BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.489
(1666 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|D12637.1|RICATADPT Oryza sativa (japonica cultivar-grou... 973 0.0
dbj|AK073448.1| Oryza sativa (japonica cultivar-group) cDNA... 973 0.0
dbj|AK119207.1| Oryza sativa (japonica cultivar-group) cDNA... 973 0.0
ref|XM_467495.1| Oryza sativa (japonica cultivar-group), mRNA 973 0.0
ref|XM_506941.2| PREDICTED Oryza sativa (japonica cultivar-... 973 0.0
ref|XM_507526.1| PREDICTED Oryza sativa (japonica cultivar-... 973 0.0
dbj|AK100143.1| Oryza sativa (japonica cultivar-group) cDNA... 965 0.0
gb|CB650964.1|CB650964 OSJNEb15L12.f OSJNEb Oryza sativa (j... 777 0.0
gb|CB675587.1|CB675587 OSJNEe11G19.f OSJNEe Oryza sativa (j... 771 0.0
gb|CA997872.1|CA997872 S234B1_F03 Rice cold stress germinat... 696 0.0
gb|CB643568.1|CB643568 OSJNEb04F08.f OSJNEb Oryza sativa (j... 660 0.0
gb|CF323606.1|CF323606 HDN--04-E18.g1 OsHDAC1-overexpressin... 622 e-175
gb|CB643532.1|CB643532 OSJNEb04E07.f OSJNEb Oryza sativa (j... 597 e-168
gb|CB646017.1|CB646017 OSJNEb08C13.f OSJNEb Oryza sativa (j... 591 e-166
gb|CB646356.1|CB646356 OSJNEb08M11.r OSJNEb Oryza sativa (j... 555 e-155
gb|CB675588.1|CB675588 OSJNEe11G19.r OSJNEe Oryza sativa (j... 555 e-155
gb|AU165513.1|AU165513 AU165513 Rice panicle at flowering s... 539 e-150
gb|CB650965.1|CB650965 OSJNEb15L12.r OSJNEb Oryza sativa (j... 535 e-149
gb|CB643533.1|CB643533 OSJNEb04E07.r OSJNEb Oryza sativa (j... 519 e-144
gb|CB643569.1|CB643569 OSJNEb04F08.r OSJNEb Oryza sativa (j... 509 e-141
dbj|AK061642.1| Oryza sativa (japonica cultivar-group) cDNA... 490 e-135
dbj|AK103134.1| Oryza sativa (japonica cultivar-group) cDNA... 490 e-135
dbj|AK103615.1| Oryza sativa (japonica cultivar-group) cDNA... 490 e-135
gb|CB682360.1|CB682360 OSJNEf09J13.f OSJNEf Oryza sativa (j... 448 e-123
gb|CB683212.1|CB683212 OSJNEf11E21.f OSJNEf Oryza sativa (j... 442 e-121
gb|CB685073.1|CB685073 OSJNEf15D07.f OSJNEf Oryza sativa (j... 428 e-117
gb|AACV01005297.1| Oryza sativa (japonica cultivar-group) c... 428 e-117
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 428 e-117
dbj|AP004098.3| Oryza sativa (japonica cultivar-group) geno... 428 e-117
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 428 e-117
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 428 e-117
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 428 e-117
gb|CA998048.1|CA998048 ERDCA_G03 Rice cold stress germinati... 385 e-104
gb|CA998066.1|CA998066 ERDCA_H02 Rice cold stress germinati... 385 e-104
gb|AU108585.1|AU108585 AU108585 Rice callus Oryza sativa (j... 377 e-101
gb|C73690.1|C73690 C73690 Rice panicle (longer than 10cm) O... 369 3e-099
gb|D49042.2|D49042 RICS15662A Rice green shoot Oryza sativa... 327 1e-086
gb|D25150.1|D25150 RICR3368A Rice root Oryza sativa (japoni... 325 4e-086
gb|CB674992.1|CB674992 OSJNEe10G10.r OSJNEe Oryza sativa (j... 323 2e-085
gb|AU093933.1|AU093933 AU093933 Rice panicle at flowering s... 321 7e-085
gb|AU162396.1|AU162396 AU162396 Rice root Oryza sativa (jap... 319 3e-084
gb|CB662208.1|CB662208 OSJNEd06A07.r OSJNEd Oryza sativa (j... 313 2e-082
gb|CF323991.1|CF323991 HDN--05-F05.g1 OsHDAC1-overexpressin... 313 2e-082
gb|CB643997.1|CB643997 OSJNEb05A03.r OSJNEb Oryza sativa (j... 307 1e-080
dbj|AP004040.3| Oryza sativa (japonica cultivar-group) geno... 305 4e-080
gb|CF323587.1|CF323587 HDN--04-D22.g1 OsHDAC1-overexpressin... 303 2e-079
gb|C97901.1|C97901 C97901 Rice callus Oryza sativa (japonic... 301 6e-079
gb|C72484.1|C72484 C72484 Rice panicle at flowering stage O... 299 3e-078
gb|CF307391.1|CF307391 HDA1--06-J05.g1 OsHDAC1-overexpressi... 297 1e-077
gb|CA997891.1|CA997891 S234B1_G09 Rice cold stress germinat... 295 4e-077
gb|D39095.1|D39095 RICR1934A Rice root Oryza sativa (japoni... 291 6e-076
gb|AU093210.1|AU093210 AU093210 Rice callus Oryza sativa (j... 291 6e-076
gb|AU093987.1|AU093987 AU093987 Rice panicle at flowering s... 291 6e-076
gb|CB662831.1|CB662831 OSJNEd07D10.f OSJNEd Oryza sativa (j... 291 6e-076
gb|CX728054.1|CX728054 OSJNEd07D10.r OSJNEd Oryza sativa (j... 291 6e-076
gb|D15768.1|D15768 RICC1214A Rice callus Oryza sativa (japo... 289 2e-075
gb|D23045.1|D23045 RICC2089A Rice callus Oryza sativa (japo... 287 1e-074
gb|CF319758.1|CF319758 HD--10-G04.g1 OsHDAC1-overexpressing... 287 1e-074
gb|AU093981.1|AU093981 AU093981 Rice panicle at flowering s... 272 6e-070
gb|CF305172.1|CF305172 ABF1--06-P17.g1 ABF3-overexpressing ... 270 2e-069
gb|CF280382.1|CF280382 14ETL--07-A14.g1 Rice etiolated leaf... 268 9e-069
gb|AU055896.1|AU055896 AU055896 Oryza sativa mature leaf Ni... 266 4e-068
gb|AU162526.1|AU162526 AU162526 Rice root Oryza sativa (jap... 252 5e-064
gb|CB643996.1|CB643996 OSJNEb05A03.f OSJNEb Oryza sativa (j... 248 8e-063
gb|AU065707.1|AU065707 AU065707 Rice cDNA from immature lea... 240 2e-060
gb|AU197468.1|AU197468 AU197468 Rice green shoot Oryza sati... 240 2e-060
gb|AC098572.2| Oryza sativa (japonica cultivar-group) chrom... 228 8e-057
gb|AACV01011667.1| Oryza sativa (japonica cultivar-group) c... 228 8e-057
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 228 8e-057
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 228 8e-057
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 228 8e-057
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 228 8e-057
gb|C26502.1|C26502 C26502 Rice callus cDNA Oryza sativa (ja... 220 2e-054
gb|AU030462.1|AU030462 AU030462 Rice cDNA from immature lea... 218 7e-054
gb|CB674991.1|CB674991 OSJNEe10G10.f OSJNEe Oryza sativa (j... 216 3e-053
gb|CB662207.1|CB662207 OSJNEd06A07.f OSJNEd Oryza sativa (j... 214 1e-052
gb|AU165461.1|AU165461 AU165461 Rice panicle at flowering s... 208 7e-051
gb|D24622.1|D24622 RICR2266A Rice root Oryza sativa (japoni... 206 3e-050
gb|AU094027.1|AU094027 AU094027 Rice panicle at flowering s... 202 4e-049
gb|CF320093.1|CF320093 HD--10-N12.b1 OsHDAC1-overexpressing... 194 1e-046
gb|AU030256.1|AU030256 AU030256 Rice cDNA from immature lea... 190 2e-045
gb|C73148.1|C73148 C73148 Rice panicle at flowering stage O... 188 7e-045
gb|AU092221.1|AU092221 AU092221 Rice callus Oryza sativa (j... 186 3e-044
gb|AU184146.1|AU184146 AU184146 Rice root Oryza sativa (jap... 182 4e-043
gb|AU056767.1|AU056767 AU056767 Oryza sativa mature leaf Ni... 180 2e-042
gb|AU091711.1|AU091711 AU091711 Rice mature leaf Oryza sati... 180 2e-042
gb|AU172944.1|AU172944 AU172944 Rice immature leaf includin... 180 2e-042
gb|AU181327.1|AU181327 AU181327 Rice callus (2001) Oryza sa... 180 2e-042
gb|D47395.1|D47395 RICS12780A Rice green shoot Oryza sativa... 178 6e-042
gb|AU032164.1|AU032164 AU032164 Rice root Oryza sativa (jap... 176 3e-041
gb|AU181974.1|AU181974 AU181974 Rice callus (2001) Oryza sa... 176 3e-041
gb|AU184320.1|AU184320 AU184320 Rice root Oryza sativa (jap... 176 3e-041
gb|CF318884.1|CF318884 HD--09-D01.b1 OsHDAC1-overexpressing... 172 4e-040
gb|AU075415.1|AU075415 AU075415 Rice panicle at flowering s... 168 6e-039
gb|C28991.1|C28991 C28991 Rice callus cDNA Oryza sativa (ja... 165 1e-037
gb|CF280381.1|CF280381 14ETL--07-A14.b1 Rice etiolated leaf... 165 1e-037
gb|AU197724.1|AU197724 AU197724 Rice mature leaf Oryza sati... 161 2e-036
gb|CF318885.1|CF318885 HD--09-D01.g1 OsHDAC1-overexpressing... 161 2e-036
gb|CF319757.1|CF319757 HD--10-G04.b1 OsHDAC1-overexpressing... 161 2e-036
gb|AU182543.1|AU182543 AU182543 Rice panicle at flowering s... 159 6e-036
gb|AU063863.1|AU063863 AU063863 Rice panicle at flowering s... 157 2e-035
gb|AU164118.1|AU164118 AU164118 Rice panicle (longer than 1... 157 2e-035
gb|C71806.1|C71806 C71806 Rice panicle at flowering stage O... 153 4e-034
gb|D41566.1|D41566 RICS4141A Rice shoot Oryza sativa (japon... 149 6e-033
gb|D47526.1|D47526 RICS13079A Rice green shoot Oryza sativa... 149 6e-033
gb|C25988.1|C25988 C25988 Rice callus cDNA Oryza sativa (ja... 147 2e-032
gb|C72280.1|C72280 C72280 Rice panicle at flowering stage O... 147 2e-032
gb|C72519.1|C72519 C72519 Rice panicle at flowering stage O... 147 2e-032
gb|C72701.1|C72701 C72701 Rice panicle at flowering stage O... 147 2e-032
gb|D24064.1|D24064 RICR1041A Rice root Oryza sativa (japoni... 147 2e-032
gb|D24433.1|D24433 RICR1884A Rice root Oryza sativa (japoni... 147 2e-032
gb|D24774.1|D24774 RICR2538A Rice root Oryza sativa (japoni... 147 2e-032
gb|AU032400.1|AU032400 AU032400 Rice root Oryza sativa (jap... 147 2e-032
gb|AU063917.1|AU063917 AU063917 Rice panicle at flowering s... 147 2e-032
gb|AU063873.2|AU063873 AU063873 Rice panicle at flowering s... 147 2e-032
gb|AU184347.1|AU184347 AU184347 Rice root Oryza sativa (jap... 147 2e-032
gb|CB654379.1|CB654379 OSJNEc06K22.r OSJNEc Oryza sativa (j... 147 2e-032
gb|CF278520.1|CF278520 14ETL--04-H09.g1 Rice etiolated leaf... 147 2e-032
gb|CF324375.1|CF324375 HDN--06-F21.g1 OsHDAC1-overexpressin... 147 2e-032
gb|D47508.1|D47508 RICS13052A Rice green shoot Oryza sativa... 145 9e-032
gb|AU063905.1|AU063905 AU063905 Rice panicle at flowering s... 145 9e-032
gb|D24125.1|D24125 RICR1401A Rice root Oryza sativa (japoni... 143 4e-031
gb|AU096230.1|AU096230 AU096230 Rice green shoot Oryza sati... 141 1e-030
gb|AU184348.1|AU184348 AU184348 Rice root Oryza sativa (jap... 137 2e-029
gb|CF195963.1|CF195963 Azbi2.1_H05 AZ-BI Oryza sativa (japo... 137 2e-029
gb|C26148.1|C26148 C26148 Rice callus cDNA Oryza sativa (ja... 135 9e-029
gb|D22519.1|D22519 RICC0092A Rice callus Oryza sativa (japo... 135 9e-029
gb|AU032246.1|AU032246 AU032246 Rice root Oryza sativa (jap... 135 9e-029
gb|C73115.1|C73115 C73115 Rice panicle at flowering stage O... 127 2e-026
gb|AU184683.1|AU184683 AU184683 Rice root Oryza sativa (jap... 113 3e-022
gb|CA997871.1|CA997871 S234B1_F02 Rice cold stress germinat... 111 1e-021
gb|CF338448.1|CF338448 RCL1--01-L09.g1 Regenerated callus l... 98 2e-017
gb|CF339061.1|CF339061 RCL1--03-K14.g1 Regenerated callus l... 98 2e-017
gb|CF340502.1|CF340502 RCL1--08-D16.g1 Regenerated callus l... 98 2e-017
gb|AU093942.1|AU093942 AU093942 Rice panicle at flowering s... 94 3e-016
gb|C98531.1|C98531 C98531 Rice panicle at flowering stage O... 88 2e-014
gb|AU069332.1|AU069332 AU069332 Rice callus Oryza sativa (j... 88 2e-014
gb|AU181939.1|AU181939 AU181939 Rice callus (2001) Oryza sa... 88 2e-014
gb|AU181973.1|AU181973 AU181973 Rice callus (2001) Oryza sa... 88 2e-014
gb|AU197469.1|AU197469 AU197469 Rice green shoot Oryza sati... 86 7e-014
gb|CV723180.1|CV723180 root--02-L18.g1 Rice root lambda pha... 86 7e-014
gb|AU172374.1|AU172374 AU172374 Rice callus (2001) Oryza sa... 74 3e-010
gb|CF320094.1|CF320094 HD--10-N12.g1 OsHDAC1-overexpressing... 68 2e-008
dbj|AK064725.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
gb|CA998016.1|CA998016 S234X_C09 Rice cold stress germinati... 58 2e-005
dbj|AK110815.1| Oryza sativa (japonica cultivar-group) cDNA... 58 2e-005
gb|BU099187.1|BU099187 S234-XC9 Rice cold stress germinatio... 50 0.004
dbj|AK108179.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.016
dbj|AK099435.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
gb|AC146592.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
dbj|AP005908.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 46 0.061
gb|AACV01016624.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01023718.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
ref|XM_478783.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.061
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 46 0.061
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 46 0.061
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 46 0.061
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
>dbj|D12637.1|RICATADPT Oryza sativa (japonica cultivar-group) mRNA for ATP/ADP translocator,
complete cds
Length = 1564
Score = 973 bits (491), Expect = 0.0
Identities = 851/967 (88%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 322 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 381
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 382 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 441
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 442 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 501
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 502 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 561
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 562 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 621
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 622 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 681
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 682 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 741
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 801
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 802 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 861
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 862 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaat 921
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 922 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 981
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 982 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1041
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1042 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1101
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1102 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1161
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1162 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1221
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1222 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1280
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1281 gaacaag 1287
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 113 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 172
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 173 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 232
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 233 gacaggcgctttaccacaaggagctacatgacccagggcctt 274
>dbj|AK073448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045A20, full
insert sequence
Length = 1618
Score = 973 bits (491), Expect = 0.0
Identities = 851/967 (88%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 375 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 434
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 435 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 494
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 495 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 554
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 555 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 614
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 615 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 674
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 675 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 734
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 735 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 794
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 854
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 855 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 914
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 915 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaat 974
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 975 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 1034
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 1035 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1094
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1095 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1154
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1155 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1214
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1215 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1274
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1275 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1333
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1334 gaacaag 1340
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 166 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 225
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 226 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 285
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 286 gacaggcgctttaccacaaggagctacatgacccagggcctt 327
>dbj|AK119207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E01, full
insert sequence
Length = 1578
Score = 973 bits (491), Expect = 0.0
Identities = 851/967 (88%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 335 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 394
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 395 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 454
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 455 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 514
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 515 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 574
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 575 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 634
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 635 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 694
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 695 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 754
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 814
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 815 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 874
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 875 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaat 934
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 935 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 994
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 995 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1054
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1055 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1114
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1115 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1174
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1175 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1234
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1235 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1293
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1294 gaacaag 1300
Score = 139 bits (70), Expect = 6e-030
Identities = 139/162 (85%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 126 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 185
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 186 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 245
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| |||| |||||||| |||||
Sbjct: 246 gacaggcgctttaccacaaggagctacgtgacccagggcctt 287
>ref|XM_467495.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1577
Score = 973 bits (491), Expect = 0.0
Identities = 851/967 (88%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 334 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 393
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 394 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 453
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 454 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 513
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 514 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 573
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 574 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 633
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 634 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 693
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 694 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 753
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 813
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 814 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 873
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 874 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaat 933
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 934 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 993
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 994 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1053
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1054 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1113
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1114 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1173
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1174 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1233
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1234 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1292
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1293 gaacaag 1299
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 125 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 184
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 185 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 244
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 245 gacaggcgctttaccacaaggagctacatgacccagggcctt 286
>ref|XM_506941.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ2056_H01.33 mRNA
Length = 1619
Score = 973 bits (491), Expect = 0.0
Identities = 851/967 (88%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 376 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 435
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 436 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 495
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 496 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 555
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 556 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 615
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 616 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 675
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 676 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 735
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 736 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 795
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 855
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 856 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 915
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 916 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaat 975
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 976 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 1035
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 1036 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1095
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1096 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1155
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1156 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1215
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1216 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1275
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1276 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1334
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1335 gaacaag 1341
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 167 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 226
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 227 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 286
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 287 gacaggcgctttaccacaaggagctacatgacccagggcctt 328
>ref|XM_507526.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ2056_H01.33 mRNA
Length = 1578
Score = 973 bits (491), Expect = 0.0
Identities = 851/967 (88%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 335 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 394
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 395 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 454
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 455 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 514
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 515 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 574
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 575 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 634
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 635 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 694
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 695 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 754
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 814
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 815 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 874
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 875 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaat 934
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 935 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 994
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 995 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1054
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1055 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1114
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1115 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1174
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1175 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1234
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1235 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1293
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1294 gaacaag 1300
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 126 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 185
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 186 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 245
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 246 gacaggcgctttaccacaaggagctacatgacccagggcctt 287
>dbj|AK100143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011P12, full
insert sequence
Length = 1577
Score = 965 bits (487), Expect = 0.0
Identities = 850/967 (87%), Gaps = 3/967 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 334 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 393
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 394 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 453
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 454 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 513
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 514 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 573
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 574 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 633
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 634 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 693
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 694 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 753
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 813
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 814 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 873
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggct 969
|||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||| |
Sbjct: 874 ccgtggatttaacatctcatgtgttgaaatcattgtctaccgtggtctgtactttggaat 933
Query: 970 ctatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccag 1029
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 934 gtatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaag 993
Query: 1030 tttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatac 1089
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| |||||
Sbjct: 994 ctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatac 1053
Query: 1090 cgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttgga 1149
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 1054 cgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatgga 1113
Query: 1150 cgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgc 1209
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 1114 tgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgc 1173
Query: 1210 taacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagat 1269
||||| || |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1174 caacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagat 1233
Query: 1270 cctcttcttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgac 1327
||||||||| ||||||||||||||||| |||||||| |||| ||| ||||| ||||||||
Sbjct: 1234 cctcttctttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgac 1292
Query: 1328 gaacaag 1334
|||||||
Sbjct: 1293 gaacaag 1299
Score = 155 bits (78), Expect = 9e-035
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 125 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 184
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 185 ggctccagcttttctgaaggtgtacgggctcgtaacatctgcccatctgtctcatcctat 244
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 245 gacaggcgctttaccacaaggagctacatgacccagggcctt 286
>gb|CB650964.1|CB650964 OSJNEb15L12.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15L12 5', mRNA sequence
Length = 786
Score = 777 bits (392), Expect = 0.0
Identities = 671/764 (87%)
Strand = Plus / Plus
Query: 542 ggtattgttgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggagg 601
||||||| ||||||||| ||| || || |||||||| ||||| |||| ||||||||
Sbjct: 1 ggtattggggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggaga 60
Query: 602 ggtaacactgctaatgttattcgttacttccctactcaggctttgaactttgcatttaag 661
|| |||||||| ||||| || ||||||||||| || ||||||||||||||||| || |||
Sbjct: 61 ggaaacactgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaag 120
Query: 662 gactacttcaagaggttgttcaacttcaagaaggatagggatggctattggaagtggttt 721
|| |||||||||||| |||||||||||||||| || | |||||| || ||||||||||||
Sbjct: 121 gattacttcaagaggctgttcaacttcaagaaagacaaggatggttactggaagtggttt 180
Query: 722 gctggcaacctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactcc 781
| ||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 181 ggtggcaaccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcc 240
Query: 782 ctggactacgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaa 841
|| ||||| || || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 cttgactatgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaa 300
Query: 842 aggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgct 901
|||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 301 aggcagttcaatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgct 360
Query: 902 gggctttaccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtac 961
||| | |||||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 361 gggttgtaccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtac 420
Query: 962 tttgggctctatgattccatcaagccagttgtccttactggcaacctccaggacaatttc 1021
||||| | |||||||| | ||||||||||| || ||||| |||||||||||||||
Sbjct: 421 tttggaatgtatgattctctgaagccagttgtactcactgggtctctccaggacaatttc 480
Query: 1022 tttgccagtttcgctctgggttggctgatcactaatggtgctggtcttgcatcttacccc 1081
||||| || || || || || ||||||||||| || ||||| |||||||| |||||||||
Sbjct: 481 tttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttacccc 540
Query: 1082 atcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagc 1141
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 541 attgataccgtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagc 600
Query: 1142 tccttggacgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggt 1201
||| |||| || ||| ||||| || ||||| || || ||||||| ||||||||||||
Sbjct: 601 tccatggatgctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggt 660
Query: 1202 gctggtgctaacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccag 1261
|||||||| ||||| || |||||||||||||||||||||||||| || ||||||||||||
Sbjct: 661 gctggtgccaacatcctacgtgccattgctggtgctggtgtgctctcaggctatgaccag 720
Query: 1262 ctccagatcctcttcttcggaaagaagtacggctccggcggtgc 1305
|| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 721 ctgcagatcctcttctttggaaagaagtacggctcgggcggtgc 764
>gb|CB675587.1|CB675587 OSJNEe11G19.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11G19 5', mRNA sequence
Length = 847
Score = 771 bits (389), Expect = 0.0
Identities = 662/749 (88%), Gaps = 3/749 (0%)
Strand = Plus / Plus
Query: 588 cttccttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttga 647
|||| |||||||| || |||||||| ||||| || ||||||||||| || ||||||||||
Sbjct: 7 cttcattgtggagaggaaacactgccaatgtgatccgttacttccccacccaggctttga 66
Query: 648 actttgcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggct 707
||||||| || ||||| |||||||||||| |||||||||||||||| || | |||||| |
Sbjct: 67 actttgctttcaaggattacttcaagaggctgttcaacttcaagaaagacaaggatggtt 126
Query: 708 attggaagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgt 767
| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||
Sbjct: 127 actggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgcttcatctctgt 186
Query: 768 tttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgcca 827
|||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||||
Sbjct: 187 tttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcgaaggctgcca 246
Query: 828 agggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagt 887
|||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 247 agggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaagactctcaagt 306
Query: 888 ctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaatcattgttt 947
| ||||| ||||||||| | |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 307 cagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaatcattgtct 366
Query: 948 atcgtggtctgtactttgggctctatgattccatcaagccagttgtccttactggcaacc 1007
| ||||||||||||||||| | |||||||| | ||||||||||| || ||||| |
Sbjct: 367 accgtggtctgtactttggaatgtatgattctctgaagccagttgtactcactgggtctc 426
Query: 1008 tccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtc 1067
||||||||||||||||||| || || || || || ||||||||||| || ||||| ||||
Sbjct: 427 tccaggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtc 486
Query: 1068 ttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctg 1127
|||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 487 ttgcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctg 546
Query: 1128 tcaagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagt 1187
||||||||||||||||| |||| || ||| ||||| || ||||| || || ||||||
Sbjct: 547 tcaagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagt 606
Query: 1188 ccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgcttt 1247
| |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| |
Sbjct: 607 cactgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctct 666
Query: 1248 ctggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgctt 1307
| |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 667 caggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcct 726
Query: 1308 aaa-tgg-agaaatatgatgacgaacaag 1334
||| ||| ||||| |||||||||||||||
Sbjct: 727 aaactggcagaaa-atgatgacgaacaag 754
>gb|CA997872.1|CA997872 S234B1_F03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 673
Score = 696 bits (351), Expect = 0.0
Identities = 591/671 (88%)
Strand = Plus / Plus
Query: 443 gtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttattcagaaccaagat 502
||||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||
Sbjct: 3 gtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttatccagaaccaggat 62
Query: 503 gagatgattaagtctggtaggctatcagagccgtacaagggtattgttgactgcttcaaa 562
|| ||||| ||| |||||||||| |||||||| ||||||||||||| ||||||||| |
Sbjct: 63 gaaatgatcaaggctggtaggctctcagagccatacaagggtattggggactgcttcgga 122
Query: 563 cgtaccattaaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttatt 622
|| || || |||||||| ||||| |||| |||||||| || |||||||| ||||| ||
Sbjct: 123 cgcactatcaaggatgagggttttgcttcattgtggagaggaaacactgccaatgtgatc 182
Query: 623 cgttacttccctactcaggctttgaactttgcatttaaggactacttcaagaggttgttc 682
||||||||||| || ||||||||||||||||| || ||||| |||||||||||| |||||
Sbjct: 183 cgttacttccccacccaggctttgaactttgctttcaaggattacttcaagaggctgttc 242
Query: 683 aacttcaagaaggatagggatggctattggaagtggtttgctggcaacctggcctctggt 742
||||||||||| || | |||||| || ||||||||||||| ||||||||| |||||||||
Sbjct: 243 aacttcaagaaagacaaggatggttactggaagtggtttggtggcaaccttgcctctggt 302
Query: 743 ggtgctgctggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaagg 802
||||||||||||||||| ||| ||||||||||||||||||| ||||| || || ||||||
Sbjct: 303 ggtgctgctggtgcttcatctctgttttttgtgtactcccttgactatgctaggacaagg 362
Query: 803 ttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtc 862
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 363 ttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggccttgtg 422
Query: 863 gatgtctaccgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaac 922
||||| ||||||||||| |||||||| ||||| ||||||||| | |||||||||||||||
Sbjct: 423 gatgtttaccgcaagactctcaagtcagatggcattgctgggttgtaccgtggatttaac 482
Query: 923 atctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgattccatc 982
||||| ||||||||||||||||| || ||||||||||||||||| | |||||||| |
Sbjct: 483 atctcatgtgttggaatcattgtctaccgtggtctgtactttggaatgtatgattctctg 542
Query: 983 aagccagttgtccttactggcaacctccaggacaatttctttgccagtttcgctctgggt 1042
||||||||||| || ||||| |||||||||||||||||||| || || || || ||
Sbjct: 543 aagccagttgtactcactgggtctctccaggacaatttctttgcaagctttgcccttggg 602
Query: 1043 tggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaagg 1102
||||||||||| || ||||| |||||||| ||||||||||| |||||||||||||||| |
Sbjct: 603 tggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaaag 662
Query: 1103 atgatgatgac 1113
|||||||||||
Sbjct: 663 atgatgatgac 673
>gb|CB643568.1|CB643568 OSJNEb04F08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04F08 5', mRNA sequence
Length = 836
Score = 660 bits (333), Expect = 0.0
Identities = 531/597 (88%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 207 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 266
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 267 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 326
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 327 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 386
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 387 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 446
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 447 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 506
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 507 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 566
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 567 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 626
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 686
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 687 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 746
Query: 910 ccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgg 966
|||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 747 ccgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttgg 803
Score = 145 bits (73), Expect = 9e-032
Identities = 133/153 (86%)
Strand = Plus / Plus
Query: 155 caggctaaccaacccactgtccttcataagctcggtggccagttccacctgcgctcgatc 214
|||||||| ||||| ||||||||||| ||| ||||||||||||||||||| |||| | |
Sbjct: 7 caggctaatcaaccgactgtccttcagaagttcggtggccagttccaccttggctccagc 66
Query: 215 atctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttatgaaaggaga 274
| ||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||| |
Sbjct: 67 ttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctatgacaggcgc 126
Query: 275 tttgccacaaggaactacatgacccagagcctt 307
||| ||||||||| ||||||||||||| |||||
Sbjct: 127 tttaccacaaggagctacatgacccagggcctt 159
>gb|CF323606.1|CF323606 HDN--04-E18.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-E18, mRNA sequence
Length = 605
Score = 622 bits (314), Expect = e-175
Identities = 512/578 (88%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||| ||||| |||| |||||||| || |||||||| ||||| || |||||||||
Sbjct: 17 aaggatgagggttttgcttcattgtggagaggaaacactgccaatgtgatccgttacttc 76
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| || ||||||||||||||||| || ||||| |||||||||||| ||||||||||||||
Sbjct: 77 cccacccaggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaag 136
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || | |||||| || ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 137 aaagacaaggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgct 196
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
|||||||| ||| ||||||||||||||||||| ||||| || || ||||||||||| |||
Sbjct: 197 ggtgcttcatctctgttttttgtgtactcccttgactatgctaggacaaggttggccaat 256
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 257 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttac 316
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|||||||| |||||||| ||||| ||||||||| | |||||||||||||||||||| |||
Sbjct: 317 cgcaagactctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgt 376
Query: 932 gttggaatcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagtt 991
|||||||||||||| || ||||||||||||||||| | |||||||| | |||||||||
Sbjct: 377 gttggaatcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagtt 436
Query: 992 gtccttactggcaacctccaggacaatttctttgccagtttcgctctgggttggctgatc 1051
|| || ||||| |||||||||||||||||||| || || || || || |||||||||
Sbjct: 437 gtactcactgggtctctccaggacaatttctttgcaagctttgcccttgggtggctgatc 496
Query: 1052 actaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatg 1111
|| || ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 497 accaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaaggatgatgatg 556
Query: 1112 acatctggtgaggctgtcaagtacaagagctccttgga 1149
|| ||||| |||||||||||||||||||||||| ||||
Sbjct: 557 acctctggagaggctgtcaagtacaagagctccatgga 594
>gb|CB643532.1|CB643532 OSJNEb04E07.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04E07 5', mRNA sequence
Length = 771
Score = 597 bits (301), Expect = e-168
Identities = 501/568 (88%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 204 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 263
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 264 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 323
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 324 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 383
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 384 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 443
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 444 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 503
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 504 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 563
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 564 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 623
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 683
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| || |||| ||||| ||||||||| | ||
Sbjct: 684 caatggccttgtggatgtttaccgcaagactctncagtcagatggcattgctgggttgta 743
Query: 910 ccgtggatttaacatctcctgtgttgga 937
||| |||||||||||||| |||||||||
Sbjct: 744 ccggggatttaacatctcatgtgttgga 771
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 170 actgtccttcataagctcggtggccagttccacctgcgctcgatcatctctgaaggtgta 229
||||||||||| ||| ||||||||||||||||||| |||| | | | ||||||||||||
Sbjct: 19 actgtccttcagaagttcggtggccagttccaccttggctccagcttttctgaaggtgta 78
Query: 230 cgggcccgtaacatatgcccatctgtctcatcttatgaaaggagatttgccacaaggaac 289
||||| || ||||| ||||||||||||||||| ||||| ||| | ||| ||||||||| |
Sbjct: 79 cgggctcgcaacatctgcccatctgtctcatcctatgacaggcgctttaccacaaggagc 138
Query: 290 tacatgacccagagcctt 307
|||||||||||| |||||
Sbjct: 139 tacatgacccagggcctt 156
>gb|CB646017.1|CB646017 OSJNEb08C13.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08C13 5', mRNA sequence
Length = 882
Score = 591 bits (298), Expect = e-166
Identities = 494/558 (88%), Gaps = 1/558 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 326 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 385
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 386 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 445
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 446 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 505
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 506 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 565
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 566 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 625
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 626 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 685
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 686 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 745
Query: 790 cgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 849
|| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tgctaggacaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagtt 805
Query: 850 caatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttta 909
|||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | ||
Sbjct: 806 caatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgta 865
Query: 910 ccgtggatttaacatctc 927
||||||| ||||||||||
Sbjct: 866 ccgtgga-ttaacatctc 882
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 117 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 176
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 177 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 236
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 237 gacaggcgctttaccacaaggagctacatgacccagggcctt 278
>gb|CB646356.1|CB646356 OSJNEb08M11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08M11 3', mRNA sequence
Length = 819
Score = 555 bits (280), Expect = e-155
Identities = 478/540 (88%), Gaps = 3/540 (0%)
Strand = Plus / Minus
Query: 797 acaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggg 856
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 acaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggc 757
Query: 857 cttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggctttaccgtgga 916
||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | |||||||||
Sbjct: 756 cttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgtaccgtgga 697
Query: 917 tttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgat 976
||||||||||| ||||||||||||||||| || ||||||||||||||||| | ||||||
Sbjct: 696 tttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaatgtatgat 637
Query: 977 tccatcaagccagttgtccttactggcaacctccaggacaatttctttgccagtttcgct 1036
|| | ||||||||||| || ||||| |||||||||||||||||||| || || ||
Sbjct: 636 tctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaagctttgcc 577
Query: 1037 ctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgc 1096
|| || ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 576 cttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgc 517
Query: 1097 agaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttc 1156
||||||||||||||||| ||||| |||||||||||||||||||||||| |||| || |||
Sbjct: 516 agaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttc 457
Query: 1157 cagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacatt 1216
||||| || ||||| || || ||||||| |||||||||||||||||||| |||||
Sbjct: 456 tcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatc 397
Query: 1217 cttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttc 1276
|| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 396 ctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttc 337
Query: 1277 ttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
|| ||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 336 tttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 278
>gb|CB675588.1|CB675588 OSJNEe11G19.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11G19 3', mRNA sequence
Length = 818
Score = 555 bits (280), Expect = e-155
Identities = 478/540 (88%), Gaps = 3/540 (0%)
Strand = Plus / Minus
Query: 797 acaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggg 856
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 acaaggttggccaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggc 758
Query: 857 cttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggctttaccgtgga 916
||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | |||||||||
Sbjct: 757 cttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgtaccgtgga 698
Query: 917 tttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgat 976
||||||||||| ||||||||||||||||| || ||||||||||||||||| | ||||||
Sbjct: 697 tttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaatgtatgat 638
Query: 977 tccatcaagccagttgtccttactggcaacctccaggacaatttctttgccagtttcgct 1036
|| | ||||||||||| || ||||| |||||||||||||||||||| || || ||
Sbjct: 637 tctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaagctttgcc 578
Query: 1037 ctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgc 1096
|| || ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 577 cttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgc 518
Query: 1097 agaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttc 1156
||||||||||||||||| ||||| |||||||||||||||||||||||| |||| || |||
Sbjct: 517 agaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttc 458
Query: 1157 cagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacatt 1216
||||| || ||||| || || ||||||| |||||||||||||||||||| |||||
Sbjct: 457 tcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatc 398
Query: 1217 cttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttc 1276
|| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 397 ctacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttc 338
Query: 1277 ttcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
|| ||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 337 tttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 279
>gb|AU165513.1|AU165513 AU165513 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2037, mRNA sequence
Length = 718
Score = 539 bits (272), Expect = e-150
Identities = 499/568 (87%), Gaps = 5/568 (0%)
Strand = Plus / Plus
Query: 770 tttgtgtactccc-tggactacgcgagaacaaggttggctaatgatgcgaaggctgccaa 828
||||||||||||| | ||||| || || ||||| ||||| ||||||||||||||||||||
Sbjct: 1 tttgtgtactccccttgactatgctaggacaag-ttggccaatgatgcgaaggctgccaa 59
Query: 829 gggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtc 888
|||||||| |||||||||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 60 gggaggagttgaaaggcagttcaatggccttgtggatgtttaccgcaagactctcaagtc 119
Query: 889 tgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaatcattgttta 948
||||| ||||||||| | |||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 120 agatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaatcattgtcta 179
Query: 949 tcgtggtctgtactttgggctctatgattccatcaagccagttgtccttactggcaacct 1008
||||||||||||||||| | |||||||| | ||||||||||| || ||||| ||
Sbjct: 180 ccgtggtctgtactttggaatgtatgattctctgaagccagttgtactcactgggtctct 239
Query: 1009 ccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtct 1068
|||||||||||||||||| || || || || || ||||||||||| || ||||| |||||
Sbjct: 240 ccaggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtct 299
Query: 1069 tgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgt 1128
||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 300 tgcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgt 359
Query: 1129 caagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtc 1188
|||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 360 caagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtc 419
Query: 1189 cctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttc 1248
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 420 actgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctc 479
Query: 1249 tggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgctta 1308
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 480 aggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgccta 539
Query: 1309 aa-tgg-agaaatatgatgacgaacaag 1334
|| ||| ||||| |||||||||||||||
Sbjct: 540 aactggcagaaa-atgatgacgaacaag 566
>gb|CB650965.1|CB650965 OSJNEb15L12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15L12 3', mRNA sequence
Length = 811
Score = 535 bits (270), Expect = e-149
Identities = 465/526 (88%), Gaps = 3/526 (0%)
Strand = Plus / Minus
Query: 811 tgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtcta 870
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 811 tgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgttta 752
Query: 871 ccgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctg 930
||||||||| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||
Sbjct: 751 ccgcaagactctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatg 692
Query: 931 tgttggaatcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagt 990
||||||||||||||| || ||||||||||||||||| | |||||||| | ||||||||
Sbjct: 691 tgttggaatcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagt 632
Query: 991 tgtccttactggcaacctccaggacaatttctttgccagtttcgctctgggttggctgat 1050
||| || ||||| |||||||||||||||||||| || || || || || ||||||||
Sbjct: 631 tgtactcactgggtctctccaggacaatttctttgcaagctttgcccttgggtggctgat 572
Query: 1051 cactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgat 1110
||| || ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 571 caccaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaaggatgatgat 512
Query: 1111 gacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaa 1170
||| ||||| |||||||||||||||||||||||| |||| || ||| ||||| || ||
Sbjct: 511 gacctctggagaggctgtcaagtacaagagctccatggatgctttctcccagatcctgaa 452
Query: 1171 gaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgc 1230
||| || || ||||||| |||||||||||||||||||| ||||| || |||||||||||
Sbjct: 451 gaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcctacgtgccattgc 392
Query: 1231 tggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcggaaagaagta 1290
||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 391 tggtgctggtgtgctctcaggctatgaccagctgcagatcctcttctttggaaagaagta 332
Query: 1291 cggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
|||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 331 cggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 287
>gb|CB643533.1|CB643533 OSJNEb04E07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04E07 3', mRNA sequence
Length = 808
Score = 519 bits (262), Expect = e-144
Identities = 457/518 (88%), Gaps = 3/518 (0%)
Strand = Plus / Minus
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 808 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 749
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 748 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 689
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 688 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 629
Query: 999 ctggcaacctccaggacaatttctttgccagtttcgctctgggttggctgatcactaatg 1058
|||| |||||||||||||||||||| || || || || || ||||||||||| || |
Sbjct: 628 ctgggtctctccaggacaatttctttgcaagctttgcccttgggtggctgatcaccaacg 569
Query: 1059 gtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctg 1118
|||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 568 gtgcaggtcttgcctcttaccccattgataccgtccgcagaaggatgatgatgacctctg 509
Query: 1119 gtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaaggaag 1178
| |||||||||||||||||||||||| |||| || ||| ||||| || ||||| || |
Sbjct: 508 gagaggctgtcaagtacaagagctccatggatgctttctcccagatcctgaagaacgagg 449
Query: 1179 ggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctg 1238
| ||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 448 gtgccaagtcactgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctg 389
Query: 1239 gtgtgctttctggctatgaccagctccagatcctcttcttcggaaagaagtacggctccg 1298
||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| |
Sbjct: 388 gtgtgctctcaggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgg 329
Query: 1299 gcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 328 gcggtgcctaaactggcagaaa-atgatgacgaacaag 292
>gb|CB643569.1|CB643569 OSJNEb04F08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04F08 3', mRNA sequence
Length = 821
Score = 509 bits (257), Expect = e-141
Identities = 466/529 (88%), Gaps = 5/529 (0%)
Strand = Plus / Minus
Query: 809 aatgatgcgaaggctgcc-aagggaggaggtgaaaggcagttcaatgggcttgtcgatgt 867
|||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 818 aatgatgcgaag-ctgcccaagggaggaggtgaaaggcagttcaatggccttgtggatgt 760
Query: 868 ctaccgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctc 927
||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 759 ttaccgcaagactctcaagtcagatggcattgctgggttgtaccgtggatttaacatctc 700
Query: 928 ctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgattccatcaagcc 987
||||||||||||||||| || ||||||||||||||||| | |||||||| | |||||
Sbjct: 699 atgtgttggaatcattgtctaccgtggtctgtactttggaatgtatgattctctgaagcc 640
Query: 988 agttgtccttactggcaacctccaggacaatttctttgccagtttcgctctgggttggct 1047
|||||| || ||||| |||||||||||||||||||| || || || || || |||||
Sbjct: 639 agttgtactcactgggtctctccaggacaatttctttgcaagctttgcccttgggtggct 580
Query: 1048 gatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgat 1107
|||||| || ||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 579 gatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaaggatgat 520
Query: 1108 gatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattct 1167
|||||| ||||| |||||||||||||||||||||||| |||| || ||| ||||| ||
Sbjct: 519 gatgacctctggagaggctgtcaagtacaagagctccatggatgctttctcccagatcct 460
Query: 1168 taagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccat 1227
||||| || || ||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 459 gaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcctacgtgccat 400
Query: 1228 tgctggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcggaaagaa 1287
|||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||
Sbjct: 399 tgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttctttggaaagaa 340
Query: 1288 gtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 339 gtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 292
>dbj|AK061642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B04, full
insert sequence
Length = 1568
Score = 490 bits (247), Expect = e-135
Identities = 727/887 (81%)
Strand = Plus / Plus
Query: 407 atgattgatttcatgatgggcggtgtttcagctgctgtttcaaagactgctgctgctccc 466
|||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 372 atgattgacttcatgatgggtggagtttcagctgctgtctccaagactgctgctgctccc 431
Query: 467 atcgagcgtgtgaagctgcttattcagaaccaagatgagatgattaagtctggtaggcta 526
|| ||||| | ||||| || ||||| ||||| ||||| ||||| ||| |||||||||
Sbjct: 432 attgagcgaatcaagcttctcattcaaaaccaggatgaaatgatcaagagtggtaggctc 491
Query: 527 tcagagccgtacaagggtattgttgactgcttcaaacgtaccattaaggatgaaggtttc 586
|| | || ||||| ||||||| |||||||| || || ||||||||||||||| |
Sbjct: 492 tctcacccatacaaaggtattgcggactgctttggccgcacaattaaggatgaaggtgtg 551
Query: 587 tcttccttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttg 646
| | ||||||| || |||||||||||||| || |||||||| ||||| ||||| |||
Sbjct: 552 attgcactgtggagagggaacactgctaatgtcatccgttactttcctacccaggccttg 611
Query: 647 aactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggc 706
|||||||| || || ||| | |||||| | |||||||||| |||||||| | ||||||
Sbjct: 612 aactttgccttcaaagaccatttcaagcgcatgttcaactttaagaaggacaaggatggt 671
Query: 707 tattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttg 766
|| ||||||||||||||||| |||||||| ||||| || ||||||||||||| |||| |
Sbjct: 672 tactggaagtggtttgctggaaacctggcttctggaggagctgctggtgcttgctctctc 731
Query: 767 ttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgcc 826
|| |||||||| || ||||| || || | || | ||||||||||||| ||||||||
Sbjct: 732 ttctttgtgtattctctggattatgctcgtactcgtctggctaatgatgccaaggctgca 791
Query: 827 aagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaag 886
||| || |||| ||||| |||||||| ||||| ||||| ||||||||||| || |
Sbjct: 792 aagaagggtggtgggaggcaattcaatggacttgttgatgtttaccgcaagacccttgcg 851
Query: 887 tctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaatcattgtt 946
||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 852 tctgatggtattgctggtctgtaccgtggattcaacatctcctgtgttggtatcattgtc 911
Query: 947 tatcgtggtctgtactttgggctctatgattccatcaagccagttgtccttactggcaac 1006
|||||||| ||||||||||| | |||||||| |||||||||| || ||| |||||||
Sbjct: 912 tatcgtgggctgtactttggaatgtatgattctctcaagccagtcgttcttgttggcaac 971
Query: 1007 ctccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggt 1066
|| ||||| || ||| ||||||| ||| || |||||| || || | |||||||||
Sbjct: 972 cttcaggataacttccttgccagcttcttacttggttggggcattaccattggtgctggc 1031
Query: 1067 cttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggct 1126
||||| || ||||| ||||| || || || | ||||||||||||||||||||||||||
Sbjct: 1032 cttgcttcatacccaatcgacactgttcgtcgtcggatgatgatgacatctggtgaggct 1091
Query: 1127 gtcaagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaag 1186
||||||||||| ||||||||||| |||||| |||||||| || |||||| || | |||
Sbjct: 1092 gtcaagtacaacagctccttggatgcgttcaagcagattgttgcgaaggagggtgcgaag 1151
Query: 1187 tccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctt 1246
|| || |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1152 tcactcttcaagggcgctggtgctaacattctgcgtgctgttgctggtgctggtgtgctt 1211
Query: 1247 tctggctatgaccagctccagatcctcttcttcggaaagaagtacgg 1293
|||| |||||| |||| ||| | || |||| || |||||||||||
Sbjct: 1212 gctggatatgacaagctgcaggtggtcgtctttggtaagaagtacgg 1258
>dbj|AK103134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D07, full
insert sequence
Length = 1606
Score = 490 bits (247), Expect = e-135
Identities = 727/887 (81%)
Strand = Plus / Plus
Query: 407 atgattgatttcatgatgggcggtgtttcagctgctgtttcaaagactgctgctgctccc 466
|||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 375 atgattgacttcatgatgggtggagtttcagctgctgtctccaagactgctgctgctccc 434
Query: 467 atcgagcgtgtgaagctgcttattcagaaccaagatgagatgattaagtctggtaggcta 526
|| ||||| | ||||| || ||||| ||||| ||||| ||||| ||| |||||||||
Sbjct: 435 attgagcgaatcaagcttctcattcaaaaccaggatgaaatgatcaagagtggtaggctc 494
Query: 527 tcagagccgtacaagggtattgttgactgcttcaaacgtaccattaaggatgaaggtttc 586
|| | || ||||| ||||||| |||||||| || || ||||||||||||||| |
Sbjct: 495 tctcacccatacaaaggtattgcggactgctttggccgcacaattaaggatgaaggtgtg 554
Query: 587 tcttccttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttg 646
| | ||||||| || |||||||||||||| || |||||||| ||||| ||||| |||
Sbjct: 555 attgcactgtggagagggaacactgctaatgtcatccgttactttcctacccaggccttg 614
Query: 647 aactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggc 706
|||||||| || || ||| | |||||| | |||||||||| |||||||| | ||||||
Sbjct: 615 aactttgccttcaaagaccatttcaagcgcatgttcaactttaagaaggacaaggatggt 674
Query: 707 tattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttg 766
|| ||||||||||||||||| |||||||| ||||| || ||||||||||||| |||| |
Sbjct: 675 tactggaagtggtttgctggaaacctggcttctggaggagctgctggtgcttgctctctc 734
Query: 767 ttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgcc 826
|| |||||||| || ||||| || || | || | ||||||||||||| ||||||||
Sbjct: 735 ttgtttgtgtattctctggattatgctcgtactcgtctggctaatgatgccaaggctgca 794
Query: 827 aagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaag 886
||| || |||| ||||| |||||||| ||||| ||||| ||||||||||| || |
Sbjct: 795 aagaagggtggtgggaggcaattcaatggacttgttgatgtttaccgcaagacccttgcg 854
Query: 887 tctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaatcattgtt 946
||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 855 tctgatggtattgctggtctgtaccgtggattcaacatctcctgtgttggtatcattgtc 914
Query: 947 tatcgtggtctgtactttgggctctatgattccatcaagccagttgtccttactggcaac 1006
|||||||| ||||||||||| | |||||||| |||||||||| || ||| |||||||
Sbjct: 915 tatcgtgggctgtactttggaatgtatgattctctcaagccagtcgttcttgttggcaac 974
Query: 1007 ctccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggt 1066
|| ||||| || ||| ||||||| ||| || |||||| || || | |||||||||
Sbjct: 975 cttcaggataacttccttgccagcttcttacttggttggggcattaccattggtgctggc 1034
Query: 1067 cttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggct 1126
||||| || ||||| ||||| || || || | ||||||||||||||||||||||||||
Sbjct: 1035 cttgcttcatacccaatcgacactgttcgtcgtcggatgatgatgacatctggtgaggct 1094
Query: 1127 gtcaagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaag 1186
||||||||||| ||||||||||| |||||| |||||||| || |||||| || | |||
Sbjct: 1095 gtcaagtacaacagctccttggatgcgttcaagcagattgttgcgaaggagggtgcgaag 1154
Query: 1187 tccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctt 1246
|| || |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1155 tcactcttcaagggcgctggtgctaacattctgcgtgctgttgctggtgctggtgtgctt 1214
Query: 1247 tctggctatgaccagctccagatcctcttcttcggaaagaagtacgg 1293
|||| |||||| |||| ||| | || |||| || |||||||||||
Sbjct: 1215 gctggatatgacaagctgcaggtggtcgtctttggtaagaagtacgg 1261
>dbj|AK103615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K22, full
insert sequence
Length = 1559
Score = 490 bits (247), Expect = e-135
Identities = 727/887 (81%)
Strand = Plus / Plus
Query: 407 atgattgatttcatgatgggcggtgtttcagctgctgtttcaaagactgctgctgctccc 466
|||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 379 atgattgacttcatgatgggtggagtttcagctgctgtctccaagactgctgctgctccc 438
Query: 467 atcgagcgtgtgaagctgcttattcagaaccaagatgagatgattaagtctggtaggcta 526
|| ||||| | ||||| || ||||| ||||| ||||| ||||| ||| |||||||||
Sbjct: 439 attgagcgaatcaagcttctcattcaaaaccaggatgaaatgatcaagagtggtaggctc 498
Query: 527 tcagagccgtacaagggtattgttgactgcttcaaacgtaccattaaggatgaaggtttc 586
|| | || ||||| ||||||| |||||||| || || ||||||||||||||| |
Sbjct: 499 tctcacccatacaaaggtattgcggactgctttggccgcacaattaaggatgaaggtgtg 558
Query: 587 tcttccttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttg 646
| | ||||||| || |||||||||||||| || |||||||| ||||| ||||| |||
Sbjct: 559 attgcactgtggagagggaacactgctaatgtcatccgttactttcctacccaggccttg 618
Query: 647 aactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggc 706
|||||||| || || ||| | |||||| | |||||||||| |||||||| | ||||||
Sbjct: 619 aactttgccttcaaagaccatttcaagcgcatgttcaactttaagaaggacaaggatggt 678
Query: 707 tattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttg 766
|| ||||||||||||||||| |||||||| ||||| || ||||||||||||| |||| |
Sbjct: 679 tactggaagtggtttgctggaaacctggcttctggaggagctgctggtgcttgctctctc 738
Query: 767 ttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgcc 826
|| |||||||| || ||||| || || | || | ||||||||||||| ||||||||
Sbjct: 739 ttgtttgtgtattctctggattatgctcgtactcgtctggctaatgatgccaaggctgca 798
Query: 827 aagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaag 886
||| || |||| ||||| |||||||| ||||| ||||| ||||||||||| || |
Sbjct: 799 aagaagggtggtgggaggcaattcaatggacttgttgatgtttaccgcaagacccttgcg 858
Query: 887 tctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaatcattgtt 946
||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 859 tctgatggtattgctggtctgtaccgtggattcaacatctcctgtgttggtatcattgtc 918
Query: 947 tatcgtggtctgtactttgggctctatgattccatcaagccagttgtccttactggcaac 1006
|||||||| ||||||||||| | |||||||| |||||||||| || ||| |||||||
Sbjct: 919 tatcgtgggctgtactttggaatgtatgattctctcaagccagtcgttcttgttggcaac 978
Query: 1007 ctccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggt 1066
|| ||||| || ||| ||||||| ||| || |||||| || || | |||||||||
Sbjct: 979 cttcaggataacttccttgccagcttcttacttggttggggcattaccattggtgctggc 1038
Query: 1067 cttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggct 1126
||||| || ||||| ||||| || || || | ||||||||||||||||||||||||||
Sbjct: 1039 cttgcttcatacccaatcgacactgttcgtcgtcggatgatgatgacatctggtgaggct 1098
Query: 1127 gtcaagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaag 1186
||||||||||| ||||||||||| |||||| |||||||| || |||||| || | |||
Sbjct: 1099 gtcaagtacaacagctccttggatgcgttcaagcagattgttgcgaaggagggtgcgaag 1158
Query: 1187 tccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctt 1246
|| || |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1159 tcactcttcaagggcgctggtgctaacattctgcgtgctgttgctggtgctggtgtgctt 1218
Query: 1247 tctggctatgaccagctccagatcctcttcttcggaaagaagtacgg 1293
|||| |||||| |||| ||| | || |||| || |||||||||||
Sbjct: 1219 gctggatatgacaagctgcaggtggtcgtctttggtaagaagtacgg 1265
>gb|CB682360.1|CB682360 OSJNEf09J13.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09J13 5', mRNA sequence
Length = 755
Score = 448 bits (226), Expect = e-123
Identities = 391/446 (87%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 310 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 369
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 370 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 429
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 430 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 489
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 490 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 549
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 550 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 609
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 610 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 669
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 670 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 729
Query: 790 cgcgagaacaaggttggctaatgatg 815
|| || ||||||||||| |||||||
Sbjct: 730 tgctaggacaaggttggccaatgatg 755
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 101 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 160
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 161 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 220
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 221 gacaggcgctttaccacaaggagctacatgacccagggcctt 262
>gb|CB683212.1|CB683212 OSJNEf11E21.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11E21 5', mRNA sequence
Length = 770
Score = 442 bits (223), Expect = e-121
Identities = 390/446 (87%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 325 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 384
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 385 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 444
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 445 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 504
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 505 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 564
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 565 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 624
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 625 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 684
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 685 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 744
Query: 790 cgcgagaacaaggttggctaatgatg 815
|| | ||||||||||| |||||||
Sbjct: 745 tgctangacaaggttggccaatgatg 770
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 116 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 175
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 176 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 235
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 236 gacaggcgctttaccacaaggagctacatgacccagggcctt 277
>gb|CB685073.1|CB685073 OSJNEf15D07.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15D07 5', mRNA sequence
Length = 746
Score = 428 bits (216), Expect = e-117
Identities = 369/420 (87%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 323 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 382
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 383 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 442
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 443 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 502
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 503 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 562
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 563 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 622
Query: 670 caagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaa 729
||||||| |||||||||||||||| || | |||||| || ||||||||||||| ||||||
Sbjct: 623 caagaggctgttcaacttcaagaaagacaaggatggttactggaagtggtttggtggcaa 682
Query: 730 cctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggacta 789
||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 683 ccttgcctctggtggtgctgctggtgcttcatctctgttttttgtgtactcccttgacta 742
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 114 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 173
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 174 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 233
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 234 gacaggcgctttaccacaaggagctacatgacccagggcctt 275
>gb|AACV01005297.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005297, whole
genome shotgun sequence
Length = 63269
Score = 428 bits (216), Expect = e-117
Identities = 327/364 (89%)
Strand = Plus / Minus
Query: 639 aggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggata 698
|||||||||||||||| || ||||| |||||||||||| |||||||||||||||| || |
Sbjct: 8416 aggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaagaaagaca 8357
Query: 699 gggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgctt 758
|||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 8356 aggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgctt 8297
Query: 759 cctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcga 818
| ||| ||||||||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 8296 catctctgttttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcga 8237
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 8236 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 8177
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 8176 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 8117
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 8116 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 8057
Query: 999 ctgg 1002
||||
Sbjct: 8056 ctgg 8053
Score = 323 bits (163), Expect = 2e-085
Identities = 289/327 (88%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 1010 caggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtctt 1069
||||||||||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct: 7963 caggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtctt 7904
Query: 1070 gcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtc 1129
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 7903 gcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgtc 7844
Query: 1130 aagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtcc 1189
||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 7843 aagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtca 7784
Query: 1190 ctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttct 1249
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 7783 ctgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctca 7724
Query: 1250 ggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgcttaa 1309
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 7723 ggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcctaa 7664
Query: 1310 a-tgg-agaaatatgatgacgaacaag 1334
| ||| ||||| |||||||||||||||
Sbjct: 7663 actggcagaaa-atgatgacgaacaag 7638
Score = 246 bits (124), Expect = 3e-062
Identities = 229/264 (86%)
Strand = Plus / Minus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 8963 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 8904
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 8903 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 8844
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 8843 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 8784
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 8783 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 8724
Query: 610 tgctaatgttattcgttacttccc 633
||| ||||| || |||||||||||
Sbjct: 8723 tgccaatgtgatccgttacttccc 8700
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Minus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 9172 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 9113
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 9112 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 9053
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 9052 gacaggcgctttaccacaaggagctacatgacccagggcctt 9011
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 428 bits (216), Expect = e-117
Identities = 327/364 (89%)
Strand = Plus / Plus
Query: 639 aggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggata 698
|||||||||||||||| || ||||| |||||||||||| |||||||||||||||| || |
Sbjct: 5007556 aggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaagaaagaca 5007615
Query: 699 gggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgctt 758
|||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 5007616 aggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgctt 5007675
Query: 759 cctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcga 818
| ||| ||||||||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 5007676 catctctgttttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcga 5007735
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 5007736 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 5007795
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 5007796 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 5007855
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 5007856 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 5007915
Query: 999 ctgg 1002
||||
Sbjct: 5007916 ctgg 5007919
Score = 323 bits (163), Expect = 2e-085
Identities = 289/327 (88%), Gaps = 3/327 (0%)
Strand = Plus / Plus
Query: 1010 caggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtctt 1069
||||||||||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct: 5008009 caggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtctt 5008068
Query: 1070 gcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtc 1129
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 5008069 gcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgtc 5008128
Query: 1130 aagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtcc 1189
||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 5008129 aagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtca 5008188
Query: 1190 ctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttct 1249
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 5008189 ctgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctca 5008248
Query: 1250 ggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgcttaa 1309
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 5008249 ggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcctaa 5008308
Query: 1310 a-tgg-agaaatatgatgacgaacaag 1334
| ||| ||||| |||||||||||||||
Sbjct: 5008309 actggcagaaa-atgatgacgaacaag 5008334
Score = 246 bits (124), Expect = 3e-062
Identities = 229/264 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 5007009 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 5007068
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 5007069 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 5007128
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 5007129 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 5007188
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 5007189 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 5007248
Query: 610 tgctaatgttattcgttacttccc 633
||| ||||| || |||||||||||
Sbjct: 5007249 tgccaatgtgatccgttacttccc 5007272
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 5006800 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 5006859
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 5006860 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 5006919
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 5006920 gacaggcgctttaccacaaggagctacatgacccagggcctt 5006961
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ2056_H01
Length = 123428
Score = 428 bits (216), Expect = e-117
Identities = 327/364 (89%)
Strand = Plus / Plus
Query: 639 aggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggata 698
|||||||||||||||| || ||||| |||||||||||| |||||||||||||||| || |
Sbjct: 98902 aggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaagaaagaca 98961
Query: 699 gggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgctt 758
|||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 98962 aggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgctt 99021
Query: 759 cctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcga 818
| ||| ||||||||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 99022 catctctgttttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcga 99081
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 99082 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 99141
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 99142 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 99201
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 99202 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 99261
Query: 999 ctgg 1002
||||
Sbjct: 99262 ctgg 99265
Score = 323 bits (163), Expect = 2e-085
Identities = 289/327 (88%), Gaps = 3/327 (0%)
Strand = Plus / Plus
Query: 1010 caggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtctt 1069
||||||||||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct: 99355 caggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtctt 99414
Query: 1070 gcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtc 1129
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 99415 gcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgtc 99474
Query: 1130 aagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtcc 1189
||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 99475 aagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtca 99534
Query: 1190 ctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttct 1249
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 99535 ctgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctca 99594
Query: 1250 ggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgcttaa 1309
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 99595 ggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcctaa 99654
Query: 1310 a-tgg-agaaatatgatgacgaacaag 1334
| ||| ||||| |||||||||||||||
Sbjct: 99655 actggcagaaa-atgatgacgaacaag 99680
Score = 246 bits (124), Expect = 3e-062
Identities = 229/264 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 98355 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 98414
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 98415 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 98474
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 98475 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 98534
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 98535 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 98594
Query: 610 tgctaatgttattcgttacttccc 633
||| ||||| || |||||||||||
Sbjct: 98595 tgccaatgtgatccgttacttccc 98618
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 98146 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 98205
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 98206 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 98265
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 98266 gacaggcgctttaccacaaggagctacatgacccagggcctt 98307
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 428 bits (216), Expect = e-117
Identities = 327/364 (89%)
Strand = Plus / Plus
Query: 639 aggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggata 698
|||||||||||||||| || ||||| |||||||||||| |||||||||||||||| || |
Sbjct: 16320614 aggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaagaaagaca 16320673
Query: 699 gggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgctt 758
|||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 16320674 aggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgctt 16320733
Query: 759 cctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcga 818
| ||| ||||||||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 16320734 catctctgttttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcga 16320793
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 16320794 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 16320853
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 16320854 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 16320913
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 16320914 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 16320973
Query: 999 ctgg 1002
||||
Sbjct: 16320974 ctgg 16320977
Score = 323 bits (163), Expect = 2e-085
Identities = 289/327 (88%), Gaps = 3/327 (0%)
Strand = Plus / Plus
Query: 1010 caggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtctt 1069
||||||||||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct: 16321067 caggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtctt 16321126
Query: 1070 gcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtc 1129
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 16321127 gcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgtc 16321186
Query: 1130 aagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtcc 1189
||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 16321187 aagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtca 16321246
Query: 1190 ctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttct 1249
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 16321247 ctgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctca 16321306
Query: 1250 ggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgcttaa 1309
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 16321307 ggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcctaa 16321366
Query: 1310 a-tgg-agaaatatgatgacgaacaag 1334
| ||| ||||| |||||||||||||||
Sbjct: 16321367 actggcagaaa-atgatgacgaacaag 16321392
Score = 246 bits (124), Expect = 3e-062
Identities = 229/264 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 16320067 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 16320126
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 16320127 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 16320186
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 16320187 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 16320246
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 16320247 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 16320306
Query: 610 tgctaatgttattcgttacttccc 633
||| ||||| || |||||||||||
Sbjct: 16320307 tgccaatgtgatccgttacttccc 16320330
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 16319858 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 16319917
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 16319918 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 16319977
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 16319978 gacaggcgctttaccacaaggagctacatgacccagggcctt 16320019
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 428 bits (216), Expect = e-117
Identities = 327/364 (89%)
Strand = Plus / Plus
Query: 639 aggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggata 698
|||||||||||||||| || ||||| |||||||||||| |||||||||||||||| || |
Sbjct: 29773678 aggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaagaaagaca 29773737
Query: 699 gggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgctt 758
|||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 29773738 aggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgctt 29773797
Query: 759 cctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcga 818
| ||| ||||||||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 29773798 catctctgttttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcga 29773857
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 29773858 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 29773917
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 29773918 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 29773977
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 29773978 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 29774037
Query: 999 ctgg 1002
||||
Sbjct: 29774038 ctgg 29774041
Score = 323 bits (163), Expect = 2e-085
Identities = 289/327 (88%), Gaps = 3/327 (0%)
Strand = Plus / Plus
Query: 1010 caggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtctt 1069
||||||||||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct: 29774131 caggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtctt 29774190
Query: 1070 gcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtc 1129
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 29774191 gcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgtc 29774250
Query: 1130 aagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtcc 1189
||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 29774251 aagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtca 29774310
Query: 1190 ctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttct 1249
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 29774311 ctgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctca 29774370
Query: 1250 ggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgcttaa 1309
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 29774371 ggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcctaa 29774430
Query: 1310 a-tgg-agaaatatgatgacgaacaag 1334
| ||| ||||| |||||||||||||||
Sbjct: 29774431 actggcagaaa-atgatgacgaacaag 29774456
Score = 246 bits (124), Expect = 3e-062
Identities = 229/264 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 29773131 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 29773190
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 29773191 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 29773250
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 29773251 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 29773310
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 29773311 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 29773370
Query: 610 tgctaatgttattcgttacttccc 633
||| ||||| || |||||||||||
Sbjct: 29773371 tgccaatgtgatccgttacttccc 29773394
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 29772922 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 29772981
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 29772982 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 29773041
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 29773042 gacaggcgctttaccacaaggagctacatgacccagggcctt 29773083
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 428 bits (216), Expect = e-117
Identities = 327/364 (89%)
Strand = Plus / Plus
Query: 639 aggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaaggata 698
|||||||||||||||| || ||||| |||||||||||| |||||||||||||||| || |
Sbjct: 29842557 aggctttgaactttgctttcaaggattacttcaagaggctgttcaacttcaagaaagaca 29842616
Query: 699 gggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtgctt 758
|||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 29842617 aggatggttactggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgctt 29842676
Query: 759 cctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcga 818
| ||| ||||||||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 29842677 catctctgttttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcga 29842736
Query: 819 aggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaaga 878
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 29842737 aggctgccaagggaggaggtgaaaggcagttcaatggccttgtggatgtttaccgcaaga 29842796
Query: 879 cactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaa 938
| |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 29842797 ctctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaa 29842856
Query: 939 tcattgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtcctta 998
||||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |
Sbjct: 29842857 tcattgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactca 29842916
Query: 999 ctgg 1002
||||
Sbjct: 29842917 ctgg 29842920
Score = 323 bits (163), Expect = 2e-085
Identities = 289/327 (88%), Gaps = 3/327 (0%)
Strand = Plus / Plus
Query: 1010 caggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtctt 1069
||||||||||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct: 29843010 caggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggtgcaggtctt 29843069
Query: 1070 gcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtc 1129
|| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 29843070 gcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgtc 29843129
Query: 1130 aagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtcc 1189
||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 29843130 aagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtca 29843189
Query: 1190 ctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttct 1249
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 29843190 ctgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctca 29843249
Query: 1250 ggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgcttaa 1309
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 29843250 ggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgcctaa 29843309
Query: 1310 a-tgg-agaaatatgatgacgaacaag 1334
| ||| ||||| |||||||||||||||
Sbjct: 29843310 actggcagaaa-atgatgacgaacaag 29843335
Score = 246 bits (124), Expect = 3e-062
Identities = 229/264 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 29842010 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 29842069
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 29842070 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 29842129
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 29842130 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 29842189
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 29842190 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 29842249
Query: 610 tgctaatgttattcgttacttccc 633
||| ||||| || |||||||||||
Sbjct: 29842250 tgccaatgtgatccgttacttccc 29842273
Score = 147 bits (74), Expect = 2e-032
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 29841801 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 29841860
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| ||||||||||||||||| |||
Sbjct: 29841861 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctat 29841920
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 29841921 gacaggcgctttaccacaaggagctacatgacccagggcctt 29841962
>gb|CA998048.1|CA998048 ERDCA_G03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 561
Score = 385 bits (194), Expect = e-104
Identities = 365/418 (87%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 919 taacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgattc 978
||||||||| ||||||||||||||||| || ||||||||||||||||| | ||||||||
Sbjct: 7 taacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaatgtatgattc 66
Query: 979 catcaagccagttgtccttactggcaacctccaggacaatttctttgccagtttcgctct 1038
| ||||||||||| || ||||| |||||||||||||||||||| || || || ||
Sbjct: 67 tctgaagccagttgtactcactgggtctctccaggacaatttctttgcaagctttgccct 126
Query: 1039 gggttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcag 1098
|| ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 127 tgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcag 186
Query: 1099 aaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttcca 1158
||||||||||||||| ||||| |||||||||||||||||||||||| |||| || |||
Sbjct: 187 aaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttctc 246
Query: 1159 gcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattct 1218
||||| || ||||| || || ||||||| |||||||||||||||||||| ||||| ||
Sbjct: 247 ccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcct 306
Query: 1219 tcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttctt 1278
|||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 307 acgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttctt 366
Query: 1279 cggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 367 tggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 423
>gb|CA998066.1|CA998066 ERDCA_H02 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 500
Score = 385 bits (194), Expect = e-104
Identities = 365/418 (87%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 919 taacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgattc 978
||||||||| ||||||||||||||||| || ||||||||||||||||| | ||||||||
Sbjct: 12 taacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaatgtatgattc 71
Query: 979 catcaagccagttgtccttactggcaacctccaggacaatttctttgccagtttcgctct 1038
| ||||||||||| || ||||| |||||||||||||||||||| || || || ||
Sbjct: 72 tctgaagccagttgtactcactgggtctctccaggacaatttctttgcaagctttgccct 131
Query: 1039 gggttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcag 1098
|| ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 132 tgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcag 191
Query: 1099 aaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttcca 1158
||||||||||||||| ||||| |||||||||||||||||||||||| |||| || |||
Sbjct: 192 aaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttctc 251
Query: 1159 gcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattct 1218
||||| || ||||| || || ||||||| |||||||||||||||||||| ||||| ||
Sbjct: 252 ccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcct 311
Query: 1219 tcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttctt 1278
|||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 312 acgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttctt 371
Query: 1279 cggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 372 tggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 428
>gb|AU108585.1|AU108585 AU108585 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12463, mRNA sequence
Length = 714
Score = 377 bits (190), Expect = e-101
Identities = 364/419 (86%), Gaps = 3/419 (0%)
Strand = Plus / Plus
Query: 918 ttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgatt 977
|||||||| | |||||||||| |||||| || ||||||||||||||||| | |||||||
Sbjct: 1 ttaacatcncatgtgttggaancattgtctaccgtggtctgtactttggaatgtatgatt 60
Query: 978 ccatcaagccagttgtccttactggcaacctccaggacaatttctttgccagtttcgctc 1037
| | ||||||||||| || ||||| |||||||||||||||||||| || || || |
Sbjct: 61 ctctgaagccagttgtactcactggntctctccaggacaatttctttgcaagctttgccc 120
Query: 1038 tgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgca 1097
| || ||||||||||| || ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 121 ttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgca 180
Query: 1098 gaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttcc 1157
|||||||||||||||| ||||| |||||||||||||||||||||||| |||| || |||
Sbjct: 181 gaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttct 240
Query: 1158 agcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattc 1217
||||| || ||||| || || ||||||| |||||||||||||||||||| ||||| |
Sbjct: 241 cccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcc 300
Query: 1218 ttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttct 1277
| |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 301 tacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttct 360
Query: 1278 tcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
| ||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 361 ttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 418
>gb|C73690.1|C73690 C73690 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20158_1A, mRNA sequence
Length = 455
Score = 369 bits (186), Expect = 3e-099
Identities = 363/418 (86%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 881 ctcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttggaatc 940
|||||||| ||||| ||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 1 ctcaagtcagatggcattgctgggttgtaccgtggatttaacatctcatgtgttggaatc 60
Query: 941 attgtttatcgtggtctgtactttgggctctatgattccatcaagccagttgtccttact 1000
||||| || ||||||||||||||||| | |||||||| | ||||||||||| || |||
Sbjct: 61 attgtctaccgtggtctgtactttggaatgtatgattctctgaagccagttgtactcact 120
Query: 1001 ggcaacctccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggt 1060
|| |||||||||||||||||||| || || || || || ||||||||||| || |||
Sbjct: 121 gggtctctccaggacaatttctttgcaagctttgcccttgggtggctgatcaccaacggt 180
Query: 1061 gctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggt 1120
|| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 181 gcaggtcttgcctcttaccccattgataccgtccgcagaaggatgatgatgacctctgga 240
Query: 1121 gaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaaggaaggg 1180
|||||||||||||||||||||||| |||| || ||| ||||| || ||||| || ||
Sbjct: 241 gaggctgtcaagtacaagagctccatggatgctttctcccagatcctgaagaacgagggt 300
Query: 1181 cccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgc-tggtgctgg 1239
||||||| |||||||||||||||||||| ||||| || ||||||||||| |||||||||
Sbjct: 301 gccaagtcactgttcaagggtgctggtgccaacatcctacgtgccattgcttggtgctgg 360
Query: 1240 tgtgctttctggct-atgaccagctccagatcctcttc-ttcggaaagaagtacggct 1295
|||||| || |||| |||||||||| |||||||||||| || ||||||||||||||||
Sbjct: 361 tgtgctctcaggctaatgaccagctgcagatcctcttcttttggaaagaagtacggct 418
>gb|D49042.2|D49042 RICS15662A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 456
Score = 327 bits (165), Expect = 1e-086
Identities = 315/365 (86%)
Strand = Plus / Plus
Query: 851 aatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggctttac 910
||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||| | |||
Sbjct: 1 aatggccttgtggatgtttaccgcaagactctcaagtcagatggcattgctgggttgtac 60
Query: 911 cgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgggctc 970
||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 61 cgtggatttaacatctcatgtgttggaatcattgtctaccgtggtctgtactttggaatg 120
Query: 971 tatgattccatcaagccagttgtccttactggcaacctccaggacaatttctttgccagt 1030
|||||||| | ||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 121 tatgattctctgaagccagttgtactcactgggtctctccaggacaatttctttgcaagc 180
Query: 1031 ttcgctctgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgatacc 1090
|| || || || ||||||||||| || ||||| |||||||| ||||||||||| ||||||
Sbjct: 181 tttgcccttgggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgatacc 240
Query: 1091 gtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggac 1150
||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 241 gtccgcagaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggat 300
Query: 1151 gcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgct 1210
|| ||| ||||| || ||||| || || ||||||| ||||||||||||||||||||
Sbjct: 301 gctttctcccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgcc 360
Query: 1211 aacat 1215
|||||
Sbjct: 361 aacat 365
>gb|D25150.1|D25150 RICR3368A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3368_1A, mRNA sequence
Length = 274
Score = 325 bits (164), Expect = 4e-086
Identities = 242/268 (90%)
Strand = Plus / Plus
Query: 588 cttccttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttga 647
|||| |||||||| || |||||||| ||||| || ||||||||||| || ||||||||||
Sbjct: 7 cttcattgtggagaggaaacactgccaatgtgatccgttacttccccacccaggctttga 66
Query: 648 actttgcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggct 707
||||||| || ||||| |||||||||||| |||||||||||||||| || | |||||| |
Sbjct: 67 actttgctttcaaggattacttcaagaggctgttcaacttcaagaaagacaaggatggtt 126
Query: 708 attggaagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgt 767
| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||
Sbjct: 127 actggaagtggtttggtggcaaccttgcctctggtggtgctgctggtgcttcatctctgt 186
Query: 768 tttttgtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgcca 827
|||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||||
Sbjct: 187 tttttgtgtactcccttgactatgctaggacaaggttggccaatgatgcgaaggctgcca 246
Query: 828 agggaggaggtgaaaggcagttcaatgg 855
||||||||||||||||||||||||||||
Sbjct: 247 agggaggaggtgaaaggcagttcaatgg 274
>gb|CB674992.1|CB674992 OSJNEe10G10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10G10 3', mRNA sequence
Length = 820
Score = 323 bits (163), Expect = 2e-085
Identities = 469/571 (82%)
Strand = Plus / Minus
Query: 723 ctggcaacctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccc 782
|||| |||||||| ||||| || ||||||||||||| |||| | || |||||||| || |
Sbjct: 820 ctggaaacctggcttctggaggagctgctggtgcttgctctctcttctttgtgtattctc 761
Query: 783 tggactacgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaa 842
|||| || || | || | ||||||||||||| |||||||| ||| || |||| |
Sbjct: 760 tggattatgctcgtactcgtctggctaatgatgccaaggctgcaaagaagggtggtggga 701
Query: 843 ggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctg 902
|||| |||||||| ||||| ||||| ||||||||||| || |||||||||||||||||
Sbjct: 700 ggcaattcaatggacttgttgatgtttaccgcaagacccttgcgtctgatggtattgctg 641
Query: 903 ggctttaccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtact 962
| || ||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 640 gtctgtaccgtggattcaacatctcctgtgttggtatcattgtctatcgtgggctgtact 581
Query: 963 ttgggctctatgattccatcaagccagttgtccttactggcaacctccaggacaatttct 1022
|||| | |||||||| |||||||||| || ||| ||||||||| ||||| || |||
Sbjct: 580 ttggaatgtatgattctctcaagccagtcgttcttgttggcaaccttcaggataacttcc 521
Query: 1023 ttgccagtttcgctctgggttggctgatcactaatggtgctggtcttgcatcttacccca 1082
||||||| ||| || |||||| || || | ||||||||| ||||| || ||||| |
Sbjct: 520 ttgccagcttcttacttggttggggcattaccattggtgctggccttgcttcatacccaa 461
Query: 1083 tcgataccgtccgcagaaggatgatgatgacatctggtgaggctgtcaagtacaagagct 1142
|||| || || || | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 460 tcgacactgttcgtcgtcggatgatgatgacatctggtgaggctgtcaagtacaacagct 401
Query: 1143 ccttggacgcgttccagcagattcttaagaaggaagggcccaagtccctgttcaagggtg 1202
||||||| |||||| |||||||| || |||||| || | ||||| || |||||||| |
Sbjct: 400 ccttggatgcgttcaagcagattgttgcgaaggagggtgcgaagtcactcttcaagggcg 341
Query: 1203 ctggtgctaacattcttcgtgccattgctggtgctggtgtgctttctggctatgaccagc 1262
|||||||||||||||| ||||| |||||||||||||||||||| |||| |||||| |||
Sbjct: 340 ctggtgctaacattctgcgtgctgttgctggtgctggtgtgcttgctggatatgacaagc 281
Query: 1263 tccagatcctcttcttcggaaagaagtacgg 1293
| ||| | || |||| || |||||||||||
Sbjct: 280 tgcaggtggtcgtctttggtaagaagtacgg 250
>gb|AU093933.1|AU093933 AU093933 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1354, mRNA sequence
Length = 714
Score = 321 bits (162), Expect = 7e-085
Identities = 358/416 (86%), Gaps = 6/416 (1%)
Strand = Plus / Plus
Query: 924 tctcctgtgttggaatcattgtttatc-gtggtctgtactttgggctctatgattccatc 982
|||| ||||||||||||||||| || | |||||||||||||||| | |||||||| |
Sbjct: 1 tctcatgtgttggaatcattgtctacccgtggtctgtactttggaatgtatgattctctg 60
Query: 983 aagccagttgtcctt-actggcaacctcc-aggacaatttctttgccagtttcgctctgg 1040
||||||||||| || ||||| |||| |||||||||||||||| || || || || |
Sbjct: 61 aagccagttgtactccactgggtctctcccaggacaatttctttgcaagctttgcccttg 120
Query: 1041 gttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaa 1100
| ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct: 121 ggtggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaa 180
Query: 1101 ggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagc 1160
||||||||||||| ||||| |||||||||||||||||||||||| |||| || ||| |
Sbjct: 181 ggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttctccc 240
Query: 1161 agattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttc 1220
|||| || ||||| || || ||||||| |||||||||||||||||||| ||||| || |
Sbjct: 241 agatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcctac 300
Query: 1221 gtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcg 1280
||||||||||||||||||| |||| || |||||||||||||| |||||||||||||| |
Sbjct: 301 gtgccattgctggtgctggnntgctctcaggctatgaccagctgcagatcctcttctttg 360
Query: 1281 gaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
|||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 361 gaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 415
>gb|AU162396.1|AU162396 AU162396 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R1041, mRNA sequence
Length = 715
Score = 319 bits (161), Expect = 3e-084
Identities = 289/328 (88%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 1009 ccaggacaatttctttgccagtttcgctctgggttggctgatcactaatggtgctggtct 1068
|||||||||||||||||| || || || || || || |||||||| || ||||| |||||
Sbjct: 116 ccaggacaatttctttgcaagctttgcccttgggtgnctgatcaccaacggtgcaggtct 175
Query: 1069 tgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggtgaggctgt 1128
||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 176 tgcctcttaccccattgataccgtccgcagaaggatgatgatgacctctggagaggctgt 235
Query: 1129 caagtacaagagctccttggacgcgttccagcagattcttaagaaggaagggcccaagtc 1188
|||||||||||||||| |||| || ||| ||||| || ||||| || || |||||||
Sbjct: 236 caagtacaagagctccatggatgctttctcccagatcctgaagaacgagggtgccaagtc 295
Query: 1189 cctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtgtgctttc 1248
|||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 296 actgttcaagggtgctggtgccaacatcctacgtgccattgctggtgctggtgtgctctc 355
Query: 1249 tggctatgaccagctccagatcctcttcttcggaaagaagtacggctccggcggtgctta 1308
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 356 aggctatgaccagctgcagatcctcttctttggaaagaagtacggctcgggcggtgccta 415
Query: 1309 aa-tgg-agaaatatgatgacgaacaag 1334
|| ||| ||||| |||||||||||||||
Sbjct: 416 aactggcagaaa-atgatgacgaacaag 442
Score = 63.9 bits (32), Expect = 3e-007
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 908 taccgtggatttaacatctcctgtgtt-ggaatcattgtttatcgtggtctgtactttgg 966
|||||||||||||||||||| |||||| |||| |||||| || ||||| |||||||||||
Sbjct: 12 taccgtggatttaacatctcatgtgttgggaaccattgtctaccgtggcctgtactttgg 71
>gb|CB662208.1|CB662208 OSJNEd06A07.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06A07 3', mRNA sequence
Length = 745
Score = 313 bits (158), Expect = 2e-082
Identities = 407/490 (83%)
Strand = Plus / Minus
Query: 804 tggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcg 863
||||||||||||| |||||||| ||| || |||| ||||| |||||||| ||||| |
Sbjct: 727 tggctaatgatgccaaggctgcaaagaagggtggtgggaggcaattcaatggacttgttg 668
Query: 864 atgtctaccgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaaca 923
|||| ||||||||||| || |||||||||||||||||| || ||||||||||| ||||
Sbjct: 667 atgtttaccgcaagacccttgcgtctgatggtattgctggtctgtaccgtggattcaaca 608
Query: 924 tctcctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgattccatca 983
||||||||||||| |||||||| |||||||| ||||||||||| | |||||||| |||
Sbjct: 607 tctcctgtgttggtatcattgtctatcgtgggctgtactttggaatgtatgattctctca 548
Query: 984 agccagttgtccttactggcaacctccaggacaatttctttgccagtttcgctctgggtt 1043
||||||| || ||| ||||||||| ||||| || ||| ||||||| ||| || ||||
Sbjct: 547 agccagtcgttcttgttggcaaccttcaggataacttccttgccagcttcttacttggtt 488
Query: 1044 ggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaagga 1103
|| || || | ||||||||| ||||| || ||||| ||||| || || || | |||
Sbjct: 487 ggggcattaccattggtgctggccttgcttcatacccaatcgacactgttcgtcgtcgga 428
Query: 1104 tgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagcaga 1163
|||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||
Sbjct: 427 tgatgatgacatctggtgaggctgtcaagtacaacagctccttggatgcgttcaagcaga 368
Query: 1164 ttcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttcgtg 1223
|| || |||||| || | ||||| || |||||||| ||||||||||||||||| ||||
Sbjct: 367 ttgttgcgaaggagggtgcgaagtcactcttcaagggcgctggtgctaacattctgcgtg 308
Query: 1224 ccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcggaa 1283
| |||||||||||||||||||| |||| |||||| |||| ||| | || |||| || |
Sbjct: 307 ctgttgctggtgctggtgtgcttgctggatatgacaagctgcaggtggtcgtctttggta 248
Query: 1284 agaagtacgg 1293
||||||||||
Sbjct: 247 agaagtacgg 238
>gb|CF323991.1|CF323991 HDN--05-F05.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-F05, mRNA sequence
Length = 627
Score = 313 bits (158), Expect = 2e-082
Identities = 368/428 (85%), Gaps = 10/428 (2%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 197 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 256
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 257 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 316
Query: 490 tcagaaccaagatgagatgattaa-gtctggtaggctatcagagccgtacaaggg-tatt 547
|||||||| ||||| ||||| || | |||||||||| |||||||| |||||||| ||||
Sbjct: 317 ccagaaccaggatgaaatgatcaagggctggtaggctctcagagccatacaagggntatt 376
Query: 548 gttgactgcttcaaacgtaccattaaggatga-aggtttctcttccttgtggaggggtaa 606
| ||||||||| ||| || || || ||||| ||||| |||| |||||||| || ||
Sbjct: 377 ggggactgcttcggacgcactatcaa-gatgaggggttttgcttcattgtggagaggaaa 435
Query: 607 cactgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggacta 666
|||||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| ||
Sbjct: 436 cactgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggatta 495
Query: 667 cttcaagaggttgttcaacttcaagaaggatagggatggctattggaagtgg--tttgct 724
|||||||||| |||||||||||||||| || | |||||| || ||||||||| |||| |
Sbjct: 496 cttcaagaggctgttcaacttcaagaaagacaaggatgg-tactggaagtggtttttggt 554
Query: 725 ggcaacctggcctct--ggtggtgctgctggtgcttcctctttg-ttttttgtgtactcc 781
|||||||| |||||| |||||||||||||||||||| ||| || |||||||||||||||
Sbjct: 555 ggcaaccttgcctctggggtggtgctgctggtgcttcatctctgtttttttgtgtactcc 614
Query: 782 ctggacta 789
|| |||||
Sbjct: 615 cttgacta 622
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 170 actgtccttcataagctcggtggccagttccacctgcgctcgatcatctctgaaggtgta 229
||||||||||| ||| ||||||||||||||||||| |||| | | | ||||||||||||
Sbjct: 12 actgtccttcagaagttcggtggccagttccaccttggctccagcttttctgaaggtgta 71
Query: 230 cgggcccgtaacatatgcccatctgtctcatcttatgaaaggagatttgccacaaggaac 289
||||| || ||||| ||||||||||||||||| ||||| ||| | ||| ||||||||| |
Sbjct: 72 cgggctcgcaacatctgcccatctgtctcatcctatgacaggcgctttaccacaaggagc 131
Query: 290 tacatgacccagagcctt 307
|||||||||||| |||||
Sbjct: 132 tacatgacccagggcctt 149
>gb|CB643997.1|CB643997 OSJNEb05A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05A03 3', mRNA sequence
Length = 829
Score = 307 bits (155), Expect = 1e-080
Identities = 404/487 (82%)
Strand = Plus / Minus
Query: 807 ctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatg 866
|||||||||| |||||||| ||| || |||| ||||| |||||||| ||||| ||||
Sbjct: 829 ctaatgatgccaaggctgcaaagaagggtggtgggaggcaattcaatggacttgttgatg 770
Query: 867 tctaccgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatct 926
| ||||||||||| || |||||||||||||||||| || ||||||||||| |||||||
Sbjct: 769 tttaccgcaagacccttgcgtctgatggtattgctggtctgtaccgtggattcaacatct 710
Query: 927 cctgtgttggaatcattgtttatcgtggtctgtactttgggctctatgattccatcaagc 986
|||||||||| |||||||| |||||||| ||||||||||| | |||||||| ||||||
Sbjct: 709 cctgtgttggtatcattgtctatcgtgggctgtactttggaatgtatgattctctcaagc 650
Query: 987 cagttgtccttactggcaacctccaggacaatttctttgccagtttcgctctgggttggc 1046
|||| || ||| ||||||||| ||||| || ||| ||||||| ||| || ||||||
Sbjct: 649 cagtcgttcttgttggcaaccttcaggataacttccttgccagcttcttacttggttggg 590
Query: 1047 tgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatga 1106
|| || | ||||||||| ||||| || ||||| ||||| || || || | ||||||
Sbjct: 589 gcattaccattggtgctggccttgcttcatacccaatcgacactgttcgtcgtcggatga 530
Query: 1107 tgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattc 1166
||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 529 tgatgacatctggtgaggctgtcaagtacaacagctccttggatgcgttcaagcagattg 470
Query: 1167 ttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgcca 1226
|| |||||| || | ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 469 ttgcgaaggagggtgcgaagtcactcttcaagggcgctggtgctaacattctgcgtgctg 410
Query: 1227 ttgctggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcggaaaga 1286
|||||||||||||||||||| |||| |||||| |||| ||| | || |||| || ||||
Sbjct: 409 ttgctggtgctggtgtgcttgctggatatgacaagctgcaggtggtcgtctttggtaaga 350
Query: 1287 agtacgg 1293
|||||||
Sbjct: 349 agtacgg 343
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1008_D06
Length = 112768
Score = 305 bits (154), Expect = 4e-080
Identities = 262/294 (89%), Gaps = 3/294 (1%)
Strand = Plus / Plus
Query: 1043 tggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaagg 1102
||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 8 tggctgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaagg 67
Query: 1103 atgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagcag 1162
||||||||||| ||||| |||||||||||||||||||||||| |||| || ||| |||
Sbjct: 68 atgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttctcccag 127
Query: 1163 attcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttcgt 1222
|| || ||||| || || ||||||| |||||||||||||||||||| ||||| || |||
Sbjct: 128 atcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcctacgt 187
Query: 1223 gccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcgga 1282
||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 188 gccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttctttgga 247
Query: 1283 aagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
|||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 248 aagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 300
>gb|CF323587.1|CF323587 HDN--04-D22.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-D22, mRNA sequence
Length = 505
Score = 303 bits (153), Expect = 2e-079
Identities = 283/325 (87%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 161 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 220
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 221 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 280
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 281 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 340
Query: 550 tgactgcttcaaacgtaccattaaggatga-aggtttctcttccttgtggaggggtaaca 608
||||||||| ||| || || |||||||| ||||| |||| |||||||| || ||||
Sbjct: 341 ggactgcttcggacgcactatcaaggatgaggggttttgcttcattgtggagaggaaaca 400
Query: 609 ctgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactact 668
|||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| ||||
Sbjct: 401 ctgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattact 460
Query: 669 tcaagaggttgttcaacttcaagaa 693
|||||||| ||||||||||||||||
Sbjct: 461 tcaagaggctgttcaacttcaagaa 485
Score = 91.7 bits (46), Expect = 1e-015
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 218 tctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttatgaaaggagattt 277
||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||| | |||
Sbjct: 24 tctgaaggtgtacgggctcgcaacatctgcccatctgtctcatcctatgacaggcgcttt 83
Query: 278 gccacaaggaactacatgacccagagcctt 307
||||||||| || |||||||||| |||||
Sbjct: 84 accacaaggagcttcatgacccagggcctt 113
>gb|C97901.1|C97901 C97901 Rice callus Oryza sativa (japonica cultivar-group) cDNA clone
C0092_12Z, mRNA sequence
Length = 631
Score = 301 bits (152), Expect = 6e-079
Identities = 265/299 (88%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 1038 tgggttggctgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgca 1097
||||| |||||||||| || ||||| |||||| | ||||||||||| |||||||||||||
Sbjct: 38 tgggtgggctgatcaccaacggtgcaggtcttncctcttaccccattgataccgtccgca 97
Query: 1098 gaaggatgatgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttcc 1157
|||||||||||||||| ||||| |||||||||||||||||||||||| |||| || |||
Sbjct: 98 gaaggatgatgatgacctctggagaggctgtcaagtacaagagctccatggatgctttct 157
Query: 1158 agcagattcttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattc 1217
||||| || ||||| || || ||||||| |||||||||||||||||||| ||||| |
Sbjct: 158 cccagatcctgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcc 217
Query: 1218 ttcgtgccattgctggtgctggtgtgctttctggctatgaccagctccagatcctcttct 1277
| |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 218 tacgtgccattgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttct 277
Query: 1278 tcggaaagaagtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
| ||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 278 ttggaaagaagtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 335
>gb|C72484.1|C72484 C72484 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1710_1A, mRNA sequence
Length = 459
Score = 299 bits (151), Expect = 3e-078
Identities = 274/315 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 95 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 154
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 155 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 214
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 215 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 274
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 275 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 334
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 335 tgccaatgtgatccgttacttccccacccaggctttgaactttgctttcaaggattactt 394
Query: 670 caagaggttgttcaa 684
||||||| |||||||
Sbjct: 395 caagaggctgttcaa 409
>gb|CF307391.1|CF307391 HDA1--06-J05.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-J05, mRNA sequence
Length = 596
Score = 297 bits (150), Expect = 1e-077
Identities = 258/290 (88%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1047 tgatcactaatggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatga 1106
||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 596 tgatcaccaacggtgcaggtcttgcctcttaccccattgataccgtccgcagaaggatga 537
Query: 1107 tgatgacatctggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattc 1166
||||||| ||||| |||||||||||||||||||||||| |||| || ||| ||||| |
Sbjct: 536 tgatgacctctggagaggctgtcaagtacaagagctccatggatgctttctcccagatcc 477
Query: 1167 ttaagaaggaagggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgcca 1226
| ||||| || || ||||||| |||||||||||||||||||| ||||| || |||||||
Sbjct: 476 tgaagaacgagggtgccaagtcactgttcaagggtgctggtgccaacatcctacgtgcca 417
Query: 1227 ttgctggtgctggtgtgctttctggctatgaccagctccagatcctcttcttcggaaaga 1286
||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct: 416 ttgctggtgctggtgtgctctcaggctatgaccagctgcagatcctcttctttggaaaga 357
Query: 1287 agtacggctccggcggtgcttaaa-tgg-agaaatatgatgacgaacaag 1334
|||||||||| |||||||| |||| ||| ||||| |||||||||||||||
Sbjct: 356 agtacggctcgggcggtgcctaaactggcagaaa-atgatgacgaacaag 308
>gb|CA997891.1|CA997891 S234B1_G09 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 565
Score = 295 bits (149), Expect = 4e-077
Identities = 274/316 (86%)
Strand = Plus / Plus
Query: 370 tgctaatgctcctgctgagaaaggaggcaagaacttcatgattgatttcatgatgggcgg 429
|||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||| ||
Sbjct: 250 tgctaatgctccagctgagaaaggtggcaaaaacttcatgattgatttcctcatgggtgg 309
Query: 430 tgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgcttat 489
|| ||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 310 agtgtcagccgcagtttcaaagactgctgctgctccgattgagcgtgtgaagctgcttat 369
Query: 490 tcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtattgt 549
|||||||| ||||| ||||| ||| |||||||||| |||||||| |||||||||||||
Sbjct: 370 ccagaaccaggatgaaatgatcaaggctggtaggctctcagagccatacaagggtattgg 429
Query: 550 tgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaacac 609
||||||||| ||| || || |||||||| ||||| |||| |||||||| || |||||
Sbjct: 430 ggactgcttcggacgcactatcaaggatgagggttttgcttcattgtggagaggaaacac 489
Query: 610 tgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactactt 669
||| ||||| || |||||||| || || ||||||||||||||||| || ||||| |||||
Sbjct: 490 tgccaatgtgatccgttacttncccacccaggctttgaactttgctttcaaggattactt 549
Query: 670 caagaggttgttcaac 685
||||||| ||||||||
Sbjct: 550 caagaggctgttcaac 565
Score = 139 bits (70), Expect = 6e-030
Identities = 139/162 (85%)
Strand = Plus / Plus
Query: 146 atggcggaccaggctaaccaacccactgtccttcataagctcggtggccagttccacctg 205
||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 41 atggctgagcaggctaatcaaccgactgtccttcagaagttcggtggccagttccacctt 100
Query: 206 cgctcgatcatctctgaaggtgtacgggcccgtaacatatgcccatctgtctcatcttat 265
|||| | | | ||||||||||||||||| || ||||| |||||||||||||||| |||
Sbjct: 101 ggctccagcttttctgaaggtgtacgggctcgcaacatctgcccatctgtctcattctat 160
Query: 266 gaaaggagatttgccacaaggaactacatgacccagagcctt 307
|| ||| | ||| ||||||||| ||||||||||||| |||||
Sbjct: 161 gacaggcgctttaccacaaggagctacatgacccagggcctt 202
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,549,535
Number of Sequences: 438736
Number of extensions: 2549535
Number of successful extensions: 13773
Number of sequences better than 0.5: 163
Number of HSP's better than 0.5 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12944
Number of HSP's gapped (non-prelim): 644
length of query: 1666
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1644
effective length of database: 2,790,767,724
effective search space: 4588022138256
effective search space used: 4588022138256
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)