BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.458
(708 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU166013.1|AU166013 AU166013 Rice panicle shorter than 3... 440 e-121
gb|CB679693.1|CB679693 OSJNEf03I08.f OSJNEf Oryza sativa (j... 440 e-121
gb|CB679694.1|CB679694 OSJNEf03I08.r OSJNEf Oryza sativa (j... 440 e-121
gb|CF279659.1|CF279659 14ETL--06-A17.b1 Rice etiolated leaf... 440 e-121
gb|CF321080.1|CF321080 HD--12-D09.b1 OsHDAC1-overexpressing... 440 e-121
dbj|AK063859.1| Oryza sativa (japonica cultivar-group) cDNA... 440 e-121
dbj|AK121768.1| Oryza sativa (japonica cultivar-group) cDNA... 440 e-121
ref|XM_468159.1| Oryza sativa (japonica cultivar-group), mRNA 440 e-121
ref|XM_507015.1| PREDICTED Oryza sativa (japonica cultivar-... 440 e-121
gb|CF320220.1|CF320220 HD--11-A05.b1 OsHDAC1-overexpressing... 432 e-118
gb|AU101611.1|AU101611 AU101611 Rice root Oryza sativa (jap... 408 e-111
gb|C97187.1|C97187 C97187 Rice callus Oryza sativa (japonic... 406 e-111
gb|C74169.1|C74169 C74169 Rice panicle shorter than 3cm Ory... 391 e-106
gb|C97189.1|C97189 C97189 Rice callus Oryza sativa (japonic... 385 e-104
gb|D16059.1|D16059 RICC2682A Rice callus Oryza sativa (japo... 379 e-102
gb|CF321081.1|CF321081 HD--12-D09.g1 OsHDAC1-overexpressing... 359 1e-096
gb|D23872.1|D23872 RICR0474A Rice root Oryza sativa (japoni... 351 3e-094
dbj|AP004057.3| Oryza sativa (japonica cultivar-group) geno... 311 3e-082
dbj|AP004095.3| Oryza sativa (japonica cultivar-group) geno... 311 3e-082
gb|AACV01005548.1| Oryza sativa (japonica cultivar-group) c... 311 3e-082
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 311 3e-082
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 311 3e-082
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 311 3e-082
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 311 3e-082
gb|CB681208.1|CB681208 OSJNEf07C13.f OSJNEf Oryza sativa (j... 307 4e-081
gb|CF291072.1|CF291072 14ROOT--01-F17.b1 Rice root plasmid ... 307 4e-081
gb|CF291073.1|CF291073 14ROOT--01-F17.g1 Rice root plasmid ... 307 4e-081
gb|CF332120.1|CF332120 NACL--08-I03.b1 Rice callus plasmid ... 307 4e-081
gb|CF334138.1|CF334138 JMT--03-F01.g1 AtJMT-overexpressing ... 307 4e-081
gb|CV729764.1|CV729764 FLO--02-P08.b1 Rice flower lambda ph... 307 4e-081
dbj|AK058689.1| Oryza sativa (japonica cultivar-group) cDNA... 307 4e-081
dbj|AK102775.1| Oryza sativa (japonica cultivar-group) cDNA... 307 4e-081
gb|CF278114.1|CF278114 14ETL--03-O07.b1 Rice etiolated leaf... 305 2e-080
gb|CF290931.1|CF290931 14ROOT--01-C15.g1 Rice root plasmid ... 305 2e-080
gb|CF300224.1|CF300224 7LEAF--04-I18.b1 Rice leaf plasmid c... 305 2e-080
gb|CF316435.1|CF316435 HD--05-L15.b1 OsHDAC1-overexpressing... 305 2e-080
gb|CV725224.1|CV725224 14Salt--02-D07.g1 Salt treated rice ... 305 2e-080
gb|CV725264.1|CV725264 14Salt--02-E08.b1 Salt treated rice ... 305 2e-080
gb|CV729154.1|CV729154 FLO--01-N15.b1 Rice flower lambda ph... 305 2e-080
gb|CV729276.1|CV729276 FLO--02-A12.g1 Rice flower lambda ph... 305 2e-080
gb|CV730045.1|CV730045 FLO--03-G08.b1 Rice flower lambda ph... 305 2e-080
gb|CV731301.1|CV731301 FLO--05-E10.g1 Rice flower lambda ph... 305 2e-080
gb|CV731827.1|CV731827 FLO--06-A12.b1 Rice flower lambda ph... 305 2e-080
gb|CV731941.1|CV731941 FLO--06-D06.b1 Rice flower lambda ph... 305 2e-080
gb|CV732106.1|CV732106 FLO--06-G24.b1 Rice flower lambda ph... 305 2e-080
gb|CV732685.1|CV732685 FLO--07-E09.b1 Rice flower lambda ph... 305 2e-080
gb|CV732899.1|CV732899 FLO--07-J08.b1 Rice flower lambda ph... 305 2e-080
gb|CV733472.1|CV733472 FLO--08-G12.b1 Rice flower lambda ph... 305 2e-080
ref|XM_475888.1| Oryza sativa (japonica cultivar-group), p... 305 2e-080
ref|XM_475896.1| Oryza sativa (japonica cultivar-group), p... 305 2e-080
gb|AU223262.1|AU223262 AU223262 Rice shoot Oryza sativa (ja... 301 3e-079
gb|CF277860.1|CF277860 14ETL--03-I21.b1 Rice etiolated leaf... 299 1e-078
gb|CF319259.1|CF319259 HD--09-L07.b1 OsHDAC1-overexpressing... 299 1e-078
gb|CF322002.1|CF322002 HD--13-H05.b1 OsHDAC1-overexpressing... 299 1e-078
gb|CF328780.1|CF328780 NACL--03-N16.g1 Rice callus plasmid ... 299 1e-078
gb|CF291344.1|CF291344 14ROOT--01-L17.b1 Rice root plasmid ... 297 4e-078
gb|CF291345.1|CF291345 14ROOT--01-L17.g1 Rice root plasmid ... 297 4e-078
gb|CV730501.1|CV730501 FLO--04-B05.b1 Rice flower lambda ph... 297 4e-078
gb|CV730502.1|CV730502 FLO--04-B05.g1 Rice flower lambda ph... 297 4e-078
gb|CF277861.1|CF277861 14ETL--03-I21.g1 Rice etiolated leaf... 293 7e-077
gb|CF291094.1|CF291094 14ROOT--01-G05.g1 Rice root plasmid ... 293 7e-077
gb|CF333198.1|CF333198 JMT--02-A01.g1 AtJMT-overexpressing ... 293 7e-077
gb|CV720611.1|CV720611 YBH--01-D16.b1 Rice before heading y... 293 7e-077
gb|CB681209.1|CB681209 OSJNEf07C13.r OSJNEf Oryza sativa (j... 291 3e-076
gb|CF333197.1|CF333197 JMT--02-A01.b1 AtJMT-overexpressing ... 291 3e-076
gb|AU063195.1|AU063195 AU063195 Rice callus Oryza sativa (j... 289 1e-075
gb|D15200.1|D15200 RICC0253A Rice callus Oryza sativa (japo... 283 6e-074
gb|CF331680.1|CF331680 NACL--07-O12.g1 Rice callus plasmid ... 283 6e-074
gb|CF331679.1|CF331679 NACL--07-O12.b1 Rice callus plasmid ... 281 2e-073
gb|AU063201.2|AU063201 AU063201 Rice callus Oryza sativa (j... 281 2e-073
gb|AU070603.1|AU070603 AU070603 Rice shoot Oryza sativa (ja... 276 2e-071
gb|CV732236.1|CV732236 FLO--06-K01.g1 Rice flower lambda ph... 274 6e-071
gb|AU063192.1|AU063192 AU063192 Rice callus Oryza sativa (j... 270 9e-070
gb|AU161983.1|AU161983 AU161983 Rice shoot Oryza sativa (ja... 268 4e-069
gb|CF319831.1|CF319831 HD--10-H19.b1 OsHDAC1-overexpressing... 262 2e-067
gb|CV731942.1|CV731942 FLO--06-D06.g1 Rice flower lambda ph... 260 9e-067
gb|CV729889.1|CV729889 FLO--03-C15.b1 Rice flower lambda ph... 258 4e-066
gb|CV732107.1|CV732107 FLO--06-G24.g1 Rice flower lambda ph... 256 1e-065
gb|CF319260.1|CF319260 HD--09-L07.g1 OsHDAC1-overexpressing... 252 2e-064
gb|AU033316.1|AU033316 AU033316 Rice shoot Oryza sativa (ja... 250 9e-064
gb|CV730046.1|CV730046 FLO--03-G08.g1 Rice flower lambda ph... 250 9e-064
gb|AQ687792.1|AQ687792 nbxb0075N05f CUGI Rice BAC Library O... 246 1e-062
gb|CF332121.1|CF332121 NACL--08-I03.g1 Rice callus plasmid ... 246 1e-062
gb|AC104709.2| Oryza sativa (japonica cultivar-group) chrom... 246 1e-062
gb|AACV01012685.1| Oryza sativa (japonica cultivar-group) c... 246 1e-062
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 246 1e-062
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 246 1e-062
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 246 1e-062
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 246 1e-062
gb|CV731828.1|CV731828 FLO--06-A12.g1 Rice flower lambda ph... 242 2e-061
gb|CF292832.1|CF292832 30DGS--01-M20.g1 Rice leaf plasmid c... 240 8e-061
gb|CV729890.1|CV729890 FLO--03-C15.g1 Rice flower lambda ph... 238 3e-060
gb|AACV01012687.1| Oryza sativa (japonica cultivar-group) c... 238 3e-060
gb|AU066181.1|AU066181 AU066181 Rice shoot Oryza sativa (ja... 226 1e-056
gb|CO435882.1|CO435882 OsMR516 5MT resistant rice mutant cD... 224 5e-056
gb|D23863.1|D23863 RICR0455A Rice root Oryza sativa (japoni... 220 8e-055
gb|D23843.1|D23843 RICR0365A Rice root Oryza sativa (japoni... 208 3e-051
gb|C74303.2|C74303 C74303 Rice panicle shorter than 3cm Ory... 200 7e-049
gb|CV731841.1|CV731841 FLO--06-A19.b1 Rice flower lambda ph... 190 7e-046
gb|CF330968.1|CF330968 NACL--06-O11.b1 Rice callus plasmid ... 182 2e-043
gb|AU063148.1|AU063148 AU063148 Rice callus Oryza sativa (j... 178 3e-042
gb|AU184014.1|AU184014 AU184014 Rice root Oryza sativa (jap... 178 3e-042
gb|CF330969.1|CF330969 NACL--06-O11.g1 Rice callus plasmid ... 170 7e-040
gb|CV730007.1|CV730007 FLO--03-F11.b1 Rice flower lambda ph... 163 2e-037
gb|CV732235.1|CV732235 FLO--06-K01.b1 Rice flower lambda ph... 163 2e-037
gb|CV732686.1|CV732686 FLO--07-E09.g1 Rice flower lambda ph... 157 1e-035
gb|CF279660.1|CF279660 14ETL--06-A17.g1 Rice etiolated leaf... 129 2e-027
gb|AACV01006845.1| Oryza sativa (japonica cultivar-group) c... 119 2e-024
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 119 2e-024
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 119 2e-024
dbj|AK058525.1| Oryza sativa (japonica cultivar-group) cDNA... 115 3e-023
gb|CV732900.1|CV732900 FLO--07-J08.g1 Rice flower lambda ph... 109 2e-021
gb|CF316436.1|CF316436 HD--05-L15.g1 OsHDAC1-overexpressing... 94 1e-016
gb|AU182761.1|AU182761 AU182761 Rice panicle shorter than 3... 50 0.002
gb|CA999231.1|CA999231 S234P_A05 Rice cold stress germinati... 50 0.002
gb|CF322003.1|CF322003 HD--13-H05.g1 OsHDAC1-overexpressing... 48 0.006
gb|CF300225.1|CF300225 7LEAF--04-I18.g1 Rice leaf plasmid c... 44 0.10
>gb|AU166013.1|AU166013 AU166013 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30556, mRNA sequence
Length = 641
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 73 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 132
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 133 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 192
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 193 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 252
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 253 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 312
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 313 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 372
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 373 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 418
>gb|CB679693.1|CB679693 OSJNEf03I08.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03I08 5', mRNA sequence
Length = 669
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 54 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 113
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 114 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 173
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 174 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 233
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 234 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 293
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 294 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 353
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 354 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 399
>gb|CB679694.1|CB679694 OSJNEf03I08.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03I08 3', mRNA sequence
Length = 842
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Minus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 624 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 565
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 505
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 504 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 445
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 444 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 385
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 384 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 325
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 324 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 279
>gb|CF279659.1|CF279659 14ETL--06-A17.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-A17, mRNA sequence
Length = 618
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 75 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 134
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 135 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 194
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 195 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 254
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 255 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 314
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 315 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 374
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 375 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 420
>gb|CF321080.1|CF321080 HD--12-D09.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-D09, mRNA sequence
Length = 694
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 113 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 172
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 173 cggatacaagaggtcaaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 232
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 233 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 292
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 293 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 352
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 353 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 412
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 413 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 458
>dbj|AK063859.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D08, full
insert sequence
Length = 668
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 43 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 102
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 103 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 162
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 163 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 222
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 223 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 282
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 283 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 342
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 343 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 388
>dbj|AK121768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092B03, full
insert sequence
Length = 707
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 93 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 152
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 153 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 212
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 213 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 272
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 273 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 332
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 333 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 392
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 393 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 438
>ref|XM_468159.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 668
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 43 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 102
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 103 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 162
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 163 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 222
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 223 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 282
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 283 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 342
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 343 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 388
>ref|XM_507015.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1715_H01.42
mRNA
Length = 707
Score = 440 bits (222), Expect = e-121
Identities = 315/346 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 93 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 152
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 153 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 212
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 213 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 272
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 273 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 332
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 333 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 392
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 393 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 438
>gb|CF320220.1|CF320220 HD--11-A05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-A05, mRNA sequence
Length = 555
Score = 432 bits (218), Expect = e-118
Identities = 314/346 (90%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 90 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 149
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 150 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 209
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| || |||| ||| | |||||
Sbjct: 210 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagagggtggcgtacgtgtacaa 269
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 270 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 329
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 330 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 389
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 390 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 435
>gb|AU101611.1|AU101611 AU101611 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0474, mRNA sequence
Length = 672
Score = 408 bits (206), Expect = e-111
Identities = 313/346 (90%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||| ||||| ||||| ||||||||||| ||||||||||||| |||||| ||||
Sbjct: 69 cgagatggt-aagggacgcaccgggcagcgcgtc-ggctctacgtccgcggcaccatcct 126
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 127 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 186
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 187 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 246
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 247 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 306
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccat 392
|||||||||||||||||||||||||||||||||| |||||||||||| || | |||||
Sbjct: 307 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgcttccat 366
Query: 393 gggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 367 ggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 412
>gb|C97187.1|C97187 C97187 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52917_1A, mRNA sequence
Length = 414
Score = 406 bits (205), Expect = e-111
Identities = 307/342 (89%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||| |||||||||||| | |||||||||| |||||| |||| |||
Sbjct: 71 atggtgaagggacgcaccgggcagcgcgtgngcgtctacgtccgcggcaccatcctcgga 130
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
|||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 131 tacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 190
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
|||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||||||
Sbjct: 191 aacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggcc 250
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
|||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct: 251 aagaccaagagcngcggcacgaactaccgctgcatctggggcaaggtcacccgcccccat 310
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
||||||||||||||||||||||||||||||| |||||||||||| || | | ||||||
Sbjct: 311 ggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccccccgctttcatgggg 370
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
|| |||||||| || ||||||||||| |||||||| ||||||
Sbjct: 371 cgcaaggtcagagtcttcatgtacccnagcagcatttaaaga 412
>gb|C74169.1|C74169 C74169 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30556_3A, mRNA sequence
Length = 389
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 81 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 140
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 141 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 200
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 201 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaa 260
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 261 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 320
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacct 377
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ccatggcaactccggcgtcgtccgcgccaagttcaagtccaacct 365
>gb|C97189.1|C97189 C97189 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52920_1A, mRNA sequence
Length = 410
Score = 385 bits (194), Expect = e-104
Identities = 299/335 (89%)
Strand = Plus / Plus
Query: 97 atggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtccttgga 156
||||||||||| ||||| |||||||||||| | ||||||||| |||||| |||| |||
Sbjct: 70 atggtgaagggacgcaccgggcagcgcgtgcgctcctacgtccgcggcaccatcctcgga 129
Query: 157 tacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtg 216
|||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 130 tacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtg 189
Query: 217 aacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggcc 276
|||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||||||
Sbjct: 190 aacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggcc 249
Query: 277 aagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcat 336
|||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct: 250 aagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccat 309
Query: 337 ggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccgccggaatccatgggc 396
||||||||||||||||||||||||||||||| ||||||||| || | | ||||||||
Sbjct: 310 ggcaactccggcgtcgtccgcgccaagttcaagtccaacctncccnccgcttccatgggg 369
Query: 397 cgtaaggtcagggtgttcatgtaccccagcagcat 431
|| |||||||| || ||||||||||| ||||||||
Sbjct: 370 cgcaaggtcagagtcttcatgtacccnagcagcat 404
>gb|D16059.1|D16059 RICC2682A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2682A, mRNA sequence
Length = 367
Score = 379 bits (191), Expect = e-102
Identities = 263/288 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||| ||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 61 cgagatggtgangggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 120
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 180
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 181 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtntacaa 240
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 241 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 300
Query: 333 gcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 301 ccatggcaacttcggcgtcgtccgcgccaagttcaagtncaacctgcc 348
>gb|CF321081.1|CF321081 HD--12-D09.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-D09, mRNA sequence
Length = 534
Score = 359 bits (181), Expect = 1e-096
Identities = 269/297 (90%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 142 ggcaccgtccttggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtg 201
|||||| |||| ||||||||| |||| ||||||||||||||||||| ||||||||||||
Sbjct: 532 ggcaccatcctcggatacaagaggtcaaagtcgaaccagtacgagaacacgtcgctggtg 473
Query: 202 cagatcgagggggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcc 261
||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||
Sbjct: 472 cagatcgagggggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcg 413
Query: 262 tacatctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaag 321
||| | ||||||||||||||||||||| ||||||| ||||||||||||| |||||||||
Sbjct: 412 tacgtgtacaaggccaagaccaagagcggcggcacgaactaccgctgcat-tggggcaag 354
Query: 322 gtcgcccgcccgcatggcaactccggcgtcgtccgcgccaagttcaggtccaacctgccg 381
||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 353 gtcacccgcccccatggcaactccggcgtcgtccgcgccaagttcaagtccaacctgccc 294
Query: 382 ccggaatccatgggccgtaaggtcagggtgttcatgtaccccagcagcatctaaaga 438
|| | |||||||| || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 293 cccgcttccatggggcgcaaggtcagagtcttcatgtacccgagcagcatctaaaga 237
>gb|D23872.1|D23872 RICR0474A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0474_1A, mRNA sequence
Length = 334
Score = 351 bits (177), Expect = 3e-094
Identities = 243/265 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 70 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 129
Query: 153 tggatacaagcggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgaggg 212
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 130 cggatacaagaggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgaggg 189
Query: 213 ggtgaacaccaaggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaa 272
|||||||||||||||||| || |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 190 ggtgaacaccaaggaggaggtggcgtggtactgcgggaagaggatggcgtacgtttacaa 249
Query: 273 ggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgcccgccc 332
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 250 ggccaagaccaagagcggcggcacgaactaccgctgcatctggggcaaggtcacccgccc 309
Query: 333 gcatggcaactccggcgtcgtccgc 357
|||||||||| |||||||||||||
Sbjct: 310 ccatggcaacttcggcgtcgtccgc 334
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1316_E06
Length = 110197
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Plus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8717 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 8776
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 8777 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 8836
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 8837 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 8896
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 8897 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 8933
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 8548 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 8607
Query: 153 tggatacaag 162
|||||||||
Sbjct: 8608 cggatacaag 8617
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 9035 aaggtcagagtcttcatgtacccgagcagcatctaaag 9072
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1715_H01
Length = 138733
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Plus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 118848 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 118907
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 118908 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 118967
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 118968 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 119027
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 119028 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 119064
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 118679 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 118738
Query: 153 tggatacaag 162
|||||||||
Sbjct: 118739 cggatacaag 118748
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 119166 aaggtcagagtcttcatgtacccgagcagcatctaaag 119203
>gb|AACV01005548.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005548, whole
genome shotgun sequence
Length = 45545
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Minus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 42725 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 42666
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 42665 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 42606
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 42605 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 42546
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 42545 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 42509
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 42894 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 42835
Query: 153 tggatacaag 162
|||||||||
Sbjct: 42834 cggatacaag 42825
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 42407 aaggtcagagtcttcatgtacccgagcagcatctaaag 42370
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Plus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8543097 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 8543156
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 8543157 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 8543216
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 8543217 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 8543276
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 8543277 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 8543313
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 8542928 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 8542987
Query: 153 tggatacaag 162
|||||||||
Sbjct: 8542988 cggatacaag 8542997
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 8543415 aaggtcagagtcttcatgtacccgagcagcatctaaag 8543452
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Plus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 20026855 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 20026914
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 20026915 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 20026974
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 20026975 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 20027034
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 20027035 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 20027071
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 20026686 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 20026745
Query: 153 tggatacaag 162
|||||||||
Sbjct: 20026746 cggatacaag 20026755
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 20027173 aaggtcagagtcttcatgtacccgagcagcatctaaag 20027210
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Plus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 33479919 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 33479978
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 33479979 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 33480038
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 33480039 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 33480098
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 33480099 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 33480135
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 33479750 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 33479809
Query: 153 tggatacaag 162
|||||||||
Sbjct: 33479810 cggatacaag 33479819
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 33480237 aaggtcagagtcttcatgtacccgagcagcatctaaag 33480274
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 311 bits (157), Expect = 3e-082
Identities = 202/217 (93%)
Strand = Plus / Plus
Query: 164 ggtccaagtcgaaccagtacgagactacgtcgctggtgcagatcgagggggtgaacacca 223
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 33378098 ggtcgaagtcgaaccagtacgagaacacgtcgctggtgcagatcgagggggtgaacacca 33378157
Query: 224 aggaggacgtcgcgtggtactgcgggaagcggatggcctacatctacaaggccaagacca 283
||||||| || |||||||||||||||||| ||||||| ||| | ||||||||||||||||
Sbjct: 33378158 aggaggaggtggcgtggtactgcgggaagaggatggcgtacgtgtacaaggccaagacca 33378217
Query: 284 agagcagcggcacccactaccgctgcatctggggcaaggtcgcccgcccgcatggcaact 343
||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 33378218 agagcggcggcacgaactaccgctgcatctggggcaaggtcacccgcccccatggcaact 33378277
Query: 344 ccggcgtcgtccgcgccaagttcaggtccaacctgcc 380
|||||||||||||||||||||||| ||||||||||||
Sbjct: 33378278 ccggcgtcgtccgcgccaagttcaagtccaacctgcc 33378314
Score = 91.7 bits (46), Expect = 5e-016
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 93 cgagatggtgaaggggcgcacggggcagcgcgtgaggctctacgtccggggcaccgtcct 152
||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| ||||
Sbjct: 33377929 cgagatggtgaagggacgcaccgggcagcgcgtgcggctctacgtccgcggcaccatcct 33377988
Query: 153 tggatacaag 162
|||||||||
Sbjct: 33377989 cggatacaag 33377998
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 400 aaggtcagggtgttcatgtaccccagcagcatctaaag 437
|||||||| || ||||||||||| ||||||||||||||
Sbjct: 33378416 aaggtcagagtcttcatgtacccgagcagcatctaaag 33378453
>gb|CB681208.1|CB681208 OSJNEf07C13.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07C13 5', mRNA sequence
Length = 729
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 78 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 137
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 138 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 197
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 198 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 257
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 258 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 317
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 318 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 377
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 378 taccccagcagcatctaaa 396
>gb|CF291072.1|CF291072 14ROOT--01-F17.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-F17, mRNA sequence
Length = 611
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 103 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 162
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 163 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 222
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 223 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 282
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 283 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 342
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 343 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 402
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 403 taccccagcagcatctaaa 421
>gb|CF291073.1|CF291073 14ROOT--01-F17.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-F17, mRNA sequence
Length = 566
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Minus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 546 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 487
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 486 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 427
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 426 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 367
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 366 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 307
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 306 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 247
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 246 taccccagcagcatctaaa 228
>gb|CF332120.1|CF332120 NACL--08-I03.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-I03, mRNA sequence
Length = 495
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 129 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 188
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 189 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 248
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 249 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 308
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 309 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 368
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 369 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 428
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 429 taccccagcagcatctaaa 447
>gb|CF334138.1|CF334138 JMT--03-F01.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--03-F01, mRNA sequence
Length = 537
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 126 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 185
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 186 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 245
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 246 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 305
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 306 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 365
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 366 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 425
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 426 taccccagcagcatctaaa 444
>gb|CV729764.1|CV729764 FLO--02-P08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-P08,
mRNA sequence
Length = 551
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 139 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 198
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 199 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 258
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 259 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 318
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 319 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 378
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 379 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 438
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 439 taccccagcagcatctaaa 457
>dbj|AK058689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-B02, full
insert sequence
Length = 643
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 102 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 161
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 162 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 221
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 222 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 281
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 282 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 341
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 342 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 401
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 402 taccccagcagcatctaaa 420
>dbj|AK102775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107H21, full
insert sequence
Length = 742
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 109 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 168
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 169 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 228
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 229 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 288
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 289 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 348
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 349 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 408
Query: 418 taccccagcagcatctaaa 436
|||||||||||||||||||
Sbjct: 409 taccccagcagcatctaaa 427
>gb|CF278114.1|CF278114 14ETL--03-O07.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-O07, mRNA sequence
Length = 641
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 109 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 168
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 169 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 228
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 229 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 288
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 289 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 348
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 349 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 408
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 409 taccctagcagcatctaa 426
>gb|CF290931.1|CF290931 14ROOT--01-C15.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-C15, mRNA sequence
Length = 495
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CF300224.1|CF300224 7LEAF--04-I18.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--04-I18, mRNA sequence
Length = 641
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 130 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 189
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 190 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 249
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 250 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 309
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 310 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 369
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 370 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 429
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 430 taccctagcagcatctaa 447
>gb|CF316435.1|CF316435 HD--05-L15.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-L15, mRNA sequence
Length = 512
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CV725224.1|CV725224 14Salt--02-D07.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-D07, mRNA sequence
Length = 492
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CV725264.1|CV725264 14Salt--02-E08.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-E08, mRNA sequence
Length = 488
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CV729154.1|CV729154 FLO--01-N15.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-N15,
mRNA sequence
Length = 503
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CV729276.1|CV729276 FLO--02-A12.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-A12,
mRNA sequence
Length = 552
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 145 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 204
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 205 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 264
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 265 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 324
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 325 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 384
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 385 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 444
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 445 taccctagcagcatctaa 462
>gb|CV730045.1|CV730045 FLO--03-G08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-G08,
mRNA sequence
Length = 521
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 144 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 203
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 204 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 263
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 264 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 323
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 324 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 383
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 384 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 443
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 444 taccctagcagcatctaa 461
>gb|CV731301.1|CV731301 FLO--05-E10.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-E10,
mRNA sequence
Length = 490
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CV731827.1|CV731827 FLO--06-A12.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-A12,
mRNA sequence
Length = 491
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 114 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 173
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 174 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 233
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 234 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 293
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 294 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 353
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 354 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 413
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 414 taccctagcagcatctaa 431
>gb|CV731941.1|CV731941 FLO--06-D06.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-D06,
mRNA sequence
Length = 491
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 116 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 175
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 176 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 235
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 236 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 295
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 296 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 355
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 356 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 415
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 416 taccctagcagcatctaa 433
>gb|CV732106.1|CV732106 FLO--06-G24.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-G24,
mRNA sequence
Length = 542
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 167 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 226
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 227 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 286
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 287 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 346
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 347 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 406
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 407 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 466
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 467 taccctagcagcatctaa 484
>gb|CV732685.1|CV732685 FLO--07-E09.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-E09,
mRNA sequence
Length = 540
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 166 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 225
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 226 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 285
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 286 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 345
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 346 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 405
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 406 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 465
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 466 taccctagcagcatctaa 483
>gb|CV732899.1|CV732899 FLO--07-J08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-J08,
mRNA sequence
Length = 489
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 113 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 172
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 173 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 232
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 233 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 292
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 293 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 352
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 353 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 412
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 413 taccctagcagcatctaa 430
>gb|CV733472.1|CV733472 FLO--08-G12.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-G12,
mRNA sequence
Length = 559
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 181 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 240
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 241 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 300
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 301 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 360
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 361 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 420
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 421 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 480
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 481 taccctagcagcatctaa 498
>ref|XM_475888.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 336
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 19 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 78
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 79 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 138
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 139 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 198
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 199 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggcgtcgtccgc 258
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 259 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 318
Query: 418 taccccagcagcatctaa 435
||||| ||||||||||||
Sbjct: 319 taccctagcagcatctaa 336
>ref|XM_475896.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 336
Score = 305 bits (154), Expect = 2e-080
Identities = 277/318 (87%)
Strand = Plus / Plus
Query: 118 cagcgcgtgaggctctacgtccggggcaccgtccttggatacaagcggtccaagtcgaac 177
|||||||||||||| |||||||| |||||| |||| || |||||| |||| |||||||||
Sbjct: 19 cagcgcgtgaggctgtacgtccgcggcaccatcctcggctacaagaggtcgaagtcgaac 78
Query: 178 cagtacgagactacgtcgctggtgcagatcgagggggtgaacaccaaggaggacgtcgcg 237
|||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct: 79 cagtacgagaacacgtcgctgctgcagatcgagggggtgaacaccaaggaggaggttggg 138
Query: 238 tggtactgcgggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacc 297
|||||| ||||||||| || |||||| |||||||||||||||| ||||||| || | ||
Sbjct: 139 tggtacgccgggaagcgcatcgcctacgtctacaaggccaagacgaagagcaacgactcc 198
Query: 298 cactaccgctgcatctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgc 357
| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 199 accatccgctgcatctggggcaaggtcacccgcccgcacggcaactccggtgtcgtccgc 258
Query: 358 gccaagttcaggtccaacctgccgccggaatccatgggccgtaaggtcagggtgttcatg 417
||||||||| |||||||||| ||||| ||||||||| |||||| | || ||||||
Sbjct: 259 gccaagttccggtccaacctcccgcccacctccatgggcaagaaggtccgcgtcttcatg 318
Query: 418 taccccagcagcatctaa 435
||||||||||||||||||
Sbjct: 319 taccccagcagcatctaa 336
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 888,200
Number of Sequences: 438736
Number of extensions: 888200
Number of successful extensions: 4698
Number of sequences better than 0.5: 117
Number of HSP's better than 0.5 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4309
Number of HSP's gapped (non-prelim): 244
length of query: 708
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 687
effective length of database: 2,791,206,460
effective search space: 1917558838020
effective search space used: 1917558838020
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)