BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.1
(1225 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering s... 293 1e-076
dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia... 293 1e-076
dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA... 293 1e-076
dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA... 293 1e-076
dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA... 293 1e-076
ref|XM_473013.1| Oryza sativa (japonica cultivar-group), p... 293 1e-076
gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) c... 262 4e-067
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 262 4e-067
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 262 4e-067
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 262 4e-067
emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromoso... 262 4e-067
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 262 4e-067
gb|CF311469.1|CF311469 ABF--06-L04.g1 ABF3-overexpressing t... 232 4e-058
gb|CB683115.1|CB683115 OSJNEf11B13.f OSJNEf Oryza sativa (j... 214 8e-053
dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA... 214 8e-053
dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4... 214 8e-053
dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA... 214 8e-053
dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA... 214 8e-053
gb|AACV01010037.1| Oryza sativa (japonica cultivar-group) c... 214 8e-053
ref|XM_473009.1| Oryza sativa (japonica cultivar-group), p... 214 8e-053
gb|CB654174.1|CB654174 OSJNEc05O21.r OSJNEc Oryza sativa (j... 206 2e-050
gb|AU090552.1|AU090552 AU090552 Rice panicle at flowering s... 198 5e-048
gb|AU089729.1|AU089729 AU089729 Rice green shoot Oryza sati... 157 2e-035
gb|AU096318.1|AU096318 AU096318 Rice green shoot Oryza sati... 157 2e-035
gb|CF277596.1|CF277596 14ETL--03-D06.g1 Rice etiolated leaf... 157 2e-035
gb|CF281459.1|CF281459 14ETL--08-I08.g1 Rice etiolated leaf... 157 2e-035
gb|CF281717.1|CF281717 14ETL--08-O04.g1 Rice etiolated leaf... 149 4e-033
gb|AU082112.1|AU082112 AU082112 Rice panicle at flowering s... 147 2e-032
gb|C19108.1|C19108 C19108 Rice green shoot Oryza sativa (ja... 145 7e-032
gb|CF311468.1|CF311468 ABF--06-L04.b1 ABF3-overexpressing t... 145 7e-032
gb|CF276538.1|CF276538 14ETL--01-L15.b1 Rice etiolated leaf... 143 3e-031
gb|CF277868.1|CF277868 14ETL--03-J01.b1 Rice etiolated leaf... 137 2e-029
gb|CF310438.1|CF310438 ABF--05-B10.b1 ABF3-overexpressing t... 137 2e-029
ref|XM_466626.1| Oryza sativa (japonica cultivar-group), mRNA 137 2e-029
gb|CF310877.1|CF310877 ABF--05-M16.b1 ABF3-overexpressing t... 133 2e-028
gb|AU082745.1|AU082745 AU082745 Rice mature leaf Oryza sati... 131 1e-027
gb|CF310948.1|CF310948 ABF--05-O14.b1 ABF3-overexpressing t... 131 1e-027
dbj|AP005001.1| Oryza sativa (japonica cultivar-group) chro... 121 9e-025
dbj|AP004111.3| Oryza sativa (japonica cultivar-group) geno... 121 9e-025
gb|AACV01004867.1| Oryza sativa (japonica cultivar-group) c... 121 9e-025
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 121 9e-025
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 121 9e-025
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 121 9e-025
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 121 9e-025
gb|CA754096.1|CA754096 BR040009000_PLATE_C03_19_020.ab1 OA ... 119 4e-024
dbj|AK064754.1| Oryza sativa (japonica cultivar-group) cDNA... 119 4e-024
gb|CV732267.1|CV732267 FLO--06-K18.g1 Rice flower lambda ph... 103 2e-019
gb|AU056965.1|AU056965 AU056965 Oryza sativa mature leaf Ni... 101 9e-019
gb|CF277595.1|CF277595 14ETL--03-D06.b1 Rice etiolated leaf... 90 3e-015
gb|CF280049.1|CF280049 14ETL--06-J06.b1 Rice etiolated leaf... 90 3e-015
gb|CF276539.1|CF276539 14ETL--01-L15.g1 Rice etiolated leaf... 86 5e-014
gb|CF281458.1|CF281458 14ETL--08-I08.b1 Rice etiolated leaf... 86 5e-014
gb|CF281716.1|CF281716 14ETL--08-O04.b1 Rice etiolated leaf... 86 5e-014
gb|CF310609.1|CF310609 ABF--05-F17.b1 ABF3-overexpressing t... 86 5e-014
gb|CV733602.1|CV733602 FLO--08-J10.g1 Rice flower lambda ph... 84 2e-013
gb|C73020.1|C73020 C73020 Rice panicle at flowering stage O... 82 8e-013
gb|CF277348.1|CF277348 14ETL--02-N14.b1 Rice etiolated leaf... 82 8e-013
gb|CF282330.1|CF282330 14ETL--09-M19.b1 Rice etiolated leaf... 82 8e-013
gb|CV732266.1|CV732266 FLO--06-K18.b1 Rice flower lambda ph... 82 8e-013
gb|CV733601.1|CV733601 FLO--08-J10.b1 Rice flower lambda ph... 82 8e-013
gb|CV734102.1|CV734102 FLO--09-F02.g1 Rice flower lambda ph... 82 8e-013
gb|CV734430.1|CV734430 FLO--09-M18.b1 Rice flower lambda ph... 82 8e-013
gb|D47777.1|D47777 RICS13463A Rice green shoot Oryza sativa... 74 2e-010
gb|AU082111.1|AU082111 AU082111 Rice panicle at flowering s... 70 3e-009
gb|AU083433.1|AU083433 AU083433 Rice panicle at flowering s... 70 3e-009
gb|AU056947.1|AU056947 AU056947 Oryza sativa mature leaf Ni... 68 1e-008
gb|AACV01010036.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|C19236.1|C19236 C19236 Rice panicle at ripening stage Or... 62 8e-007
gb|CV729397.1|CV729397 FLO--02-E08.b1 Rice flower lambda ph... 62 8e-007
dbj|AK101475.1| Oryza sativa (japonica cultivar-group) cDNA... 62 8e-007
dbj|AK110261.1| Oryza sativa (japonica cultivar-group) cDNA... 62 8e-007
gb|AC137616.2| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|AACV01010846.1| Oryza sativa (japonica cultivar-group) c... 62 8e-007
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 62 8e-007
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 62 8e-007
gb|CA756422.1|CA756422 BR030042000_PLATE_B01_2_010.ab1 OA O... 52 7e-004
dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group)... 52 7e-004
dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 52 7e-004
gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 ... 52 7e-004
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA 52 7e-004
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 52 7e-004
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 52 7e-004
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase 52 7e-004
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|AQ287446.1|AQ287446 nbxb0030E24f CUGI Rice BAC Library O... 48 0.011
gb|C98575.1|C98575 C98575 Rice panicle at flowering stage O... 48 0.011
gb|AU077767.1|AU077767 AU077767 Rice cDNA from young root O... 48 0.011
gb|AU097550.1|AU097550 AU097550 Rice shoot Oryza sativa (ja... 48 0.011
gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (j... 48 0.011
gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (j... 48 0.011
gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (j... 48 0.011
gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressin... 48 0.011
gb|CF324345.1|CF324345 HDN--06-E15.g1 OsHDAC1-overexpressin... 48 0.011
gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing... 48 0.011
dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group)... 48 0.011
dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group)... 48 0.011
dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.011
dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.011
dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.011
dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.011
dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.011
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 48 0.011
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 48 0.011
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 48 0.011
gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) c... 48 0.011
gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) c... 48 0.011
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.011
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.011
emb|X56063.1|OSENDO O.sativa mRNA for endochitinase 48 0.011
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 48 0.011
gb|BP185058.1|BP185058 BP185058 pNS rice panicle cDNA, flow... 46 0.045
dbj|AK063062.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.045
dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.045
gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmCh... 46 0.045
gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11... 46 0.045
gb|AACV01000748.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
gb|AACV01022031.1| Oryza sativa (japonica cultivar-group) c... 46 0.045
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.045
ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chi... 46 0.045
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 46 0.045
ref|NM_183568.1| Oryza sativa (japonica cultivar-group), p... 46 0.045
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 46 0.045
dbj|AP002070.1| Oryza sativa (japonica cultivar-group) geno... 46 0.045
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.045
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.045
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.045
gb|AU029707.1|AU029707 AU029707 Rice panicle shorter than 3... 44 0.18
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 44 0.18
dbj|AP004803.2| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP005760.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AACV01014722.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01022034.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
ref|NM_197598.1| Oryza sativa (japonica cultivar-group) put... 44 0.18
>gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1135, mRNA sequence
Length = 700
Score = 293 bits (148), Expect = 1e-076
Identities = 318/374 (85%), Gaps = 3/374 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 428 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 369
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 368 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 309
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 308 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 249
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 248 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 189
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgt 688
||||| | ||||||||||||| ||||| || |||||||||| | |||| | ||
Sbjct: 188 tccccggctggcacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgt 129
Query: 689 tgatctcgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcgg 748
| |||||| |||||||||| | |||||||||||| || |||||||| || |||||||| |
Sbjct: 128 ttatctcgttgatgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcag 69
Query: 749 cgatctcgcgcttg 762
||||||| ||||||
Sbjct: 68 cgatctcacgcttg 55
>dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia4a mRNA for chitinase,
complete cds
Length = 1067
Score = 293 bits (148), Expect = 1e-076
Identities = 318/374 (85%), Gaps = 3/374 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 804 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 745
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 744 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 685
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 684 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 625
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 565
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgt 688
||||| | ||||||||||||| ||||| || |||||||||| | |||| | ||
Sbjct: 564 tccccggctggcacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgt 505
Query: 689 tgatctcgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcgg 748
| |||||| |||||||||| | |||||||||||| || |||||||| || |||||||| |
Sbjct: 504 ttatctcgttgatgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcag 445
Query: 749 cgatctcgcgcttg 762
||||||| ||||||
Sbjct: 444 cgatctcacgcttg 431
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 206 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 147
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 146 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 104
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 361 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 302
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 301 gcctcggtgaccacg 287
>dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F19, full
insert sequence
Length = 1083
Score = 293 bits (148), Expect = 1e-076
Identities = 318/374 (85%), Gaps = 3/374 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 820 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 761
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 760 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 701
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 700 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 641
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 640 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 581
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgt 688
||||| | ||||||||||||| ||||| || |||||||||| | |||| | ||
Sbjct: 580 tccccggctggcacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgt 521
Query: 689 tgatctcgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcgg 748
| |||||| |||||||||| | |||||||||||| || |||||||| || |||||||| |
Sbjct: 520 ttatctcgttgatgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcag 461
Query: 749 cgatctcgcgcttg 762
||||||| ||||||
Sbjct: 460 cgatctcacgcttg 447
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 222 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 163
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 162 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 120
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 377 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 318
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 317 gcctcggtgaccacg 303
>dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C08, full
insert sequence
Length = 1022
Score = 293 bits (148), Expect = 1e-076
Identities = 318/374 (85%), Gaps = 3/374 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 819 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 760
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 759 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 700
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 699 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 640
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 639 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 580
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgt 688
||||| | ||||||||||||| ||||| || |||||||||| | |||| | ||
Sbjct: 579 tccccggctggcacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgt 520
Query: 689 tgatctcgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcgg 748
| |||||| |||||||||| | |||||||||||| || |||||||| || |||||||| |
Sbjct: 519 ttatctcgttgatgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcag 460
Query: 749 cgatctcgcgcttg 762
||||||| ||||||
Sbjct: 459 cgatctcacgcttg 446
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 221 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 162
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 161 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 119
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 376 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 317
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 316 gcctcggtgaccacg 302
>dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G08, full
insert sequence
Length = 984
Score = 293 bits (148), Expect = 1e-076
Identities = 318/374 (85%), Gaps = 3/374 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 819 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 760
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 759 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 700
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 699 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 640
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 639 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 580
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgt 688
||||| | ||||||||||||| ||||| || |||||||||| | |||| | ||
Sbjct: 579 tccccggctggcacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgt 520
Query: 689 tgatctcgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcgg 748
| |||||| |||||||||| | |||||||||||| || |||||||| || |||||||| |
Sbjct: 519 ttatctcgttgatgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcag 460
Query: 749 cgatctcgcgcttg 762
||||||| ||||||
Sbjct: 459 cgatctcacgcttg 446
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 221 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 162
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 161 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 119
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 376 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 317
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 316 gcctcggtgaccacg 302
>ref|XM_473013.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 867
Score = 293 bits (148), Expect = 1e-076
Identities = 318/374 (85%), Gaps = 3/374 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 784 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 725
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 724 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 665
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 664 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 605
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 604 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 545
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgt 688
||||| | ||||||||||||| ||||| || |||||||||| | |||| | ||
Sbjct: 544 tccccggctggcacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgt 485
Query: 689 tgatctcgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcgg 748
| |||||| |||||||||| | |||||||||||| || |||||||| || |||||||| |
Sbjct: 484 ttatctcgttgatgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcag 425
Query: 749 cgatctcgcgcttg 762
||||||| ||||||
Sbjct: 424 cgatctcacgcttg 411
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 186 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 127
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 126 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 84
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 341 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 282
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 281 gcctcggtgaccacg 267
>gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010039, whole
genome shotgun sequence
Length = 18117
Score = 262 bits (132), Expect = 4e-067
Identities = 246/284 (86%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 2031 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 1972
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1971 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 1912
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 1911 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 1852
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1851 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 1792
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtag 675
||||| | ||||||||||||| ||||| || ||||||||||
Sbjct: 1791 tccccggctggcacggccactgcttgttgttcttgtcgcagtag 1748
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 1345 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 1286
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 1285 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 1243
Score = 61.9 bits (31), Expect = 8e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1050 ctggcagccgcagttctgcgcggcggccgggccggcggc 1088
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 17885 ctggcagccgcagttctgcgcggccgccggggcggcggc 17847
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 1500 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 1441
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 1440 gcctcggtgaccacg 1426
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 262 bits (132), Expect = 4e-067
Identities = 246/284 (86%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 2288265 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 2288324
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2288325 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 2288384
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 2288385 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 2288444
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2288445 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 2288504
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtag 675
||||| | ||||||||||||| ||||| || ||||||||||
Sbjct: 2288505 tccccggctggcacggccactgcttgttgttcttgtcgcagtag 2288548
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 2267411 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 2267470
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2267471 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 2267530
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 2267531 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 2267590
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 2267591 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 2267650
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 2267651 tgcccggctggcacggccactgtttgttgctc 2267682
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 2288951 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 2289010
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 2289011 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 2289053
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 2268202 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 2268251
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
|||||| || ||||||||||| | ||| ||||| | ||||||||||| ||||| || |
Sbjct: 2272331 gcacggccctgactggcacccttggccacagtatgcttcggtcgtgccacagtaccccca 2272390
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcggc 1088
| |||||||||| || |||||||||||||||||||||||| |||||| |||||||
Sbjct: 2272391 ttggctgcagcagtagccgtcctggcagccgcagttctgcgcggccgccggggcggcggc 2272450
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1032 gctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcgg 1087
||||||||| ||||| | | ||||||||||||||||||||| |||||||||||||
Sbjct: 2252237 gctgcagcacaagttcgccgcgcagccgcagttctgcgcggccgccgggccggcgg 2252292
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 2288796 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 2288855
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 2288856 gcctcggtgaccacg 2288870
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 2268353 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 2268395
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 262 bits (132), Expect = 4e-067
Identities = 246/284 (86%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 2579116 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 2579175
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2579176 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 2579235
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 2579236 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 2579295
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2579296 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 2579355
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtag 675
||||| | ||||||||||||| ||||| || ||||||||||
Sbjct: 2579356 tccccggctggcacggccactgcttgttgttcttgtcgcagtag 2579399
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 2557889 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 2557948
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2557949 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 2558008
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 2558009 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 2558068
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 2558069 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 2558128
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 2558129 tgcccggctggcacggccactgtttgttgctc 2558160
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 2579802 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 2579861
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 2579862 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 2579904
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 2558680 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 2558729
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1032 gctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcgg 1087
||||||||| ||||| | | ||||||||||||||||||||| |||||||||||||
Sbjct: 2542539 gctgcagcacaagttcgccgcgcagccgcagttctgcgcggccgccgggccggcgg 2542594
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 2579647 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 2579706
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 2579707 gcctcggtgaccacg 2579721
Score = 61.9 bits (31), Expect = 8e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1050 ctggcagccgcagttctgcgcggcggccgggccggcggc 1088
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 2563262 ctggcagccgcagttctgcgcggccgccggggcggcggc 2563300
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 2558831 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 2558873
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 262 bits (132), Expect = 4e-067
Identities = 246/284 (86%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 21723215 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 21723274
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 21723275 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 21723334
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 21723335 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 21723394
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 21723395 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 21723454
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtag 675
||||| | ||||||||||||| ||||| || ||||||||||
Sbjct: 21723455 tccccggctggcacggccactgcttgttgttcttgtcgcagtag 21723498
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 21701988 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 21702047
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 21702048 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 21702107
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 21702108 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 21702167
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 21702168 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 21702227
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 21702228 tgcccggctggcacggccactgtttgttgctc 21702259
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 21723901 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 21723960
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 21723961 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 21724003
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 21702779 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 21702828
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1032 gctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcgg 1087
||||||||| ||||| | | ||||||||||||||||||||| |||||||||||||
Sbjct: 21686638 gctgcagcacaagttcgccgcgcagccgcagttctgcgcggccgccgggccggcgg 21686693
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 21723746 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 21723805
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 21723806 gcctcggtgaccacg 21723820
Score = 61.9 bits (31), Expect = 8e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1050 ctggcagccgcagttctgcgcggcggccgggccggcggc 1088
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 21707361 ctggcagccgcagttctgcgcggccgccggggcggcggc 21707399
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 21702930 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 21702972
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
complete sequence
Length = 133856
Score = 262 bits (132), Expect = 4e-067
Identities = 246/284 (86%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 73765 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 73824
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 73825 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 73884
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 73885 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 73944
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 73945 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 74004
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtag 675
||||| | ||||||||||||| ||||| || ||||||||||
Sbjct: 74005 tccccggctggcacggccactgcttgttgttcttgtcgcagtag 74048
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 52911 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 52970
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 52971 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 53030
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 53031 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 53090
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 53091 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 53150
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 53151 tgcccggctggcacggccactgtttgttgctc 53182
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 74451 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 74510
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 74511 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 74553
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 53702 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 53751
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
|||||| || ||||||||||| | ||| ||||| | ||||||||||| ||||| || |
Sbjct: 57831 gcacggccctgactggcacccttggccacagtatgcttcggtcgtgccacagtaccccca 57890
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcggc 1088
| |||||||||| || |||||||||||||||||||||||| |||||| |||||||
Sbjct: 57891 ttggctgcagcagtagccgtcctggcagccgcagttctgcgcggccgccggggcggcggc 57950
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1032 gctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcgg 1087
||||||||| ||||| | | ||||||||||||||||||||| |||||||||||||
Sbjct: 37737 gctgcagcacaagttcgccgcgcagccgcagttctgcgcggccgccgggccggcgg 37792
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 74296 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 74355
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 74356 gcctcggtgaccacg 74370
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 53853 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 53895
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 262 bits (132), Expect = 4e-067
Identities = 246/284 (86%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 24684242 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 24684301
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 24684302 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 24684361
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 24684362 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 24684421
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 24684422 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttct 24684481
Query: 632 gccccgccgcgcacggccactgcctgttgctcgcgtcgcagtag 675
||||| | ||||||||||||| ||||| || ||||||||||
Sbjct: 24684482 tccccggctggcacggccactgcttgttgttcttgtcgcagtag 24684525
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 24663388 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 24663447
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 24663448 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 24663507
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 24663508 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 24663567
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 24663568 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 24663627
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 24663628 tgcccggctggcacggccactgtttgttgctc 24663659
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 24684928 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 24684987
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 24684988 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 24685030
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 24664179 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 24664228
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
|||||| || ||||||||||| | ||| ||||| | ||||||||||| ||||| || |
Sbjct: 24668308 gcacggccctgactggcacccttggccacagtatgcttcggtcgtgccacagtaccccca 24668367
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcggc 1088
| |||||||||| || |||||||||||||||||||||||| |||||| |||||||
Sbjct: 24668368 ttggctgcagcagtagccgtcctggcagccgcagttctgcgcggccgccggggcggcggc 24668427
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1032 gctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcgg 1087
||||||||| ||||| | | ||||||||||||||||||||| |||||||||||||
Sbjct: 24648214 gctgcagcacaagttcgccgcgcagccgcagttctgcgcggccgccgggccggcgg 24648269
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 24684773 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 24684832
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 24684833 gcctcggtgaccacg 24684847
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 24664330 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 24664372
>gb|CF311469.1|CF311469 ABF--06-L04.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-L04, mRNA sequence
Length = 510
Score = 232 bits (117), Expect = 4e-058
Identities = 207/237 (87%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || ||||||||||||| ||||||||||||||| |
Sbjct: 274 cggggttcttgccgttgcactcgagcgcaccgttgatggcccggatggtggcgccgaacc 333
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 334 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 393
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
|| | ||||||||||||||||| ||||| ||||||| ||| ||||||| | ||
Sbjct: 394 tcgtcgggtcctgcgccaccctgtccgggtccctcagcccgtcgaacccgatgttctgcc 453
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtact 628
| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 454 ccgcaggcccgtagttgtagttccacgagatctgcagcggcccgcgcccgtagtact 510
>gb|CB683115.1|CB683115 OSJNEf11B13.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11B13 5', mRNA sequence
Length = 862
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 646 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 587
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 586 cctgcgacatcacttggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 527
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 526 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 467
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 466 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 407
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 406 tgcccggctggcacggccactgtttgttgctc 375
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 337 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 278
Query: 758 gcttg 762
|||||
Sbjct: 277 gcttg 273
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 171 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 129
>dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase IIb,
complete cds
Length = 1036
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 671 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 612
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 611 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 552
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 551 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 492
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 491 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 432
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 431 tgcccggctggcacggccactgtttgttgctc 400
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 362 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 303
Query: 758 gcttg 762
|||||
Sbjct: 302 gcttg 298
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 196 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 154
>dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4 gene for PR-3 class IV
chitinase, complete cds
Length = 2172
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 1911 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 1852
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1851 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 1792
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 1791 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 1732
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 1731 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 1672
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 1671 tgcccggctggcacggccactgtttgttgctc 1640
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 1120 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 1071
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 969 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 927
>dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H09, full
insert sequence
Length = 1078
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 681 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 622
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 621 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 562
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 561 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 502
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 501 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 442
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 441 tgcccggctggcacggccactgtttgttgctc 410
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 372 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 313
Query: 758 gcttg 762
|||||
Sbjct: 312 gcttg 308
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 206 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 164
>dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128C09, full
insert sequence
Length = 1059
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 682 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 623
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 622 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 563
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 562 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 503
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 502 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 443
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 442 tgcccggctggcacggccactgtttgttgctc 411
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 373 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 314
Query: 758 gcttg 762
|||||
Sbjct: 313 gcttg 309
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 207 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 165
>gb|AACV01010037.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010037, whole
genome shotgun sequence
Length = 7641
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 4362 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 4303
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 4302 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 4243
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 4242 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 4183
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 4182 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 4123
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 4122 tgcccggctggcacggccactgtttgttgctc 4091
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
|||| |||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 3571 gtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgcgcttg 3522
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 3420 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 3378
>ref|XM_473009.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 858
Score = 214 bits (108), Expect = 8e-053
Identities = 231/272 (84%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 775 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 716
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 715 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 656
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 655 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 596
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 595 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 536
Query: 632 gccccgccgcgcacggccactgcctgttgctc 663
|||| | |||||||||||| ||||||||
Sbjct: 535 tgcccggctggcacggccactgtttgttgctc 504
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 466 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 407
Query: 758 gcttg 762
|||||
Sbjct: 406 gcttg 402
Score = 63.9 bits (32), Expect = 2e-007
Identities = 98/120 (81%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
|||||| || ||||||||||| | ||| ||||| | ||||||||||| ||||| || |
Sbjct: 180 gcacggccctgactggcacccttggccacagtatgcttcggtcgtgccacagtaccccca 121
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccggcggc 1088
| |||||||||| || |||||||||||||||||||||||| |||||| |||||||
Sbjct: 120 ttggctgcagcagtagccgtcctggcagccgcagttctgcgcggccgccggggcggcggc 61
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 300 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 258
>gb|CB654174.1|CB654174 OSJNEc05O21.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05O21 3', mRNA sequence
Length = 632
Score = 206 bits (104), Expect = 2e-050
Identities = 206/240 (85%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 358 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 417
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 418 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 477
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcc 571
| | ||||||||||||| ||| ||||| ||||||| ||| ||||||| | | |
Sbjct: 478 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgtcgaacccgatgttctttc 537
Query: 572 cggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttct 631
| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 538 ccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtacttct 597
>gb|AU090552.1|AU090552 AU090552 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2747, mRNA sequence
Length = 710
Score = 198 bits (100), Expect = 5e-048
Identities = 231/274 (84%), Gaps = 2/274 (0%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 318 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 259
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 258 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaagaga 199
Query: 512 tcacggcgtcctgcgccaccctgttggggtcggcgagcccgtt--gaagccgatgtccct 569
| | ||||||||||||| ||| ||||| |||||||| ||| ||||||| | |
Sbjct: 198 ttgtcgggtcctgcgccaccttgtctgggtcccttagcccgttccgaacccgatgttctt 139
Query: 570 cccggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtactt 629
|| || |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 138 tcccgccggcccgtagttgaagttccatgagatctgcagcggcccgcgtccgtagtactt 79
Query: 630 ctgccccgccgcgcacggccactgcctgttgctc 663
|| |||| | |||||| ||||| ||||||||
Sbjct: 78 cttgcccggctggcacggncactgtttgttgctc 45
>gb|AU089729.1|AU089729 AU089729 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12594, mRNA sequence
Length = 530
Score = 157 bits (79), Expect = 2e-035
Identities = 106/115 (92%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 149 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 90
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaa 35
>gb|AU096318.1|AU096318 AU096318 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13463, mRNA sequence
Length = 855
Score = 157 bits (79), Expect = 2e-035
Identities = 106/115 (92%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 474 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 415
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaa 360
>gb|CF277596.1|CF277596 14ETL--03-D06.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-D06, mRNA sequence
Length = 550
Score = 157 bits (79), Expect = 2e-035
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 391 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 450
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaa 505
>gb|CF281459.1|CF281459 14ETL--08-I08.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-I08, mRNA sequence
Length = 539
Score = 157 bits (79), Expect = 2e-035
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 393 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 452
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaa 507
>gb|CF281717.1|CF281717 14ETL--08-O04.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-O04, mRNA sequence
Length = 562
Score = 149 bits (75), Expect = 4e-033
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 399 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 458
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
|||||| |||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 459 cctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcgtgaa 513
>gb|AU082112.1|AU082112 AU082112 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1745, mRNA sequence
Length = 474
Score = 147 bits (74), Expect = 2e-032
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| || |||||||||||||| || | ||||||||||| | ||||||||||||| |
Sbjct: 203 cggggttcttgccgttgcactcgagcgcacngttgatggcccggntggtggcgccgaacc 144
Query: 452 cctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcga 511
||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 143 cctgcaacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaaggaga 84
Query: 512 tcacggcgtcctgcgccaccctgt 535
|| | |||||||||||||||||
Sbjct: 83 tcgtcgggtcctgcgccaccctgt 60
>gb|C19108.1|C19108 C19108 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S12594_5A, mRNA sequence
Length = 632
Score = 145 bits (73), Expect = 7e-032
Identities = 190/229 (82%)
Strand = Plus / Minus
Query: 435 gatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaaccagag 494
|||| ||||||| || || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 628 gatgttggcgccaaacccttgcgacatcacctggtgcacgttgttcatccagaaccagag 569
Query: 495 cgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgagcccgtt 554
|||||||||||| | ||| | ||||||||||||| ||| ||||| |||||||
Sbjct: 568 cgccgtcttgaaagagattgtcgggtcctgcgccaccttgtctgggtcccttagcccgtc 509
Query: 555 gaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcagcgggcc 614
||| ||||||| | | || || |||||||||||| ||||||| |||||||||||||| ||
Sbjct: 508 gaacccgatgttctttcccgccggcccgtagttgaagttccatgagatctgcagcggccc 449
Query: 615 gcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctc 663
||| ||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 448 gcgtccgtagtacttcttgcccggctggcacggccactgtttgttgctc 400
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 362 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 303
Query: 758 gcttg 762
|||||
Sbjct: 302 gcttg 298
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 196 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 154
>gb|CF311468.1|CF311468 ABF--06-L04.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-L04, mRNA sequence
Length = 646
Score = 145 bits (73), Expect = 7e-032
Identities = 156/183 (85%), Gaps = 3/183 (1%)
Strand = Plus / Minus
Query: 583 tagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcg 642
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |
Sbjct: 646 tagttgtagttccacgagatctgcagcggcccgcgcccgtagtacttcttccccggctgg 587
Query: 643 cacggccactgcctgttgctcgcgtcgcagtaggcgttgct---cttgttgatctcgctg 699
|||||||||||| ||||| || |||||||||| | |||| | ||| |||||| ||
Sbjct: 586 cacggccactgcttgttgttcttgtcgcagtagtccatgctcgccccgtttatctcgttg 527
Query: 700 atgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgc 759
|||||||| | |||||||||||| || |||||||| || |||||||| |||||||| |||
Sbjct: 526 atgtagcacatatgtccggtctcatgagtgacgtgggcaaagaaggcagcgatctcacgc 467
Query: 760 ttg 762
|||
Sbjct: 466 ttg 464
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 969 gcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaa 1028
||||||||| || ||||||| || ||||||||||| | | |||||||||||| || |
Sbjct: 239 gcacgggccagagcggcacccatctccgcagtagtccttgcccgtgccgcagtaccccca 180
Query: 1029 cttgctgcagcagaagttaggctggcagccgcagttctgcgcg 1071
||||||||||| | ||| | ||||||||||||||||||||||
Sbjct: 179 tttgctgcagcacatgttcgactggcagccgcagttctgcgcg 137
Score = 61.9 bits (31), Expect = 8e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 832 gtgtagaagttcttgccctcgcacccgctcccggcctggttcttgatgccgttgaagaac 891
||||| ||||||||||| |||| ||| || ||||||||||||||| || |||||||||
Sbjct: 394 gtgtaaaagttcttgccggcgcaaccgttcggggcctggttcttgatcccattgaagaac 335
Query: 892 gcgtcgctgaccacg 906
|| ||| ||||||||
Sbjct: 334 gcctcggtgaccacg 320
>gb|CF276538.1|CF276538 14ETL--01-L15.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-L15, mRNA sequence
Length = 510
Score = 143 bits (72), Expect = 3e-031
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctg-atggtggcgccgaag 450
||||||| ||||||||||||||||| || ||||||||||||| | ||||||||||| ||
Sbjct: 393 cggggttcttcccgttgcactcgagcgcaccgttgatggccccggatggtggcgccaaac 452
Query: 451 ccctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccctgcgacatcacctggtgcacgttgttcatccagaaccagagcgccgtcttgaa 508
>gb|CF277868.1|CF277868 14ETL--03-J01.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-J01, mRNA sequence
Length = 606
Score = 137 bits (69), Expect = 2e-029
Identities = 165/197 (83%)
Strand = Plus / Minus
Query: 467 ggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctgcg 526
|||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||
Sbjct: 606 ggtgcacgttgttcatccagaaccagagcgccgtcttgaaagagattgtcgggtcctgcg 547
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| ||| ||||| ||||||| ||| ||||||| | | || || ||||||||||
Sbjct: 546 ccaccttgtctgggtcccttagcccgtcgaacccgatgttctttcccgccggcccgtagt 487
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| ||||||| |||||||||||||| ||||| ||||||||||||| |||| | |||||
Sbjct: 486 tgaagttccatgagatctgcagcggcccgcgtccgtagtacttcttgcccggctggcacg 427
Query: 647 gccactgcctgttgctc 663
||||||| ||||||||
Sbjct: 426 gccactgtttgttgctc 410
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 372 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 313
Query: 758 gcttg 762
|||||
Sbjct: 312 gcttg 308
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||| ||| ||| ||||||||
Sbjct: 206 ggcctggttcttgatcccgttgaagagcgcctcggtgaccacg 164
>gb|CF310438.1|CF310438 ABF--05-B10.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-B10, mRNA sequence
Length = 605
Score = 137 bits (69), Expect = 2e-029
Identities = 165/197 (83%)
Strand = Plus / Minus
Query: 467 ggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctgcg 526
|||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||
Sbjct: 605 ggtgcacgttgttcatccagaaccagagcgccgtcttgaaagagattgtcgggtcctgcg 546
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| ||| ||||| ||||||| ||| ||||||| | | || || ||||||||||
Sbjct: 545 ccaccttgtctgggtcccttagcccgtcgaacccgatgttctttcccgccggcccgtagt 486
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| ||||||| |||||||||||||| ||||| ||||||||||||| |||| | |||||
Sbjct: 485 tgaagttccatgagatctgcagcggcccgcgtccgtagtacttcttgcccggctggcacg 426
Query: 647 gccactgcctgttgctc 663
||||||| ||||||||
Sbjct: 425 gccactgtttgttgctc 409
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 371 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 312
Query: 758 gcttg 762
|||||
Sbjct: 311 gcttg 307
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 205 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 163
>ref|XM_466626.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 976
Score = 137 bits (69), Expect = 2e-029
Identities = 244/299 (81%), Gaps = 5/299 (1%)
Strand = Plus / Minus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 700 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 642
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 641 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 582
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 581 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 522
Query: 647 gccactgcctgttgctcgcgtcgcagtaggcgttgctc---ttgttgatctcgctgatgt 703
|||||||| || | || ||||||||||| |||||| || |||||| |||||
Sbjct: 521 gccactgcgtgctcgtctcgtcgcagtagttcttgctcggtccgtcgatctcctcgatgt 462
Query: 704 agcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||| | | ||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 461 agcagaactttatggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 403
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 864 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 805
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 804 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 745
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 744 gcgcggatggtggcgccgaacccctg 719
>gb|CF310877.1|CF310877 ABF--05-M16.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-M16, mRNA sequence
Length = 612
Score = 133 bits (67), Expect = 2e-028
Identities = 157/187 (83%)
Strand = Plus / Minus
Query: 467 ggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctgcg 526
|||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||
Sbjct: 612 ggtgcacgttgttcatccagaaccagagcgccgtcttgaaagagattgtcgggtcctgcg 553
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| ||| ||||| ||||||| ||| ||||||| | | || || ||||||||||
Sbjct: 552 ccaccttgtctgggtcccttagcccgtcgaacccgatgttctttcccgccggcccgtagt 493
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| ||||||| |||||||||||||| ||||| ||||||||||||| |||| | |||||
Sbjct: 492 tgaagttccatgagatctgcagcggcccgcgtccgtagtacttcttgcccggctggcacg 433
Query: 647 gccactg 653
|||||||
Sbjct: 432 gccactg 426
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 378 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 319
Query: 758 gcttg 762
|||||
Sbjct: 318 gcttg 314
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 212 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 170
>gb|AU082745.1|AU082745 AU082745 Rice mature leaf Oryza sativa (japonica cultivar-group)
cDNA clone S21009, mRNA sequence
Length = 708
Score = 131 bits (66), Expect = 1e-027
Identities = 243/299 (81%), Gaps = 5/299 (1%)
Strand = Plus / Minus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 680 gtgcacgttgttgntccagtaccagagcgccgtct-gaacgccagcacggggctccttcg 622
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || || ||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 621 ccaccgcgtccggttcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 562
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 561 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 502
Query: 647 gccactgcctgttgctcgcgtcgcagtaggcgttgctc---ttgttgatctcgctgatgt 703
|||||||| || | || ||||||||||| |||||| || |||||| |||||
Sbjct: 501 gccactgcgtgctcgtctcgtcgcagtagttcttgctcggtccgtcgatctcctcgatgt 442
Query: 704 agcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||| | | ||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 441 agcagaactttatggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 383
>gb|CF310948.1|CF310948 ABF--05-O14.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-O14, mRNA sequence
Length = 613
Score = 131 bits (66), Expect = 1e-027
Identities = 166/198 (83%), Gaps = 1/198 (0%)
Strand = Plus / Minus
Query: 467 ggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctgcg 526
|||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||
Sbjct: 613 ggtgcacgttgttcatccagaaccagagcgccgtcttgaaagagattgtcgggtcctgcg 554
Query: 527 ccaccct-gttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtag 585
||||||| || ||||| ||||||| ||| ||||||| | | || || |||||||||
Sbjct: 553 ccacccttgtctgggtcccttagcccgtcgaacccgatgttctttcccgccggcccgtag 494
Query: 586 ttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcac 645
||| ||||||| |||||||||||||| ||||| ||||||||||||| |||| | ||||
Sbjct: 493 ttgaagttccatgagatctgcagcggcccgcgtccgtagtacttcttgcccggctggcac 434
Query: 646 ggccactgcctgttgctc 663
|||||||| ||||||||
Sbjct: 433 ggccactgtttgttgctc 416
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 378 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 319
Query: 758 gcttg 762
|||||
Sbjct: 318 gcttg 314
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 212 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 170
>dbj|AP005001.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0043C06, ***
SEQUENCING IN PROGRESS ***
Length = 159465
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 64530 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 64588
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 64589 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 64648
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 64649 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 64708
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 64709 gccactgcgtgctcgtctcgtcgcagtag 64737
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 64366 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 64425
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 64426 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 64485
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 64486 gcgcggatggtggcgccgaacccctg 64511
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 64871 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 64916
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1058_F07
Length = 95841
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 73298 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 73356
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 73357 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 73416
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 73417 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 73476
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 73477 gccactgcgtgctcgtctcgtcgcagtag 73505
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 73134 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 73193
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 73194 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 73253
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 73254 gcgcggatggtggcgccgaacccctg 73279
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 73639 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 73684
>gb|AACV01004867.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004867, whole
genome shotgun sequence
Length = 60967
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Minus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 55176 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 55118
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 55117 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 55058
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 55057 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 54998
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 54997 gccactgcgtgctcgtctcgtcgcagtag 54969
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 55340 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 55281
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 55280 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 55221
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 55220 gcgcggatggtggcgccgaacccctg 55195
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 54835 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 54790
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 4946956 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 4947014
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 4947015 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 4947074
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 4947075 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 4947134
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 4947135 gccactgcgtgctcgtctcgtcgcagtag 4947163
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 4946792 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 4946851
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 4946852 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 4946911
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 4946912 gcgcggatggtggcgccgaacccctg 4946937
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 4947297 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 4947342
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 10048548 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 10048606
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 10048607 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 10048666
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 10048667 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 10048726
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 10048727 gccactgcgtgctcgtctcgtcgcagtag 10048755
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 10048384 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 10048443
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 10048444 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 10048503
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 10048504 gcgcggatggtggcgccgaacccctg 10048529
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 10048889 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 10048934
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 23501612 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 23501670
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 23501671 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 23501730
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 23501731 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 23501790
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 23501791 gccactgcgtgctcgtctcgtcgcagtag 23501819
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 23501448 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 23501507
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 23501508 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 23501567
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 23501568 gcgcggatggtggcgccgaacccctg 23501593
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 23501953 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 23501998
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 121 bits (61), Expect = 9e-025
Identities = 174/209 (83%), Gaps = 2/209 (0%)
Strand = Plus / Plus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 23762714 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 23762772
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 23762773 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 23762832
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 23762833 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 23762892
Query: 647 gccactgcctgttgctcgcgtcgcagtag 675
|||||||| || | || |||||||||||
Sbjct: 23762893 gccactgcgtgctcgtctcgtcgcagtag 23762921
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 23762550 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 23762609
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 23762610 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 23762669
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 23762670 gcgcggatggtggcgccgaacccctg 23762695
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 717 ggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 23763055 ggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcgcttg 23763100
>gb|CA754096.1|CA754096 BR040009000_PLATE_C03_19_020.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040009000_PLATE_C03_19_020.ab1 similar to (AF402937)
chitinase-B [Saccharum officinarum], mRNA sequence
Length = 548
Score = 119 bits (60), Expect = 4e-024
Identities = 158/188 (84%), Gaps = 2/188 (1%)
Strand = Plus / Minus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 204 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 146
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 145 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 86
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 85 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 26
Query: 647 gccactgc 654
||||||||
Sbjct: 25 gccactgc 18
Score = 65.9 bits (33), Expect = 5e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 403 ccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctg 455
|||| ||||||||| |||||||||||||| | ||||||||||||||| |||||
Sbjct: 275 ccgtcgcactcgagcgcgccgttgatggcgcggatggtggcgccgaacccctg 223
>dbj|AK064754.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G01, full
insert sequence
Length = 976
Score = 119 bits (60), Expect = 4e-024
Identities = 158/188 (84%), Gaps = 2/188 (1%)
Strand = Plus / Minus
Query: 468 gtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcg 526
|||||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||
Sbjct: 700 gtgcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cg 642
Query: 527 ccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagt 586
||||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||
Sbjct: 641 ccaccgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagt 582
Query: 587 tgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacg 646
|| |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||
Sbjct: 581 tgaagttccacgagatctgcagcggcccgcgcccgtagtaccccttccccgccatgcacg 522
Query: 647 gccactgc 654
||||||||
Sbjct: 521 gccactgc 514
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 864 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 805
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 804 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 745
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 744 gcgcggatggtggcgccgaacccctg 719
Score = 63.9 bits (32), Expect = 2e-007
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 699 gatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcg 758
|||||||||||| | | ||||||||| || |||| |||||||||||||||||||||||
Sbjct: 466 gatgtagcagaactttatggtctcgtggttggcgtgggcgaagaaggcggcgatctcgcg 407
Query: 759 cttg 762
||||
Sbjct: 406 cttg 403
>gb|CV732267.1|CV732267 FLO--06-K18.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-K18,
mRNA sequence
Length = 494
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 392 cggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagc 451
||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| || |
Sbjct: 407 cggggttcttcccgttgcactcgagcgcaccgttgatggcccggatggtggcgccaaacc 466
Query: 452 cctgcggcatcacacggtgcacgttgtt 479
|||||| |||||| |||||||||||||
Sbjct: 467 cctgcgacatcacctggtgcacgttgtt 494
>gb|AU056965.1|AU056965 AU056965 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21023_2Z, mRNA sequence
Length = 529
Score = 101 bits (51), Expect = 9e-019
Identities = 156/187 (83%), Gaps = 3/187 (1%)
Strand = Plus / Minus
Query: 470 gcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcg-tcctgcgcc 528
|||||||||| ||||| ||||||||||||||| |||||| | ||||| | |||| ||||
Sbjct: 256 gcacgttgttggtccagtaccagagcgccgtctggaacgccagcacggggctcct-cgcc 198
Query: 529 accctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagttg 588
||| || |||||| | ||||||| ||| |||||| | ||| || ||||||||||||
Sbjct: 197 accgcgtccgggtcgcccagcccgtcgaacccgatgctctgccccgccggcccgtagttg 138
Query: 589 tagttccacgagatctgcagcgggccgcgcccgt-agtacttctgccccgccgcgcacgg 647
|||||||||||||||||||||| |||||||||| ||||| || ||||||| ||||||
Sbjct: 137 aagttccacgagatctgcagcggcccgcgcccgtaagtaccccttccccgccatgcacgg 78
Query: 648 ccactgc 654
|||||||
Sbjct: 77 ccactgc 71
Score = 75.8 bits (38), Expect = 5e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 310 tagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagtag 369
||||| ||||||||| || |||||||||| || |||||||||| |||||| |||||||
Sbjct: 423 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcagaactgctggtagtag 364
Query: 370 ccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgatg 429
||||||| | | | || |||||| || |||| ||||||||| ||||||||||||
Sbjct: 363 gcgacgcggttgctgacggcggtggggttcttgccgtcgcactcgagcgcgccgttgatg 304
Query: 430 gccctgatggtggcgccgaagccctg 455
|| | ||||||||||||||| |||||
Sbjct: 303 gcgcggatggtggcgccgaacccctg 278
>gb|CF277595.1|CF277595 14ETL--03-D06.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-D06, mRNA sequence
Length = 641
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
||||||| ||| ||||||| | | || || |||||||||||| ||||||| |||||||||
Sbjct: 560 agcccgtcgaacccgatgttctttcccgccggcccgtagttgaagttccatgagatctgc 501
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctc 663
||||| ||||| ||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 500 agcggcccgcgtccgtagtacttcttgcccggctggcacggccactgtttgttgctc 444
Score = 81.8 bits (41), Expect = 8e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 406 tgatgtagcacatatgtccagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 347
Query: 758 gcttg 762
|||||
Sbjct: 346 gcttg 342
Score = 79.8 bits (40), Expect = 3e-012
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 467 ggtgcacgttgttcatccagaaccagagcgccgtcttgaa 506
||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggtgcacgttgttcatccagaaccagagcgccgtcttgaa 602
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 240 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 198
>gb|CF280049.1|CF280049 14ETL--06-J06.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-J06, mRNA sequence
Length = 580
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
||||||| ||| ||||||| | | || || |||||||||||| ||||||| |||||||||
Sbjct: 532 agcccgtcgaaaccgatgttctttcccgccggcccgtagttgaagttccatgagatctgc 473
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctc 663
||||| ||||| ||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 472 agcggcccgcgtccgtagtacttcttgcccggctggcacggccactgtttgttgctc 416
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 698 tgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgc 757
|||||||||| | ||||| |||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 378 tgatgtagcacatatgtctagtctcgtgtgtgacatgcgcgaagaaggcagcgatctcgc 319
Query: 758 gcttg 762
|||||
Sbjct: 318 gcttg 314
Score = 61.9 bits (31), Expect = 8e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacg 906
||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 212 ggcctggttcttgatcccgttgaagaacgcctcggtgaccacg 170
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,536,301
Number of Sequences: 438736
Number of extensions: 1536301
Number of successful extensions: 12505
Number of sequences better than 0.5: 147
Number of HSP's better than 0.5 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11205
Number of HSP's gapped (non-prelim): 1271
length of query: 1225
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1204
effective length of database: 2,791,206,460
effective search space: 3360612577840
effective search space used: 3360612577840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)