lambda ph... 66 5e-008
gb|AU082111.1|AU082111 AU082111 Rice panicle at flowering s... 62 7e-007
gb|AU083433.1|AU083433 AU083433 Rice panicle at flowering s... 62 7e-007
gb|AACV01010036.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|D47777.1|D47777 RICS13463A Rice green shoot Oryza sativa... 58 1e-005
dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group)... 58 1e-005
dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 58 1e-005
gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 ... 58 1e-005
gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA 58 1e-005
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase 52 7e-004
gb|CV729397.1|CV729397 FLO--02-E08.b1 Rice flower lambda ph... 50 0.003
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 50 0.003
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmCh... 48 0.011
gb|C19236.1|C19236 C19236 Rice panicle at ripening stage Or... 46 0.044
gb|CA756422.1|CA756422 BR030042000_PLATE_B01_2_010.ab1 OA O... 46 0.044
gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressin... 46 0.044
dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group)... 46 0.044
dbj|AK059871.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.044
dbj|AK063062.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.044
dbj|AK099355.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.044
gb|AACV01000748.1| Oryza sativa (japonica cultivar-group) c... 46 0.044
gb|AACV01005819.1| Oryza sativa (japonica cultivar-group) c... 46 0.044
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.044
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 46 0.044
ref|NM_183568.1| Oryza sativa (japonica cultivar-group), p... 46 0.044
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 46 0.044
dbj|AP002070.1| Oryza sativa (japonica cultivar-group) geno... 46 0.044
gb|AC140005.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.044
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.044
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.044
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.044
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.044
gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing... 44 0.17
>gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1135, mRNA sequence
Length = 700
Score = 222 bits (112), Expect = 3e-055
Identities = 297/358 (82%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 55 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 114
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 115 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 174
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 175 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 234
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| |||||| | |||||| ||||||||||| ||||||| | |||||||||
Sbjct: 235 ctacgggcctgcggggcagaacatcgggttcgacgggctgagggacccggacagggtggc 294
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||| | | | | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 295 gcaggacccgacgatctccttcaagacggcgctctggttctggatgaacaacgtgcacca 354
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||| || |||||||||||||||||||| | ||||||||||||| || |||||||||
Sbjct: 355 ggtgatgttgcaggggttcggcgccaccatccgggccatcaacggtgcgctcgagtgc 412
>dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia4a mRNA for chitinase,
complete cds
Length = 1067
Score = 222 bits (112), Expect = 3e-055
Identities = 297/358 (82%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 431 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 490
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 491 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 550
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 551 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 610
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| |||||| | |||||| ||||||||||| ||||||| | |||||||||
Sbjct: 611 ctacgggcctgcggggcagaacatcgggttcgacgggctgagggacccggacagggtggc 670
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||| | | | | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 671 gcaggacccgacgatctccttcaagacggcgctctggttctggatgaacaacgtgcacca 730
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||| || |||||||||||||||||||| | ||||||||||||| || |||||||||
Sbjct: 731 ggtgatgttgcaggggttcggcgccaccatccgggccatcaacggtgcgctcgagtgc 788
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 104 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 163
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 164 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 206
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 303 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 361
>dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F19, full
insert sequence
Length = 1083
Score = 222 bits (112), Expect = 3e-055
Identities = 297/358 (82%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 447 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 506
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 507 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 566
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 567 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 626
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| |||||| | |||||| ||||||||||| ||||||| | |||||||||
Sbjct: 627 ctacgggcctgcggggcagaacatcgggttcgacgggctgagggacccggacagggtggc 686
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||| | | | | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 687 gcaggacccgacgatctccttcaagacggcgctctggttctggatgaacaacgtgcacca 746
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||| || |||||||||||||||||||| | ||||||||||||| || |||||||||
Sbjct: 747 ggtgatgttgcaggggttcggcgccaccatccgggccatcaacggtgcgctcgagtgc 804
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 120 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 179
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 180 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 222
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 319 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 377
>dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C08, full
insert sequence
Length = 1022
Score = 222 bits (112), Expect = 3e-055
Identities = 297/358 (82%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 446 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 505
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 506 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 565
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 566 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 625
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| |||||| | |||||| ||||||||||| ||||||| | |||||||||
Sbjct: 626 ctacgggcctgcggggcagaacatcgggttcgacgggctgagggacccggacagggtggc 685
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||| | | | | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 686 gcaggacccgacgatctccttcaagacggcgctctggttctggatgaacaacgtgcacca 745
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||| || |||||||||||||||||||| | ||||||||||||| || |||||||||
Sbjct: 746 ggtgatgttgcaggggttcggcgccaccatccgggccatcaacggtgcgctcgagtgc 803
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 119 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 178
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 179 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 221
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 318 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 376
>dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G08, full
insert sequence
Length = 984
Score = 222 bits (112), Expect = 3e-055
Identities = 297/358 (82%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 446 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 505
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 506 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 565
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 566 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 625
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| |||||| | |||||| ||||||||||| ||||||| | |||||||||
Sbjct: 626 ctacgggcctgcggggcagaacatcgggttcgacgggctgagggacccggacagggtggc 685
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||| | | | | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 686 gcaggacccgacgatctccttcaagacggcgctctggttctggatgaacaacgtgcacca 745
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||| || |||||||||||||||||||| | ||||||||||||| || |||||||||
Sbjct: 746 ggtgatgttgcaggggttcggcgccaccatccgggccatcaacggtgcgctcgagtgc 803
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 119 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 178
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 179 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 221
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 318 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 376
>ref|XM_473013.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 867
Score = 222 bits (112), Expect = 3e-055
Identities = 297/358 (82%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 411 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 470
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 471 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 530
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 531 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 590
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| |||||| | |||||| ||||||||||| ||||||| | |||||||||
Sbjct: 591 ctacgggcctgcggggcagaacatcgggttcgacgggctgagggacccggacagggtggc 650
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||| | | | | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 651 gcaggacccgacgatctccttcaagacggcgctctggttctggatgaacaacgtgcacca 710
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||| || |||||||||||||||||||| | ||||||||||||| || |||||||||
Sbjct: 711 ggtgatgttgcaggggttcggcgccaccatccgggccatcaacggtgcgctcgagtgc 768
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 84 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 143
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 144 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 186
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 283 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 341
>gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010039, whole
genome shotgun sequence
Length = 18117
Score = 206 bits (104), Expect = 2e-050
Identities = 227/268 (84%)
Strand = Plus / Plus
Query: 537 ctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcg 596
|||||||||| || ||| | ||||||||||||| ||||| ||||||||||||||||
Sbjct: 1748 ctactgcgacaagaacaacaagcagtggccgtgccagccggggaagaagtactacgggcg 1807
Query: 597 cggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggctt 656
||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||
Sbjct: 1808 cgggccgctgcagatctcgtggaactacaactacgggcctgcggggcagaacatcgggtt 1867
Query: 657 cgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggc 716
||||||||| ||||||| | ||||||||||| |||| | | | | |||||| ||||
Sbjct: 1868 cgacgggctgagggacccggacagggtggcgcaggacccgacgatctccttcaagacggc 1927
Query: 717 gctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccac 776
|||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 1928 gctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcggcgccaccat 1987
Query: 777 cagggccatcaacggcgccctcgagtgc 804
| ||||||||||||| || |||||||||
Sbjct: 1988 ccgggccatcaacggtgcgctcgagtgc 2015
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 1243 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 1302
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 1303 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 1345
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 17849 cgccgccccggcggccgcgcagaactgcggctgccag 17885
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 1442 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 1500
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 206 bits (104), Expect = 2e-050
Identities = 227/268 (84%)
Strand = Plus / Minus
Query: 537 ctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcg 596
|||||||||| || ||| | ||||||||||||| ||||| ||||||||||||||||
Sbjct: 2288548 ctactgcgacaagaacaacaagcagtggccgtgccagccggggaagaagtactacgggcg 2288489
Query: 597 cggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggctt 656
||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||
Sbjct: 2288488 cgggccgctgcagatctcgtggaactacaactacgggcctgcggggcagaacatcgggtt 2288429
Query: 657 cgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggc 716
||||||||| ||||||| | ||||||||||| |||| | | | | |||||| ||||
Sbjct: 2288428 cgacgggctgagggacccggacagggtggcgcaggacccgacgatctccttcaagacggc 2288369
Query: 717 gctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccac 776
|||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 2288368 gctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcggcgccaccat 2288309
Query: 777 cagggccatcaacggcgccctcgagtgc 804
| ||||||||||||| || |||||||||
Sbjct: 2288308 ccgggccatcaacggtgcgctcgagtgc 2288281
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 2267650 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 2267591
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 2267590 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 2267531
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 2267530 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 2267471
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 2267470 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 2267411
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 2289053 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 2288994
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 2288993 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 2288951
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgc 170
|||||||||||| |||||||||||||||||||||
Sbjct: 2252291 cgccggcccggcggccgcgcagaactgcggctgc 2252258
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 2272448 cgccgccccggcggccgcgcagaactgcggctgccag 2272412
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 2268251 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 2268207
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 2288854 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 2288796
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 2268379 ttcttcaacgggatcaagaaccaggcc 2268353
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 206 bits (104), Expect = 2e-050
Identities = 227/268 (84%)
Strand = Plus / Minus
Query: 537 ctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcg 596
|||||||||| || ||| | ||||||||||||| ||||| ||||||||||||||||
Sbjct: 2579399 ctactgcgacaagaacaacaagcagtggccgtgccagccggggaagaagtactacgggcg 2579340
Query: 597 cggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggctt 656
||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||
Sbjct: 2579339 cgggccgctgcagatctcgtggaactacaactacgggcctgcggggcagaacatcgggtt 2579280
Query: 657 cgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggc 716
||||||||| ||||||| | ||||||||||| |||| | | | | |||||| ||||
Sbjct: 2579279 cgacgggctgagggacccggacagggtggcgcaggacccgacgatctccttcaagacggc 2579220
Query: 717 gctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccac 776
|||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 2579219 gctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcggcgccaccat 2579160
Query: 777 cagggccatcaacggcgccctcgagtgc 804
| ||||||||||||| || |||||||||
Sbjct: 2579159 ccgggccatcaacggtgcgctcgagtgc 2579132
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 2558128 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 2558069
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 2558068 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 2558009
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 2558008 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 2557949
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 2557948 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 2557889
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 2579904 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 2579845
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 2579844 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 2579802
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgc 170
|||||||||||| |||||||||||||||||||||
Sbjct: 2542593 cgccggcccggcggccgcgcagaactgcggctgc 2542560
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 2563298 cgccgccccggcggccgcgcagaactgcggctgccag 2563262
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 2558729 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 2558685
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 2579705 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 2579647
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 2558857 ttcttcaacgggatcaagaaccaggcc 2558831
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 206 bits (104), Expect = 2e-050
Identities = 227/268 (84%)
Strand = Plus / Minus
Query: 537 ctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcg 596
|||||||||| || ||| | ||||||||||||| ||||| ||||||||||||||||
Sbjct: 21723498 ctactgcgacaagaacaacaagcagtggccgtgccagccggggaagaagtactacgggcg 21723439
Query: 597 cggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggctt 656
||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||
Sbjct: 21723438 cgggccgctgcagatctcgtggaactacaactacgggcctgcggggcagaacatcgggtt 21723379
Query: 657 cgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggc 716
||||||||| ||||||| | ||||||||||| |||| | | | | |||||| ||||
Sbjct: 21723378 cgacgggctgagggacccggacagggtggcgcaggacccgacgatctccttcaagacggc 21723319
Query: 717 gctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccac 776
|||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 21723318 gctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcggcgccaccat 21723259
Query: 777 cagggccatcaacggcgccctcgagtgc 804
| ||||||||||||| || |||||||||
Sbjct: 21723258 ccgggccatcaacggtgcgctcgagtgc 21723231
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 21702227 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 21702168
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 21702167 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 21702108
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 21702107 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 21702048
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 21702047 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 21701988
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 21724003 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 21723944
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 21723943 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 21723901
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgc 170
|||||||||||| |||||||||||||||||||||
Sbjct: 21686692 cgccggcccggcggccgcgcagaactgcggctgc 21686659
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 21707397 cgccgccccggcggccgcgcagaactgcggctgccag 21707361
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 21702828 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 21702784
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 21723804 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 21723746
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 21702956 ttcttcaacgggatcaagaaccaggcc 21702930
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
complete sequence
Length = 133856
Score = 206 bits (104), Expect = 2e-050
Identities = 227/268 (84%)
Strand = Plus / Minus
Query: 537 ctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcg 596
|||||||||| || ||| | ||||||||||||| ||||| ||||||||||||||||
Sbjct: 74048 ctactgcgacaagaacaacaagcagtggccgtgccagccggggaagaagtactacgggcg 73989
Query: 597 cggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggctt 656
||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||
Sbjct: 73988 cgggccgctgcagatctcgtggaactacaactacgggcctgcggggcagaacatcgggtt 73929
Query: 657 cgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggc 716
||||||||| ||||||| | ||||||||||| |||| | | | | |||||| ||||
Sbjct: 73928 cgacgggctgagggacccggacagggtggcgcaggacccgacgatctccttcaagacggc 73869
Query: 717 gctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccac 776
|||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 73868 gctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcggcgccaccat 73809
Query: 777 cagggccatcaacggcgccctcgagtgc 804
| ||||||||||||| || |||||||||
Sbjct: 73808 ccgggccatcaacggtgcgctcgagtgc 73781
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 53150 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 53091
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 53090 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 53031
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 53030 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 52971
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 52970 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 52911
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 74553 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 74494
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 74493 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 74451
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgc 170
|||||||||||| |||||||||||||||||||||
Sbjct: 37791 cgccggcccggcggccgcgcagaactgcggctgc 37758
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 57948 cgccgccccggcggccgcgcagaactgcggctgccag 57912
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 53751 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 53707
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 74354 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 74296
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 53879 ttcttcaacgggatcaagaaccaggcc 53853
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 206 bits (104), Expect = 2e-050
Identities = 227/268 (84%)
Strand = Plus / Minus
Query: 537 ctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcg 596
|||||||||| || ||| | ||||||||||||| ||||| ||||||||||||||||
Sbjct: 24684525 ctactgcgacaagaacaacaagcagtggccgtgccagccggggaagaagtactacgggcg 24684466
Query: 597 cggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggctt 656
||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| ||
Sbjct: 24684465 cgggccgctgcagatctcgtggaactacaactacgggcctgcggggcagaacatcgggtt 24684406
Query: 657 cgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggc 716
||||||||| ||||||| | ||||||||||| |||| | | | | |||||| ||||
Sbjct: 24684405 cgacgggctgagggacccggacagggtggcgcaggacccgacgatctccttcaagacggc 24684346
Query: 717 gctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccac 776
|||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 24684345 gctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcggcgccaccat 24684286
Query: 777 cagggccatcaacggcgccctcgagtgc 804
| ||||||||||||| || |||||||||
Sbjct: 24684285 ccgggccatcaacggtgcgctcgagtgc 24684258
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 24663627 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 24663568
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 24663567 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 24663508
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 24663507 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 24663448
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 24663447 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 24663388
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 24685030 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 24684971
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 24684970 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 24684928
Score = 60.0 bits (30), Expect = 3e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgc 170
|||||||||||| |||||||||||||||||||||
Sbjct: 24648268 cgccggcccggcggccgcgcagaactgcggctgc 24648235
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 24668425 cgccgccccggcggccgcgcagaactgcggctgccag 24668389
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 24664228 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 24664184
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 24684831 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 24684773
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 24664356 ttcttcaacgggatcaagaaccaggcc 24664330
>gb|CF311469.1|CF311469 ABF--06-L04.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-L04, mRNA sequence
Length = 510
Score = 192 bits (97), Expect = 3e-046
Identities = 190/221 (85%)
Strand = Plus / Minus
Query: 584 agtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgggga 643
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 510 agtactacgggcgcgggccgctgcagatctcgtggaactacaactacgggcctgcggggc 451
Query: 644 gggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtgg 703
| |||||| ||||||||||| ||||||| | ||||||||||| |||| | | |
Sbjct: 450 agaacatcgggttcgacgggctgagggacccggacagggtggcgcaggacccgacgatct 391
Query: 704 cgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggt 763
| |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||
Sbjct: 390 ccttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggt 331
Query: 764 tcggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||||||||||| | ||||||||||||| || |||||||||
Sbjct: 330 tcggcgccaccatccgggccatcaacggtgcgctcgagtgc 290
>gb|CB654174.1|CB654174 OSJNEc05O21.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05O21 3', mRNA sequence
Length = 632
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 597 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 538
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 537 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 478
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 477 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 418
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 417 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 358
>dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase IIb,
complete cds
Length = 1036
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 432 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 491
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 492 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 551
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 552 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 611
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 612 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 671
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 298 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 357
Query: 510 catca 514
|||||
Sbjct: 358 catca 362
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 170 ttcttcaacgggatcaagaaccaggcc 196
>dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4 gene for PR-3 class IV
chitinase, complete cds
Length = 2172
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 1672 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 1731
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 1732 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 1791
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 1792 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 1851
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 1852 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 1911
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 1071 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 1115
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 943 ttcttcaacgggatcaagaaccaggcc 969
>dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H09, full
insert sequence
Length = 1078
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 442 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 501
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 502 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 561
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 562 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 621
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 622 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 681
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 308 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 367
Query: 510 catca 514
|||||
Sbjct: 368 catca 372
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 180 ttcttcaacgggatcaagaaccaggcc 206
>dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128C09, full
insert sequence
Length = 1059
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 443 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 502
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 503 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 562
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 563 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 622
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 623 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 682
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 309 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 368
Query: 510 catca 514
|||||
Sbjct: 369 catca 373
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 181 ttcttcaacgggatcaagaaccaggcc 207
>gb|AACV01010037.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010037, whole
genome shotgun sequence
Length = 7641
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 4123 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 4182
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 4183 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 4242
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 4243 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 4302
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 4303 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 4362
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 3522 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 3566
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 3394 ttcttcaacgggatcaagaaccaggcc 3420
>ref|XM_473009.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 858
Score = 167 bits (84), Expect = 2e-038
Identities = 201/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 536 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 595
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 596 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 655
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||||
Sbjct: 656 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcagg 715
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 716 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 775
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 402 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 461
Query: 510 catca 514
|||||
Sbjct: 462 catca 466
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 137 cgccggcccggccgccgcgcagaactgcggctgccag 173
||||| |||||| ||||||||||||||||||||||||
Sbjct: 63 cgccgccccggcggccgcgcagaactgcggctgccag 99
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 274 ttcttcaacgggatcaagaaccaggcc 300
>gb|CB683115.1|CB683115 OSJNEf11B13.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11B13 5', mRNA sequence
Length = 862
Score = 159 bits (80), Expect = 4e-036
Identities = 200/240 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 407 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 466
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 467 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 526
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| ||| || ||||||
Sbjct: 527 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaagtgatgtcgcagg 586
Query: 761 ggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 587 ggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 646
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 273 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 332
Query: 510 catca 514
|||||
Sbjct: 333 catca 337
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 145 ttcttcaacgggatcaagaaccaggcc 171
>gb|AU090552.1|AU090552 AU090552 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2747, mRNA sequence
Length = 710
Score = 149 bits (75), Expect = 4e-033
Identities = 201/242 (83%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 77 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 136
Query: 641 ggagggccatcggcttcg--acgggctcggggaccccggcagggtggcgcgggacgccgt 698
| | | |||||| |||| ||||||| ||||||| | || |||||||| |||| |
Sbjct: 137 gaaagaacatcgggttcggaacgggctaagggacccagacaaggtggcgcaggacccgac 196
Query: 699 ggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgca 758
| | |||||| |||||||||||||||||||||||| ||||||| |||| || ||||
Sbjct: 197 aatctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgca 256
Query: 759 ggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccc 818
|||||| |||||||||| | ||||||||||||| || ||||||||| |||||| |||||
Sbjct: 257 ggggtttggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccc 316
Query: 819 cg 820
||
Sbjct: 317 cg 318
>gb|CA754096.1|CA754096 BR040009000_PLATE_C03_19_020.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040009000_PLATE_C03_19_020.ab1 similar to (AF402937)
chitinase-B [Saccharum officinarum], mRNA sequence
Length = 548
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Plus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 18 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 77
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 78 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 137
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 138 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 197
Query: 738 cgtgcacg 745
||||||||
Sbjct: 198 cgtgcacg 205
Score = 65.9 bits (33), Expect = 5e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcg 805
||||||||||||||||||| | | |||||||||||||| ||||||||||
Sbjct: 223 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcg 271
Score = 56.0 bits (28), Expect = 5e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 835 cgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctc 894
||||||| ||||||| ||||| ||||| ||| |||||||||||||||| |||||||
Sbjct: 301 cgcgtcgcctactaccagcagttctgccagcagttcggcgtcgaccccggcagcaacctc 360
Query: 895 acctgcta 902
||||||||
Sbjct: 361 acctgcta 368
>dbj|AP005001.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0043C06, ***
SEQUENCING IN PROGRESS ***
Length = 159465
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 64716 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 64657
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 64656 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 64597
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 64596 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 64537
Query: 738 cgtgcacg 745
||||||||
Sbjct: 64536 cgtgcacg 64529
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 64511 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 64452
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 64451 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 64392
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 64391 gaccccggcagcaacctcacctgcta 64366
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 64916 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 64871
>dbj|AK064754.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G01, full
insert sequence
Length = 976
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Plus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 514 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 573
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 574 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 633
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 634 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 693
Query: 738 cgtgcacg 745
||||||||
Sbjct: 694 cgtgcacg 701
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 719 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 778
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 779 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 838
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 839 gaccccggcagcaacctcacctgcta 864
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 403 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 448
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1058_F07
Length = 95841
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 73484 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 73425
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 73424 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 73365
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 73364 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 73305
Query: 738 cgtgcacg 745
||||||||
Sbjct: 73304 cgtgcacg 73297
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 73279 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 73220
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 73219 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 73160
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 73159 gaccccggcagcaacctcacctgcta 73134
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 73684 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 73639
>gb|AACV01004867.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004867, whole
genome shotgun sequence
Length = 60967
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Plus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 54990 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 55049
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 55050 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 55109
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 55110 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 55169
Query: 738 cgtgcacg 745
||||||||
Sbjct: 55170 cgtgcacg 55177
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 55195 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 55254
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 55255 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 55314
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 55315 gaccccggcagcaacctcacctgcta 55340
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 54790 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 54835
>ref|XM_466626.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 976
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Plus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 514 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 573
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 574 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 633
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 634 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 693
Query: 738 cgtgcacg 745
||||||||
Sbjct: 694 cgtgcacg 701
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 719 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 778
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 779 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 838
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 839 gaccccggcagcaacctcacctgcta 864
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 403 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 448
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 4947142 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 4947083
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 4947082 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 4947023
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 4947022 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 4946963
Query: 738 cgtgcacg 745
||||||||
Sbjct: 4946962 cgtgcacg 4946955
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 4946937 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 4946878
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 4946877 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 4946818
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 4946817 gaccccggcagcaacctcacctgcta 4946792
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 4947342 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 4947297
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 10048734 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 10048675
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 10048674 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 10048615
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 10048614 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 10048555
Query: 738 cgtgcacg 745
||||||||
Sbjct: 10048554 cgtgcacg 10048547
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 10048529 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 10048470
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 10048469 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 10048410
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 10048409 gaccccggcagcaacctcacctgcta 10048384
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 10048934 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 10048889
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 23501798 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 23501739
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 23501738 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 23501679
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 23501678 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 23501619
Query: 738 cgtgcacg 745
||||||||
Sbjct: 23501618 cgtgcacg 23501611
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 23501593 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 23501534
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 23501533 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 23501474
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 23501473 gaccccggcagcaacctcacctgcta 23501448
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 23501998 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 23501953
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 127 bits (64), Expect = 1e-026
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 23762900 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 23762841
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || ||||| |
Sbjct: 23762840 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgacccgga 23762781
Query: 678 cagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacag 737
| ||||||| || | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 23762780 cgcggtggcgaggagccccgtgctggcgttccagacggcgctctggtactggaccaacaa 23762721
Query: 738 cgtgcacg 745
||||||||
Sbjct: 23762720 cgtgcacg 23762713
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 23762695 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 23762636
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 23762635 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 23762576
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 23762575 gaccccggcagcaacctcacctgcta 23762550
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 23763100 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 23763055
>gb|C19108.1|C19108 C19108 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S12594_5A, mRNA sequence
Length = 632
Score = 119 bits (60), Expect = 4e-024
Identities = 159/192 (82%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 432 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 491
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 492 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 551
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcagg 760
| | |||||| |||||||||||||||||||||||| ||||||| |||| || |||| |
Sbjct: 552 tctctttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaag 611
Query: 761 ggttcggcgcca 772
|||| |||||||
Sbjct: 612 ggtttggcgcca 623
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 298 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 357
Query: 510 catca 514
|||||
Sbjct: 358 catca 362
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 170 ttcttcaacgggatcaagaaccaggcc 196
>gb|AU089729.1|AU089729 AU089729 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12594, mRNA sequence
Length = 530
Score = 117 bits (59), Expect = 1e-023
Identities = 101/115 (87%)
Strand = Plus / Plus
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttc 765
|||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||
Sbjct: 35 ttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggttt 94
Query: 766 ggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 95 ggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 149
>gb|AU096318.1|AU096318 AU096318 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13463, mRNA sequence
Length = 855
Score = 117 bits (59), Expect = 1e-023
Identities = 101/115 (87%)
Strand = Plus / Plus
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttc 765
|||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||
Sbjct: 360 ttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggttt 419
Query: 766 ggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 420 ggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 474
>gb|CF277596.1|CF277596 14ETL--03-D06.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-D06, mRNA sequence
Length = 550
Score = 117 bits (59), Expect = 1e-023
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttc 765
|||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||
Sbjct: 505 ttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggttt 446
Query: 766 ggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 445 ggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 391
>gb|CF281459.1|CF281459 14ETL--08-I08.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-I08, mRNA sequence
Length = 539
Score = 117 bits (59), Expect = 1e-023
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttc 765
|||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||
Sbjct: 507 ttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggttt 448
Query: 766 ggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||||||||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 447 ggcgccaccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 393
>gb|CF311468.1|CF311468 ABF--06-L04.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-L04, mRNA sequence
Length = 646
Score = 113 bits (57), Expect = 2e-022
Identities = 152/183 (83%), Gaps = 3/183 (1%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
|||||| |||||||| |||||||| || |||| ||| || |||||||| ||| | |||||
Sbjct: 464 caagcgtgagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgcta 523
Query: 510 catcagcgagatcaacaag---agcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||| |||||| ||| | |||| | |||||||||| || ||| | |||||||||
Sbjct: 524 catcaacgagataaacggggcgagcatggactactgcgacaagaacaacaagcagtggcc 583
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 584 gtgccagccggggaagaagtactacgggcgcgggccgctgcagatctcgtggaactacaa 643
Query: 627 cta 629
|||
Sbjct: 644 cta 646
Score = 61.9 bits (31), Expect = 7e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 152 cgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcac 211
|||||||||||||||||||||| | ||| | ||||||||||| | || |||||||||||
Sbjct: 137 cgcgcagaactgcggctgccagtcgaacatgtgctgcagcaaatgggggtactgcggcac 196
Query: 212 gaccgacgagtactgcggcgacgggtgccagtcgggcccgtgc 254
| | | || |||||||| || ||||||| || |||||||||
Sbjct: 197 gggcaaggactactgcggagatgggtgccgctctggcccgtgc 239
Score = 46.1 bits (23), Expect = 0.044
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacac 380
|||||||| || ||||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 336 ttcttcaatgggatcaagaaccaggccccgaacggttgcgccggcaagaacttttacac 394
>gb|CF276538.1|CF276538 14ETL--01-L15.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-L15, mRNA sequence
Length = 510
Score = 111 bits (56), Expect = 9e-022
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttc 765
|||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||
Sbjct: 508 ttcaagacggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggttt 449
Query: 766 ggcgccacca-ccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
|||||||||| || ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 448 ggcgccaccatccggggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 393
>gb|CF277868.1|CF277868 14ETL--03-J01.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-J01, mRNA sequence
Length = 606
Score = 111 bits (56), Expect = 9e-022
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 442 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 501
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 502 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 561
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcac 744
| | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 562 tctctttcaagacggcgctctggttctggatgaacaacgtgcac 605
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 308 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 367
Query: 510 catca 514
|||||
Sbjct: 368 catca 372
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 323 tcttcaacggcatcaagaaccaggcc 348
|||||||||| |||||||||||||||
Sbjct: 181 tcttcaacgggatcaagaaccaggcc 206
>gb|CF281717.1|CF281717 14ETL--08-O04.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-O04, mRNA sequence
Length = 562
Score = 111 bits (56), Expect = 9e-022
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 713 cggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgcca 772
|||||||||||||||||||||||| ||||||| |||| || |||||||||| |||||||
Sbjct: 506 cggcgctctggttctggatgaacaacgtgcaccaggtgatgtcgcaggggtttggcgcca 447
Query: 773 ccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccg 820
||| | ||||||||||||| || ||||||||| |||||| |||||||
Sbjct: 446 ccatccgggccatcaacggtgcgctcgagtgcaacgggaagaaccccg 399
>gb|CF310438.1|CF310438 ABF--05-B10.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-B10, mRNA sequence
Length = 605
Score = 111 bits (56), Expect = 9e-022
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 441 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 500
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 501 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 560
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcac 744
| | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 561 tctctttcaagacggcgctctggttctggatgaacaacgtgcac 604
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 307 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 366
Query: 510 catca 514
|||||
Sbjct: 367 catca 371
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 179 ttcttcaacgggatcaagaaccaggcc 205
>gb|CF310877.1|CF310877 ABF--05-M16.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-M16, mRNA sequence
Length = 612
Score = 111 bits (56), Expect = 9e-022
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 448 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 507
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtgg 700
| | | |||||| ||||||||||| ||||||| | || |||||||| |||| |
Sbjct: 508 gaaagaacatcgggttcgacgggctaagggacccagacaaggtggcgcaggacccgacaa 567
Query: 701 tggcgttcaaggcggcgctctggttctggatgaacagcgtgcac 744
| | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 568 tctctttcaagacggcgctctggttctggatgaacaacgtgcac 611
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 314 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 373
Query: 510 catca 514
|||||
Sbjct: 374 catca 378
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 186 ttcttcaacgggatcaagaaccaggcc 212
>gb|AU082112.1|AU082112 AU082112 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1745, mRNA sequence
Length = 474
Score = 109 bits (55), Expect = 3e-021
Identities = 131/157 (83%)
Strand = Plus / Plus
Query: 648 catcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgtt 707
|||||| ||||||||||| ||||||| | ||||||||||| |||| | | | | ||
Sbjct: 31 catcgggttcgacgggctgagggacccggacagggtggcgcaggacccgacgatctcctt 90
Query: 708 caaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcgg 767
|||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||||
Sbjct: 91 caagacggcgctctggttctggatgaacaacgtgcaccaggtgatgttgcaggggttcgg 150
Query: 768 cgccaccaccagggccatcaacggcgccctcgagtgc 804
|||||||| | ||||||||||| | || |||||||||
Sbjct: 151 cgccaccanccgggccatcaacngtgcgctcgagtgc 187
>gb|AU056965.1|AU056965 AU056965 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21023_2Z, mRNA sequence
Length = 529
Score = 107 bits (54), Expect = 1e-020
Identities = 120/142 (84%)
Strand = Plus / Plus
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
||||||||||| |||||||||||||||||||||| |||||||||||| |||||| | |
Sbjct: 103 tacgggcgcgggccgctgcagatctcgtggaacttcaactacgggccggcggggcagagc 162
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttc 708
||||| ||||||||||| || ||||| | | ||||||| || | ||||| ||||||||
Sbjct: 163 atcgggttcgacgggctgggcgacccggacgcggtggcgaggagccccgtgctggcgttc 222
Query: 709 aaggcggcgctctggttctgga 730
|| |||||||||||| |||||
Sbjct: 223 cagacggcgctctggtactgga 244
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 757 caggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaac 816
||||||||||||||||||| | | |||||||||||||| |||||||||| ||| || |||
Sbjct: 278 caggggttcggcgccaccatccgcgccatcaacggcgcgctcgagtgcgacggcaagaac 337
Query: 817 cccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtc 876
||| || | | | ||||||| ||||||| ||||| ||||| ||| ||||||||
Sbjct: 338 cccaccgccgtcagcaaccgcgtcgcctactaccagcagttctgccagcagttcggcgtc 397
Query: 877 gaccccgggcccaacctcacctgcta 902
|||||||| |||||||||||||||
Sbjct: 398 gaccccggcagcaacctcacctgcta 423
>gb|AU082745.1|AU082745 AU082745 Rice mature leaf Oryza sativa (japonica cultivar-group)
cDNA clone S21009, mRNA sequence
Length = 708
Score = 107 bits (54), Expect = 1e-020
Identities = 157/189 (83%), Gaps = 2/189 (1%)
Strand = Plus / Plus
Query: 558 gcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtg 617
||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 494 gcagtggccgtgcatggcggggaaggggtactacgggcgcgggccgctgcagatctcgtg 553
Query: 618 gaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccgg 677
||||| |||||||||||| |||||| | |||||| ||||||||||| || || || |
Sbjct: 554 gaacttcaactacgggccggcggggcagagcatcgggttcgacgggctgggcgaaccgga 613
Query: 678 cagggtggcgcggga-cgccgtggtggcgttcaaggcggcgctctggttctggatgaaca 736
| ||||||| ||| | ||||| |||||||| || |||||||||||| ||||| ||||
Sbjct: 614 cgcggtggcgaaggagccccgtgctggcgttc-agacggcgctctggtactggancaaca 672
Query: 737 gcgtgcacg 745
||||||||
Sbjct: 673 acgtgcacg 681
Score = 67.9 bits (34), Expect = 1e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagacc 495
||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 383 caagcgcgagatcgccgccttcttcgcccacgccaaccacgagacc 428
>gb|CF310948.1|CF310948 ABF--05-O14.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-O14, mRNA sequence
Length = 613
Score = 105 bits (53), Expect = 5e-020
Identities = 138/165 (83%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 448 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 507
Query: 641 ggagggccatcggcttcgacgggctcggggaccccggc-agggtggcgcgggacgccgtg 699
| | | |||||| ||||||||||| ||||||| | | |||||||||| |||| |
Sbjct: 508 gaaagaacatcgggttcgacgggctaagggacccagacaagggtggcgcaggacccgaca 567
Query: 700 gtggcgttcaaggcggcgctctggttctggatgaacagcgtgcac 744
| | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 568 atctctttcaagacggcgctctggttctggatgaacaacgtgcac 612
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 314 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 373
Query: 510 catca 514
|||||
Sbjct: 374 catca 378
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 186 ttcttcaacgggatcaagaaccaggcc 212
>gb|CF277595.1|CF277595 14ETL--03-D06.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-D06, mRNA sequence
Length = 641
Score = 91.7 bits (46), Expect = 8e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 476 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 535
Query: 641 ggagggccatcggcttcgacgggctcggggaccc 674
| | | |||||| ||||||||||| |||||||
Sbjct: 536 gaaagaacatcgggttcgacgggctaagggaccc 569
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 342 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 401
Query: 510 catca 514
|||||
Sbjct: 402 catca 406
Score = 61.9 bits (31), Expect = 7e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcac 744
|||||| |||||||||||||||||||||||| |||||||
Sbjct: 602 ttcaagacggcgctctggttctggatgaacaacgtgcac 640
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 214 ttcttcaacgggatcaagaaccaggcc 240
>gb|CF280049.1|CF280049 14ETL--06-J06.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-J06, mRNA sequence
Length = 580
Score = 91.7 bits (46), Expect = 8e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 448 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 507
Query: 641 ggagggccatcggcttcgacgggctcggggaccc 674
| | | |||||| ||||||||||| |||||||
Sbjct: 508 gaaagaacatcggtttcgacgggctaagggaccc 541
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagac 494
||||||||||||||| |||||||||||||| | ||| ||||||||
Sbjct: 314 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagac 358
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 186 ttcttcaacgggatcaagaaccaggcc 212
>gb|CF276539.1|CF276539 14ETL--01-L15.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-L15, mRNA sequence
Length = 511
Score = 81.8 bits (41), Expect = 8e-013
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 581 agaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcgg 640
||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 448 agaagtactacggacgcgggccgctgcagatctcatggaacttcaactacgggccggcgg 507
Query: 641 g 641
|
Sbjct: 508 g 508
Score = 65.9 bits (33), Expect = 5e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 450 caagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgcta 509
||||||||||||||| |||||||||||||| | ||| |||||||| || ||| | |||||
Sbjct: 314 caagcgcgagatcgctgccttcttcgcgcatgtcacacacgagactggacatatgtgcta 373
Query: 510 catca 514
|||||
Sbjct: 374 catca 378
Score = 46.1 bits (23), Expect = 0.044
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggcc 348
||||||||||| |||||||||||||||
Sbjct: 186 ttcttcaacgggatcaagaaccaggcc 212
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,500,528
Number of Sequences: 438736
Number of extensions: 1500528
Number of successful extensions: 11635
Number of sequences better than 0.5: 132
Number of HSP's better than 0.5 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10513
Number of HSP's gapped (non-prelim): 1080
length of query: 1186
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1165
effective length of database: 2,791,206,460
effective search space: 3251755525900
effective search space used: 3251755525900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)