BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716207.2.2
(754 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU085982.1|AU085982 AU085982 Rice root Oryza sativa (jap... 420 e-115
gb|CF340370.1|CF340370 RCL1--07-N05.g1 Regenerated callus l... 420 e-115
dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA... 420 e-115
dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA... 420 e-115
ref|XM_483765.1| Oryza sativa (japonica cultivar-group), mRNA 420 e-115
ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-... 420 e-115
ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-... 420 e-115
gb|AU094960.1|AU094960 AU094960 Rice panicle (between 3cm t... 414 e-113
gb|D38974.1|D38974 RICR0038A Rice root Oryza sativa (japoni... 412 e-112
dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA... 412 e-112
gb|AU094167.1|AU094167 AU094167 Rice panicle at flowering s... 404 e-110
gb|CF323705.1|CF323705 HDN--04-I23.g1 OsHDAC1-overexpressin... 351 3e-094
gb|AU064042.1|AU064042 AU064042 Rice panicle at flowering s... 341 3e-091
gb|AU068820.1|AU068820 AU068820 Rice callus Oryza sativa (j... 327 5e-087
dbj|AK059234.1| Oryza sativa (japonica cultivar-group) cDNA... 327 5e-087
gb|AU062811.1|AU062811 AU062811 Rice callus Oryza sativa (j... 307 5e-081
gb|AU062822.1|AU062822 AU062822 Rice callus Oryza sativa (j... 305 2e-080
gb|AU069688.1|AU069688 AU069688 Rice callus Oryza sativa (j... 299 1e-078
gb|AU094959.2|AU094959 AU094959 Rice panicle (between 3cm t... 287 4e-075
gb|CV731462.1|CV731462 FLO--05-I04.b1 Rice flower lambda ph... 278 4e-072
gb|CV731913.1|CV731913 FLO--06-C15.b1 Rice flower lambda ph... 278 4e-072
gb|CV732474.1|CV732474 FLO--06-P12.b1 Rice flower lambda ph... 278 4e-072
dbj|AK058630.1| Oryza sativa (japonica cultivar-group) cDNA... 278 4e-072
gb|D15113.1|D15113 RICC0083A Rice callus Oryza sativa (japo... 272 3e-070
gb|C26466.1|C26466 C26466 Rice callus cDNA Oryza sativa (ja... 266 2e-068
gb|CV731316.1|CV731316 FLO--05-E20.b1 Rice flower lambda ph... 262 2e-067
gb|D22528.1|D22528 RICC0144A Rice callus Oryza sativa (japo... 260 1e-066
gb|C27739.1|C27739 C27739 Rice callus cDNA Oryza sativa (ja... 258 4e-066
gb|AU092653.1|AU092653 AU092653 Rice callus Oryza sativa (j... 248 4e-063
gb|D22958.1|D22958 RICC1868A Rice callus Oryza sativa (japo... 234 6e-059
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 194 5e-047
dbj|AP005546.3| Oryza sativa (japonica cultivar-group) geno... 194 5e-047
gb|AACV01020564.1| Oryza sativa (japonica cultivar-group) c... 194 5e-047
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 194 5e-047
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 194 5e-047
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 194 5e-047
gb|CV731463.1|CV731463 FLO--05-I04.g1 Rice flower lambda ph... 182 2e-043
gb|CV733158.1|CV733158 FLO--07-P04.g1 Rice flower lambda ph... 178 3e-042
gb|D23608.1|D23608 RICC3084A Rice callus Oryza sativa (japo... 176 1e-041
gb|AACV01018982.1| Oryza sativa (japonica cultivar-group) c... 174 4e-041
dbj|AP005524.3| Oryza sativa (japonica cultivar-group) geno... 174 4e-041
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 174 4e-041
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 174 4e-041
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 174 4e-041
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 174 4e-041
gb|CV731317.1|CV731317 FLO--05-E20.g1 Rice flower lambda ph... 159 3e-036
gb|CV732475.1|CV732475 FLO--06-P12.g1 Rice flower lambda ph... 159 3e-036
gb|AU312176.1|AU312176 AU312176 Oryza sativa anther cDNA Or... 159 3e-036
ref|NT_107139.1| Oryza sativa (japonica cultivar-group) 159 3e-036
gb|AACV01022359.1| Oryza sativa (japonica cultivar-group) c... 159 3e-036
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 159 3e-036
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 159 3e-036
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 159 3e-036
gb|AC112209.4| Oryza sativa (japonica cultivar-group) chrom... 159 3e-036
gb|AC138196.3| Oryza sativa (japonica cultivar-group) chrom... 159 3e-036
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 159 3e-036
gb|CV733157.1|CV733157 FLO--07-P04.b1 Rice flower lambda ph... 115 4e-023
gb|CX728338.1|CX728338 OSJNEf04J12.r OSJNEf Oryza sativa (j... 115 4e-023
gb|CB680192.1|CB680192 OSJNEf04J12.f OSJNEf Oryza sativa (j... 111 6e-022
gb|CF322031.1|CF322031 HD--13-H21.b1 OsHDAC1-overexpressing... 54 1e-004
gb|AU172739.1|AU172739 AU172739 Rice panicle at ripening st... 52 4e-004
gb|D22529.1|D22529 RICC0144B Rice callus Oryza sativa (japo... 46 0.027
emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC O... 42 0.43
emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC O... 42 0.43
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 42 0.43
gb|AACV01025005.1| Oryza sativa (japonica cultivar-group) c... 42 0.43
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.43
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.43
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.43
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.43
>gb|AU085982.1|AU085982 AU085982 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0038, mRNA sequence
Length = 626
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 122
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 123 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 182
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 183 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 242
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 243 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 302
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 303 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 362
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 363 gcagatctacaccagggcaaccaa 386
>gb|CF340370.1|CF340370 RCL1--07-N05.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--07-N05, mRNA sequence
Length = 560
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 138
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 139 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 198
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 199 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 258
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 259 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 318
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 319 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 378
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 379 gcagatctacaccagggcaaccaa 402
>dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B04, full
insert sequence
Length = 620
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 137
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 138 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 197
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 198 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 257
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 258 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 317
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 318 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 377
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 378 gcagatctacaccagggcaaccaa 401
>dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F23, full
insert sequence
Length = 629
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 148
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 149 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 208
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 209 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 268
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 269 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 328
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 329 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 388
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 389 gcagatctacaccagggcaaccaa 412
>ref|XM_483765.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 619
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 138
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 139 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 198
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 199 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 258
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 259 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 318
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 319 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 378
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 379 gcagatctacaccagggcaaccaa 402
>ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA
Length = 619
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 138
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 139 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 198
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 199 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 258
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 259 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 318
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 319 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 378
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 379 gcagatctacaccagggcaaccaa 402
>ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA
Length = 620
Score = 420 bits (212), Expect = e-115
Identities = 296/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 137
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 138 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 197
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 198 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 257
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 258 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 317
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 318 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 377
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 378 gcagatctacaccagggcaaccaa 401
>gb|AU094960.1|AU094960 AU094960 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E41238, mRNA sequence
Length = 625
Score = 414 bits (209), Expect = e-113
Identities = 295/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 64 cgagatggccccgaagaaggacaaggccccgccgccgtcntcgaagccggccaagtccgg 123
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 124 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 183
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 184 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 243
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 244 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 303
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 304 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 363
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 364 gcagatctacaccagggcaaccaa 387
>gb|D38974.1|D38974 RICR0038A Rice root Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 416
Score = 412 bits (208), Expect = e-112
Identities = 295/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 122
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 123 cggtggcaagcagaagaagaagaagtggagcaagggagagcaaaaggagaaggtgaacaa 182
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 183 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 242
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 243 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 302
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 303 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 362
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 363 gcagatctacaccagggcaaccaa 386
>dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154N05, full
insert sequence
Length = 619
Score = 412 bits (208), Expect = e-112
Identities = 295/324 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 138
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 139 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 198
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 199 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 258
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 259 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 318
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||| ||||| |||||||||||
Sbjct: 319 ggccatcaatgatttaatgacacggggcctaatccgcatggtgtcggttcactcaagcca 378
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 379 gcagatctacaccagggcaaccaa 402
>gb|AU094167.1|AU094167 AU094167 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3524, mRNA sequence
Length = 611
Score = 404 bits (204), Expect = e-110
Identities = 295/324 (91%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 51 cgagatggccccgaagaagg-caaggccccgccgccgtcgtcgaagccggccaagtccgg 109
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 110 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 169
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 170 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 229
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| ||| | || ||||||||||| ||||| ||||| ||
Sbjct: 230 gcagatcaccccctccgttctctctgagagactcaggatcaacgggtccctggctcgtag 289
Query: 305 ggccatcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagcca 364
||||||||| || || ||| | || ||||| || || ||||||||||| |||||||||||
Sbjct: 290 ggccatcaatgatttaatgacacggggcctaatccgcatggtctcggttcactcaagcca 349
Query: 365 gcagatctacaccagggcaaccaa 388
||||||||||||||||||||||||
Sbjct: 350 gcagatctacaccagggcaaccaa 373
>gb|CF323705.1|CF323705 HDN--04-I23.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-I23, mRNA sequence
Length = 498
Score = 351 bits (177), Expect = 3e-094
Identities = 261/289 (90%)
Strand = Plus / Plus
Query: 100 cgtcgtcgaagccggccaagtccggtggtggcaagcaaaagaagaagaagtggagcaagg 159
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 11 cgtcgtcgaagccggccaagtccggcggtggcaagcagaagaagaagaagtggagcaagg 70
Query: 160 gaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccaggctacctacgacaagc 219
|||||| |||||||||||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 71 gaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccaggccacctacgacaagc 130
Query: 220 tgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctccgagcgtctga 279
||||||| |||||||||||||||||||| |||||||| ||| | ||||| ||| | || |
Sbjct: 131 tgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctctgagagactca 190
Query: 280 ggatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattc 339
|||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || |
Sbjct: 191 ggatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatcc 250
Query: 340 ggatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 251 gcatggtctcggttcactcaagccagcagatctacaccagggcaaccaa 299
>gb|AU064042.1|AU064042 AU064042 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3524_1A, mRNA sequence
Length = 336
Score = 341 bits (172), Expect = 3e-091
Identities = 229/249 (91%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cganatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 122
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 123 cggtggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 182
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 183 ctcggtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaa 242
Query: 245 gcaaatcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggag 304
||| |||||||| ||| | ||||| || | || ||||||||||| ||||| ||||| ||
Sbjct: 243 gcagatcaccccctccnttctctctnagagactcaggatcaacgggtccctggctcgtag 302
Query: 305 ggccatcaa 313
|||||||||
Sbjct: 303 ggccatcaa 311
>gb|AU068820.1|AU068820 AU068820 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50674_9A, mRNA sequence
Length = 405
Score = 327 bits (165), Expect = 5e-087
Identities = 279/317 (88%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 48 atggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggt 107
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct: 108 ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaactcg 167
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 168 gtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaagcag 227
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || ||||| || || ||||| ||| |||||||
Sbjct: 228 atcaccccctccgtcctctccgagcgcctcaggattaatgggtccctggctaggagggct 287
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
|| ||||| |||||| | || || || ||||||| ||||| || | ||||| |||
Sbjct: 288 atgaaggatctgatggatagggggcttatcaggatggtgtcggttcattgcagccaacag 347
Query: 369 atctacaccagggcaac 385
|| ||||||||||||||
Sbjct: 348 atttacaccagggcaac 364
>dbj|AK059234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E11, full
insert sequence
Length = 510
Score = 327 bits (165), Expect = 5e-087
Identities = 279/317 (88%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 62 atggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggt 121
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct: 122 ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaactcg 181
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 182 gtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaagcag 241
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||||| || ||||| || || ||||| ||| |||||||
Sbjct: 242 atcaccccctccgtcctctccgagcgcctcaggattaatgggtccctggctaggagggct 301
Query: 309 atcaaggacttgatggcgcgtggcctcattcggatggtctcggtccactcaagccagcag 368
|| ||||| |||||| | || || || ||||||| ||||| || | ||||| |||
Sbjct: 302 atgaaggatctgatggatagggggcttatcaggatggtgtcggttcattgcagccaacag 361
Query: 369 atctacaccagggcaac 385
|| ||||||||||||||
Sbjct: 362 atttacaccagggcaac 378
>gb|AU062811.1|AU062811 AU062811 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50560_1A, mRNA sequence
Length = 310
Score = 307 bits (155), Expect = 5e-081
Identities = 217/239 (90%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
|||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct: 47 atggccccgaagaaggacaaggttccgccgccgtcgtccaagcccgccaagtccggcggt 106
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct: 107 ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaactcg 166
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 167 gtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaagcag 226
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggc 307
|||||||| ||| ||||||||||||| || ||||| || || ||||| | | |||||||
Sbjct: 227 atcaccccntccntcctctccgagcgnctcaggattaatgggtccctggntaggagggc 285
>gb|AU062822.1|AU062822 AU062822 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50644_1A, mRNA sequence
Length = 346
Score = 305 bits (154), Expect = 2e-080
Identities = 217/239 (90%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
|||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct: 48 atggccccgaagaaggacaaggnnccgccgccgtcgtccaagcccgccaagtccggcggt 107
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct: 108 ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaactcg 167
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 168 gtgctgttcgaccaggccacctacgacaagctgctctccgaggtgcccaagtacaagcag 227
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggc 307
|||||||| ||| | ||||||||||| || ||||| || || ||||| ||| |||||||
Sbjct: 228 atcaccccctccgtnctctccgagcgcctcaggattaatgggtccctggctaggagggc 286
>gb|AU069688.1|AU069688 AU069688 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2030_21A, mRNA sequence
Length = 249
Score = 299 bits (151), Expect = 1e-078
Identities = 181/192 (94%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 56 cgagatggccccgaagaaggacaaggccccgncgccgtcgtcgaagccggccaagtccgg 115
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 116 cgntggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtgaacaa 175
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaa 244
| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 176 ctcggtgctgttcgaccaggccacctacgacaagctgctctncgaggtgcccaagtacaa 235
Query: 245 gcaaatcacccc 256
||| ||||||||
Sbjct: 236 gcagatcacccc 247
>gb|AU094959.2|AU094959 AU094959 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E41238, mRNA sequence
Length = 268
Score = 287 bits (145), Expect = 4e-075
Identities = 182/193 (94%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 65 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cgagatggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccgg 122
Query: 125 tggtggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaa 184
||||||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||
Sbjct: 123 cggtggcaagcagaagaagaagaagtggagctagggaaagcaaaaggagaaggtgaacaa 182
Query: 185 cgcggtgctgttcgaccaggctacctacgacaagctgctctcggagg-tgcccaagtaca 243
| ||||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||
Sbjct: 183 ctcggtgctgttcgaccaggccaactacgacaagctgctctccgaggttgcccaagtaca 242
Query: 244 agcaaatcacccc 256
|||| ||||||||
Sbjct: 243 agcagatcacccc 255
>gb|CV731462.1|CV731462 FLO--05-I04.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-I04,
mRNA sequence
Length = 353
Score = 278 bits (140), Expect = 4e-072
Identities = 221/248 (89%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 77 atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 136
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 137 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 196
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 197 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 256
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 257 atcaccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 316
Query: 309 atcaagga 316
||||||||
Sbjct: 317 atcaagga 324
>gb|CV731913.1|CV731913 FLO--06-C15.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-C15,
mRNA sequence
Length = 540
Score = 278 bits (140), Expect = 4e-072
Identities = 221/248 (89%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 132 atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 191
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 192 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 251
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 252 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 311
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 312 atcaccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 371
Query: 309 atcaagga 316
||||||||
Sbjct: 372 atcaagga 379
>gb|CV732474.1|CV732474 FLO--06-P12.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-P12,
mRNA sequence
Length = 557
Score = 278 bits (140), Expect = 4e-072
Identities = 221/248 (89%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 144 atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 203
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 204 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 263
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 264 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 323
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 324 atcaccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 383
Query: 309 atcaagga 316
||||||||
Sbjct: 384 atcaagga 391
>dbj|AK058630.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C09, full
insert sequence
Length = 604
Score = 278 bits (140), Expect = 4e-072
Identities = 221/248 (89%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 80 atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 139
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 140 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 199
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 200 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 259
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 260 atcaccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 319
Query: 309 atcaagga 316
||||||||
Sbjct: 320 atcaagga 327
>gb|D15113.1|D15113 RICC0083A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0083A, mRNA sequence
Length = 335
Score = 272 bits (137), Expect = 3e-070
Identities = 220/248 (88%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 20 atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 79
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 80 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 139
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 140 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 199
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||| ||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 200 atcancccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 259
Query: 309 atcaagga 316
||||||||
Sbjct: 260 atcaagga 267
>gb|C26466.1|C26466 C26466 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C12376_1A, mRNA sequence
Length = 377
Score = 266 bits (134), Expect = 2e-068
Identities = 219/248 (88%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 34 atggcgccgaagagggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 93
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 94 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 153
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| || || ||||||||||||||||||||
Sbjct: 154 gtgctgttcgacaaggccacctacgacaagcttctntccgaggtgcccaagtacaagcag 213
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 214 atcaccccctccntcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 273
Query: 309 atcaagga 316
||||||||
Sbjct: 274 atcaagga 281
>gb|CV731316.1|CV731316 FLO--05-E20.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-E20,
mRNA sequence
Length = 490
Score = 262 bits (132), Expect = 2e-067
Identities = 219/248 (88%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 82 atggcgccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 141
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||| || ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 142 ggcattcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 201
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 202 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 261
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
|||||||| ||| ||||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 262 atcaccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggcc 321
Query: 309 atcaagga 316
||||||||
Sbjct: 322 atcaagga 329
>gb|D22528.1|D22528 RICC0144A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0144_2A, mRNA sequence
Length = 409
Score = 260 bits (131), Expect = 1e-066
Identities = 196/218 (89%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 68 atggcgccgaagatggacaaggccccgccgccgtcctcgaagccggccaagtccggcgga 127
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 128 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 187
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 188 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 247
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaa 286
|||||||| ||| |||||| |||| | || ||||||||
Sbjct: 248 atcaccccctccgtcctctncgagaggctcaggatcaa 285
>gb|C27739.1|C27739 C27739 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52740_2A, mRNA sequence
Length = 398
Score = 258 bits (130), Expect = 4e-066
Identities = 209/236 (88%)
Strand = Plus / Plus
Query: 153 agcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccaggctacctac 212
||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||
Sbjct: 1 agcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccaggccacctac 60
Query: 213 gacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctccgag 272
|||||||||||||| |||||||||||||||||||| |||||||| ||| | ||||| |||
Sbjct: 61 gacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccnttctctctgag 120
Query: 273 cgtctgaggatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggc 332
| || ||||||||||| ||||| ||||| ||||||||||| || || || | || |||
Sbjct: 121 agactcaggatcaacgggtccctggctcgtagggccatcaatgatttantgacacggggc 180
Query: 333 ctcattcggatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
|| || || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 ctaatccgcatggtctcggttcactcaagccagcagatctacaccagggcaaccaa 236
>gb|AU092653.1|AU092653 AU092653 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52740, mRNA sequence
Length = 486
Score = 248 bits (125), Expect = 4e-063
Identities = 207/235 (88%)
Strand = Plus / Plus
Query: 154 gcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccaggctacctacg 213
|||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 1 gcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccaggccacctacg 60
Query: 214 acaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctccgagc 273
||||||||||||| |||||||||||||||||||| |||||||| ||| | ||||| ||
Sbjct: 61 acaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctctgana 120
Query: 274 gtctgaggatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcc 333
| || ||||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||
Sbjct: 121 gactcaggatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcc 180
Query: 334 tcattcggatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
| || || ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 181 taatccgcatggtctcggttcactcaagccagcagatntacaccagggcaaccaa 235
>gb|D22958.1|D22958 RICC1868A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1868_1A, mRNA sequence
Length = 361
Score = 234 bits (118), Expect = 6e-059
Identities = 213/247 (86%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| |||||||||||||||||||||| ||||| |||| | ||||||| ||||| ||
Sbjct: 71 atggcgccgaagaaggacaaggccccgcngccgtnctcgaggncggccaantccggcgga 130
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 131 ggcaagcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcg 190
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaa 248
|||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 191 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcag 250
Query: 249 atcaccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggcc 308
||||||| ||| | ||||||||| | || |||||||| || || || ||||| ||||
Sbjct: 251 atcacccnntccgtgctctccgagaggctcaggatcaatgggtcgctcgctcgncaggcc 310
Query: 309 atcaagg 315
|||||||
Sbjct: 311 atcaagg 317
>ref|NT_107078.1| Oryza sativa (japonica cultivar-group)
Length = 747721
Score = 194 bits (98), Expect = 5e-047
Identities = 122/130 (93%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 532117 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 532058
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 532057 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 531998
Query: 265 tctccgagcg 274
||||||||||
Sbjct: 531997 tctccgagcg 531988
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 532283 ggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggtgg 532224
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 532223 caagcagaagaagaag 532208
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1003_C09
Length = 124746
Score = 194 bits (98), Expect = 5e-047
Identities = 122/130 (93%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 37889 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 37830
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 37829 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 37770
Query: 265 tctccgagcg 274
||||||||||
Sbjct: 37769 tctccgagcg 37760
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 38055 ggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggtgg 37996
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 37995 caagcagaagaagaag 37980
>gb|AACV01020564.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020564, whole
genome shotgun sequence
Length = 32136
Score = 194 bits (98), Expect = 5e-047
Identities = 122/130 (93%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 17589 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 17648
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 17649 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 17708
Query: 265 tctccgagcg 274
||||||||||
Sbjct: 17709 tctccgagcg 17718
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 17423 ggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggtgg 17482
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 17483 caagcagaagaagaag 17498
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 194 bits (98), Expect = 5e-047
Identities = 122/130 (93%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 11830785 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 11830726
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 11830725 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 11830666
Query: 265 tctccgagcg 274
||||||||||
Sbjct: 11830665 tctccgagcg 11830656
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 11830951 ggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggtgg 11830892
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 11830891 caagcagaagaagaag 11830876
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 194 bits (98), Expect = 5e-047
Identities = 122/130 (93%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 21304596 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 21304537
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 21304536 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 21304477
Query: 265 tctccgagcg 274
||||||||||
Sbjct: 21304476 tctccgagcg 21304467
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 21304762 ggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggtgg 21304703
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 21304702 caagcagaagaagaag 21304687
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 194 bits (98), Expect = 5e-047
Identities = 122/130 (93%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 22401400 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 22401341
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 22401340 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 22401281
Query: 265 tctccgagcg 274
||||||||||
Sbjct: 22401280 tctccgagcg 22401271
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 22401566 ggccccgaagaaggacaaggccccgccgccgtcgtccaagcccgccaagtccggcggtgg 22401507
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 22401506 caagcagaagaagaag 22401491
>gb|CV731463.1|CV731463 FLO--05-I04.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-I04,
mRNA sequence
Length = 534
Score = 182 bits (92), Expect = 2e-043
Identities = 161/184 (87%)
Strand = Plus / Minus
Query: 133 agcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgc 192
|||| ||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||
Sbjct: 534 agcagaagaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcggtgc 475
Query: 193 tgttcgaccaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatca 252
|||||||| |||| |||||||||||||| ||||| |||||||||||||||||||| ||||
Sbjct: 474 tgttcgacaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcagatca 415
Query: 253 ccccttccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggccatca 312
|||| ||| ||||||||||| | || |||||||| || || || ||||| ||||||||
Sbjct: 414 ccccctccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggccatca 355
Query: 313 agga 316
||||
Sbjct: 354 agga 351
>gb|CV733158.1|CV733158 FLO--07-P04.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-P04,
mRNA sequence
Length = 494
Score = 178 bits (90), Expect = 3e-042
Identities = 156/178 (87%)
Strand = Plus / Minus
Query: 139 agaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcg 198
|||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||
Sbjct: 494 agaagaagaagtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcg 435
Query: 199 accaggctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccctt 258
|| |||| |||||||||||||| ||||| |||||||||||||||||||| |||||||| |
Sbjct: 434 acaaggccacctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccct 375
Query: 259 ccatcctctccgagcgtctgaggatcaacggctcccttgctcggagggccatcaagga 316
|| ||||||||||| | || |||||||| || || || ||||| ||||||||||||
Sbjct: 374 ccgtcctctccgagaggctcaggatcaatgggtcgctcgctcgacaggccatcaagga 317
>gb|D23608.1|D23608 RICC3084A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C3084_1A, mRNA sequence
Length = 258
Score = 176 bits (89), Expect = 1e-041
Identities = 145/165 (87%)
Strand = Plus / Plus
Query: 69 atggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggt 128
||||| |||||||||||||||||||||||| |||| ||||||||| ||||| ||| ||
Sbjct: 94 atggcgccgaagaaggacaaggccccgccgncgtcctcgaagccgnacaagtncggcgga 153
Query: 129 ggcaagcaaaagaagaagaagtggagcaagggaaagctaaaggagaaggtaaacaacgcg 188
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 154 ggcaagcagaagaagaagaagtggagcaaggggaaaaanaaggagaaggtgaacaactcg 213
Query: 189 gtgctgttcgaccaggctacctacgacaagctgctctcggaggtg 233
|||||||||||| |||| |||||||||||||| ||||| ||||||
Sbjct: 214 gtgctgttcgacaaggccacctacgacaagcttctctccgaggtg 258
>gb|AACV01018982.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018982, whole
genome shotgun sequence
Length = 54373
Score = 174 bits (88), Expect = 4e-041
Identities = 106/112 (94%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 7053 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 6994
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccc 256
| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 6993 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcacccc 6942
Score = 135 bits (68), Expect = 4e-029
Identities = 74/76 (97%)
Strand = Plus / Minus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 7213 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggcggtgg 7154
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 7153 caagcagaagaagaag 7138
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 6085 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 6026
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6025 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 5978
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0562A06
Length = 154198
Score = 174 bits (88), Expect = 4e-041
Identities = 106/112 (94%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 43603 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 43662
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccc 256
| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 43663 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcacccc 43714
Score = 135 bits (68), Expect = 4e-029
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 43443 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggcggtgg 43502
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 43503 caagcagaagaagaag 43518
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 44571 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 44630
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 44631 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 44678
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 174 bits (88), Expect = 4e-041
Identities = 106/112 (94%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 27728024 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 27728083
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccc 256
| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 27728084 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcacccc 27728135
Score = 135 bits (68), Expect = 4e-029
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 27727864 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggcggtgg 27727923
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 27727924 caagcagaagaagaag 27727939
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 27728992 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 27729051
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 27729052 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 27729099
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 174 bits (88), Expect = 4e-041
Identities = 106/112 (94%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 19076197 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 19076256
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccc 256
| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 19076257 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcacccc 19076308
Score = 135 bits (68), Expect = 4e-029
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19076037 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggcggtgg 19076096
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 19076097 caagcagaagaagaag 19076112
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 19077165 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 19077224
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 19077225 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 19077272
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 174 bits (88), Expect = 4e-041
Identities = 106/112 (94%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 26678203 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 26678262
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccc 256
| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 26678263 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcacccc 26678314
Score = 135 bits (68), Expect = 4e-029
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 26678043 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggcggtgg 26678102
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 26678103 caagcagaagaagaag 26678118
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 26679171 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 26679230
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 26679231 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 26679278
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 174 bits (88), Expect = 4e-041
Identities = 106/112 (94%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 27966111 agaagtggagcaagggaaagcaaaaggagaaggtgaacaactcggtgctgttcgaccagg 27966170
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcacccc 256
| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 27966171 ccacctacgacaagctgctctccgaggtgcccaagtacaagcagatcacccc 27966222
Score = 135 bits (68), Expect = 4e-029
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 71 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtgg 130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 27965951 ggccccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggcggtgg 27966010
Query: 131 caagcaaaagaagaag 146
|||||| |||||||||
Sbjct: 27966011 caagcagaagaagaag 27966026
Score = 111 bits (56), Expect = 6e-022
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 27967079 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 27967138
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 27967139 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 27967186
>gb|CV731317.1|CV731317 FLO--05-E20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-E20,
mRNA sequence
Length = 481
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Minus
Query: 149 gtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccaggctac 208
|||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||| ||
Sbjct: 481 gtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcgacaaggccac 422
Query: 209 ctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctc 268
|||||||||||| ||||| |||||||||||||||||||| |||||||| ||| |||||||
Sbjct: 421 ctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctc 362
Query: 269 cgagcgtctgaggatcaacggctcccttgctcggagggccatcaagga 316
|||| | || |||||||| || || || ||||| ||||||||||||
Sbjct: 361 cgagaggctcaggatcaatgggtcgctcgctcgacaggccatcaagga 314
>gb|CV732475.1|CV732475 FLO--06-P12.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-P12,
mRNA sequence
Length = 485
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Minus
Query: 149 gtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccaggctac 208
|||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||| ||
Sbjct: 485 gtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcgacaaggccac 426
Query: 209 ctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctc 268
|||||||||||| ||||| |||||||||||||||||||| |||||||| ||| |||||||
Sbjct: 425 ctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctc 366
Query: 269 cgagcgtctgaggatcaacggctcccttgctcggagggccatcaagga 316
|||| | || |||||||| || || || ||||| ||||||||||||
Sbjct: 365 cgagaggctcaggatcaatgggtcgctcgctcgacaggccatcaagga 318
>gb|AU312176.1|AU312176 AU312176 Oryza sativa anther cDNA Oryza sativa (japonica
cultivar-group) cDNA clone JRA1597, mRNA sequence
Length = 390
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Minus
Query: 221 gctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctccgagcgtctgag 280
|||||| |||||||||||||||||||| |||||||| ||| | ||||| ||| | || ||
Sbjct: 378 gctctccgaggtgcccaagtacaagcagatcaccccctccgttctctctgagagactcag 319
Query: 281 gatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgtggcctcattcg 340
||||||||| ||||| ||||| ||||||||||| || || ||| | || ||||| || ||
Sbjct: 318 gatcaacgggtccctggctcgtagggccatcaatgatttaatgacacggggcctaatccg 259
Query: 341 gatggtctcggtccactcaagccagcagatctacaccagggcaaccaa 388
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 258 catggtctcggttcactcaagccagcagatctacaccagggcaaccaa 211
>ref|NT_107139.1| Oryza sativa (japonica cultivar-group)
Length = 380899
Score = 159 bits (80), Expect = 3e-036
Identities = 116/128 (90%)
Strand = Plus / Plus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
|||||||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||
Sbjct: 6434 agaagtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcgacaagg 6493
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||| ||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 6494 ccacctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 6553
Query: 265 tctccgag 272
||||||||
Sbjct: 6554 tctccgag 6561
Score = 111 bits (56), Expect = 6e-022
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 75 ccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtggcaag 134
||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 6257 ccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcggaggcaag 6316
Query: 135 caaaagaagaag 146
|| |||||||||
Sbjct: 6317 cagaagaagaag 6328
>gb|AACV01022359.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022359, whole
genome shotgun sequence
Length = 52987
Score = 159 bits (80), Expect = 3e-036
Identities = 116/128 (90%)
Strand = Plus / Minus
Query: 145 agaagtggagcaagggaaagctaaaggagaaggtaaacaacgcggtgctgttcgaccagg 204
|||||||||||||||| |||| ||||||||||| |||||| |||||||||||||| |||
Sbjct: 41373 agaagtggagcaaggggaagcagaaggagaaggtgaacaactcggtgctgttcgacaagg 41314
Query: 205 ctacctacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcc 264
| |||||||||||||| ||||| |||||||||||||||||||| |||||||| ||| |||
Sbjct: 41313 ccacctacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcc 41254
Query: 265 tctccgag 272
||||||||
Sbjct: 41253 tctccgag 41246
Score = 111 bits (56), Expect = 6e-022
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 75 ccgaagaaggacaaggccccgccgccgtcgtcgaagccggccaagtccggtggtggcaag 134
||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 41550 ccgaagaaggacaaggccccgccgccgtcctcgaagccggccaagtccggcggaggcaag 41491
Query: 135 caaaagaagaag 146
|| |||||||||
Sbjct: 41490 cagaagaagaag 41479
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,462,310
Number of Sequences: 438736
Number of extensions: 1462310
Number of successful extensions: 16403
Number of sequences better than 0.5: 70
Number of HSP's better than 0.5 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15978
Number of HSP's gapped (non-prelim): 423
length of query: 754
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 733
effective length of database: 2,791,206,460
effective search space: 2045954335180
effective search space used: 2045954335180
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)