BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.593
(1027 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK059871.1| Oryza sativa (japonica cultivar-group) cDNA... 442 e-121
dbj|AK099355.1| Oryza sativa (japonica cultivar-group) cDNA... 442 e-121
gb|AACV01005819.1| Oryza sativa (japonica cultivar-group) c... 240 1e-060
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 240 1e-060
gb|AC140005.2| Oryza sativa (japonica cultivar-group) chrom... 240 1e-060
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 240 1e-060
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 240 1e-060
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 240 1e-060
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 240 1e-060
dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group)... 135 5e-029
dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA... 135 5e-029
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 135 5e-029
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 135 5e-029
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 135 5e-029
gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) c... 135 5e-029
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 135 5e-029
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 135 5e-029
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 135 5e-029
gb|AQ287446.1|AQ287446 nbxb0030E24f CUGI Rice BAC Library O... 115 5e-023
gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (j... 115 5e-023
gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (j... 115 5e-023
gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (j... 115 5e-023
gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressin... 115 5e-023
gb|CF324345.1|CF324345 HDN--06-E15.g1 OsHDAC1-overexpressin... 115 5e-023
gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing... 115 5e-023
dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group)... 115 5e-023
dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA... 115 5e-023
dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA... 115 5e-023
dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA... 115 5e-023
dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA... 115 5e-023
gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) c... 115 5e-023
emb|X56063.1|OSENDO O.sativa mRNA for endochitinase 115 5e-023
gb|AU097550.1|AU097550 AU097550 Rice shoot Oryza sativa (ja... 107 1e-020
gb|C27564.1|C27564 C27564 Rice callus cDNA Oryza sativa (ja... 105 5e-020
gb|BP185058.1|BP185058 BP185058 pNS rice panicle cDNA, flow... 103 2e-019
dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-019
gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11... 103 2e-019
gb|AACV01022031.1| Oryza sativa (japonica cultivar-group) c... 103 2e-019
ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chi... 103 2e-019
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 103 2e-019
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 103 2e-019
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 103 2e-019
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 103 2e-019
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 103 2e-019
gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmCh... 101 7e-019
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 98 1e-017
gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 ... 98 1e-017
gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA 98 1e-017
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 98 1e-017
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 98 1e-017
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 96 5e-017
gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) c... 96 5e-017
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 96 5e-017
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 96 5e-017
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 96 5e-017
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 96 5e-017
gb|AACV01022034.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
gb|C98575.1|C98575 C98575 Rice panicle at flowering stage O... 82 7e-013
ref|NM_197598.1| Oryza sativa (japonica cultivar-group) put... 82 7e-013
gb|C72797.1|C72797 C72797 Rice panicle at flowering stage O... 74 2e-010
gb|AU077767.1|AU077767 AU077767 Rice cDNA from young root O... 62 6e-007
gb|CA756422.1|CA756422 BR030042000_PLATE_B01_2_010.ab1 OA O... 58 1e-005
dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group)... 58 1e-005
dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase 58 1e-005
gb|D39758.1|D39758 RICS1345A Rice shoot Oryza sativa (japon... 50 0.002
dbj|AK101475.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK110261.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AC137616.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AACV01010846.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AU077766.1|AU077766 AU077766 Rice cDNA from young root O... 48 0.010
gb|AU090548.1|AU090548 AU090548 Rice panicle at flowering s... 46 0.038
gb|AU097549.2|AU097549 AU097549 Rice shoot Oryza sativa (ja... 46 0.038
gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering s... 44 0.15
gb|AU082112.1|AU082112 AU082112 Rice panicle at flowering s... 44 0.15
gb|CF311469.1|CF311469 ABF--06-L04.g1 ABF3-overexpressing t... 44 0.15
dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia... 44 0.15
dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
ref|XM_473013.1| Oryza sativa (japonica cultivar-group), p... 44 0.15
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 44 0.15
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromoso... 44 0.15
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
>dbj|AK059871.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E11, full
insert sequence
Length = 1086
Score = 442 bits (223), Expect = e-121
Identities = 544/651 (83%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 180 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 239
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 240 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 299
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgact 323
|| ||||||||||| ||||| |||||||| ||||||||||| || ||||||||||| |||
Sbjct: 300 cgcgagctcgccgctttctttggccagacctcccacgaaactacaggtggatgggcaact 359
Query: 324 gctccggatggaccgtttgcctggggatactgccgggtgaaggaacagaaacagacggac 383
||||| |||||||| ||||| |||||||||||||||||||| || | | | |||||
Sbjct: 360 gctcctgatggaccctttgcttggggatactgccgggtgaacgagatcacgccgtcggac 419
Query: 384 ccaccctactatggacgaggacccatacagctaactcataagtacaactacaggctcgcc 443
|| |||||||| || ||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 420 ccgccctactacggccgaggacccatacagcttactcataagtacaactaccagctagcc 479
Query: 444 gggcaagcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtg 503
||| | ||| || ||| |||||||| | |||| ||||||||| | || |||||||||
Sbjct: 480 ggggacgcgttgggtctggacctggtgaacaaccccgacctggtgtcaagcgaccccgtg 539
Query: 504 gtagccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgc 563
|| || |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 540 gtggcgttcaggacggccatctggttctggatgacggcgcagtcacccaagccgtcgtgc 599
Query: 564 cacgccgtgatgaccggcgactggacgccgtccgccaccgaccgcgccgccgggaggctc 623
|||| ||| || ||| | | ||||||||||||| | ||||| | |||||||||||
Sbjct: 600 cacgacgtaatcaccaaccagtggacgccgtccggcgatgaccgtagctccgggaggctc 659
Query: 624 cccggatatggcctcacctcgaacatcatcaacggcgggctagagtgcggcaagggccag 683
||||| || ||| | || | ||||||||||||||||| |||||||||||||||| |
Sbjct: 660 cccggctacggcatggccaccaacatcatcaacggcggtgaagagtgcggcaagggctac 719
Query: 684 tccaccgacggcgccaaggaccgggtcggctactacaagaggtactgcgatatgctccgg 743
||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 720 tccaccgacaacgccaaggaccgggtcggctactacaagaggtactgcgacatgttccgc 779
Query: 744 gtggggtacggggacaacgtgccctgcaaggaccagaagccttacggagga 794
|| || ||||| || ||| | |||||| |||||||||||| |||||||||
Sbjct: 780 gtaggatacggagataacatagcctgcagggaccagaagccctacggagga 830
>dbj|AK099355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P19, full
insert sequence
Length = 1097
Score = 442 bits (223), Expect = e-121
Identities = 544/651 (83%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 177 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 236
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 237 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 296
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgact 323
|| ||||||||||| ||||| |||||||| ||||||||||| || ||||||||||| |||
Sbjct: 297 cgcgagctcgccgctttctttggccagacctcccacgaaactacaggtggatgggcaact 356
Query: 324 gctccggatggaccgtttgcctggggatactgccgggtgaaggaacagaaacagacggac 383
||||| |||||||| ||||| |||||||||||||||||||| || | | | |||||
Sbjct: 357 gctcctgatggaccctttgcttggggatactgccgggtgaacgagatcacgccgtcggac 416
Query: 384 ccaccctactatggacgaggacccatacagctaactcataagtacaactacaggctcgcc 443
|| |||||||| || ||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 417 ccgccctactacggccgaggacccatacagcttactcataagtacaactaccagctagcc 476
Query: 444 gggcaagcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtg 503
||| | ||| || ||| |||||||| | |||| ||||||||| | || |||||||||
Sbjct: 477 ggggacgcgttgggtctggacctggtgaacaaccccgacctggtgtcaagcgaccccgtg 536
Query: 504 gtagccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgc 563
|| || |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 537 gtggcgttcaggacggccatctggttctggatgacggcgcagtcacccaagccgtcgtgc 596
Query: 564 cacgccgtgatgaccggcgactggacgccgtccgccaccgaccgcgccgccgggaggctc 623
|||| ||| || ||| | | ||||||||||||| | ||||| | |||||||||||
Sbjct: 597 cacgacgtaatcaccaaccagtggacgccgtccggcgatgaccgtagctccgggaggctc 656
Query: 624 cccggatatggcctcacctcgaacatcatcaacggcgggctagagtgcggcaagggccag 683
||||| || ||| | || | ||||||||||||||||| |||||||||||||||| |
Sbjct: 657 cccggctacggcatggccaccaacatcatcaacggcggtgaagagtgcggcaagggctac 716
Query: 684 tccaccgacggcgccaaggaccgggtcggctactacaagaggtactgcgatatgctccgg 743
||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 717 tccaccgacaacgccaaggaccgggtcggctactacaagaggtactgcgacatgttccgc 776
Query: 744 gtggggtacggggacaacgtgccctgcaaggaccagaagccttacggagga 794
|| || ||||| || ||| | |||||| |||||||||||| |||||||||
Sbjct: 777 gtaggatacggagataacatagcctgcagggaccagaagccctacggagga 827
>gb|AACV01005819.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005819, whole
genome shotgun sequence
Length = 10245
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Minus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 8318 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 8259
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 8258 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 8199
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 8198 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 8139
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 8138 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 8079
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 8078 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 8019
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 8018 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 7959
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 7958 gccctacggagga 7946
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 8854 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 8795
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 8794 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 8735
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 8734 cgcgagctcgccgctttctttggccagacctcccacgaaac 8694
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 8587 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 8528
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 8527 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 8475
>ref|NT_079917.2| Oryza sativa (japonica cultivar-group)
Length = 2507935
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Plus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 254058 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 254117
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 254118 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 254177
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 254178 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 254237
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 254238 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 254297
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 254298 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 254357
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 254358 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 254417
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 254418 gccctacggagga 254430
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 253522 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 253581
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 253582 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 253641
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 253642 cgcgagctcgccgctttctttggccagacctcccacgaaac 253682
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 253789 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 253848
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 253849 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 253901
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
complete sequence
Length = 138054
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Plus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 66457 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 66516
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 66517 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 66576
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 66577 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 66636
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 66637 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 66696
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 66697 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 66756
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 66757 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 66816
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 66817 gccctacggagga 66829
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 65921 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 65980
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 65981 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 66040
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 66041 cgcgagctcgccgctttctttggccagacctcccacgaaac 66081
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 66188 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 66247
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 66248 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 66300
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Plus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 1869263 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 1869322
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 1869323 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 1869382
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 1869383 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 1869442
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 1869443 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 1869502
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 1869503 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 1869562
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 1869563 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 1869622
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 1869623 gccctacggagga 1869635
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 1868727 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 1868786
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 1868787 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 1868846
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1868847 cgcgagctcgccgctttctttggccagacctcccacgaaac 1868887
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 1868994 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 1869053
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 1869054 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 1869106
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Plus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 2061625 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 2061684
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 2061685 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 2061744
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 2061745 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 2061804
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 2061805 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 2061864
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 2061865 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 2061924
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 2061925 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 2061984
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 2061985 gccctacggagga 2061997
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 2061089 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 2061148
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 2061149 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 2061208
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 2061209 cgcgagctcgccgctttctttggccagacctcccacgaaac 2061249
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17937046 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 17937098
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 2061356 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 2061415
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 2061416 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 2061468
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 17937175 aacatcatcaacggcgggctggagtgcggc 17937204
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 17936659 cttctacacctacgacgccttcgtcgccgccgccagc 17936695
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Plus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 1841593 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 1841652
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 1841653 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 1841712
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 1841713 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 1841772
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 1841773 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 1841832
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 1841833 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 1841892
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 1841893 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 1841952
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 1841953 gccctacggagga 1841965
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 1841057 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 1841116
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 1841117 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 1841176
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1841177 cgcgagctcgccgctttctttggccagacctcccacgaaac 1841217
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17197378 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 17197430
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 1841324 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 1841383
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 1841384 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 1841436
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 17197507 aacatcatcaacggcgggctggagtgcggc 17197536
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 17196993 cttctacacctacgacgccttcgtcgccgccgccagc 17197029
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 288 cagacgtcccacgaaaccaccggtggatgggcgac 322
|||||||||||||| |||||||| || ||||||||
Sbjct: 17197102 cagacgtcccacgagaccaccggcgggtgggcgac 17197136
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 240 bits (121), Expect = 1e-060
Identities = 310/373 (83%)
Strand = Plus / Plus
Query: 422 taagtacaactacaggctcgccgggcaagcgctgaacctgaacctggtgggcgacccgga 481
||||||||||||| ||| |||||| | ||| || ||| |||||||| | |||| ||
Sbjct: 1841595 taagtacaactaccagctagccggggacgcgttgggtctggacctggtgaacaaccccga 1841654
Query: 482 cctggtggcgagagaccccgtggtagccttcaagacggccatctggttctggatgacgcc 541
||||||| | || ||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct: 1841655 cctggtgtcaagcgaccccgtggtggcgttcaggacggccatctggttctggatgacggc 1841714
Query: 542 gcagtcgcccaagccgtcgtgccacgccgtgatgaccggcgactggacgccgtccgccac 601
|||||| ||||||||||||||||||| ||| || ||| | | ||||||||||||| |
Sbjct: 1841715 gcagtcacccaagccgtcgtgccacgacgtaatcaccaaccagtggacgccgtccggcga 1841774
Query: 602 cgaccgcgccgccgggaggctccccggatatggcctcacctcgaacatcatcaacggcgg 661
||||| | |||||||||||||||| || ||| | || | |||||||||||||||||
Sbjct: 1841775 tgaccgtagctccgggaggctccccggctacggcatggccaccaacatcatcaacggcgg 1841834
Query: 662 gctagagtgcggcaagggccagtccaccgacggcgccaaggaccgggtcggctactacaa 721
|||||||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct: 1841835 tgaagagtgcggcaagggctactccaccgacaacgccaaggaccgggtcggctactacaa 1841894
Query: 722 gaggtactgcgatatgctccgggtggggtacggggacaacgtgccctgcaaggaccagaa 781
|||||||||||| ||| |||| || || ||||| || ||| | |||||| |||||||||
Sbjct: 1841895 gaggtactgcgacatgttccgcgtaggatacggagataacatagcctgcagggaccagaa 1841954
Query: 782 gccttacggagga 794
||| |||||||||
Sbjct: 1841955 gccctacggagga 1841967
Score = 121 bits (61), Expect = 8e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 144 atgctgagccaccgcggcgacagcgggtgccagggcgccttctacacctacgacgccttc 203
|||||||||||||| || ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 1841059 atgctgagccaccgtggggaccaaggttgccagggcgccttctacacctacgacgcgttc 1841118
Query: 204 atcgaggccgccagcaagttccccggcttcggcaccaccggcgacgagcagacgcgcagg 263
||| |||||||| | | ||||| | |||||||| |||||| |||| | |||||| ||
Sbjct: 1841119 atcaaggccgccggagatttccctagattcggcacgaccggcaacgacgaaacgcgccgg 1841178
Query: 264 cgggagctcgccgccttcttcggccagacgtcccacgaaac 304
|| ||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1841179 cgcgagctcgccgctttctttggccagacctcccacgaaac 1841219
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17203809 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 17203861
Score = 89.7 bits (45), Expect = 3e-015
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 309 ggtggatgggcgactgctccggatggaccgtttgcctggggatactgccgggtgaaggaa 368
||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 1841326 ggtggatgggcaactgctcctgatggaccctttgcttggggatactgccgggtgaacgag 1841385
Query: 369 cagaaacagacggacccaccctactatggacgaggacccatacagctaactca 421
| | | ||||||| |||||||| || ||||||||||||||||| |||||
Sbjct: 1841386 atcacgccgtcggacccgccctactacggccgaggacccatacagcttactca 1841438
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 17203938 aacatcatcaacggcgggctggagtgcggc 17203967
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 17203424 cttctacacctacgacgccttcgtcgccgccgccagc 17203460
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 288 cagacgtcccacgaaaccaccggtggatgggcgac 322
|||||||||||||| |||||||| || ||||||||
Sbjct: 17203533 cagacgtcccacgagaccaccggcgggtgggcgac 17203567
>dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group) Cht-3 gene for endochitinase,
complete cds
Length = 2808
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2506 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 2565
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 2566 cggtgatcaccggccagtggacgccgtccgcc 2597
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 2135 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 2194
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 2195 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 2254
Query: 302 aaccaccgg 310
||||||||
Sbjct: 2255 gaccaccgg 2263
>dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F06, full
insert sequence
Length = 1169
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 810
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 811 cggtgatcaccggccagtggacgccgtccgcc 842
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 380 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 439
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 440 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 499
Query: 302 aaccaccgg 310
||||||||
Sbjct: 500 gaccaccgg 508
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9425 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 9484
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 9485 cggtgatcaccggccagtggacgccgtccgcc 9516
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13034 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 13093
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 13094 cggtgatgac 13103
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 9054 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 9113
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 9114 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 9173
Query: 302 aaccaccgg 310
||||||||
Sbjct: 9174 gaccaccgg 9182
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 12660 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 12719
Query: 242 cggcgacg 249
||||||||
Sbjct: 12720 cggcgacg 12727
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0548E04
Length = 138037
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118659 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 118718
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 118719 cggtgatcaccggccagtggacgccgtccgcc 118750
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122268 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 122327
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 122328 cggtgatgac 122337
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 118288 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 118347
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 118348 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 118407
Query: 302 aaccaccgg 310
||||||||
Sbjct: 118408 gaccaccgg 118416
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 121894 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 121953
Query: 242 cggcgacg 249
||||||||
Sbjct: 121954 cggcgacg 121961
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9425 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 9484
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 9485 cggtgatcaccggccagtggacgccgtccgcc 9516
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13034 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 13093
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 13094 cggtgatgac 13103
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 9054 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 9113
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 9114 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 9173
Query: 302 aaccaccgg 310
||||||||
Sbjct: 9174 gaccaccgg 9182
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 12660 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 12719
Query: 242 cggcgacg 249
||||||||
Sbjct: 12720 cggcgacg 12727
>gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014964, whole
genome shotgun sequence
Length = 4179
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 1248
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 1247 cggtgatcaccggccagtggacgccgtccgcc 1216
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Minus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 1678 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 1619
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 1618 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 1559
Query: 302 aaccaccgg 310
||||||||
Sbjct: 1558 gaccaccgg 1550
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11703053 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 11703112
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 11703113 cggtgatcaccggccagtggacgccgtccgcc 11703144
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11707504 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 11707563
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 11707564 cggtgatgac 11707573
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 11702682 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 11702741
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 11702742 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 11702801
Query: 302 aaccaccgg 310
||||||||
Sbjct: 11702802 gaccaccgg 11702810
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 11707130 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 11707189
Query: 242 cggcgacg 249
||||||||
Sbjct: 11707190 cggcgacg 11707197
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29401790 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 29401849
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 29401850 cggtgatcaccggccagtggacgccgtccgcc 29401881
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29406241 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 29406300
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 29406301 cggtgatgac 29406310
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 29401419 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 29401478
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 29401479 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 29401538
Query: 302 aaccaccgg 310
||||||||
Sbjct: 29401539 gaccaccgg 29401547
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 29405867 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 29405926
Query: 242 cggcgacg 249
||||||||
Sbjct: 29405927 cggcgacg 29405934
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 135 bits (68), Expect = 5e-029
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30372064 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 30372123
Query: 568 ccgtgatgaccggcgactggacgccgtccgcc 599
| ||||| |||||| | |||||||||||||||
Sbjct: 30372124 cggtgatcaccggccagtggacgccgtccgcc 30372155
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30375673 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 30375732
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 30375733 cggtgatgac 30375742
Score = 58.0 bits (29), Expect = 1e-005
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | | ||| | ||||| ||||||
Sbjct: 30371693 cttctacacctacgacgccttcgtcgccgccgccaacgcctacccggacttcgccaccac 30371752
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| | || ||| ||| ||| ||||||||||| | | ||||||||||||||
Sbjct: 30371753 cggcgacgccgacacctgcaagcgcgaggtcgccgccttcctggcgcagacgtcccacga 30371812
Query: 302 aaccaccgg 310
||||||||
Sbjct: 30371813 gaccaccgg 30371821
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 30375299 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 30375358
Query: 242 cggcgacg 249
||||||||
Sbjct: 30375359 cggcgacg 30375366
>gb|AQ287446.1|AQ287446 nbxb0030E24f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0030E24f, DNA sequence
Length = 740
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 243
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 242 cggtgatgac 233
>gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07C10 3', mRNA sequence
Length = 770
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 325
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 324 cggtgatgac 315
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 758 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 699
Query: 242 cggcgacg 249
||||||||
Sbjct: 698 cggcgacg 691
>gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14I06 5', mRNA sequence
Length = 839
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 436
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 437 cggtgatgac 446
>gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14I06 3', mRNA sequence
Length = 756
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 412
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 411 cggtgatgac 402
>gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-N11, mRNA sequence
Length = 593
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 194
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 195 cggtgatgac 204
>gb|CF324345.1|CF324345 HDN--06-E15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--06-E15, mRNA sequence
Length = 507
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 85
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 86 cggtgatgac 95
>gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-N01, mRNA sequence
Length = 271
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 167
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 168 cggtgatgac 177
>dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group) Cht-1 gene for endochitinase,
complete cds
Length = 2739
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2003 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 2062
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 2063 cggtgatgac 2072
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 1629 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 1688
Query: 242 cggcgacg 249
||||||||
Sbjct: 1689 cggcgacg 1696
>dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D05, full
insert sequence
Length = 1217
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 800
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 801 cggtgatgac 810
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 367 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 426
Query: 242 cggcgacg 249
||||||||
Sbjct: 427 cggcgacg 434
>dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I21, full
insert sequence
Length = 1174
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 778
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 779 cggtgatgac 788
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 345 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 404
Query: 242 cggcgacg 249
||||||||
Sbjct: 405 cggcgacg 412
>dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C04, full
insert sequence
Length = 1136
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 797
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 798 cggtgatgac 807
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 364 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 423
Query: 242 cggcgacg 249
||||||||
Sbjct: 424 cggcgacg 431
>dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A08, full
insert sequence
Length = 1141
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 802
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 803 cggtgatgac 812
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 369 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 428
Query: 242 cggcgacg 249
||||||||
Sbjct: 429 cggcgacg 436
>gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014965, whole
genome shotgun sequence
Length = 41039
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3095 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 3154
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 3155 cggtgatgac 3164
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 2721 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 2780
Query: 242 cggcgacg 249
||||||||
Sbjct: 2781 cggcgacg 2788
>emb|X56063.1|OSENDO O.sativa mRNA for endochitinase
Length = 1160
Score = 115 bits (58), Expect = 5e-023
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ccttcaagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 697
Query: 568 ccgtgatgac 577
| ||||||||
Sbjct: 698 cggtgatgac 707
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 264 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 323
Query: 242 cggcgacg 249
||||||||
Sbjct: 324 cggcgacg 331
>gb|AU097550.1|AU097550 AU097550 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6163, mRNA sequence
Length = 535
Score = 107 bits (54), Expect = 1e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 509 cttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 80 cttcaagacggcgttctggttctggatgacnccgcagtcgcccaagccgtcgtgccacgc 139
Query: 569 cgtgatgac 577
||||||||
Sbjct: 140 ggtgatgac 148
>gb|C27564.1|C27564 C27564 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52229_3A, mRNA sequence
Length = 461
Score = 105 bits (53), Expect = 5e-020
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 aagacggcgttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgcggtg 60
Query: 573 atgac 577
|||||
Sbjct: 61 atgac 65
>gb|BP185058.1|BP185058 BP185058 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 12YPR007, mRNA
sequence
Length = 943
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 470 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 529
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 530 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 589
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 590 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 649
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 650 ccaacatcatcaacggcggcatcgagtgcggc 681
Score = 89.7 bits (45), Expect = 3e-015
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggtgga 314
||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 269 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggtgga 321
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 186 cttctacacgtacgacgccttcatcgccgccgcca 220
>dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042L15, full
insert sequence
Length = 1073
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 481 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 540
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 541 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 600
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 601 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 660
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 661 ccaacatcatcaacggcggcatcgagtgcggc 692
Score = 89.7 bits (45), Expect = 3e-015
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggtgga 314
||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 280 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggtgga 332
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 197 cttctacacgtacgacgccttcatcgccgccgcca 231
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
sequence
Length = 138824
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 89296 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 89355
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 89356 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 89415
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 89416 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 89475
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 89476 ccaacatcatcaacggcggcatcgagtgcggc 89507
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 102128 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 102177
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 88255 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 88304
Score = 67.9 bits (34), Expect = 1e-008
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 450 gcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtggtagcc 509
|||||| | ||| ||||||| ||||||||| |||||||| | | || ||||||| ||
Sbjct: 104010 gcgctggagctggacctggtaggcgacccg-acctggtgtccaccaacgccgtggtctcc 104068
Query: 510 ttcaagacggccatctggttctggatgacg 539
||||||||||||||||||||||||||||||
Sbjct: 104069 ttcaagacggccatctggttctggatgacg 104098
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 102045 cttctacacgtacgacgccttcatcgccgccgcca 102079
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 88172 cttctacacgtacgacgccttcatcgccgccgcca 88206
>gb|AACV01022031.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022031, whole
genome shotgun sequence
Length = 24222
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 16000 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 16059
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 16060 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 16119
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 16120 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 16179
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 16180 ccaacatcatcaacggcggcatcgagtgcggc 16211
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 14959 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 15008
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 14876 cttctacacgtacgacgccttcatcgccgccgcca 14910
>ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chitinase
(OSJNBb0015I11.14), mRNA
Length = 924
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 455 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 514
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 515 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 574
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 575 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 634
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 635 ccaacatcatcaacggcggcatcgagtgcggc 666
Score = 89.7 bits (45), Expect = 3e-015
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggtgga 314
||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 254 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggtgga 306
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 171 cttctacacgtacgacgccttcatcgccgccgcca 205
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 2610038 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 2610097
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 2610098 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 2610157
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 2610158 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 2610217
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 2610218 ccaacatcatcaacggcggcatcgagtgcggc 2610249
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2622870 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 2622919
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2608997 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 2609046
Score = 67.9 bits (34), Expect = 1e-008
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 450 gcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtggtagcc 509
|||||| | ||| ||||||| ||||||||| |||||||| | | || ||||||| ||
Sbjct: 2624752 gcgctggagctggacctggtaggcgacccg-acctggtgtccaccaacgccgtggtctcc 2624810
Query: 510 ttcaagacggccatctggttctggatgacg 539
||||||||||||||||||||||||||||||
Sbjct: 2624811 ttcaagacggccatctggttctggatgacg 2624840
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 2622787 cttctacacgtacgacgccttcatcgccgccgcca 2622821
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 2608914 cttctacacgtacgacgccttcatcgccgccgcca 2608948
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 8658489 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 8658548
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 8658549 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 8658608
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 8658609 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 8658668
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 8658669 ccaacatcatcaacggcggcatcgagtgcggc 8658700
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 8674342 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 8674391
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 8657448 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 8657497
Score = 67.9 bits (34), Expect = 1e-008
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 450 gcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtggtagcc 509
|||||| | ||| ||||||| ||||||||| |||||||| | | || ||||||| ||
Sbjct: 8676224 gcgctggagctggacctggtaggcgacccg-acctggtgtccaccaacgccgtggtctcc 8676282
Query: 510 ttcaagacggccatctggttctggatgacg 539
||||||||||||||||||||||||||||||
Sbjct: 8676283 ttcaagacggccatctggttctggatgacg 8676312
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 8674259 cttctacacgtacgacgccttcatcgccgccgcca 8674293
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 8657365 cttctacacgtacgacgccttcatcgccgccgcca 8657399
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 19524283 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 19524342
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 19524343 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 19524402
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 19524403 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 19524462
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 19524463 ccaacatcatcaacggcggcatcgagtgcggc 19524494
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 19540136 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 19540185
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 19523242 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 19523291
Score = 67.9 bits (34), Expect = 1e-008
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 450 gcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtggtagcc 509
|||||| | ||| ||||||| ||||||||| |||||||| | | || ||||||| ||
Sbjct: 19542018 gcgctggagctggacctggtaggcgacccg-acctggtgtccaccaacgccgtggtctcc 19542076
Query: 510 ttcaagacggccatctggttctggatgacg 539
||||||||||||||||||||||||||||||
Sbjct: 19542077 ttcaagacggccatctggttctggatgacg 19542106
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 19540053 cttctacacgtacgacgccttcatcgccgccgcca 19540087
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 19523159 cttctacacgtacgacgccttcatcgccgccgcca 19523193
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 20687844 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 20687903
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 20687904 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 20687963
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 20687964 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 20688023
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 20688024 ccaacatcatcaacggcggcatcgagtgcggc 20688055
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 20700676 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 20700725
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 20686803 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 20686852
Score = 67.9 bits (34), Expect = 1e-008
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 450 gcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtggtagcc 509
|||||| | ||| ||||||| ||||||||| |||||||| | | || ||||||| ||
Sbjct: 20702558 gcgctggagctggacctggtaggcgacccg-acctggtgtccaccaacgccgtggtctcc 20702616
Query: 510 ttcaagacggccatctggttctggatgacg 539
||||||||||||||||||||||||||||||
Sbjct: 20702617 ttcaagacggccatctggttctggatgacg 20702646
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 20700593 cttctacacgtacgacgccttcatcgccgccgcca 20700627
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 20686720 cttctacacgtacgacgccttcatcgccgccgcca 20686754
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 103 bits (52), Expect = 2e-019
Identities = 172/212 (81%)
Strand = Plus / Plus
Query: 463 acctggtgggcgacccggacctggtggcgagagaccccgtggtagccttcaagacggcca 522
||||||||||| |||| ||||||||| | | ||| ||||||| |||||||||||||||
Sbjct: 20699116 acctggtgggcaacccagacctggtgtccaccgacgccgtggtctccttcaagacggcca 20699175
Query: 523 tctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtgatgaccggcg 582
||||||||||||||||| ||||| | ||||||||||||||||| ||| || ||||
Sbjct: 20699176 tctggttctggatgacggcgcaggggaacaagccgtcgtgccacgacgtcatcctcggcc 20699235
Query: 583 actggacgccgtccgccaccgaccgcgccgccgggaggctccccggatatggcctcacct 642
||||||||||| || | ||| ||||||||| | ||||||| |||||| ||| |
Sbjct: 20699236 ggtggacgccgtcggcggcggacaccgccgccggccgcgtccccgggtatggcgtcatca 20699295
Query: 643 cgaacatcatcaacggcgggctagagtgcggc 674
| ||||||||||||||||| | |||||||||
Sbjct: 20699296 ccaacatcatcaacggcggcatcgagtgcggc 20699327
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 20711948 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 20711997
Score = 83.8 bits (42), Expect = 2e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 262 ggcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccggt 311
||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 20698075 ggcgggagctcgccgccttcttcggccagacctcccacgagaccaccggt 20698124
Score = 67.9 bits (34), Expect = 1e-008
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 450 gcgctgaacctgaacctggtgggcgacccggacctggtggcgagagaccccgtggtagcc 509
|||||| | ||| ||||||| ||||||||| |||||||| | | || ||||||| ||
Sbjct: 20713830 gcgctggagctggacctggtaggcgacccg-acctggtgtccaccaacgccgtggtctcc 20713888
Query: 510 ttcaagacggccatctggttctggatgacg 539
||||||||||||||||||||||||||||||
Sbjct: 20713889 ttcaagacggccatctggttctggatgacg 20713918
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 20711865 cttctacacgtacgacgccttcatcgccgccgcca 20711899
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgcca 216
||||||||| |||||||||||||||| |||||||
Sbjct: 20697992 cttctacacgtacgacgccttcatcgccgccgcca 20698026
>gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmChiI-34 mRNA, partial cds
Length = 894
Score = 101 bits (51), Expect = 7e-019
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 511 tcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccg 570
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 626 tcaagacggcgttctggttctggatgaccccgcagtcgcccaagccgtcgtgccacgcgg 685
Query: 571 tgatgac 577
|||||||
Sbjct: 686 tgatgac 692
Score = 50.1 bits (25), Expect = 0.002
Identities = 103/129 (79%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccac 241
|||||||||||||||||||||| ||| ||||||| | ||||| |||||| ||| ||
Sbjct: 252 cttctacacctacgacgccttcgtcgccgccgccaacgccttcccgagcttcgccacaac 311
Query: 242 cggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacga 301
|||||||| || |||| ||| ||| ||||||| ||| | | ||||||||||||||
Sbjct: 312 cggcgacgccgccacccgcaagcgcgaggtcgccgcgttcctggcgcagacgtcccacga 371
Query: 302 aaccaccgg 310
||||||||
Sbjct: 372 gaccaccgg 380
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
sequence
Length = 153247
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95202 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 95254
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 95331 aacatcatcaacggcgggctggagtgcggc 95360
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 94817 cttctacacctacgacgccttcgtcgccgccgccagc 94853
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 288 cagacgtcccacgaaaccaccggtggatgggcgac 322
|||||||||||||| |||||||| || ||||||||
Sbjct: 94926 cagacgtcccacgagaccaccggcgggtgggcgac 94960
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
sequence
Length = 115326
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36553 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 36605
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 36682 aacatcatcaacggcgggctggagtgcggc 36711
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 36168 cttctacacctacgacgccttcgtcgccgccgccagc 36204
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 288 cagacgtcccacgaaaccaccggtggatgggcgac 322
|||||||||||||| |||||||| || ||||||||
Sbjct: 36277 cagacgtcccacgagaccaccggcgggtgggcgac 36311
>gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006925, whole
genome shotgun sequence
Length = 31428
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23191 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 23139
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 23062 aacatcatcaacggcgggctggagtgcggc 23033
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 23578 cttctacacctacgacgccttcgtcgccgccgccagc 23542
>ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 981
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 755
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 832 aacatcatcaacggcgggctggagtgcggc 861
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 318 cttctacacctacgacgccttcgtcgccgccgccagc 354
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 288 cagacgtcccacgaaaccaccggtggatgggcgac 322
|||||||||||||| |||||||| || ||||||||
Sbjct: 427 cagacgtcccacgagaccaccggcgggtgggcgac 461
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 97.6 bits (49), Expect = 1e-017
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 516 acggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 568
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683546 acggccttctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgc 683598
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 645 aacatcatcaacggcgggctagagtgcggc 674
|||||||||||||||||||| |||||||||
Sbjct: 683675 aacatcatcaacggcgggctggagtgcggc 683704
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttcatcgaggccgccagc 218
|||||||||||||||||||||| ||| |||||||||
Sbjct: 683161 cttctacacctacgacgccttcgtcgccgccgccagc 683197
Score = 46.1 bits (23), Expect = 0.038
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 288 cagacgtcccacgaaaccaccggtggatgggcgac 322
|||||||||||||| |||||||| || ||||||||
Sbjct: 683270 cagacgtcccacgagaccaccggcgggtgggcgac 683304
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,489,403
Number of Sequences: 438736
Number of extensions: 1489403
Number of successful extensions: 13303
Number of sequences better than 0.5: 90
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12228
Number of HSP's gapped (non-prelim): 1037
length of query: 1027
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1006
effective length of database: 2,791,206,460
effective search space: 2807953698760
effective search space used: 2807953698760
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)