BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.3
(985 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB666264.1|CB666264 OSJNEd13B15.f OSJNEd Oryza sativa (j... 761 0.0
dbj|AK121709.1| Oryza sativa (japonica cultivar-group) cDNA... 761 0.0
ref|XM_467310.1| Oryza sativa (japonica cultivar-group), mRNA 761 0.0
gb|AACV01005232.1| Oryza sativa (japonica cultivar-group) c... 759 0.0
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 759 0.0
dbj|AP004778.3| Oryza sativa (japonica cultivar-group) geno... 759 0.0
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 759 0.0
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 759 0.0
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 759 0.0
gb|CB666265.1|CB666265 OSJNEd13B15.r OSJNEd Oryza sativa (j... 749 0.0
gb|CF277900.1|CF277900 14ETL--03-J18.b1 Rice etiolated leaf... 690 0.0
gb|CF293873.1|CF293873 30DGS--03-D08.b1 Rice leaf plasmid c... 690 0.0
gb|AACV01010423.1| Oryza sativa (japonica cultivar-group) c... 690 0.0
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 690 0.0
ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BA... 690 0.0
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 690 0.0
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 690 0.0
emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromoso... 690 0.0
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 690 0.0
ref|XM_462686.1| Oryza sativa (japonica cultivar-group), p... 684 0.0
ref|XM_473741.1| Oryza sativa (japonica cultivar-group), p... 684 0.0
gb|CF276032.1|CF276032 14ETL--01-A11.b1 Rice etiolated leaf... 644 0.0
gb|AU062881.2|AU062881 AU062881 Rice callus Oryza sativa (j... 575 e-161
gb|CV726113.1|CV726113 14Salt--03-J09.b1 Salt treated rice ... 563 e-158
gb|CV726074.1|CV726074 14Salt--03-I09.b1 Salt treated rice ... 547 e-153
gb|CF276033.1|CF276033 14ETL--01-A11.g1 Rice etiolated leaf... 519 e-145
gb|CF277901.1|CF277901 14ETL--03-J18.g1 Rice etiolated leaf... 492 e-136
gb|D15738.1|D15738 RICC1170A Rice callus Oryza sativa (japo... 456 e-125
gb|AU083384.1|AU083384 AU083384 Rice callus Oryza sativa (j... 337 7e-090
gb|AU093846.1|AU093846 AU093846 Rice panicle at flowering s... 333 1e-088
gb|C73337.1|C73337 C73337 Rice panicle at flowering stage O... 329 2e-087
gb|C73971.1|C73971 C73971 Rice panicle shorter than 3cm Ory... 315 3e-083
gb|CF293874.1|CF293874 30DGS--03-D08.g1 Rice leaf plasmid c... 297 6e-078
gb|CV727142.1|CV727142 14Salt--05-C09.g1 Salt treated rice ... 297 6e-078
gb|D22680.1|D22680 RICC0892A Rice callus Oryza sativa (japo... 293 9e-077
gb|C98657.1|C98657 C98657 Rice panicle at flowering stage O... 287 6e-075
gb|CV726075.1|CV726075 14Salt--03-I09.g1 Salt treated rice ... 287 6e-075
gb|CV726114.1|CV726114 14Salt--03-J09.g1 Salt treated rice ... 285 2e-074
gb|AQ331053.1|AQ331053 nbxb0048L05r CUGI Rice BAC Library O... 266 2e-068
gb|D15345.2|D15345 RICC0491A Rice callus Oryza sativa (japo... 232 3e-058
gb|D39887.1|D39887 RICS1534A Rice shoot Oryza sativa (japon... 155 5e-035
gb|AQ365974.2|AQ365974 nbxb0064J04f CUGI Rice BAC Library O... 139 3e-030
gb|AQ796940.1|AQ796940 nbxb0071D13f CUGI Rice BAC Library O... 109 3e-021
gb|CF297965.1|CF297965 7LEAF--01-C13.g1 Rice leaf plasmid c... 96 4e-017
gb|AQ364344.1|AQ364344 nbxb0060J06r CUGI Rice BAC Library O... 52 6e-004
gb|D22679.1|D22679 RICC0892B Rice callus Oryza sativa (japo... 48 0.009
>gb|CB666264.1|CB666264 OSJNEd13B15.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13B15 5', mRNA sequence
Length = 761
Score = 761 bits (384), Expect = 0.0
Identities = 483/516 (93%)
Strand = Plus / Minus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 546 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 487
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 486 ccttggggtccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctcct 427
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 426 tgacggtgccggccatctccttggccatggacctgggcctcatgaccctcgcgatctcga 367
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 366 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccc 307
Query: 654 tctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 713
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctcgggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 247
Query: 714 tggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttgg 773
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 246 tggcctgccggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttgg 187
Query: 774 ccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatct 833
| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 186 cggtctccttggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatct 127
Query: 834 tgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctcca 893
||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 126 tgggggcgagcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatcca 67
Query: 894 ccacctgcgacgggtcgagcttgggcggcatggctg 929
||||||| | |||||||||||| |||||||||||||
Sbjct: 66 ccacctgggtcgggtcgagcttcggcggcatggctg 31
>dbj|AK121709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076B01, full
insert sequence
Length = 831
Score = 761 bits (384), Expect = 0.0
Identities = 483/516 (93%)
Strand = Plus / Minus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 596 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 537
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 536 ccttggggtccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctcct 477
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 476 tgacggtgccggccatctccttggccatggacctgggcctcatgaccctcgcgatctcga 417
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 416 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccc 357
Query: 654 tctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 713
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tctcgggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 297
Query: 714 tggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttgg 773
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 296 tggcctgccggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttgg 237
Query: 774 ccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatct 833
| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 236 cggtctccttggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatct 177
Query: 834 tgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctcca 893
||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 176 tgggggcgagcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatcca 117
Query: 894 ccacctgcgacgggtcgagcttgggcggcatggctg 929
||||||| | |||||||||||| |||||||||||||
Sbjct: 116 ccacctgggtcgggtcgagcttcggcggcatggctg 81
>ref|XM_467310.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 831
Score = 761 bits (384), Expect = 0.0
Identities = 483/516 (93%)
Strand = Plus / Minus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 596 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 537
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 536 ccttggggtccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctcct 477
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 476 tgacggtgccggccatctccttggccatggacctgggcctcatgaccctcgcgatctcga 417
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 416 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccc 357
Query: 654 tctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 713
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tctcgggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 297
Query: 714 tggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttgg 773
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 296 tggcctgccggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttgg 237
Query: 774 ccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatct 833
| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 236 cggtctccttggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatct 177
Query: 834 tgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctcca 893
||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 176 tgggggcgagcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatcca 117
Query: 894 ccacctgcgacgggtcgagcttgggcggcatggctg 929
||||||| | |||||||||||| |||||||||||||
Sbjct: 116 ccacctgggtcgggtcgagcttcggcggcatggctg 81
>gb|AACV01005232.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005232, whole
genome shotgun sequence
Length = 45807
Score = 759 bits (383), Expect = 0.0
Identities = 476/507 (93%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggt 482
||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 34729 cttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggt 34670
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 34669 ccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgc 34610
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 34609 cggccatctccttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgt 34550
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 34549 cgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggct 34490
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34489 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 34430
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 34429 ggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttggcggtctcct 34370
Query: 783 tggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggcca 842
||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
Sbjct: 34369 tggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatcttgggggcga 34310
Query: 843 gcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcg 902
|||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 34309 gcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatccaccacctggg 34250
Query: 903 acgggtcgagcttgggcggcatggctg 929
|||||||||||| |||||||||||||
Sbjct: 34249 tcgggtcgagcttcggcggcatggctg 34223
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 759 bits (383), Expect = 0.0
Identities = 476/507 (93%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggt 482
||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 3957012 cttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggt 3956953
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3956952 ccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgc 3956893
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 3956892 cggccatctccttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgt 3956833
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 3956832 cgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggct 3956773
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3956772 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 3956713
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 3956712 ggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttggcggtctcct 3956653
Query: 783 tggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggcca 842
||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
Sbjct: 3956652 tggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatcttgggggcga 3956593
Query: 843 gcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcg 902
|||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 3956592 gcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatccaccacctggg 3956533
Query: 903 acgggtcgagcttgggcggcatggctg 929
|||||||||||| |||||||||||||
Sbjct: 3956532 tcgggtcgagcttcggcggcatggctg 3956506
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0459B01
Length = 163087
Score = 759 bits (383), Expect = 0.0
Identities = 476/507 (93%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggt 482
||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 108586 cttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggt 108527
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 108526 ccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgc 108467
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 108466 cggccatctccttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgt 108407
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 108406 cgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggct 108347
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108346 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 108287
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 108286 ggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttggcggtctcct 108227
Query: 783 tggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggcca 842
||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
Sbjct: 108226 tggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatcttgggggcga 108167
Query: 843 gcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcg 902
|||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 108166 gcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatccaccacctggg 108107
Query: 903 acgggtcgagcttgggcggcatggctg 929
|||||||||||| |||||||||||||
Sbjct: 108106 tcgggtcgagcttcggcggcatggctg 108080
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 759 bits (383), Expect = 0.0
Identities = 476/507 (93%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggt 482
||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 15302100 cttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggt 15302041
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 15302040 ccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgc 15301981
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 15301980 cggccatctccttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgt 15301921
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 15301920 cgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggct 15301861
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15301860 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 15301801
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 15301800 ggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttggcggtctcct 15301741
Query: 783 tggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggcca 842
||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
Sbjct: 15301740 tggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatcttgggggcga 15301681
Query: 843 gcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcg 902
|||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 15301680 gcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatccaccacctggg 15301621
Query: 903 acgggtcgagcttgggcggcatggctg 929
|||||||||||| |||||||||||||
Sbjct: 15301620 tcgggtcgagcttcggcggcatggctg 15301594
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 759 bits (383), Expect = 0.0
Identities = 476/507 (93%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggt 482
||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 28755164 cttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggt 28755105
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 28755104 ccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgc 28755045
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 28755044 cggccatctccttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgt 28754985
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 28754984 cgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggct 28754925
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28754924 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 28754865
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 28754864 ggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttggcggtctcct 28754805
Query: 783 tggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggcca 842
||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
Sbjct: 28754804 tggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatcttgggggcga 28754745
Query: 843 gcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcg 902
|||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 28754744 gcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatccaccacctggg 28754685
Query: 903 acgggtcgagcttgggcggcatggctg 929
|||||||||||| |||||||||||||
Sbjct: 28754684 tcgggtcgagcttcggcggcatggctg 28754658
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 759 bits (383), Expect = 0.0
Identities = 476/507 (93%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggt 482
||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 28792013 cttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggtccttggggt 28791954
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 28791953 ccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgc 28791894
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 28791893 cggccatctccttggccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgt 28791834
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 28791833 cgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggct 28791774
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28791773 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 28791714
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 28791713 ggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttggcggtctcct 28791654
Query: 783 tggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggcca 842
||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
Sbjct: 28791653 tggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatcttgggggcga 28791594
Query: 843 gcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcg 902
|||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 28791593 gcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatccaccacctggg 28791534
Query: 903 acgggtcgagcttgggcggcatggctg 929
|||||||||||| |||||||||||||
Sbjct: 28791533 tcgggtcgagcttcggcggcatggctg 28791507
>gb|CB666265.1|CB666265 OSJNEd13B15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13B15 3', mRNA sequence
Length = 733
Score = 749 bits (378), Expect = 0.0
Identities = 480/514 (93%)
Strand = Plus / Plus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 220 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 279
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 280 ccttggggtccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctcct 339
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 340 tgacggtgccggccatctccttggccatggacctgggcctcatgaccctcgcgatctcga 399
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 400 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccc 459
Query: 654 tctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 713
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 460 tctcgggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggaaacct 519
Query: 714 tggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttgg 773
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 520 tggcctgccggttctggacggtgagcttcacggtgacgcggaggcccttccagtccttgg 579
Query: 774 ccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatct 833
| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 580 cggtctccttggcgatgtcctctccgatcttcttcggggagagaccgagcggcccgatct 639
Query: 834 tgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctcca 893
||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 640 tgggggcgagcgacgacgccgcgccgacctcaccgccggtcacgcggacgaacacatcca 699
Query: 894 ccacctgcgacgggtcgagcttgggcggcatggc 927
||||||| | |||||||||||| |||||||||||
Sbjct: 700 ccacctgggtcgggtcgagcttcggcggcatggc 733
>gb|CF277900.1|CF277900 14ETL--03-J18.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-J18, mRNA sequence
Length = 706
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 626 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 567
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 566 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 507
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 506 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 447
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 446 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 387
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 386 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 327
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 267
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 266 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 207
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 206 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 147
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 146 cgggtcgagcttcggcggcatggc 123
>gb|CF293873.1|CF293873 30DGS--03-D08.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-D08, mRNA sequence
Length = 675
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 620 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 561
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 560 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 501
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 500 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 441
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 440 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 381
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 380 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 321
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 261
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 260 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 201
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 200 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 141
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 140 cgggtcgagcttcggcggcatggc 117
>gb|AACV01010423.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010423, whole
genome shotgun sequence
Length = 68448
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 66846 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 66787
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 66786 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 66727
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 66726 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 66667
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 66666 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 66607
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 66606 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 66547
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66546 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 66487
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 66486 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 66427
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 66426 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 66367
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 66366 cgggtcgagcttcggcggcatggc 66343
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 111448 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 111389
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 111388 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 111329
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 111328 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 111269
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 111268 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 111209
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 111208 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 111149
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111148 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 111089
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 111088 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 111029
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 111028 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 110969
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 110968 cgggtcgagcttcggcggcatggc 110945
>ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093F12,
complete sequence
Length = 186339
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 111448 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 111389
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 111388 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 111329
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 111328 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 111269
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 111268 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 111209
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 111208 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 111149
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111148 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 111089
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 111088 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 111029
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 111028 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 110969
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 110968 cgggtcgagcttcggcggcatggc 110945
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 7935982 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 7935923
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 7935922 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 7935863
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 7935862 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 7935803
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 7935802 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 7935743
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 7935742 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 7935683
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7935682 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 7935623
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 7935622 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 7935563
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 7935562 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 7935503
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 7935502 cgggtcgagcttcggcggcatggc 7935479
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 27080081 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 27080022
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 27080021 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 27079962
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 27079961 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 27079902
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 27079901 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 27079842
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 27079841 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 27079782
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27079781 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 27079722
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 27079721 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 27079662
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 27079661 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 27079602
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 27079601 cgggtcgagcttcggcggcatggc 27079578
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
complete sequence
Length = 186142
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 111228 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 111169
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 111168 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 111109
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 111108 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 111049
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 111048 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 110989
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 110988 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 110929
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110928 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 110869
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 110868 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 110809
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 110808 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 110749
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 110748 cgggtcgagcttcggcggcatggc 110725
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 690 bits (348), Expect = 0.0
Identities = 465/504 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 30214937 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 30214878
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 30214877 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 30214818
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 30214817 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 30214758
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 30214757 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 30214698
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 30214697 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 30214638
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30214637 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 30214578
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 30214577 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 30214518
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 30214517 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 30214458
Query: 904 cgggtcgagcttgggcggcatggc 927
|||||||||||| |||||||||||
Sbjct: 30214457 cgggtcgagcttcggcggcatggc 30214434
>ref|XM_462686.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 501
Score = 684 bits (345), Expect = 0.0
Identities = 462/501 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 501 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 442
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 441 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 382
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 381 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 322
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 321 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 262
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 261 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 202
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 142
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 141 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 82
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 81 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 22
Query: 904 cgggtcgagcttgggcggcat 924
|||||||||||| ||||||||
Sbjct: 21 cgggtcgagcttcggcggcat 1
>ref|XM_473741.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 501
Score = 684 bits (345), Expect = 0.0
Identities = 462/501 (92%)
Strand = Plus / Minus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 501 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 442
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 441 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 382
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 381 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 322
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 321 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 262
Query: 664 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 723
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 261 cttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgacg 202
Query: 724 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcctt 142
Query: 784 ggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccag 843
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 141 ggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttgggggcaag 82
Query: 844 cgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcga 903
|| ||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 81 ggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgt 22
Query: 904 cgggtcgagcttgggcggcat 924
|||||||||||| ||||||||
Sbjct: 21 cgggtcgagcttcggcggcat 1
>gb|CF276032.1|CF276032 14ETL--01-A11.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-A11, mRNA sequence
Length = 440
Score = 644 bits (325), Expect = 0.0
Identities = 407/433 (93%), Gaps = 1/433 (0%)
Strand = Plus / Minus
Query: 498 tgcacccgacgctgacgcaggtaccgaggatctcc-ttgacggtgccggccaattccttg 556
|||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 440 tgcagccgacgctgacgcaggtgccgaggatctcccttgacggtgccggccatctccttg 381
Query: 557 gccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtcgaggctgatgttg 616
|||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 380 gccatggacctgggcctcatgaccctcgcgatctcgatgacgtcgtcgaggctgatgttg 321
Query: 617 ccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctccttgagcgccttg 676
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 320 ccgctgtgcttgatgttcttcaccttcttgcggtccctctcgggctccttgagcgccttg 261
Query: 677 atgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctggacggtg 736
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 atgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgggcggtg 201
Query: 737 agcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcctct 796
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 200 agcttcacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctct 141
Query: 797 ccgatcttcttgggggaaagaccgagcgggccgatcttgggggccagcgaagacgctgcg 856
||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 140 ccgatcttcttcggggagagaccgagcggcccgatcttgggggcgagcgacgacgccgcg 81
Query: 857 ccgacctcgccgccggtcacacggacgaacacctccaccacctgcgacgggtcgagcttg 916
|||||||| ||||||||||| ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 80 ccgacctcaccgccggtcacgcggacgaacacatccaccacctgggtcgggtcgagcttc 21
Query: 917 ggcggcatggctg 929
|||||||||||||
Sbjct: 20 ggcggcatggctg 8
>gb|AU062881.2|AU062881 AU062881 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51240_7A, mRNA sequence
Length = 420
Score = 575 bits (290), Expect = e-161
Identities = 391/422 (92%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 476 ttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttg 535
||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||
Sbjct: 420 ttggggtccttgccgtcgacggtgcacccaacg-tgacgcaggtcccaaggatctccttg 362
Query: 536 acggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatg 595
||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 361 acggtcccggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatg 302
Query: 596 acgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctc 655
|||||||||||||||||||| || |||||||||||||||||||||||||| | ||||| |
Sbjct: 301 acgtcgtcgaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgc 242
Query: 656 tctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttg 715
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 241 tcgggctccttgagggccttgatgacgagcgccgcggcggaggggacgacggaca-cttc 183
Query: 716 gcctgccggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggcc 775
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcctgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggcc 123
Query: 776 gtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttg 835
|||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 122 gtctccttggcgatgtcctcaccgatcttcttgggggagagaccgagagggccgatcttg 63
Query: 836 ggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacgaacacctccacc 895
||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 62 ggggcaagggacgacgccgcgcccacctcgcctccggtcacgcggacgaacacatccacc 3
Query: 896 ac 897
||
Sbjct: 2 ac 1
>gb|CV726113.1|CV726113 14Salt--03-J09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-J09, mRNA sequence
Length = 532
Score = 563 bits (284), Expect = e-158
Identities = 374/404 (92%)
Strand = Plus / Minus
Query: 524 aggatctccttgacggtgccggccaattccttggccatggacctgtgcctcatggtcctg 583
||||||||||||||||| | ||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 528 aggatctccttgacggtcctggccatctccttggccatggacctgttcatcatgatcctg 469
Query: 584 gcgatctcgatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttc 643
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 468 gcgatctcgatgacgtcgtcgaggctgatgttaccactgtgcttgatgttcttgaccttc 409
Query: 644 ttgcggtccctctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacg 703
|| | ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 408 ttcctgtcccgctcgggctccttgagggccttgatgacgagcgccgcggcggaggggacg 349
Query: 704 acggagaccttggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttc 763
||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 acggacaccttcgcctgacggttctggacggtgagcttgacggtgacgcggaggcccttc 289
Query: 764 cagtccttggccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagc 823
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 288 cagtccttggccgtctccttggcgatgtcctcaccgatcttcttgggggagagaccgaga 229
Query: 824 gggccgatcttgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacg 883
||||||||||||||||| || || ||||| ||||| |||||||| |||||||| ||||||
Sbjct: 228 gggccgatcttgggggcaagggacgacgccgcgcccacctcgcctccggtcacgcggacg 169
Query: 884 aacacctccaccacctgcgacgggtcgagcttgggcggcatggc 927
||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct: 168 aacacatccaccacctgcgtcgggtcgagcttcggcggcatggc 125
>gb|CV726074.1|CV726074 14Salt--03-I09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-I09, mRNA sequence
Length = 516
Score = 547 bits (276), Expect = e-153
Identities = 372/404 (92%)
Strand = Plus / Minus
Query: 524 aggatctccttgacggtgccggccaattccttggccatggacctgtgcctcatggtcctg 583
||||||||||||||||| | ||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 511 aggatctccttgacggtcctggccatctccttggccatggacctgttcatcatgatcctg 452
Query: 584 gcgatctcgatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttc 643
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 451 gcgatctcgatgacgtcgtcgaggctgatgttaccactgtgcttgatgttcttgaccttc 392
Query: 644 ttgcggtccctctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacg 703
|| | ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 391 ttcctgtcccgctcgggctccttgagggccttgatgacgagcgccgcggcggaggggacg 332
Query: 704 acggagaccttggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttc 763
||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acggacaccttcgcctgacggttctggacggtgagcttgacggtgacgcggaggcccttc 272
Query: 764 cagtccttggccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagc 823
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 271 cagtccttggccgtctccttggcgatgtcctcaccgatcttcttgggggagagaccgaga 212
Query: 824 gggccgatcttgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacg 883
||||||||||||||||| || || ||||| ||||| || | ||| |||||||| ||||||
Sbjct: 211 gggccgatcttgggggcaagggacgacgccgcgcccacatagcctccggtcacgcggacg 152
Query: 884 aacacctccaccacctgcgacgggtcgagcttgggcggcatggc 927
||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct: 151 aacacatccaccacctgcgtcgggtcgagcttcggcggcatggc 108
>gb|CF276033.1|CF276033 14ETL--01-A11.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-A11, mRNA sequence
Length = 602
Score = 519 bits (262), Expect = e-145
Identities = 335/358 (93%), Gaps = 1/358 (0%)
Strand = Plus / Plus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 245 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 304
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 305 ccttggggtccttgccgtccacggtgcagccgacgctgacgcaggtgccgaggatctcct 364
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 365 tgacggtgccggccatctccttggccatggacctgggcctcatgaccctcgcgatctcga 424
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 425 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgcggtccc 484
Query: 654 tctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacct 713
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 485 tctcgggctccttgagcgccttgatgacaagcgccgcggcggaggggacgacggagacct 544
Query: 714 tggcctgccggttct-ggacggtgagcttgacggtgacgcggaggcccttccagtcct 770
||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 545 tggcctgccggttctggggcggtgagcttcacggtgacgcggaggcccttccagtcct 602
>gb|CF277901.1|CF277901 14ETL--03-J18.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-J18, mRNA sequence
Length = 577
Score = 492 bits (248), Expect = e-136
Identities = 333/360 (92%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 218 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 277
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcc-ttgacggtgc 542
||||||||||||||||||||| |||||||||||||| || ||||||||| |||||||| |
Sbjct: 278 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccnttgacggtcc 337
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 338 cggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgt 397
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
||||||||||||| || |||||||||||||||||||||||||| | ||||| ||| ||||
Sbjct: 398 cgaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggct 457
Query: 663 ccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgcc 722
||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 458 ccttgagggccttgatgacgagcgccgcggcggaggggacgacggacaccttcgcctgac 517
Query: 723 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtctcct 577
>gb|D15738.1|D15738 RICC1170A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1170A, mRNA sequence
Length = 442
Score = 456 bits (230), Expect = e-125
Identities = 326/357 (91%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 571 cctcatggtcctggcgatctcgatgacgtcgtcgaggctgatgttgccgctgtgcttgat 630
||||||| ||||| |||||||||| ||| ||||||| |||||||| | |||||||||||
Sbjct: 426 cctcatgatcctg-cgatctcgattacggcgtcgagactgatgttacaactgtgcttgat 368
Query: 631 gttcttgaccttcttgcggtccctctctggctccttgagcgccttgatgacgagcgccgc 690
||||||||||||||| | ||||| ||| |||||||| || |||||||||||||||||| |
Sbjct: 367 gttcttgaccttcttcctgtcccgctcgggctccttnagggccttgatgacgagcgccac 308
Query: 691 ggcggaggggacgacggagaccttggcctgccggttctggacggtgagcttgacggtgac 750
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 307 ggcggaggggacgacggacaccttcgcctgacggttctggacggtgagcttgacggtgac 248
Query: 751 gcggaggcccttccagtccttggccgtctccttggcgatgtcctctccgatcttcttggg 810
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 247 gcggaggcccttccagtccttggccgtctccttggcgatgtcctcaccgatcttcttggg 188
Query: 811 ggaaagaccgagcgggccgatcttgggggccagcgaagacgctgcgccgacctcgccgcc 870
||| |||||||| ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 187 ggagagaccgagagggccgatcttgggggcaagggacgacgccgcgcccacctcgcctcc 128
Query: 871 ggtcacacggacgaacacctccaccacctgcgacgggtcgagcttgggcggcatggc 927
|||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct: 127 ggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcggcggcatggc 71
>gb|AU083384.1|AU083384 AU083384 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51240, mRNA sequence
Length = 661
Score = 337 bits (170), Expect = 7e-090
Identities = 303/337 (89%), Gaps = 8/337 (2%)
Strand = Plus / Minus
Query: 435 ggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtccttgccgtcga 494
||||||| |||||||| ||| |||||||||||||| ||||||||||||| ||||||||
Sbjct: 427 ggatctcgacctcgccatcggagatctcctgctgcagatccttggggtcct-gccgtcga 369
Query: 495 cggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgccggccaattcct 554
|||||||||| |||||||||||| | || ||||||||||||||||| ||||||| ||||
Sbjct: 368 cggtgcacccaacgctgacgcag-tcccaaggatctccttgacggtcccggccatctcct 310
Query: 555 tggccatggacctgtgcc-tcatggtcctggcgatctcgatgacgtcgtcgaggctgatg 613
||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 309 tggncatggacctgttccctcatgatcctggcgatctcgatgacgtcgtcgaggctgatg 250
Query: 614 ttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctccttgagcgcc 673
|| || |||||||||||||||||||||||||| | ||||| ||| ||||||||||| |||
Sbjct: 249 ttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctccttgagggcc 190
Query: 674 ttgatgacgagcgccgcggcgg-aggggacgac-ggagaccttggcctgccgg-ttct-g 729
|||||||||||||||||||||| |||||||||| ||| ||||| ||||| || |||| |
Sbjct: 189 ttgatgacgagcgccgcggcggaaggggacgacgggacaccttcgcctgaaggtttctgg 130
Query: 730 gacggtgagcttgacggtgacgc-ggaggcccttcca 765
||||||||||||||||||||||| |||||||||||||
Sbjct: 129 gacggtgagcttgacggtgacgcgggaggcccttcca 93
>gb|AU093846.1|AU093846 AU093846 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0916, mRNA sequence
Length = 547
Score = 333 bits (168), Expect = 1e-088
Identities = 233/256 (91%)
Strand = Plus / Minus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 256 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 197
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||
Sbjct: 196 ccttggggtccttgccgtccacggngcagccgacgctgacgcaggtgccgaggatctcct 137
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| | ||| ||||
Sbjct: 136 tgacggtgccggccatctccttggccatggacctgggcctcatgaccctcgngatntcga 77
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 76 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttcaccttcttgnggtccc 17
Query: 654 tctctggctccttgag 669
|||| |||||||||||
Sbjct: 16 tctcgggctccttgag 1
>gb|C73337.1|C73337 C73337 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3812_1A, mRNA sequence
Length = 369
Score = 329 bits (166), Expect = 2e-087
Identities = 249/279 (89%)
Strand = Plus / Minus
Query: 649 gtccctctctggctccttgagcgccttgatgacgagcgccgcggcggaggggacgacgga 708
||||| ||| |||||| |||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 351 gtcccgctcgggctccntgagggccttgattacgagcgccgcggcggaggggacnacgga 292
Query: 709 gaccttggcctgccggttctggacggtgagcttgacggtgacgcggaggcccttccagtc 768
||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 291 aaccttcgcctgacggttctggacggtgagcttgacggtgaagcggaggcccttccagtc 232
Query: 769 cttggccgtctccttggcgatgtcctctccgatcttcttgggggaaagaccgagcgggcc 828
||||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||||
Sbjct: 231 cttggccgtctccttggcgatgtcctcaccgatcttcttgggggagagaccnanagggcc 172
Query: 829 gatcttgggggccagcgaagacgctgcgccgacctcgccgccggtcacacggacgaacac 888
|| ||||||||| || || ||||| || || |||||||| ||||| | |||||||| ||
Sbjct: 171 gancttgggggcaagggacgacgccgcacccacctcgcctccggtnangcggacgaaaac 112
Query: 889 ctccaccacctgcgacgggtcgagcttgggcggcatggc 927
||||||||||||| |||||||||||| |||||||||||
Sbjct: 111 atccaccacctgcgtcgggtcgagcttcggcggcatggc 73
>gb|C73971.1|C73971 C73971 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30051_1A, mRNA sequence
Length = 299
Score = 315 bits (159), Expect = 3e-083
Identities = 215/235 (91%)
Strand = Plus / Minus
Query: 693 cggaggggacgacggagaccttggcctgccggttctggacggtgagcttgacggtgacgc 752
|||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 299 cggaggggacgacggacaccttcncctgacggttctggacggtgagcttgacggtgacgc 240
Query: 753 ggaggcccttccagtccttggccgtctccttggcgatgtcctctccgatcttcttggggg 812
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 239 ggaggcccttccagtccttggccgtctccttggcgatgtcctcaccgatcttcttggggg 180
Query: 813 aaagaccgagcgggccgatcttgggggccagcgaagacgctgcgccgacctcgccgccgg 872
| |||||||| ||||||||||||||||| || || ||| | ||||| ||||| || ||||
Sbjct: 179 agagaccgagagggccgatcttgggggcaagggacgacnccgcgcccacctcncctccgg 120
Query: 873 tcacacggacgaacacctccaccacctgcgacgggtcgagcttgggcggcatggc 927
|||| ||||||||||| ||||||||||||| |||||||||||| | |||||||||
Sbjct: 119 tcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcgncggcatggc 65
>gb|CF293874.1|CF293874 30DGS--03-D08.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-D08, mRNA sequence
Length = 448
Score = 297 bits (150), Expect = 6e-078
Identities = 223/246 (90%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 203 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 262
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcctt-gacggtgc 542
||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||| |
Sbjct: 263 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctcctttgacggtcc 322
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgt 602
|||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 323 cggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgt 382
Query: 603 cgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggct 662
||||||||||||| || |||||||||||||||||||||||||| | ||||| ||| ||||
Sbjct: 383 cgaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggct 442
Query: 663 ccttga 668
||||||
Sbjct: 443 ccttga 448
>gb|CV727142.1|CV727142 14Salt--05-C09.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--05-C09, mRNA sequence
Length = 486
Score = 297 bits (150), Expect = 6e-078
Identities = 204/222 (91%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 260 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 319
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||
Sbjct: 320 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtccc 379
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 380 ggccatctccttggccatggacctgttcctcatgatcctggcgatctcgatgacgtcgtc 439
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttctt 645
|||||||||||| || ||||||||||||||||||||||||||
Sbjct: 440 gaggctgatgttaccactgtgcttgatgttcttgaccttctt 481
>gb|D22680.1|D22680 RICC0892A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0892_1A, mRNA sequence
Length = 297
Score = 293 bits (148), Expect = 9e-077
Identities = 209/230 (90%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 701 acgacggagaccttggcctgcc-ggttctggacggtgagcttgacggtgacgcggaggcc 759
|||||| |||||||| ||| || ||||||| ||||||||||| ||||||||||| || ||
Sbjct: 296 acgacgnagaccttgncctncccggttctgnacggtgagcttcacggtgacgcgnagacc 237
Query: 760 cttccagtccttggccgtctccttggcgatgtcctctccgatcttcttgggggaaagacc 819
||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 236 cttccagtccttggcggtctccttggcgatgtcctctccgatcttcttnggggagagacc 177
Query: 820 gagcgggccgatcttgggggccagcgaagacgctgcgccgacctcgccgccggtcacacg 879
|||||| |||||||||||||| ||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 176 gagcggcccgatcttgggggcgagcgacgacgccgcgccgacctcaccgccggtcacgcg 117
Query: 880 gacgaacacctccaccacctgcgacgggtcgagcttgggcggcatggctg 929
||||||||| ||||||||||| | |||||||||||| |||||||||||||
Sbjct: 116 gacgaacacatccaccacctgggtcgggtcgagcttcggcggcatggctg 67
>gb|C98657.1|C98657 C98657 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0916_2A, mRNA sequence
Length = 456
Score = 287 bits (145), Expect = 6e-075
Identities = 226/254 (88%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 414 ccaatccttcttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
|||| ||| ||||||| || |||||||| |||||||||||| ||||||||||||||||
Sbjct: 268 ccaaacctgcttaagctgaggggatctcgacctcgccgtcggagatctcctgctgcaggt 209
Query: 474 ccttggggtccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctcct 533
||||||||||||||||||| |||||||| |||| | ||| |||||| |||||||||||||
Sbjct: 208 ccttggggtccttgccgtccacggtgcagccgaag-tgaagcaggtgccgaggatctcct 150
Query: 534 tgacggtgccggccaattccttggccatggacctgtgcctcatggtcctggcgatctcga 593
||||||||||||||| |||||||||||||||||| |||||||| ||| | ||||||||
Sbjct: 149 tgacggtgccggccatctccttggccatggacctgggcctcatganccttgngatctcga 90
Query: 594 tgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccc 653
|||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||
Sbjct: 89 tgacgtcgtcgaggntgatgttgccgctgtgcttgatgttcttnaccntcttgcggtncc 30
Query: 654 tctctggctccttg 667
| | |||||||||
Sbjct: 29 tttngggctccttg 16
>gb|CV726075.1|CV726075 14Salt--03-I09.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-I09, mRNA sequence
Length = 465
Score = 287 bits (145), Expect = 6e-075
Identities = 217/241 (90%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 225 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 284
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |
Sbjct: 285 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcct 344
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| | ||||| |||||||||||||||||||||||||
Sbjct: 345 ggccatctccttggccatggacctgttcatcatgatcctggcgatctcgatgacgtcgtc 404
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 405 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 464
Query: 664 c 664
|
Sbjct: 465 c 465
>gb|CV726114.1|CV726114 14Salt--03-J09.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-J09, mRNA sequence
Length = 464
Score = 285 bits (144), Expect = 2e-074
Identities = 216/240 (90%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || |||||||| |||||||| ||| |||||||||||||| |||||||||||
Sbjct: 225 ttaagccgaagggatctcgacctcgccatcggagatctcctgctgcagatccttggggtc 284
Query: 484 cttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggatctccttgacggtgcc 543
||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |
Sbjct: 285 cttgccgtcgacggtgcacccaacgctgacgcaggtcccaaggatctccttgacggtcct 344
Query: 544 ggccaattccttggccatggacctgtgcctcatggtcctggcgatctcgatgacgtcgtc 603
||||| ||||||||||||||||||| | ||||| |||||||||||||||||||||||||
Sbjct: 345 ggccatctccttggccatggacctgttcatcatgatcctggcgatctcgatgacgtcgtc 404
Query: 604 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttgcggtccctctctggctc 663
|||||||||||| || |||||||||||||||||||||||||| | ||||| ||| |||||
Sbjct: 405 gaggctgatgttaccactgtgcttgatgttcttgaccttcttcctgtcccgctcgggctc 464
>gb|AQ331053.1|AQ331053 nbxb0048L05r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0048L05r, DNA sequence
Length = 680
Score = 266 bits (134), Expect = 2e-068
Identities = 176/190 (92%)
Strand = Plus / Minus
Query: 738 gcttgacggtgacgcggaggcccttccagtccttggccgtctccttggcgatgtcctctc 797
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 393 gcttgacggtgacgcggaggcccttccagtccatggccgtctccttggcgatgtcctcac 334
Query: 798 cgatcttcttgggggaaagaccgagcgggccgatcttgggggccagcgaagacgctgcgc 857
|||||||||||||||| |||||||| ||||||||||||||||| || || ||||| ||||
Sbjct: 333 cgatcttcttgggggagagaccgagagggccgatcttgggggcaagggacgacgccgcgc 274
Query: 858 cgacctcgccgccggtcacacggacgaacacctccaccacctgcgacgggtcgagcttgg 917
| |||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||| |
Sbjct: 273 ccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcg 214
Query: 918 gcggcatggc 927
||||||||||
Sbjct: 213 gcggcatggc 204
>gb|D15345.2|D15345 RICC0491A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0491A, mRNA sequence
Length = 267
Score = 232 bits (117), Expect = 3e-058
Identities = 175/195 (89%), Gaps = 1/195 (0%)
Strand = Plus / Minus
Query: 734 gtgagcttgacggtgacgcggaggccctt-ccagtccttggccgtctccttggcgatgtc 792
|||||||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 267 gtgagcttnacggtnacncgnaggcccttnccagtccttggccgtctccttggcgatgtc 208
Query: 793 ctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccagcgaagacgc 852
||| |||||||||||| || | |||||||| ||||||||||||||||| || || |||||
Sbjct: 207 ctcaccgatcttcttgnggnagagaccgagagggccgatcttgggggcaagggacgacgc 148
Query: 853 tgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcgacgggtcgag 912
||||| |||||||| |||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 147 cgcgcccacctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgag 88
Query: 913 cttgggcggcatggc 927
||| |||||||||||
Sbjct: 87 cttcggcggcatggc 73
>gb|D39887.1|D39887 RICS1534A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 242
Score = 155 bits (78), Expect = 5e-035
Identities = 125/142 (88%)
Strand = Plus / Minus
Query: 788 atgtcctctccgatcttcttgggggaaagaccgagcgggccgatcttgggggccagcgaa 847
||||||||||| |||||||| ||| ||||||| ||||| |||||||||||| | | |||
Sbjct: 242 atgtcctctccnatcttcttcgggaaaagaccnagcggcccgatcttggggccgancgac 183
Query: 848 gacgctgcgccgacctcgccgccggtcacacggacgaacacctccaccacctgcgacggg 907
||||| ||||||||||| ||||||||||| |||||||| || ||||||||||| | ||||
Sbjct: 182 gacgccgcgccgacctcaccgccggtcacgcggacgaanacatccaccacctgggtcggg 123
Query: 908 tcgagcttgggcggcatggctg 929
|||||||| |||||||||||||
Sbjct: 122 tcgagcttcggcggcatggctg 101
>gb|AQ365974.2|AQ365974 nbxb0064J04f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0064J04f, DNA sequence
Length = 324
Score = 139 bits (70), Expect = 3e-030
Identities = 106/118 (89%)
Strand = Plus / Minus
Query: 810 gggaaagaccgagcgggccgatcttgggggccagcgaagacgctgcgccgacctcgccgc 869
|||| |||||||| ||||||||||||||||| || || ||||| ||||| |||||||| |
Sbjct: 323 gggagagaccgagagggccgatcttgggggcaagggacgacgccgcgcccacctcgcctc 264
Query: 870 cggtcacacggacgaacacctccaccacctgcgacgggtcgagcttgggcggcatggc 927
||||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct: 263 cggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcggcggcatggc 206
>gb|AQ796940.1|AQ796940 nbxb0071D13f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0071D13f, DNA sequence
Length = 709
Score = 109 bits (55), Expect = 3e-021
Identities = 136/162 (83%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggtccttggggtc 483
|||||| || ||||||| |||||||| ||| ||||||||||||| ||||||||||
Sbjct: 523 ttaagccgaagggatcttgacctcgccatcggagatctcctgctgcaaatccttggggtn 582
Query: 484 cttgccgtcgacggtgca-cccgacgctgacgcaggtaccgaggatctccttgacggtgc 542
|||||||||||||||||| ||| ||||| ||||||| || | |||||||||||| || |
Sbjct: 583 cttgccgtcgacggtgcaccccaacgcttgcgcaggtccccaagatctccttgaccgtcc 642
Query: 543 cggccaattccttggccatggacctgtgcctcatggtcctgg 584
||| || ||||||| ||||||||||| ||||||| ||||||
Sbjct: 643 cgggcatctccttgggcatggacctgttcctcatgatcctgg 684
>gb|CF297965.1|CF297965 7LEAF--01-C13.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--01-C13, mRNA sequence
Length = 117
Score = 95.6 bits (48), Expect = 4e-017
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 860 acctcgccgccggtcacacggacgaacacctccaccacctgcgacgggtcgagcttgggc 919
|||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||| |||
Sbjct: 114 acctcgcctccggtcacgcggacgaacacatccaccacctgcgtcgggtcgagcttcggc 55
Query: 920 ggcatggc 927
||||||||
Sbjct: 54 ggcatggc 47
>gb|AQ364344.1|AQ364344 nbxb0060J06r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0060J06r, DNA sequence
Length = 740
Score = 52.0 bits (26), Expect = 6e-004
Identities = 88/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 424 ttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt-ccttggggt 482
|||||| || |||||||| |||||||| ||| ||||| ||| ||||| | ||||||||
Sbjct: 523 ttaagccgaagggatctcgacctcgccatcggaaatcttctgttgcagattccttggggc 582
Query: 483 ccttgccgtcgacggtgcacccgacgctgacgcaggtaccgaggat 528
||| |||| ||||||||||||| ||| |||| ||||| || |||||
Sbjct: 583 cct-gccggcgacggtgcacccaacgttgactcaggtcccaaggat 627
>gb|D22679.1|D22679 RICC0892B Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0892_12Z, mRNA sequence
Length = 269
Score = 48.1 bits (24), Expect = 0.009
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 423 cttaagcggacgggatctccacctcgccgtcgtcaatctcctgctgcaggt 473
||||||| || |||||||| |||||| ||||| ||||||||||||||||
Sbjct: 51 cttaagctgaggggatctcgacctcgncgtcggagatctcctgctgcaggt 1
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,735,639
Number of Sequences: 438736
Number of extensions: 1735639
Number of successful extensions: 14964
Number of sequences better than 0.5: 46
Number of HSP's better than 0.5 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14724
Number of HSP's gapped (non-prelim): 226
length of query: 985
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 964
effective length of database: 2,791,206,460
effective search space: 2690723027440
effective search space used: 2690723027440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)