BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.5
(733 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB666264.1|CB666264 OSJNEd13B15.f OSJNEd Oryza sativa (j... 710 0.0
dbj|AK121709.1| Oryza sativa (japonica cultivar-group) cDNA... 710 0.0
gb|AACV01005232.1| Oryza sativa (japonica cultivar-group) c... 710 0.0
ref|XM_467310.1| Oryza sativa (japonica cultivar-group), mRNA 710 0.0
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 710 0.0
dbj|AP004778.3| Oryza sativa (japonica cultivar-group) geno... 710 0.0
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 710 0.0
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 710 0.0
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 710 0.0
gb|CB666265.1|CB666265 OSJNEd13B15.r OSJNEd Oryza sativa (j... 702 0.0
gb|CF277900.1|CF277900 14ETL--03-J18.b1 Rice etiolated leaf... 688 0.0
gb|CF293873.1|CF293873 30DGS--03-D08.b1 Rice leaf plasmid c... 688 0.0
gb|AACV01010423.1| Oryza sativa (japonica cultivar-group) c... 688 0.0
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 688 0.0
ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BA... 688 0.0
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 688 0.0
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 688 0.0
emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromoso... 688 0.0
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 688 0.0
ref|XM_462686.1| Oryza sativa (japonica cultivar-group), p... 680 0.0
ref|XM_473741.1| Oryza sativa (japonica cultivar-group), p... 680 0.0
gb|CF276032.1|CF276032 14ETL--01-A11.b1 Rice etiolated leaf... 601 e-169
gb|AU062881.2|AU062881 AU062881 Rice callus Oryza sativa (j... 575 e-161
gb|CV726113.1|CV726113 14Salt--03-J09.b1 Salt treated rice ... 565 e-158
gb|CV726074.1|CV726074 14Salt--03-I09.b1 Salt treated rice ... 549 e-154
gb|CF277901.1|CF277901 14ETL--03-J18.g1 Rice etiolated leaf... 496 e-138
gb|CF276033.1|CF276033 14ETL--01-A11.g1 Rice etiolated leaf... 488 e-135
gb|D15738.1|D15738 RICC1170A Rice callus Oryza sativa (japo... 450 e-124
gb|AU083384.1|AU083384 AU083384 Rice callus Oryza sativa (j... 345 2e-092
gb|AU093846.1|AU093846 AU093846 Rice panicle at flowering s... 325 2e-086
gb|C73337.1|C73337 C73337 Rice panicle at flowering stage O... 323 8e-086
gb|CF293874.1|CF293874 30DGS--03-D08.g1 Rice leaf plasmid c... 317 5e-084
gb|CV726075.1|CV726075 14Salt--03-I09.g1 Salt treated rice ... 307 5e-081
gb|CV726114.1|CV726114 14Salt--03-J09.g1 Salt treated rice ... 305 2e-080
gb|CV727142.1|CV727142 14Salt--05-C09.g1 Salt treated rice ... 305 2e-080
gb|C73971.1|C73971 C73971 Rice panicle shorter than 3cm Ory... 301 3e-079
gb|C98657.1|C98657 C98657 Rice panicle at flowering stage O... 280 1e-072
gb|D22680.1|D22680 RICC0892A Rice callus Oryza sativa (japo... 258 4e-066
gb|AQ331053.1|AQ331053 nbxb0048L05r CUGI Rice BAC Library O... 252 2e-064
gb|D15345.2|D15345 RICC0491A Rice callus Oryza sativa (japo... 226 1e-056
gb|AQ365974.2|AQ365974 nbxb0064J04f CUGI Rice BAC Library O... 141 6e-031
gb|D39887.1|D39887 RICS1534A Rice shoot Oryza sativa (japon... 127 9e-027
gb|AQ796940.1|AQ796940 nbxb0071D13f CUGI Rice BAC Library O... 121 6e-025
gb|CF297965.1|CF297965 7LEAF--01-C13.g1 Rice leaf plasmid c... 82 5e-013
gb|AQ364344.1|AQ364344 nbxb0060J06r CUGI Rice BAC Library O... 48 0.007
dbj|AK101830.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.11
emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC O... 44 0.11
dbj|AP005125.3| Oryza sativa (japonica cultivar-group) geno... 44 0.11
dbj|AP005098.4| Oryza sativa (japonica cultivar-group) geno... 44 0.11
ref|NT_107158.1| Oryza sativa (japonica cultivar-group) 44 0.11
gb|AACV01024136.1| Oryza sativa (japonica cultivar-group) c... 44 0.11
ref|XM_477129.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.11
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 44 0.11
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.11
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.11
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 44 0.11
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CF196224.1|CF196224 Azvi1.4_G03 AZ-VI Oryza sativa (japo... 42 0.42
gb|CF196257.1|CF196257 Azvi1.6_B03 AZ-VI Oryza sativa (japo... 42 0.42
dbj|AK109917.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.42
dbj|AP004651.3| Oryza sativa (japonica cultivar-group) geno... 42 0.42
dbj|AP005107.3| Oryza sativa (japonica cultivar-group) geno... 42 0.42
gb|AACV01001701.1| Oryza sativa (japonica cultivar-group) c... 42 0.42
gb|AACV01013429.1| Oryza sativa (japonica cultivar-group) c... 42 0.42
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 42 0.42
ref|NM_192552.1| Oryza sativa (japonica cultivar-group), p... 42 0.42
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 42 0.42
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 42 0.42
dbj|AP003300.4| Oryza sativa (japonica cultivar-group) geno... 42 0.42
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 42 0.42
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 42 0.42
>gb|CB666264.1|CB666264 OSJNEd13B15.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13B15 5', mRNA sequence
Length = 761
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 526 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 467
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 466 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 407
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 406 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 347
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 346 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 287
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 286 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 227
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 226 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 167
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 166 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 107
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 106 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 47
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 46 ttcggcggcatggc 33
>dbj|AK121709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076B01, full
insert sequence
Length = 831
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 576 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 517
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 516 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 457
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 456 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 397
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 396 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 337
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 336 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 277
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 276 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 217
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 216 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 157
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 156 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 97
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 96 ttcggcggcatggc 83
>gb|AACV01005232.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005232, whole
genome shotgun sequence
Length = 45807
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 34718 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 34659
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 34658 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 34599
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 34598 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 34539
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 34538 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 34479
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 34478 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 34419
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 34418 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 34359
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 34358 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 34299
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 34298 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 34239
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 34238 ttcggcggcatggc 34225
>ref|XM_467310.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 831
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 576 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 517
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 516 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 457
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 456 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 397
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 396 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 337
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 336 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 277
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 276 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 217
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 216 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 157
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 156 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 97
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 96 ttcggcggcatggc 83
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3957001 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 3956942
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3956941 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 3956882
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 3956881 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 3956822
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 3956821 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 3956762
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3956761 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 3956702
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 3956701 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 3956642
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 3956641 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 3956582
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 3956581 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 3956522
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 3956521 ttcggcggcatggc 3956508
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0459B01
Length = 163087
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 108575 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 108516
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 108515 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 108456
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 108455 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 108396
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 108395 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 108336
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 108335 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 108276
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 108275 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 108216
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 108215 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 108156
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 108155 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 108096
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 108095 ttcggcggcatggc 108082
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 15302089 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 15302030
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 15302029 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 15301970
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 15301969 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 15301910
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 15301909 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 15301850
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 15301849 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 15301790
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 15301789 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 15301730
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 15301729 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 15301670
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 15301669 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 15301610
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 15301609 ttcggcggcatggc 15301596
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 28755153 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 28755094
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 28755093 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 28755034
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 28755033 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 28754974
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 28754973 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 28754914
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28754913 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 28754854
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 28754853 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 28754794
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 28754793 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 28754734
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 28754733 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 28754674
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 28754673 ttcggcggcatggc 28754660
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 710 bits (358), Expect = 0.0
Identities = 460/494 (93%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 28792002 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 28791943
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 28791942 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 28791883
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 28791882 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 28791823
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 28791822 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 28791763
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28791762 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacg 28791703
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 28791702 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 28791643
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 28791642 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 28791583
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 28791582 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 28791523
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 28791522 ttcggcggcatggc 28791509
>gb|CB666265.1|CB666265 OSJNEd13B15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13B15 3', mRNA sequence
Length = 733
Score = 702 bits (354), Expect = 0.0
Identities = 459/494 (92%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 240 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 299
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 300 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 359
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 360 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 419
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 420 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 479
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 480 ttgatgacgagcgccgcggcggaggggacgacggaaaccttggcctgccggttctggacg 539
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 540 gtgagcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 599
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| |||||||||||||||||||| |||||||| ||||||||||| || || |||||||||
Sbjct: 600 tctccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgcc 659
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||
Sbjct: 660 gcgccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagc 719
Query: 710 ttgggcggcatggc 723
|| |||||||||||
Sbjct: 720 ttcggcggcatggc 733
>gb|CF277900.1|CF277900 14ETL--03-J18.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-J18, mRNA sequence
Length = 706
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 616 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 557
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 556 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 497
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 496 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 437
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 436 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 377
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 376 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 317
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 257
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 256 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 197
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 196 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 137
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 136 ttcggcggcatggcg 122
>gb|CF293873.1|CF293873 30DGS--03-D08.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-D08, mRNA sequence
Length = 675
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 610 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 551
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 550 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 491
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 490 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 431
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 430 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 371
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 370 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 311
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 251
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 250 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 191
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 190 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 131
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 130 ttcggcggcatggcg 116
>gb|AACV01010423.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010423, whole
genome shotgun sequence
Length = 68448
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 66836 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 66777
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 66776 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 66717
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 66716 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 66657
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 66656 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 66597
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 66596 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 66537
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 66536 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 66477
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 66476 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 66417
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 66416 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 66357
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 66356 ttcggcggcatggcg 66342
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 111438 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 111379
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 111378 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 111319
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 111318 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 111259
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 111258 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 111199
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 111198 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 111139
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 111138 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 111079
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 111078 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 111019
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 111018 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 110959
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 110958 ttcggcggcatggcg 110944
>ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093F12,
complete sequence
Length = 186339
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 111438 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 111379
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 111378 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 111319
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 111318 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 111259
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 111258 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 111199
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 111198 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 111139
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 111138 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 111079
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 111078 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 111019
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 111018 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 110959
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 110958 ttcggcggcatggcg 110944
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 7935972 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 7935913
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 7935912 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 7935853
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 7935852 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 7935793
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 7935792 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 7935733
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 7935732 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 7935673
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 7935672 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 7935613
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 7935612 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 7935553
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 7935552 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 7935493
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 7935492 ttcggcggcatggcg 7935478
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 27080071 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 27080012
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 27080011 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 27079952
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 27079951 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 27079892
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 27079891 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 27079832
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 27079831 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 27079772
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 27079771 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 27079712
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 27079711 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 27079652
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 27079651 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 27079592
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 27079591 ttcggcggcatggcg 27079577
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
complete sequence
Length = 186142
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 111218 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 111159
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 111158 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 111099
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 111098 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 111039
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 111038 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 110979
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 110978 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 110919
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 110918 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 110859
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 110858 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 110799
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 110798 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 110739
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 110738 ttcggcggcatggcg 110724
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 688 bits (347), Expect = 0.0
Identities = 458/495 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 30214927 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 30214868
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 30214867 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 30214808
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 30214807 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 30214748
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 30214747 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 30214688
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 30214687 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 30214628
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 30214627 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 30214568
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 30214567 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 30214508
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 30214507 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 30214448
Query: 710 ttgggcggcatggcg 724
|| ||||||||||||
Sbjct: 30214447 ttcggcggcatggcg 30214433
>ref|XM_462686.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 501
Score = 680 bits (343), Expect = 0.0
Identities = 454/491 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 491 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 432
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 431 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 372
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 371 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 312
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 311 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 252
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 251 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 192
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 132
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 131 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 72
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 71 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 12
Query: 710 ttgggcggcat 720
|| ||||||||
Sbjct: 11 ttcggcggcat 1
>ref|XM_473741.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 501
Score = 680 bits (343), Expect = 0.0
Identities = 454/491 (92%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 491 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 432
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 431 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 372
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 371 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 312
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 311 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 252
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacg 529
|||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 251 ttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggacg 192
Query: 530 gtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcc 589
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtgagcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcc 132
Query: 590 tcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgcc 649
|| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 131 tcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgcc 72
Query: 650 gcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagc 709
||||| |||||||| || ||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 71 gcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagc 12
Query: 710 ttgggcggcat 720
|| ||||||||
Sbjct: 11 ttcggcggcat 1
>gb|CF276032.1|CF276032 14ETL--01-A11.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-A11, mRNA sequence
Length = 440
Score = 601 bits (303), Expect = e-169
Identities = 400/431 (92%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 294 tgcacccgacgctgacgcaggtgccgaggatctcc-ttgacggtgccggccaactccttg 352
|||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 440 tgcagccgacgctgacgcaggtgccgaggatctcccttgacggtgccggccatctccttg 381
Query: 353 gccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatgttg 412
|||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||
Sbjct: 380 gccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatgttg 321
Query: 413 ccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttg 472
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 ccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgccttg 261
Query: 473 atgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtg 532
||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 260 atgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgggcggtg 201
Query: 533 agcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcg 592
||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 200 agcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctct 141
Query: 593 ccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgccgcg 652
|||||||||||||||||||| |||||||| ||||||||||| || || ||||||||||||
Sbjct: 140 ccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgccgcg 81
Query: 653 ccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagcttg 712
|||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||||||||
Sbjct: 80 ccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagcttc 21
Query: 713 ggcggcatggc 723
|||||||||||
Sbjct: 20 ggcggcatggc 10
>gb|AU062881.2|AU062881 AU062881 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51240_7A, mRNA sequence
Length = 420
Score = 575 bits (290), Expect = e-161
Identities = 391/422 (92%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 272 ttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtgccgaggatctccttg 331
||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||
Sbjct: 420 ttggggtccttgccgtcgacggtgcacccaacg-tgacgcaggtcccaaggatctccttg 362
Query: 332 acggtgccggccaactccttggccatggacctgttcctcatggtcctggcgatctcgacg 391
||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 361 acggtcccggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatg 302
Query: 392 acgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttccggtccctc 451
|||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |
Sbjct: 301 acgtcgtcgaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgc 242
Query: 452 tcgggctccttgagcgccttgatgacgagcgcggcggcggaggggacgacggagaccttg 511
|||||||||||||| ||||||||||||||||| |||||||||||||||||||| | |||
Sbjct: 241 tcgggctccttgagggccttgatgacgagcgccgcggcggaggggacgacggaca-cttc 183
Query: 512 gcctggcggttctggacggtgagcttgacggtgacgcgcaggcccttccagtccttggcc 571
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 182 gcctgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggcc 123
Query: 572 gtctccttggcgatgtcctcgccgatcttcttcggggagagcccgagcgggccgatcttg 631
|||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 122 gtctccttggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttg 63
Query: 632 ggcgccagggacgacgccgcgccgacctcgccgcccgtcacccggacgaagacctccacc 691
|| || ||||||||||||||||| |||||||| || ||||| |||||||| || ||||||
Sbjct: 62 ggggcaagggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccacc 3
Query: 692 ac 693
||
Sbjct: 2 ac 1
>gb|CV726113.1|CV726113 14Salt--03-J09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-J09, mRNA sequence
Length = 532
Score = 565 bits (285), Expect = e-158
Identities = 375/405 (92%)
Strand = Plus / Minus
Query: 320 aggatctccttgacggtgccggccaactccttggccatggacctgttcctcatggtcctg 379
||||||||||||||||| | ||||| |||||||||||||||||||||| ||||| |||||
Sbjct: 528 aggatctccttgacggtcctggccatctccttggccatggacctgttcatcatgatcctg 469
Query: 380 gcgatctcgacgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttc 439
|||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 468 gcgatctcgatgacgtcgtcgaggctgatgttaccactgtgcttgatgttcttgaccttc 409
Query: 440 ttccggtccctctcgggctccttgagcgccttgatgacgagcgcggcggcggaggggacg 499
|||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 408 ttcctgtcccgctcgggctccttgagggccttgatgacgagcgccgcggcggaggggacg 349
Query: 500 acggagaccttggcctggcggttctggacggtgagcttgacggtgacgcgcaggcccttc 559
||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 348 acggacaccttcgcctgacggttctggacggtgagcttgacggtgacgcggaggcccttc 289
Query: 560 cagtccttggccgtctccttggcgatgtcctcgccgatcttcttcggggagagcccgagc 619
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 288 cagtccttggccgtctccttggcgatgtcctcaccgatcttcttgggggagagaccgaga 229
Query: 620 gggccgatcttgggcgccagggacgacgccgcgccgacctcgccgcccgtcacccggacg 679
|||||||||||||| || ||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 228 gggccgatcttgggggcaagggacgacgccgcgcccacctcgcctccggtcacgcggacg 169
Query: 680 aagacctccaccacctgcgacgggtcgagcttgggcggcatggcg 724
|| || ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 168 aacacatccaccacctgcgtcgggtcgagcttcggcggcatggcg 124
>gb|CV726074.1|CV726074 14Salt--03-I09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-I09, mRNA sequence
Length = 516
Score = 549 bits (277), Expect = e-154
Identities = 373/405 (92%)
Strand = Plus / Minus
Query: 320 aggatctccttgacggtgccggccaactccttggccatggacctgttcctcatggtcctg 379
||||||||||||||||| | ||||| |||||||||||||||||||||| ||||| |||||
Sbjct: 511 aggatctccttgacggtcctggccatctccttggccatggacctgttcatcatgatcctg 452
Query: 380 gcgatctcgacgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttc 439
|||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 451 gcgatctcgatgacgtcgtcgaggctgatgttaccactgtgcttgatgttcttgaccttc 392
Query: 440 ttccggtccctctcgggctccttgagcgccttgatgacgagcgcggcggcggaggggacg 499
|||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 391 ttcctgtcccgctcgggctccttgagggccttgatgacgagcgccgcggcggaggggacg 332
Query: 500 acggagaccttggcctggcggttctggacggtgagcttgacggtgacgcgcaggcccttc 559
||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 331 acggacaccttcgcctgacggttctggacggtgagcttgacggtgacgcggaggcccttc 272
Query: 560 cagtccttggccgtctccttggcgatgtcctcgccgatcttcttcggggagagcccgagc 619
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 271 cagtccttggccgtctccttggcgatgtcctcaccgatcttcttgggggagagaccgaga 212
Query: 620 gggccgatcttgggcgccagggacgacgccgcgccgacctcgccgcccgtcacccggacg 679
|||||||||||||| || ||||||||||||||||| || | ||| || ||||| ||||||
Sbjct: 211 gggccgatcttgggggcaagggacgacgccgcgcccacatagcctccggtcacgcggacg 152
Query: 680 aagacctccaccacctgcgacgggtcgagcttgggcggcatggcg 724
|| || ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 151 aacacatccaccacctgcgtcgggtcgagcttcggcggcatggcg 107
>gb|CF277901.1|CF277901 14ETL--03-J18.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-J18, mRNA sequence
Length = 577
Score = 496 bits (250), Expect = e-138
Identities = 326/350 (93%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 228 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 287
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctcc-ttgacggtgccggccaactc 348
||||||||||| |||||||||||||| || ||||||||| |||||||| ||||||| |||
Sbjct: 288 acggtgcacccaacgctgacgcaggtcccaaggatctccnttgacggtcccggccatctc 347
Query: 349 cttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgat 408
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 348 cttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgat 407
Query: 409 gttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgc 468
||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||
Sbjct: 408 gttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggc 467
Query: 469 cttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttctggac 528
||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 468 cttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacggttctggac 527
Query: 529 ggtgagcttgacggtgacgcgcaggcccttccagtccttggccgtctcct 578
||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 528 ggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 577
>gb|CF276033.1|CF276033 14ETL--01-A11.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-A11, mRNA sequence
Length = 602
Score = 488 bits (246), Expect = e-135
Identities = 316/338 (93%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 324
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 acggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 384
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 385 ttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatg 444
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 445 ttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgcc 504
Query: 470 ttgatgacgagcgcggcggcggaggggacgacggagaccttggcctggcggttct-ggac 528
|||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| || |
Sbjct: 505 ttgatgacaagcgccgcggcggaggggacgacggagaccttggcctgccggttctggggc 564
Query: 529 ggtgagcttgacggtgacgcgcaggcccttccagtcct 566
||||||||| ||||||||||| ||||||||||||||||
Sbjct: 565 ggtgagcttcacggtgacgcggaggcccttccagtcct 602
>gb|D15738.1|D15738 RICC1170A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1170A, mRNA sequence
Length = 442
Score = 450 bits (227), Expect = e-124
Identities = 332/366 (90%), Gaps = 1/366 (0%)
Strand = Plus / Minus
Query: 359 gacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatgttgccgctg 418
|||||| |||||||| ||||| ||||||||| ||| ||||||| |||||||| | |||
Sbjct: 434 gacctggtcctcatgatcctg-cgatctcgattacggcgtcgagactgatgttacaactg 376
Query: 419 tgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgccttgatgacg 478
||||||||||||||||||||||||| ||||| |||||||||||| || ||||||||||||
Sbjct: 375 tgcttgatgttcttgaccttcttcctgtcccgctcgggctccttnagggccttgatgacg 316
Query: 479 agcgcggcggcggaggggacgacggagaccttggcctggcggttctggacggtgagcttg 538
||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 315 agcgccacggcggaggggacgacggacaccttcgcctgacggttctggacggtgagcttg 256
Query: 539 acggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatc 598
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 255 acggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcctcaccgatc 196
Query: 599 ttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgccgcgccgacc 658
||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||| |||
Sbjct: 195 ttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgccgcgcccacc 136
Query: 659 tcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagcttgggcggc 718
||||| || ||||| |||||||| || ||||||||||||| |||||||||||| ||||||
Sbjct: 135 tcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcggcggc 76
Query: 719 atggcg 724
||||||
Sbjct: 75 atggcg 70
>gb|AU083384.1|AU083384 AU083384 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51240, mRNA sequence
Length = 661
Score = 345 bits (174), Expect = 2e-092
Identities = 304/337 (90%), Gaps = 8/337 (2%)
Strand = Plus / Minus
Query: 231 ggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcga 290
|||||||||||||||| || |||||||||||||| ||||||||||||| ||||||||
Sbjct: 427 ggatctcgacctcgccatcggagatctcctgctgcagatccttggggtcct-gccgtcga 369
Query: 291 cggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcct 350
|||||||||| |||||||||||| | || ||||||||||||||||| ||||||| |||||
Sbjct: 368 cggtgcacccaacgctgacgcag-tcccaaggatctccttgacggtcccggccatctcct 310
Query: 351 tggccatggacctgttcc-tcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 309 tggncatggacctgttccctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 250
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgagcgcc 469
|| || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 249 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 190
Query: 470 ttgatgacgagcgcggcggcgg-aggggacgac-ggagaccttggcctggcgg-ttct-g 525
|||||||||||||| ||||||| |||||||||| ||| ||||| ||||| || |||| |
Sbjct: 189 ttgatgacgagcgccgcggcggaaggggacgacgggacaccttcgcctgaaggtttctgg 130
Query: 526 gacggtgagcttgacggtgacgc-gcaggcccttcca 561
||||||||||||||||||||||| | |||||||||||
Sbjct: 129 gacggtgagcttgacggtgacgcgggaggcccttcca 93
>gb|AU093846.1|AU093846 AU093846 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0916, mRNA sequence
Length = 547
Score = 325 bits (164), Expect = 2e-086
Identities = 217/236 (91%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 236 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 177
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 176 acggngcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctcc 117
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| | ||| |||| |||||||||||||||||||
Sbjct: 116 ttggccatggacctgggcctcatgaccctcgngatntcgatgacgtcgtcgaggctgatg 57
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttgag 465
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 56 ttgccgctgtgcttgatgttcttcaccttcttgnggtccctctcgggctccttgag 1
>gb|C73337.1|C73337 C73337 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3812_1A, mRNA sequence
Length = 369
Score = 323 bits (163), Expect = 8e-086
Identities = 249/280 (88%)
Strand = Plus / Minus
Query: 445 gtccctctcgggctccttgagcgccttgatgacgagcgcggcggcggaggggacgacgga 504
||||| |||||||||| |||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 351 gtcccgctcgggctccntgagggccttgattacgagcgccgcggcggaggggacnacgga 292
Query: 505 gaccttggcctggcggttctggacggtgagcttgacggtgacgcgcaggcccttccagtc 564
||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 291 aaccttcgcctgacggttctggacggtgagcttgacggtgaagcggaggcccttccagtc 232
Query: 565 cttggccgtctccttggcgatgtcctcgccgatcttcttcggggagagcccgagcgggcc 624
||||||||||||||||||||||||||| ||||||||||| |||||||| || | |||||
Sbjct: 231 cttggccgtctccttggcgatgtcctcaccgatcttcttgggggagagaccnanagggcc 172
Query: 625 gatcttgggcgccagggacgacgccgcgccgacctcgccgcccgtcacccggacgaagac 684
|| |||||| || |||||||||||||| || |||||||| || || | |||||||| ||
Sbjct: 171 gancttgggggcaagggacgacgccgcacccacctcgcctccggtnangcggacgaaaac 112
Query: 685 ctccaccacctgcgacgggtcgagcttgggcggcatggcg 724
||||||||||||| |||||||||||| ||||||||||||
Sbjct: 111 atccaccacctgcgtcgggtcgagcttcggcggcatggcg 72
>gb|CF293874.1|CF293874 30DGS--03-D08.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-D08, mRNA sequence
Length = 448
Score = 317 bits (160), Expect = 5e-084
Identities = 218/236 (92%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 213 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 272
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctcctt-gacggtgccggccaactc 348
||||||||||| |||||||||||||| || ||||||||||| |||||| ||||||| |||
Sbjct: 273 acggtgcacccaacgctgacgcaggtcccaaggatctcctttgacggtcccggccatctc 332
Query: 349 cttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgat 408
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 333 cttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgat 392
Query: 409 gttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttga 464
||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 393 gttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttga 448
>gb|CV726075.1|CV726075 14Salt--03-I09.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-I09, mRNA sequence
Length = 465
Score = 307 bits (155), Expect = 5e-081
Identities = 212/231 (91%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 235 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 294
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| | ||||| ||||
Sbjct: 295 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcctggccatctcc 354
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 355 ttggccatggacctgttcatcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 414
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctcc 460
|| || |||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 415 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctcc 465
>gb|CV726114.1|CV726114 14Salt--03-J09.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-J09, mRNA sequence
Length = 464
Score = 305 bits (154), Expect = 2e-080
Identities = 211/230 (91%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 235 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 294
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| | ||||| ||||
Sbjct: 295 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcctggccatctcc 354
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 355 ttggccatggacctgttcatcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 414
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctc 459
|| || |||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 415 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 464
>gb|CV727142.1|CV727142 14Salt--05-C09.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--05-C09, mRNA sequence
Length = 486
Score = 305 bits (154), Expect = 2e-080
Identities = 199/214 (92%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 270 gggatctcgacctcgccatcggagatctcctgctgcagatccttggggtccttgccgtcg 329
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
||||||||||| |||||||||||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 330 acggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcccggccatctcc 389
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 390 ttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 449
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttcc 443
|| || ||||||||||||||||||||||||||||
Sbjct: 450 ttaccactgtgcttgatgttcttgaccttcttcc 483
>gb|C73971.1|C73971 C73971 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30051_1A, mRNA sequence
Length = 299
Score = 301 bits (152), Expect = 3e-079
Identities = 214/236 (90%)
Strand = Plus / Minus
Query: 489 cggaggggacgacggagaccttggcctggcggttctggacggtgagcttgacggtgacgc 548
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 299 cggaggggacgacggacaccttcncctgacggttctggacggtgagcttgacggtgacgc 240
Query: 549 gcaggcccttccagtccttggccgtctccttggcgatgtcctcgccgatcttcttcgggg 608
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 239 ggaggcccttccagtccttggccgtctccttggcgatgtcctcaccgatcttcttggggg 180
Query: 609 agagcccgagcgggccgatcttgggcgccagggacgacgccgcgccgacctcgccgcccg 668
|||| ||||| |||||||||||||| || ||||||||| ||||||| ||||| || || |
Sbjct: 179 agagaccgagagggccgatcttgggggcaagggacgacnccgcgcccacctcncctccgg 120
Query: 669 tcacccggacgaagacctccaccacctgcgacgggtcgagcttgggcggcatggcg 724
|||| |||||||| || ||||||||||||| |||||||||||| | ||||||||||
Sbjct: 119 tcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcgncggcatggcg 64
>gb|C98657.1|C98657 C98657 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0916_2A, mRNA sequence
Length = 456
Score = 280 bits (141), Expect = 1e-072
Identities = 210/234 (89%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggtccttggggtccttgccgtcg 289
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 248 gggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggtccttgccgtcc 189
Query: 290 acggtgcacccgacgctgacgcaggtgccgaggatctccttgacggtgccggccaactcc 349
|||||||| |||| | ||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 188 acggtgcagccgaag-tgaagcaggtgccgaggatctccttgacggtgccggccatctcc 130
Query: 350 ttggccatggacctgttcctcatggtcctggcgatctcgacgacgtcgtcgaggctgatg 409
||||||||||||||| ||||||| ||| | |||||||| ||||||||||||| |||||
Sbjct: 129 ttggccatggacctgggcctcatganccttgngatctcgatgacgtcgtcgaggntgatg 70
Query: 410 ttgccgctgtgcttgatgttcttgaccttcttccggtccctctcgggctccttg 463
||||||||||||||||||||||| ||| |||| |||| ||| | ||||||||||
Sbjct: 69 ttgccgctgtgcttgatgttcttnaccntcttgcggtncctttngggctccttg 16
>gb|D22680.1|D22680 RICC0892A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0892_1A, mRNA sequence
Length = 297
Score = 258 bits (130), Expect = 4e-066
Identities = 203/228 (89%), Gaps = 1/228 (0%)
Strand = Plus / Minus
Query: 497 acgacggagaccttggcctggc-ggttctggacggtgagcttgacggtgacgcgcaggcc 555
|||||| |||||||| ||| | ||||||| ||||||||||| ||||||||||| || ||
Sbjct: 296 acgacgnagaccttgncctncccggttctgnacggtgagcttcacggtgacgcgnagacc 237
Query: 556 cttccagtccttggccgtctccttggcgatgtcctcgccgatcttcttcggggagagccc 615
||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 236 cttccagtccttggcggtctccttggcgatgtcctctccgatcttcttnggggagagacc 177
Query: 616 gagcgggccgatcttgggcgccagggacgacgccgcgccgacctcgccgcccgtcacccg 675
|||||| ||||||||||| || || |||||||||||||||||||| ||||| ||||| ||
Sbjct: 176 gagcggcccgatcttgggggcgagcgacgacgccgcgccgacctcaccgccggtcacgcg 117
Query: 676 gacgaagacctccaccacctgcgacgggtcgagcttgggcggcatggc 723
|||||| || ||||||||||| | |||||||||||| |||||||||||
Sbjct: 116 gacgaacacatccaccacctgggtcgggtcgagcttcggcggcatggc 69
>gb|AQ331053.1|AQ331053 nbxb0048L05r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0048L05r, DNA sequence
Length = 680
Score = 252 bits (127), Expect = 2e-064
Identities = 175/191 (91%)
Strand = Plus / Minus
Query: 534 gcttgacggtgacgcgcaggcccttccagtccttggccgtctccttggcgatgtcctcgc 593
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 393 gcttgacggtgacgcggaggcccttccagtccatggccgtctccttggcgatgtcctcac 334
Query: 594 cgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgccgcgc 653
|||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||
Sbjct: 333 cgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgccgcgc 274
Query: 654 cgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagcttgg 713
| |||||||| || ||||| |||||||| || ||||||||||||| |||||||||||| |
Sbjct: 273 ccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcg 214
Query: 714 gcggcatggcg 724
|||||||||||
Sbjct: 213 gcggcatggcg 203
>gb|D15345.2|D15345 RICC0491A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0491A, mRNA sequence
Length = 267
Score = 226 bits (114), Expect = 1e-056
Identities = 175/196 (89%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 530 gtgagcttgacggtgacgcgcaggccctt-ccagtccttggccgtctccttggcgatgtc 588
|||||||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 267 gtgagcttnacggtnacncgnaggcccttnccagtccttggccgtctccttggcgatgtc 208
Query: 589 ctcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggacgacgc 648
||| ||||||||||| || |||| ||||| |||||||||||||| || |||||||||||
Sbjct: 207 ctcaccgatcttcttgnggnagagaccgagagggccgatcttgggggcaagggacgacgc 148
Query: 649 cgcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgag 708
|||||| |||||||| || ||||| |||||||| || ||||||||||||| |||||||||
Sbjct: 147 cgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgag 88
Query: 709 cttgggcggcatggcg 724
||| ||||||||||||
Sbjct: 87 cttcggcggcatggcg 72
>gb|AQ365974.2|AQ365974 nbxb0064J04f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0064J04f, DNA sequence
Length = 324
Score = 141 bits (71), Expect = 6e-031
Identities = 107/119 (89%)
Strand = Plus / Minus
Query: 606 gggagagcccgagcgggccgatcttgggcgccagggacgacgccgcgccgacctcgccgc 665
||||||| ||||| |||||||||||||| || ||||||||||||||||| |||||||| |
Sbjct: 323 gggagagaccgagagggccgatcttgggggcaagggacgacgccgcgcccacctcgcctc 264
Query: 666 ccgtcacccggacgaagacctccaccacctgcgacgggtcgagcttgggcggcatggcg 724
| ||||| |||||||| || ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 263 cggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcggcggcatggcg 205
>gb|D39887.1|D39887 RICS1534A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 242
Score = 127 bits (64), Expect = 9e-027
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 584 atgtcctcgccgatcttcttcggggagagcccgagcgggccgatcttgggcgccagggac 643
|||||||| || |||||||||||| | || || ||||| ||||||||||| | | |||
Sbjct: 242 atgtcctctccnatcttcttcgggaaaagaccnagcggcccgatcttggggccgancgac 183
Query: 644 gacgccgcgccgacctcgccgcccgtcacccggacgaagacctccaccacctgcgacggg 703
||||||||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||
Sbjct: 182 gacgccgcgccgacctcaccgccggtcacgcggacgaanacatccaccacctgggtcggg 123
Query: 704 tcgagcttgggcggcatggc 723
|||||||| |||||||||||
Sbjct: 122 tcgagcttcggcggcatggc 103
>gb|AQ796940.1|AQ796940 nbxb0071D13f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0071D13f, DNA sequence
Length = 709
Score = 121 bits (61), Expect = 6e-025
Identities = 112/128 (87%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 254 atctcctgctgcaggtccttggggtccttgccgtcgacggtgcacccga-cgctgacgca 312
||||||||||||| |||||||||| ||||||||||||||||||||| | |||| ||||
Sbjct: 557 atctcctgctgcaaatccttggggtncttgccgtcgacggtgcaccccaacgcttgcgca 616
Query: 313 ggtgccgaggatctccttgacggtgccggccaactccttggccatggacctgttcctcat 372
||| || | |||||||||||| || |||| || |||||||| ||||||||||||||||||
Sbjct: 617 ggtccccaagatctccttgaccgtcccgggcatctccttgggcatggacctgttcctcat 676
Query: 373 ggtcctgg 380
| ||||||
Sbjct: 677 gatcctgg 684
>gb|CF297965.1|CF297965 7LEAF--01-C13.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--01-C13, mRNA sequence
Length = 117
Score = 81.8 bits (41), Expect = 5e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 656 acctcgccgcccgtcacccggacgaagacctccaccacctgcgacgggtcgagcttgggc 715
|||||||| || ||||| |||||||| || ||||||||||||| |||||||||||| |||
Sbjct: 114 acctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcggc 55
Query: 716 ggcatggcg 724
|||||||||
Sbjct: 54 ggcatggcg 46
>gb|AQ364344.1|AQ364344 nbxb0060J06r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0060J06r, DNA sequence
Length = 740
Score = 48.1 bits (24), Expect = 0.007
Identities = 80/96 (83%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 230 gggatctcgacctcgccgtcatcaatctcctgctgcaggt-ccttggggtccttgccgtc 288
||||||||||||||||| || ||||| ||| ||||| | |||||||| ||| |||| |
Sbjct: 533 gggatctcgacctcgccatcggaaatcttctgttgcagattccttggggccct-gccggc 591
Query: 289 gacggtgcacccgacgctgacgcaggtgccgaggat 324
|||||||||||| ||| |||| ||||| || |||||
Sbjct: 592 gacggtgcacccaacgttgactcaggtcccaaggat 627
>dbj|AK101830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068I24, full
insert sequence
Length = 2539
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 712 gggcggcatggcggcggcggcg 733
||||||||||||||||||||||
Sbjct: 104 gggcggcatggcggcggcggcg 83
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 147355
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 381 cgatctcgacgacgtcgtcgaggctg 406
||||||||||||||||| ||||||||
Sbjct: 109880 cgatctcgacgacgtcggcgaggctg 109905
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0058I18
Length = 151453
Score = 44.1 bits (22), Expect = 0.11
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 712 gggcggcatggcggcggcggcg 733
||||||||||||||||||||||
Sbjct: 147836 gggcggcatggcggcggcggcg 147815
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0008C11
Length = 157205
Score = 44.1 bits (22), Expect = 0.11
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 475 gacgagcgcggcggcggaggggacgacgga 504
||||||||||||||||||| ||||| ||||
Sbjct: 111555 gacgagcgcggcggcggagcggacggcgga 111526
>ref|NT_107158.1| Oryza sativa (japonica cultivar-group)
Length = 828812
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 381 cgatctcgacgacgtcgtcgaggctg 406
||||||||||||||||| ||||||||
Sbjct: 37476 cgatctcgacgacgtcggcgaggctg 37451
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,043,255
Number of Sequences: 438736
Number of extensions: 2043255
Number of successful extensions: 27180
Number of sequences better than 0.5: 77
Number of HSP's better than 0.5 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25957
Number of HSP's gapped (non-prelim): 1179
length of query: 733
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 712
effective length of database: 2,791,206,460
effective search space: 1987338999520
effective search space used: 1987338999520
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)