BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.452
(1348 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK067120.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC O... 60 3e-006
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AACV01025524.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CZ557374.1|CZ557374 M0034218 AS_TRIM_TDNA_B1 Oryza sativ... 58 1e-005
gb|CB670206.1|CB670206 OSJNEe03C20.r OSJNEe Oryza sativa (j... 58 1e-005
gb|AC135925.2| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AACV01012667.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_475858.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
ref|NT_107138.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|AACV01023423.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01025949.1| Oryza sativa (japonica cultivar-group) C... 54 2e-004
gb|CH401371.1| Oryza sativa (japonica cultivar-group) scaff... 54 2e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AC116367.10| Oryza sativa (japonica cultivar-group) chro... 54 2e-004
gb|AC148822.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AQ289403.1|AQ289403 nbxb0035C17r CUGI Rice BAC Library O... 52 8e-004
gb|CZ557857.1|CZ557857 M0036359 AS_TRIM_TDNA_B1 Oryza sativ... 52 8e-004
dbj|AK065898.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AK107147.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC O... 52 8e-004
emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC O... 52 8e-004
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 52 8e-004
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AACV01017667.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AACV01025099.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
ref|XM_468561.1| Oryza sativa (japonica cultivar-group), mRNA 52 8e-004
ref|XM_480822.1| Oryza sativa (japonica cultivar-group), mRNA 52 8e-004
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 52 8e-004
dbj|AP004559.2| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 52 8e-004
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
dbj|AK058286.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK070450.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK071309.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK100639.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK104314.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AC134237.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AC121490.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AACV01002479.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01005757.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NM_190856.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 50 0.003
dbj|AP003280.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AK070624.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.013
dbj|AK104711.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.013
dbj|AK106421.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.013
gb|AC123524.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|AC130724.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|AC136525.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
dbj|AP003818.2| Oryza sativa (japonica cultivar-group) geno... 48 0.013
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 48 0.013
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 48 0.013
gb|AACV01011682.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01017045.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01022625.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01023611.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01027916.1| Oryza sativa (japonica cultivar-group) C... 48 0.013
ref|XM_479597.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.013
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 48 0.013
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 48 0.013
gb|CH401265.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CH401258.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 48 0.013
gb|AC146937.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|AQ161274.1|AQ161274 nbxb0006L07f CUGI Rice BAC Library O... 46 0.050
gb|AQ289986.1|AQ289986 nbxb0036K13f CUGI Rice BAC Library O... 46 0.050
gb|C22548.1|C22548 C22548 Rice panicle at ripening stage Or... 46 0.050
gb|C22549.1|C22549 C22549 Rice panicle at ripening stage Or... 46 0.050
gb|CB660294.1|CB660294 OSJNEd01O09.r OSJNEd Oryza sativa (j... 46 0.050
gb|CB660295.1|CB660295 OSJNEd01O10.f OSJNEd Oryza sativa (j... 46 0.050
gb|CB667205.1|CB667205 OSJNEd14G23.r OSJNEd Oryza sativa (j... 46 0.050
emb|AL607093.1|OSJN01002 Oryza sativa (japonica cultivar-gr... 46 0.050
emb|AL607100.1|OSJN01008 Oryza sativa (japonica cultivar-gr... 46 0.050
dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chro... 46 0.050
dbj|AP005005.1| Oryza sativa (japonica cultivar-group) chro... 46 0.050
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 46 0.050
dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK072425.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK099661.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK101874.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK102100.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK103263.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK110271.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AP004158.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK111596.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
dbj|AK121185.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.050
emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC O... 46 0.050
emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC O... 46 0.050
dbj|AP003962.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AP004397.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic seque... 46 0.050
gb|AC104473.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 ... 46 0.050
dbj|AP004584.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
gb|AC129226.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AP005198.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AP003742.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AP004338.4| Oryza sativa (japonica cultivar-group) geno... 46 0.050
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 46 0.050
dbj|AP003074.2| Oryza sativa (japonica cultivar-group) geno... 46 0.050
gb|AACV01000574.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01003191.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01006146.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01008110.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01013012.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01015127.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01016778.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01017114.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01017855.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01018319.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01019678.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01022658.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01022660.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01022664.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01023735.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01025444.1| Oryza sativa (japonica cultivar-group) c... 46 0.050
gb|AACV01025950.1| Oryza sativa (japonica cultivar-group) C... 46 0.050
gb|AACV01026452.1| Oryza sativa (japonica cultivar-group) C... 46 0.050
dbj|AP000399.1| Oryza sativa (japonica cultivar-group) geno... 46 0.050
ref|NM_187624.1| Oryza sativa (japonica cultivar-group), p... 46 0.050
ref|XM_463835.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|XM_476541.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|XM_479726.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|XM_481215.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NM_188775.1| Oryza sativa (japonica cultivar-group), p... 46 0.050
dbj|AP004752.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AP005091.3| Oryza sativa (japonica cultivar-group) geno... 46 0.050
ref|XM_550622.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.050
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 46 0.050
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 46 0.050
dbj|AP002865.1| Oryza sativa (japonica cultivar-group) geno... 46 0.050
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401260.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401219.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 46 0.050
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 46 0.050
gb|AC136971.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|AC146524.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.050
gb|CL300164.1|CL300164 INJA11_020_NIPP INJASNP_NIPP Oryza s... 44 0.20
gb|CB649078.1|CB649078 OSJNEb12N03.f OSJNEb Oryza sativa (j... 44 0.20
gb|CB653996.1|CB653996 OSJNEc05I12.r OSJNEc Oryza sativa (j... 44 0.20
gb|CB659759.1|CB659759 OSJNEd01A01.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB659947.1|CB659947 OSJNEd01E23.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB660564.1|CB660564 OSJNEd02H18.f OSJNEd Oryza sativa (j... 44 0.20
gb|CB661236.1|CB661236 OSJNEd03N11.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB663660.1|CB663660 OSJNEd08O09.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB666572.1|CB666572 OSJNEd13I11.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB666574.1|CB666574 OSJNEd13I12.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB666648.1|CB666648 OSJNEd13K02.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB667837.1|CB667837 OSJNEd15F21.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB667886.1|CB667886 OSJNEd15H01.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB667925.1|CB667925 OSJNEd15I01.r OSJNEd Oryza sativa (j... 44 0.20
gb|CB670952.1|CB670952 OSJNEe04E16.r OSJNEe Oryza sativa (j... 44 0.20
gb|CF326454.1|CF326454 JMT1--06-B18.g1 AtJMT-overexpressing... 44 0.20
gb|CV723774.1|CV723774 root--04-L16.g1 Rice root lambda pha... 44 0.20
gb|CX728029.1|CX728029 OSJNEd02H18.r OSJNEd Oryza sativa (j... 44 0.20
dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK069727.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AK120351.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.20
dbj|AP004648.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
dbj|AP004157.2| Oryza sativa (japonica cultivar-group) geno... 44 0.20
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
dbj|AP005516.5| Oryza sativa (japonica cultivar-group) geno... 44 0.20
dbj|AP003858.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 44 0.20
ref|NT_107124.1| Oryza sativa (japonica cultivar-group) 44 0.20
gb|AACV01003186.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01008640.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01011332.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01014027.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01015493.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01015494.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01017514.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01023732.1| Oryza sativa (japonica cultivar-group) c... 44 0.20
gb|AACV01026200.1| Oryza sativa (japonica cultivar-group) C... 44 0.20
ref|NM_186680.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
ref|XM_463824.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
ref|XM_463825.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
ref|XM_463826.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
ref|XM_480861.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.20
dbj|AP004728.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
dbj|AP005442.3| Oryza sativa (japonica cultivar-group) geno... 44 0.20
gb|CH401441.1| Oryza sativa (japonica cultivar-group) scaff... 44 0.20
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|CH401213.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|AC145808.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.20
gb|AQ328181.1|AQ328181 nbxb0042J15f CUGI Rice BAC Library O... 42 0.77
dbj|AG206681.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.77
gb|AU056526.1|AU056526 AU056526 Oryza sativa mature leaf Ni... 42 0.77
gb|AU071036.1|AU071036 AU071036 Rice cDNA from young root O... 42 0.77
gb|AU082462.1|AU082462 AU082462 Rice callus Oryza sativa (j... 42 0.77
gb|CB651336.1|CB651336 OSJNEb16E03.f OSJNEb Oryza sativa (j... 42 0.77
gb|CB670134.1|CB670134 OSJNEe03B05.r OSJNEe Oryza sativa (j... 42 0.77
gb|CB670193.1|CB670193 OSJNEe03C13.r OSJNEe Oryza sativa (j... 42 0.77
dbj|AK066381.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK072170.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK100606.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK101952.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK102164.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK107046.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK109954.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK110293.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK111737.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK111890.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK120857.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
dbj|AK121286.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.77
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 42 0.77
gb|AC099732.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 ge... 42 0.77
gb|AC125472.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromoso... 42 0.77
dbj|AP005826.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP005613.2| Oryza sativa (japonica cultivar-group) geno... 42 0.77
emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC O... 42 0.77
emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Parti... 42 0.77
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 42 0.77
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 42 0.77
dbj|AP003615.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP005457.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP003250.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP005461.2| Oryza sativa (japonica cultivar-group) geno... 42 0.77
gb|AACV01000149.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01002138.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01003641.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01003713.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01005519.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01005981.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01006149.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01007903.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01009831.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01009832.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01009922.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01014394.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01014495.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01014841.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01020508.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01024276.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01024971.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
gb|AACV01025609.1| Oryza sativa (japonica cultivar-group) c... 42 0.77
ref|NM_192128.1| Oryza sativa (japonica cultivar-group), p... 42 0.77
ref|XM_462744.1| Oryza sativa (japonica cultivar-group), p... 42 0.77
ref|XM_464706.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.77
ref|XM_464708.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.77
ref|XM_469711.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.77
ref|XM_470532.1| Oryza sativa (japonica cultivar-group), p... 42 0.77
ref|XM_470602.1| Oryza sativa (japonica cultivar-group), p... 42 0.77
ref|XM_472608.1| Oryza sativa (japonica cultivar-group), p... 42 0.77
ref|XM_472767.1| Oryza sativa (japonica cultivar-group), p... 42 0.77
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 42 0.77
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 42 0.77
ref|NT_079911.2| Oryza sativa (japonica cultivar-group) 42 0.77
ref|NT_107190.1| Oryza sativa (japonica cultivar-group) 42 0.77
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 42 0.77
dbj|AP004140.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP005679.2| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP005742.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
ref|XM_550056.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.77
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 42 0.77
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 42 0.77
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 42 0.77
dbj|AP003450.3| Oryza sativa (japonica cultivar-group) geno... 42 0.77
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
gb|CH401273.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.77
emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromoso... 42 0.77
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 42 0.77
gb|AQ916019.1|AQ916019 nbeb0061I19f CUGI Rice BAC Library (... 40 3.1
gb|CB647139.1|CB647139 OSJNEb09P01.r OSJNEb Oryza sativa (j... 40 3.1
gb|CB654413.1|CB654413 OSJNEc06N04.f OSJNEc Oryza sativa (j... 40 3.1
gb|CB654414.1|CB654414 OSJNEc06N04.r OSJNEc Oryza sativa (j... 40 3.1
gb|CB655494.1|CB655494 OSJNEc08P18.f OSJNEc Oryza sativa (j... 40 3.1
gb|CB659135.1|CB659135 OSJNEc15N08.r OSJNEc Oryza sativa (j... 40 3.1
gb|CB661965.1|CB661965 OSJNEd05I05.r OSJNEd Oryza sativa (j... 40 3.1
gb|CB662172.1|CB662172 OSJNEd05P02.r OSJNEd Oryza sativa (j... 40 3.1
gb|CB668515.1|CB668515 OSJNEd16G12.r OSJNEd Oryza sativa (j... 40 3.1
gb|CB668618.1|CB668618 OSJNEd16J01.r OSJNEd Oryza sativa (j... 40 3.1
gb|CB677739.1|CB677739 OSJNEe15A20.f OSJNEe Oryza sativa (j... 40 3.1
gb|CV724173.1|CV724173 root--06-B13.g1 Rice root lambda pha... 40 3.1
gb|CV724230.1|CV724230 root--06-E13.g1 Rice root lambda pha... 40 3.1
emb|AL513004.1|CNS07EFJ Oryza sativa (japonica cultivar-gro... 40 3.1
dbj|AP005581.1| Oryza sativa (japonica cultivar-group) chro... 40 3.1
dbj|AK063039.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK068774.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK071957.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK072639.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK102152.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK110047.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK111851.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK111885.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK119892.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK120882.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA... 40 3.1
emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC O... 40 3.1
emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC O... 40 3.1
emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC O... 40 3.1
emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B... 40 3.1
gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 gen... 40 3.1
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 40 3.1
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 40 3.1
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 40 3.1
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 40 3.1
ref|NT_107231.1| Oryza sativa (japonica cultivar-group) 40 3.1
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 40 3.1
dbj|AP005655.2| Oryza sativa (japonica cultivar-group) geno... 40 3.1
gb|AC108500.3| Oryza sativa (japonica cultivar-group) chrom... 40 3.1
dbj|AP003614.2| Oryza sativa (japonica cultivar-group) geno... 40 3.1
dbj|AP004739.3| Oryza sativa (japonica cultivar-group) geno... 40 3.1
dbj|AP003769.3| Oryza sativa (japonica cultivar-group) geno... 40 3.1
gb|AACV01002084.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01009220.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01012356.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01014320.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01014932.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01015028.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01020148.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01023729.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01024176.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01024191.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01024192.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
gb|AACV01025610.1| Oryza sativa (japonica cultivar-group) c... 40 3.1
ref|NM_186147.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.1
ref|NM_191955.1| Oryza sativa (japonica cultivar-group), p... 40 3.1
ref|XM_471702.1| Oryza sativa (japonica cultivar-group), p... 40 3.1
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 40 3.1
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 40 3.1
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 40 3.1
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 40 3.1
dbj|AP004145.2| Oryza sativa (japonica cultivar-group) geno... 40 3.1
dbj|AP003706.3| Oryza sativa (japonica cultivar-group) geno... 40 3.1
dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1... 40 3.1
dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1... 40 3.1
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 40 3.1
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 40 3.1
emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC... 40 3.1
>dbj|AK067120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096K04, full
insert sequence
Length = 1655
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1032 gcgatgtctacagcttcggtgtggttcttctggagctc 1069
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 144241
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 13826 gcgatgtctacagcttcggtgtggttcttctggagctc 13863
>ref|NT_107152.1| Oryza sativa (japonica cultivar-group)
Length = 2853905
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 2295186 gcgatgtctacagcttcggtgtggttcttctggagctc 2295223
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 1230989 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 1231031
>gb|AACV01025524.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025524, whole
genome shotgun sequence
Length = 82845
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 34416 gcgatgtctacagcttcggtgtggttcttctggagctc 34453
>gb|CH401282.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000119 genomic
scaffold, whole genome shotgun sequence
Length = 4546750
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 3156893 gcgatgtctacagcttcggtgtggttcttctggagctc 3156930
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 2068065 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 2068107
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 4138392 tacagcttcggcgtggtgctgcttgagct 4138420
Score = 40.1 bits (20), Expect = 3.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||| || ||||||||||| |||||||| |||||||
Sbjct: 4153074 agtgcgacgtgtacagcttcggggtggtgctaatggagct 4153113
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 22340539 gcgatgtctacagcttcggtgtggttcttctggagctc 22340576
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 17133421 cgatgtgtacagcttcggcgtggtgctcctggag 17133454
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 21251711 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 21251753
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 23322038 tacagcttcggcgtggtgctgcttgagct 23322066
Score = 42.1 bits (21), Expect = 0.77
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 401 gagtttgtcgccaatggaagc 421
|||||||||||||||||||||
Sbjct: 15470198 gagtttgtcgccaatggaagc 15470178
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 6605392 tacagcttcggcgtggtgctgcttgagct 6605420
Score = 40.1 bits (20), Expect = 3.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||| || ||||||||||| |||||||| |||||||
Sbjct: 23336720 agtgcgacgtgtacagcttcggggtggtgctaatggagct 23336759
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| |||| |||||| | ||||||
Sbjct: 5467104 tacagcttcggcgtgctgctgctggaggtgatcacg 5467139
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| |||| |||||| | ||||||
Sbjct: 5465594 tacagcttcggcgtgctgctgctggaggtgatcacg 5465629
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1199 caaataaatatacatgattt 1218
||||||||||||||||||||
Sbjct: 5302247 caaataaatatacatgattt 5302228
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 26123588 gcgatgtctacagcttcggtgtggttcttctggagctc 26123625
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 20840915 cgatgtgtacagcttcggcgtggtgctcctggag 20840948
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 25059404 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 25059446
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 27147964 tacagcttcggcgtggtgctgcttgagct 27147992
Score = 42.1 bits (21), Expect = 0.77
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 401 gagtttgtcgccaatggaagc 421
|||||||||||||||||||||
Sbjct: 18781149 gagtttgtcgccaatggaagc 18781129
Score = 40.1 bits (20), Expect = 3.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||| || ||||||||||| |||||||| |||||||
Sbjct: 27161623 agtgcgacgtgtacagcttcggggtggtgctaatggagct 27161662
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| |||| |||||| | ||||||
Sbjct: 5771617 tacagcttcggcgtgctgctgctggaggtgatcacg 5771652
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1199 caaataaatatacatgattt 1218
||||||||||||||||||||
Sbjct: 5572723 caaataaatatacatgattt 5572704
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
||||||||||||||||||| ||||| ||||||||||||
Sbjct: 26051764 gcgatgtctacagcttcggtgtggttcttctggagctc 26051801
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 20767129 cgatgtgtacagcttcggcgtggtgctcctggag 20767162
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 24987609 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 24987651
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 27073561 tacagcttcggcgtggtgctgcttgagct 27073589
Score = 42.1 bits (21), Expect = 0.77
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 401 gagtttgtcgccaatggaagc 421
|||||||||||||||||||||
Sbjct: 18707376 gagtttgtcgccaatggaagc 18707356
Score = 40.1 bits (20), Expect = 3.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||| || ||||||||||| |||||||| |||||||
Sbjct: 27087223 agtgcgacgtgtacagcttcggggtggtgctaatggagct 27087262
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| |||| |||||| | ||||||
Sbjct: 5771610 tacagcttcggcgtgctgctgctggaggtgatcacg 5771645
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1199 caaataaatatacatgattt 1218
||||||||||||||||||||
Sbjct: 5572712 caaataaatatacatgattt 5572693
>gb|CZ557374.1|CZ557374 M0034218 AS_TRIM_TDNA_B1 Oryza sativa (japonica cultivar-group)
genomic clone M0034218, DNA sequence
Length = 437
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 88 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 48
>gb|CB670206.1|CB670206 OSJNEe03C20.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03C20 3', mRNA sequence
Length = 794
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 586 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 546
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
complete sequence
Length = 177861
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 77963 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 78003
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0079H23, complete sequence
Length = 191765
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 21535 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 21575
>gb|AACV01012667.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012667, whole
genome shotgun sequence
Length = 46265
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 36891 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 36851
>ref|XM_475858.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2739
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 2342 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 2382
>ref|NT_107220.1| Oryza sativa (japonica cultivar-group)
Length = 436435
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 178990 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 179030
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 9558265 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 9558305
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| ||||| || ||||||||
Sbjct: 4980816 gtctacagcttcggcgtcgtgctggtgcagctcatc 4980781
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 26858578 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 26858618
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 13512873 gcgatgtgtacagcttcggggtggttcttctagagctcat 13512912
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 9109328 tctacagctttggcgtgatgcttctggagatcat 9109361
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| ||||| || ||||||||
Sbjct: 22281129 gtctacagcttcggcgtcgtgctggtgcagctcatc 22281094
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||||||||| |||||||||||
Sbjct: 27146567 gcgatgtgtacagcttcggcgtggtgctcgtggagctcatc 27146607
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 13705781 gcgatgtgtacagcttcggggtggttcttctagagctcat 13705820
Score = 40.1 bits (20), Expect = 3.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| ||||| || ||||||||
Sbjct: 22600944 gtctacagcttcggcgtcgtgctggtgcagctcatc 22600909
>ref|NT_107138.1| Oryza sativa (japonica cultivar-group)
Length = 386419
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcacgaggagaaggg 776
||||| ||||||||||||||| || || ||||| |||||||||||||| ||| |||||
Sbjct: 352544 tggagagcgatgtctacagctatggggtcgtgctcctggagctcatcacccggaaaaggg 352485
Query: 777 cca 779
|||
Sbjct: 352484 cca 352482
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 77547 agagaccaaccatggcggaggtggtcgaggagcttaagc 77585
Score = 48.1 bits (24), Expect = 0.013
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 548 catggagacatcaagccttccaacatcctccttgacgatgacctcaatccaaaagtctct 607
|||||||| ||||||| |||||||||||||||| || |||| || || || ||||||
Sbjct: 352701 catggagatgtcaagccagccaacatcctccttgatgacaacctgaaccctaaggtctct 352642
Query: 608 gactttgg 615
||||||||
Sbjct: 352641 gactttgg 352634
Score = 48.1 bits (24), Expect = 0.013
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 568 caacatcctccttgacgatgacctcaatccaaaagtctctgactttgg 615
|||||| ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 238876 caacattctcctagatgatgacttcaagccaaaagtctcagactttgg 238923
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 34173 gagaggcccaccatggcagaggtgctggaggagcttaagc 34212
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 989 accatggcagaggttgtcgaggagcttaagc 1019
|||||||| ||||| ||||||||||||||||
Sbjct: 352290 accatggcggaggtcgtcgaggagcttaagc 352260
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 135235 agagaccaaccatggcggatgttgtcaaggagcttaagc 135273
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 77051 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 77109
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 360157 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 360108
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 33681 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 33740
Query: 521 ca 522
||
Sbjct: 33741 ca 33742
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 134989 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 135037
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 33822 gtctctgactttgggtcctccaag 33845
>gb|AACV01023423.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023423, whole
genome shotgun sequence
Length = 27958
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 21727 agagaccaaccatggcggaggtggtcgaggagcttaagc 21689
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 22223 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 22165
>gb|AACV01025949.1| Oryza sativa (japonica cultivar-group) Ctg025949, whole genome shotgun
sequence
Length = 14767
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcacgaggagaaggg 776
||||| ||||||||||||||| || || ||||| |||||||||||||| ||| |||||
Sbjct: 12839 tggagagcgatgtctacagctatggggtcgtgctcctggagctcatcacccggaaaaggg 12780
Query: 777 cca 779
|||
Sbjct: 12779 cca 12777
Score = 48.1 bits (24), Expect = 0.013
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 548 catggagacatcaagccttccaacatcctccttgacgatgacctcaatccaaaagtctct 607
|||||||| ||||||| |||||||||||||||| || |||| || || || ||||||
Sbjct: 12996 catggagatgtcaagccagccaacatcctccttgatgacaacctgaaccctaaggtctct 12937
Query: 608 gactttgg 615
||||||||
Sbjct: 12936 gactttgg 12929
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 989 accatggcagaggttgtcgaggagcttaagc 1019
|||||||| ||||| ||||||||||||||||
Sbjct: 12585 accatggcggaggtcgtcgaggagcttaagc 12555
>gb|CH401371.1| Oryza sativa (japonica cultivar-group) scaffold000246 genomic
scaffold, whole genome shotgun sequence
Length = 21391
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcacgaggagaaggg 776
||||| ||||||||||||||| || || ||||| |||||||||||||| ||| |||||
Sbjct: 1929 tggagagcgatgtctacagctatggggtcgtgctcctggagctcatcacccggaaaaggg 1988
Query: 777 cca 779
|||
Sbjct: 1989 cca 1991
Score = 48.1 bits (24), Expect = 0.013
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 548 catggagacatcaagccttccaacatcctccttgacgatgacctcaatccaaaagtctct 607
|||||||| ||||||| |||||||||||||||| || |||| || || || ||||||
Sbjct: 1772 catggagatgtcaagccagccaacatcctccttgatgacaacctgaaccctaaggtctct 1831
Query: 608 gactttgg 615
||||||||
Sbjct: 1832 gactttgg 1839
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 17962 agagaccaaccatggcggatgttgtcaaggagcttaagc 18000
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 989 accatggcagaggttgtcgaggagcttaagc 1019
|||||||| ||||| ||||||||||||||||
Sbjct: 2183 accatggcggaggtcgtcgaggagcttaagc 2213
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 17716 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 17764
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 3146363 agagaccaaccatggcggaggtggtcgaggagcttaagc 3146401
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 3145867 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 3145925
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 17311345 agagaccaaccatggcggaggtggtcgaggagcttaagc 17311383
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 19862986 gagaggcccaccatggcagaggtgctggaggagcttaagc 19862947
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 6069657 tacagcttcggggtggtgctcctggagctcat 6069626
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 21597706 gacatcaagccgtccaacatcctcctggacg 21597736
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 17310849 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 17310907
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 6619928 gcgatgtctacagctatggagtggtcctcctggagctcatcac 6619970
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| || |||||||||||
Sbjct: 6511752 tacagcttcggcgtcgtgctgctcgagctcatcac 6511718
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 6501396 tacagcttcggcgtcgtgctgctggagctcgtcac 6501362
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 21580852 gacatcaagccgtccaacatcctcct 21580827
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 19863478 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 19863419
Query: 521 ca 522
||
Sbjct: 19863418 ca 19863417
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 21584688 gatgtctacagcttcggcgttgtgatgctggag 21584720
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacga 585
||||||||||| ||||||||||| || |||||
Sbjct: 21562456 gacatcaagccgtccaacatcctgctcgacga 21562487
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 19863337 gtctctgactttgggtcctccaag 19863314
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcacgaggagaaggg 776
||||| ||||||||||||||| || || ||||| |||||||||||||| ||| |||||
Sbjct: 27745757 tggagagcgatgtctacagctatggggtcgtgctcctggagctcatcacccggaaaaggg 27745816
Query: 777 cca 779
|||
Sbjct: 27745817 cca 27745819
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 27541420 agagaccaaccatggcggaggtggtcgaggagcttaagc 27541458
Score = 48.1 bits (24), Expect = 0.013
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 548 catggagacatcaagccttccaacatcctccttgacgatgacctcaatccaaaagtctct 607
|||||||| ||||||| |||||||||||||||| || |||| || || || ||||||
Sbjct: 27745600 catggagatgtcaagccagccaacatcctccttgatgacaacctgaaccctaaggtctct 27745659
Query: 608 gactttgg 615
||||||||
Sbjct: 27745660 gactttgg 27745667
Score = 48.1 bits (24), Expect = 0.013
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 568 caacatcctccttgacgatgacctcaatccaaaagtctctgactttgg 615
|||||| ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 27702749 caacattctcctagatgatgacttcaagccaaaagtctcagactttgg 27702796
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 27498046 gagaggcccaccatggcagaggtgctggaggagcttaagc 27498085
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 6305476 tacagcttcggggtggtgctcctggagctcat 6305445
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 989 accatggcagaggttgtcgaggagcttaagc 1019
|||||||| ||||| ||||||||||||||||
Sbjct: 27746011 accatggcggaggtcgtcgaggagcttaagc 27746041
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 27599108 agagaccaaccatggcggatgttgtcaaggagcttaagc 27599146
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 27540924 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 27540982
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 26066653 gacatcaagccgtccaacatcctcctggacg 26066683
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 7031606 gcgatgtctacagctatggagtggtcctcctggagctcatcac 7031648
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 6934369 tacagcttcggcgtcgtgctgctggagctcgtcac 6934335
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 27738144 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 27738193
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 27497554 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 27497613
Query: 521 ca 522
||
Sbjct: 27497614 ca 27497615
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 26010422 gacatcaagccgtccaacatcctcct 26010397
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 14162034 gtctacagcttcggcgtggtggtgctggag 14162063
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 27598862 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 27598910
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 26014258 gatgtctacagcttcggcgttgtgatgctggag 26014290
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 27497695 gtctctgactttgggtcctccaag 27497718
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacga 585
||||||||||| ||||||||||| || |||||
Sbjct: 26049372 gacatcaagccgtccaacatcctgctcgacga 26049403
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0059H21 map R3342S, complete sequence
Length = 133790
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcacgaggagaaggg 776
||||| ||||||||||||||| || || ||||| |||||||||||||| ||| |||||
Sbjct: 99915 tggagagcgatgtctacagctatggggtcgtgctcctggagctcatcacccggaaaaggg 99856
Query: 777 cca 779
|||
Sbjct: 99855 cca 99853
Score = 48.1 bits (24), Expect = 0.013
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 548 catggagacatcaagccttccaacatcctccttgacgatgacctcaatccaaaagtctct 607
|||||||| ||||||| |||||||||||||||| || |||| || || || ||||||
Sbjct: 100072 catggagatgtcaagccagccaacatcctccttgatgacaacctgaaccctaaggtctct 100013
Query: 608 gactttgg 615
||||||||
Sbjct: 100012 gactttgg 100005
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 989 accatggcagaggttgtcgaggagcttaagc 1019
|||||||| ||||| ||||||||||||||||
Sbjct: 99661 accatggcggaggtcgtcgaggagcttaagc 99631
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 107528 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 107479
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0036K13 map near R3342S, complete sequence
Length = 135684
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 77547 agagaccaaccatggcggaggtggtcgaggagcttaagc 77585
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 34173 gagaggcccaccatggcagaggtgctggaggagcttaagc 34212
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 135235 agagaccaaccatggcggatgttgtcaaggagcttaagc 135273
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 77051 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 77109
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 33681 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 33740
Query: 521 ca 522
||
Sbjct: 33741 ca 33742
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 134989 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 135037
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 33822 gtctctgactttgggtcctccaag 33845
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 54.0 bits (27), Expect = 2e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcacgaggagaaggg 776
||||| ||||||||||||||| || || ||||| |||||||||||||| ||| |||||
Sbjct: 27769745 tggagagcgatgtctacagctatggggtcgtgctcctggagctcatcacccggaaaaggg 27769804
Query: 777 cca 779
|||
Sbjct: 27769805 cca 27769807
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 27565408 agagaccaaccatggcggaggtggtcgaggagcttaagc 27565446
Score = 48.1 bits (24), Expect = 0.013
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 548 catggagacatcaagccttccaacatcctccttgacgatgacctcaatccaaaagtctct 607
|||||||| ||||||| |||||||||||||||| || |||| || || || ||||||
Sbjct: 27769588 catggagatgtcaagccagccaacatcctccttgatgacaacctgaaccctaaggtctct 27769647
Query: 608 gactttgg 615
||||||||
Sbjct: 27769648 gactttgg 27769655
Score = 48.1 bits (24), Expect = 0.013
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 568 caacatcctccttgacgatgacctcaatccaaaagtctctgactttgg 615
|||||| ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 27726737 caacattctcctagatgatgacttcaagccaaaagtctcagactttgg 27726784
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 27522034 gagaggcccaccatggcagaggtgctggaggagcttaagc 27522073
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 6371943 tacagcttcggggtggtgctcctggagctcat 6371912
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 989 accatggcagaggttgtcgaggagcttaagc 1019
|||||||| ||||| ||||||||||||||||
Sbjct: 27769999 accatggcggaggtcgtcgaggagcttaagc 27770029
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 27623096 agagaccaaccatggcggatgttgtcaaggagcttaagc 27623134
Score = 46.1 bits (23), Expect = 0.050
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacat 519
||||||||| || | || || ||||||||||| ||||||||||| ||| || |||||||
Sbjct: 27564912 ctctcgctgtcgcaacgccttgacatcgccatcggctccgcggaggctctctcctacat 27564970
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 26385349 gacatcaagccgtccaacatcctcctggacg 26385379
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 7098073 gcgatgtctacagctatggagtggtcctcctggagctcatcac 7098115
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 7000836 tacagcttcggcgtcgtgctgctggagctcgtcac 7000802
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 27762132 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 27762181
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 27521542 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 27521601
Query: 521 ca 522
||
Sbjct: 27521602 ca 27521603
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 26329118 gacatcaagccgtccaacatcctcct 26329093
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 14244036 gtctacagcttcggcgtggtggtgctggag 14244065
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 27622850 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 27622898
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 26332954 gatgtctacagcttcggcgttgtgatgctggag 26332986
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 27521683 gtctctgactttgggtcctccaag 27521706
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacga 585
||||||||||| ||||||||||| || |||||
Sbjct: 26368068 gacatcaagccgtccaacatcctgctcgacga 26368099
>gb|AQ289403.1|AQ289403 nbxb0035C17r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0035C17r, DNA sequence
Length = 674
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 316 cgatgtgtacagcttcggcgtggtgctcctggag 283
>gb|CZ557857.1|CZ557857 M0036359 AS_TRIM_TDNA_B1 Oryza sativa (japonica cultivar-group)
genomic clone M0036359, DNA sequence
Length = 566
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 174 gtctacagcttcggcgtcgtgctcctcgagctcatcac 211
>dbj|AK065898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049J16, full
insert sequence
Length = 2673
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 2186 cgatgtgtacagcttcggcgtggtgctcctggag 2219
>dbj|AK107147.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-D10, full
insert sequence
Length = 1286
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 742 gtctacagcttcggcgtcgtgctcctcgagctcatcac 779
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 101075
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 42645 cgatgtgtacagcttcggcgtggtgctcctggag 42678
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 149022
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 138756 cgatgtgtacagcttcggcgtggtgctcctggag 138789
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1149_C12
Length = 120743
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 111635 gtctacagcttcggcgtcgtgctcctcgagctcatcac 111672
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1282_E10
Length = 107284
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 31466 gtctacagcttcggcgtcgtgctcctcgagctcatcac 31503
>ref|NT_079837.2| Oryza sativa (japonica cultivar-group)
Length = 3671013
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 3150644 cgatgtgtacagcttcggcgtggtgctcctggag 3150677
Score = 42.1 bits (21), Expect = 0.77
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 401 gagtttgtcgccaatggaagc 421
|||||||||||||||||||||
Sbjct: 1090771 gagtttgtcgccaatggaagc 1090751
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
genome shotgun sequence
Length = 38041
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 25994 gtctacagcttcggcgtcgtgctcctcgagctcatcac 26031
>gb|AACV01017667.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017667, whole
genome shotgun sequence
Length = 19203
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 9689 gatgtctacagcttcggcgtgatgcttcttgagatcat 9726
>gb|AACV01025099.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025099, whole
genome shotgun sequence
Length = 16463
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 8192 cgatgtgtacagcttcggcgtggtgctcctggag 8159
>ref|XM_468561.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1286
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 742 gtctacagcttcggcgtcgtgctcctcgagctcatcac 779
>ref|XM_480822.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2400
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 2068 gatgtctacagcttcggcgtgatgcttcttgagatcat 2105
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
Length = 1785023
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 1676193 gtctacagcttcggcgtcgtgctcctcgagctcatcac 1676230
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0461A06
Length = 136384
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 50453 gatgtctacagcttcggcgtgatgcttcttgagatcat 50490
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 7745809 gatgtctacagcttcggcgtgatgcttcttgagatcat 7745846
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 17405827 tacagcttcggcgtggtgatgctggagctcctcac 17405793
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 10417263 cgatgtctacagcttcggcgtcgtgct 10417237
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 258938 gacatcaagccgtccaacatcctcctcgacg 258968
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 8044458 tctacagctttggcgtgatgcttctggagatcat 8044425
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 5720221 ctcaatccaaaaatctctgactttgg 5720246
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 259142 tacagcttcggcgtggtgctcctcgagct 259170
>gb|CH401281.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000118 genomic
scaffold, whole genome shotgun sequence
Length = 3660441
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctggag 757
|||||| |||||||||||||||||||| ||||||
Sbjct: 1610316 cgatgtgtacagcttcggcgtggtgctcctggag 1610349
>gb|CH401229.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000066 genomic
scaffold, whole genome shotgun sequence
Length = 2575203
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 2331816 gatgtctacagcttcggcgtgatgcttcttgagatcat 2331853
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 722571 ctcaatccaaaaatctctgactttgg 722596
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 22470103 gtctacagcttcggcgtcgtgctcctcgagctcatcac 22470140
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 11207626 tacagcttcggcgtcgtgctgctggagctcctcac 11207592
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
||||||||||| |||||||| ||||||||
Sbjct: 19573226 tacagcttcggggtggtgctgctggagct 19573198
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 7358519 gatgtctacagcttcggcgtgatgcttcttgagatcat 7358556
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 16466659 tacagcttcggcgtggtgatgctggagctcctcac 16466625
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 10037460 cgatgtctacagcttcggcgtcgtgct 10037434
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 491331 gacatcaagccgtccaacatcctcctcgacg 491361
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 5749274 ctcaatccaaaaatctctgactttgg 5749299
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 491535 tacagcttcggcgtggtgctcctcgagct 491563
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 35923167 gtctacagcttcggcgtcgtgctcctcgagctcatcac 35923204
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 24660690 tacagcttcggcgtcgtgctgctggagctcctcac 24660656
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 642814 tacagctacggcgtggtgctgatggagctcatcac 642780
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 568051 cagcttcggcgtggtcatcctggagctcatcacg 568018
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
||||||||||| |||||||| ||||||||
Sbjct: 33026290 tacagcttcggggtggtgctgctggagct 33026262
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 567 ccaacatcctccttgacgatgacct 591
||||||||||||| |||||||||||
Sbjct: 8071064 ccaacatcctcctcgacgatgacct 8071040
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 6948017 cgatgtctacagctttggtgtggtccttctgga 6948049
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 6931608 cgatgtctacagctttggtgtggtccttctgga 6931640
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||| ||||| || |||||||||||
Sbjct: 35840920 gtctacagcttcggcgtcgtgctcctcgagctcatcac 35840957
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 24881263 tacagcttcggcgtcgtgctgctggagctcctcac 24881229
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 637551 tacagctacggcgtggtgctgatggagctcatcac 637517
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 566681 cagcttcggcgtggtcatcctggagctcatcacg 566648
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
||||||||||| |||||||| ||||||||
Sbjct: 32934756 tacagcttcggggtggtgctgctggagct 32934728
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 567 ccaacatcctccttgacgatgacct 591
||||||||||||| |||||||||||
Sbjct: 7975673 ccaacatcctcctcgacgatgacct 7975649
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 6833525 cgatgtctacagctttggtgtggtccttctgga 6833557
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 6817120 cgatgtctacagctttggtgtggtccttctgga 6817152
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 52.0 bits (26), Expect = 8e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 7978283 gatgtctacagcttcggcgtgatgcttcttgagatcat 7978320
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 17643914 tacagcttcggcgtggtgatgctggagctcctcac 17643880
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 10649737 cgatgtctacagcttcggcgtcgtgct 10649711
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 492512 gacatcaagccgtccaacatcctcctcgacg 492542
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 8276932 tctacagctttggcgtgatgcttctggagatcat 8276899
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 5952695 ctcaatccaaaaatctctgactttgg 5952720
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 492716 tacagcttcggcgtggtgctcctcgagct 492744
>dbj|AK058286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E01, full
insert sequence
Length = 1638
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 820 gcgatgtctacagcttcggcgtgctgctgctcgagct 856
>dbj|AK070450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048N16, full
insert sequence
Length = 1720
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 1042 tctacagcttcggcgtcgtgctgctggagatcatcac 1078
>dbj|AK071309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085P06, full
insert sequence
Length = 1610
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 854 gcgatgtctacagcttcggcgtgctgctgctcgagct 890
>dbj|AK100639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110F08, full
insert sequence
Length = 1704
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 1043 tctacagcttcggcgtcgtgctgctggagatcatcac 1079
>dbj|AK104314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A08, full
insert sequence
Length = 1574
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 818 gcgatgtctacagcttcggcgtgctgctgctcgagct 854
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0090O10, complete sequence
Length = 162132
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 7194 gcgatgtctacagcttcggcgtgctgctgctcgagct 7158
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBb0005F16, complete sequence
Length = 160053
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 97530 gcgatgtctacagcttcggcgtgctgctgctcgagct 97494
>gb|AACV01002479.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002479, whole
genome shotgun sequence
Length = 10047
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 7502 tctacagcttcggcgtcgtgctgctggagatcatcac 7538
>gb|AACV01005757.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005757, whole
genome shotgun sequence
Length = 52670
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 11439 gcgatgtctacagcttcggcgtgctgctgctcgagct 11475
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 33569855 tctacagcttcggcgtcgtgctgctggagatcatcac 33569891
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 8123484 tacagctacggcgtggtgctgctggagctcctcac 8123450
Score = 42.1 bits (21), Expect = 0.77
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||| || || |||||||||||
Sbjct: 28557538 gcgatgtgtacagcttcggcgttgtcctggtggagctcatc 28557498
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
|||||||||||||||||||| | |||||||||
Sbjct: 1974851 tacagcttcggcgtggtgctcgtcgagctcatc 1974819
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||| || ||||||||||||||
Sbjct: 27568432 gatgtctacagctatggagtggtgcttctgga 27568401
>ref|NM_190856.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1404
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 995 tctacagcttcggcgtcgtgctgctggagatcatcac 1031
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 8017238 tctacagcttcggcgtcgtgctgctggagatcatcac 8017274
Score = 42.1 bits (21), Expect = 0.77
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||| || || |||||||||||
Sbjct: 3004921 gcgatgtgtacagcttcggcgttgtcctggtggagctcatc 3004881
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||| || ||||||||||||||
Sbjct: 2015815 gatgtctacagctatggagtggtgcttctgga 2015784
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 711647 gcgatgtctacagcttcggcgtgctgctgctcgagct 711611
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0557A01
Length = 147201
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 34382 tctacagcttcggcgtcgtgctgctggagatcatcac 34418
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010
genomic scaffold, whole genome shotgun sequence
Length = 13858245
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 713476 gcgatgtctacagcttcggcgtgctgctgctcgagct 713440
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 6746889 tctacagcttcggcgtgctgctgatggagctcatc 6746855
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
||||||||||| || ||||| ||||||||||||
Sbjct: 6788645 tacagcttcggggtagtgctactggagctcatc 6788613
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 735 gcttcggcgtggtgcttctggagct 759
|||||||||||||||| ||||||||
Sbjct: 4140923 gcttcggcgtggtgctgctggagct 4140947
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 7951661 tctacagcttcggcgtcgtgctgctggagatcatcac 7951697
Score = 42.1 bits (21), Expect = 0.77
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||| || || |||||||||||
Sbjct: 2939825 gcgatgtgtacagcttcggcgttgtcctggtggagctcatc 2939785
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||| || ||||||||||||||
Sbjct: 1956797 gatgtctacagctatggagtggtgcttctgga 1956766
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 905838 gcgatgtctacagcttcggcgtgctgctgctcgagct 905802
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 34142282 tacagcttcggcgtggtggtgctggagctcgtcac 34142316
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 6939251 tctacagcttcggcgtgctgctgatggagctcatc 6939217
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgt 744
||||||| |||||||||||||||||
Sbjct: 31294058 agtgcgacgtctacagcttcggcgt 31294082
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
||||||||||| || ||||| ||||||||||||
Sbjct: 6981007 tacagcttcggggtagtgctactggagctcatc 6980975
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 735 gcttcggcgtggtgcttctggagct 759
|||||||||||||||| ||||||||
Sbjct: 4333285 gcttcggcgtggtgctgctggagct 4333309
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 33153382 tctacagcttcggcgtcgtgctgctggagatcatcac 33153418
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 8176487 tacagctacggcgtggtgctgctggagctcctcac 8176453
Score = 42.1 bits (21), Expect = 0.77
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||| || || |||||||||||
Sbjct: 28141546 gcgatgtgtacagcttcggcgttgtcctggtggagctcatc 28141506
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
|||||||||||||||||||| | |||||||||
Sbjct: 2026461 tacagcttcggcgtggtgctcgtcgagctcatc 2026429
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||| || ||||||||||||||
Sbjct: 27158518 gatgtctacagctatggagtggtgcttctgga 27158487
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||| ||||| |||||| |||||||
Sbjct: 33489185 tctacagcttcggcgtcgtgctgctggagatcatcac 33489221
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 8125702 tacagctacggcgtggtgctgctggagctcctcac 8125668
Score = 42.1 bits (21), Expect = 0.77
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatc 763
||||||| |||||||||||||| || || |||||||||||
Sbjct: 28476868 gcgatgtgtacagcttcggcgttgtcctggtggagctcatc 28476828
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
|||||||||||||||||||| | |||||||||
Sbjct: 1977049 tacagcttcggcgtggtgctcgtcgagctcatc 1977017
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||| || ||||||||||||||
Sbjct: 27487762 gatgtctacagctatggagtggtgcttctgga 27487731
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 711647 gcgatgtctacagcttcggcgtgctgctgctcgagct 711611
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 33247036 tacagcttcggcgtggtggtgctggagctcgtcac 33247070
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 6731579 tctacagcttcggcgtgctgctgatggagctcatc 6731545
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgt 744
||||||| |||||||||||||||||
Sbjct: 30443454 agtgcgacgtctacagcttcggcgt 30443478
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
||||||||||| || ||||| ||||||||||||
Sbjct: 6772767 tacagcttcggggtagtgctactggagctcatc 6772735
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 735 gcttcggcgtggtgcttctggagct 759
|||||||||||||||| ||||||||
Sbjct: 4160141 gcttcggcgtggtgctgctggagct 4160165
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||||||||| |||| || |||||
Sbjct: 711649 gcgatgtctacagcttcggcgtgctgctgctcgagct 711613
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 33156526 tacagcttcggcgtggtggtgctggagctcgtcac 33156560
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 6732366 tctacagcttcggcgtgctgctgatggagctcatc 6732332
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgt 744
||||||| |||||||||||||||||
Sbjct: 30352032 agtgcgacgtctacagcttcggcgt 30352056
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
||||||||||| || ||||| ||||||||||||
Sbjct: 6773554 tacagcttcggggtagtgctactggagctcatc 6773522
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 735 gcttcggcgtggtgcttctggagct 759
|||||||||||||||| ||||||||
Sbjct: 4160032 gcttcggcgtggtgctgctggagct 4160056
>dbj|AK070624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J22, full
insert sequence
Length = 3313
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 2552 gcgatgtgtacagcttcggggtggttcttctagagctcat 2591
>dbj|AK104711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F07, full
insert sequence
Length = 1259
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 510 gcgatgtgtacagcttcggggtggttcttctagagctcat 549
>dbj|AK106421.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B03, full
insert sequence
Length = 1395
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 907 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 950
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0052C03, complete sequence
Length = 157178
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 88754 tacagcttcggggtggtgctcctggagctcat 88723
>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01,
complete sequence
Length = 143263
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 76840 gcgatgtgtacagcttcggggtggttcttctagagctcat 76879
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
complete sequence
Length = 138677
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 134922 gcgatgtgtacagcttcggggtggttcttctagagctcat 134961
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1200_C08
Length = 106214
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 75264 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 75307
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1150_E04
Length = 130973
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 62425 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 62468
>ref|NT_107144.1| Oryza sativa (japonica cultivar-group)
Length = 965832
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 88754 tacagcttcggggtggtgctcctggagctcat 88723
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 814884 gcgatgtctacagctatggagtggtcctcctggagctcatcac 814926
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 717647 tacagcttcggcgtcgtgctgctggagctcgtcac 717613
>gb|AACV01011682.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011682, whole
genome shotgun sequence
Length = 6270
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 1395 gcgatgtgtacagcttcggggtggttcttctagagctcat 1356
>gb|AACV01017045.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017045, whole
genome shotgun sequence
Length = 18063
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 9647 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 9604
>gb|AACV01022625.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022625, whole
genome shotgun sequence
Length = 15068
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 11110 tacagcttcggggtggtgctcctggagctcat 11141
>gb|AACV01023611.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023611, whole
genome shotgun sequence
Length = 3818
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 2689 gagaggcccaccatggcagaggtgctggaggagcttaagc 2728
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 2197 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 2256
Query: 521 ca 522
||
Sbjct: 2257 ca 2258
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 2338 gtctctgactttgggtcctccaag 2361
>gb|AACV01027916.1| Oryza sativa (japonica cultivar-group) Ctg027916, whole genome
shotgun sequence
Length = 6686
Score = 48.1 bits (24), Expect = 0.013
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 568 caacatcctccttgacgatgacctcaatccaaaagtctctgactttgg 615
|||||| ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 3967 caacattctcctagatgatgacttcaagccaaaagtctcagactttgg 3920
>ref|XM_479597.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1062
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 821 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 864
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 1238937 gcgatgtgtacagcttcggggtggttcttctagagctcat 1238976
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 16740312 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 16740355
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 12818594 tacagcttcggcgtggtgctcctggag 12818620
>gb|CH401265.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000102
genomic scaffold, whole genome shotgun sequence
Length = 1659275
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 980 gagaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||||||| |||||||||||||| | |||||||||||||
Sbjct: 591496 gagaggcccaccatggcagaggtgctggaggagcttaagc 591457
Score = 44.1 bits (22), Expect = 0.20
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 461 ctctcgctgccggagcggctggacatcgccattggctccgcggaagctatcgcctacatg 520
||||||||||| || || || ||||| ||||| |||||||||| ||| | |||||||||
Sbjct: 591988 ctctcgctgccagaacgcctcgacattgccatcggctccgcggctgctcttgcctacatg 591929
Query: 521 ca 522
||
Sbjct: 591928 ca 591927
Score = 40.1 bits (20), Expect = 3.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 602 gtctctgactttggttcctccaag 625
|||||||||||||| |||||||||
Sbjct: 591847 gtctctgactttgggtcctccaag 591824
>gb|CH401258.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000095
genomic scaffold, whole genome shotgun sequence
Length = 1296659
Score = 48.1 bits (24), Expect = 0.013
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcat 762
||||||||||| |||||||| |||||||||||
Sbjct: 992016 tacagcttcggggtggtgctcctggagctcat 991985
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 14725731 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 14725774
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 10689279 tacagcttcggcgtggtgctcctggag 10689305
>gb|CH401204.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000041 genomic
scaffold, whole genome shotgun sequence
Length = 2540762
Score = 48.1 bits (24), Expect = 0.013
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcat 762
||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 1247473 gcgatgtgtacagcttcggggtggttcttctagagctcat 1247512
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 28125170 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 28125213
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 24088718 tacagcttcggcgtggtgctcctggag 24088744
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 1786977 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 1786935
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 7030956 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 7030919
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 7016238 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 7016201
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgt 744
||||||||||||||||||||
Sbjct: 419872 gatgtctacagcttcggcgt 419891
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 48.1 bits (24), Expect = 0.013
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcacg 766
|||| ||||||||||||||||| ||||| || |||||| |||||
Sbjct: 29127307 gcgacgtctacagcttcggcgtcgtgctgctcgagctcctcacg 29127350
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 25205589 tacagcttcggcgtggtgctcctggag 25205615
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 1845330 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 1845288
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 7143361 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 7143324
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgt 744
||||||||||||||||||||
Sbjct: 426854 gatgtctacagcttcggcgt 426873
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0004O15 map near R3342S, complete sequence
Length = 140142
Score = 48.1 bits (24), Expect = 0.013
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 568 caacatcctccttgacgatgacctcaatccaaaagtctctgactttgg 615
|||||| ||||| || |||||| |||| ||||||||||| ||||||||
Sbjct: 19224 caacattctcctagatgatgacttcaagccaaaagtctcagactttgg 19177
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 122865 agagaccaaccatggcggatgttgtcaaggagcttaagc 122827
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 123111 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 123063
>gb|AQ161274.1|AQ161274 nbxb0006L07f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0006L07f, DNA sequence
Length = 653
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 136 tacagcttcggcgtcgtgctgctggagctgatcac 102
>gb|AQ289986.1|AQ289986 nbxb0036K13f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0036K13f, DNA sequence
Length = 589
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 443 agagaccaaccatggcggatgttgtcaaggagcttaagc 405
>gb|C22548.1|C22548 C22548 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12066_2A, mRNA sequence
Length = 463
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 308 tacagcttcggcgtggtgctcctggag 334
>gb|C22549.1|C22549 C22549 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12066_3Z, mRNA sequence
Length = 472
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 283 tacagcttcggcgtggtgctcctggag 309
>gb|CB660294.1|CB660294 OSJNEd01O09.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01O09 3', mRNA sequence
Length = 849
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 503 agagaccaaccatggcggatgttgtcaaggagcttaagc 541
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 257 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 305
>gb|CB660295.1|CB660295 OSJNEd01O10.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01O10 5', mRNA sequence
Length = 806
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 349 agagaccaaccatggcggatgttgtcaaggagcttaagc 311
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 595 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 547
>gb|CB667205.1|CB667205 OSJNEd14G23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14G23 3', mRNA sequence
Length = 752
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 550 tacagctacggcgtggtgctgctggagctcctcac 516
>emb|AL607093.1|OSJN01002 Oryza sativa (japonica cultivar-group) chromosome 7 clone
OSJNBa0046C22, *** SEQUENCING IN PROGRESS ***
Length = 139381
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 623 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 581
>emb|AL607100.1|OSJN01008 Oryza sativa (japonica cultivar-group) chromosome 4 clone
OSJNBb0085L12, *** SEQUENCING IN PROGRESS ***
Length = 123721
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 21093 tacagcttcggcgtggtgatgctggagctcctcac 21059
>dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1154_D08,
*** SEQUENCING IN PROGRESS ***
Length = 108287
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 56793 tacagcttcggcgtggtgctcctggag 56767
>dbj|AP005005.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0513D05, ***
SEQUENCING IN PROGRESS ***
Length = 150597
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 81246 tacagctacggcgtggtgctgatggagctcatcac 81280
>dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0656G12, ***
SEQUENCING IN PROGRESS ***
Length = 154494
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 18225 tacagcttcggcgtcgtgctgctggagctcctcac 18191
>dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026J11, full
insert sequence
Length = 1586
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 1045 tacagctacggcgtggtgctgctggagctcctcac 1079
>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full
insert sequence
Length = 1817
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 1025 tacagcttcggcgtggtgctcctggag 1051
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full
insert sequence
Length = 3262
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 2665 tacagcttcggcgtggtgatgctggagctcctcac 2699
>dbj|AK072425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098M23, full
insert sequence
Length = 2497
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 1815 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 1857
>dbj|AK099661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066L14, full
insert sequence
Length = 2361
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 1725 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 1767
>dbj|AK101874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070G15, full
insert sequence
Length = 2408
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 1772 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 1814
>dbj|AK102100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083N01, full
insert sequence
Length = 3027
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 2466 cgatgtctacagcttcggcgtcgtgct 2492
>dbj|AK103263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124F01, full
insert sequence
Length = 1686
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 1030 tacagcttcggcgtcgtgctgctggagctgatcac 996
>dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A03, full
insert sequence
Length = 2627
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 2005 tacagcttcggcgtcgtgctgctggagctcgtcac 2039
>dbj|AK110271.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C10, full
insert sequence
Length = 3439
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 2902 tacagctacggcgtggtgctgatggagctcatcac 2936
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1118_F05
Length = 134247
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 77377 cgatgtctacagcttcggcgtcgtgct 77351
>dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D24, full
insert sequence
Length = 3492
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 2951 tacagcttcggcgtcgtgctgctggagctcgtcac 2985
>dbj|AK111596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N17, full
insert sequence
Length = 2516
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 1949 tacagcttcggcgtcgtgctgctggagctcctcac 1983
>dbj|AK121185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084P22, full
insert sequence
Length = 2394
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 1742 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 1784
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 121563
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 72075 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 72033
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 146686
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 47764 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 47722
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1705_C03
Length = 118339
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 29303 tacagcttcggcgtggtgatgctggagctcctcac 29269
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0436B06
Length = 148947
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 120564 tacagcttcggcgtggtgatgctggagctcctcac 120530
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
Length = 182756
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 89815 tacagctacggcgtggtgctgctggagctcctcac 89781
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
complete sequence
Length = 127946
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 117914 tctacagcttcggcgtgctgctgatggagctcatc 117880
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
sequence
Length = 144487
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 88029 tacagcttcggcgtggtggtgctggagctcgtcac 87995
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0007D08
Length = 183142
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 82472 gacatcaagccgtccaacatcctcctcgacg 82502
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 82676 tacagcttcggcgtggtgctcctcgagct 82704
>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBb0024E08, complete sequence
Length = 131946
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 90220 gacatcaagccgtccaacatcctcctggacg 90250
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 33989 gacatcaagccgtccaacatcctcct 33964
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 37825 gatgtctacagcttcggcgttgtgatgctggag 37857
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacga 585
||||||||||| ||||||||||| || |||||
Sbjct: 72939 gacatcaagccgtccaacatcctgctcgacga 72970
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1215B07
Length = 165957
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 42546 tacagcttcggcgtcgtgctgctggagctcctcac 42512
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0616D06
Length = 153800
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 22260 tacagcttcggcgtggtgctcctggag 22286
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1118_D07
Length = 131449
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 97549 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 97507
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0507H12
Length = 143030
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 49909 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 49867
>ref|NT_107135.1| Oryza sativa (japonica cultivar-group)
Length = 983661
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 941935 gacatcaagccgtccaacatcctcctggacg 941965
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 885704 gacatcaagccgtccaacatcctcct 885679
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 889540 gatgtctacagcttcggcgttgtgatgctggag 889572
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacga 585
||||||||||| ||||||||||| || |||||
Sbjct: 924654 gacatcaagccgtccaacatcctgctcgacga 924685
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0004G10
Length = 150379
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 122353 tacagctacggcgtggtgctgctggagctcctcac 122319
>gb|AACV01000574.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000574, whole
genome shotgun sequence
Length = 43743
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 39104 tacagctacggcgtggtgctgctggagctcctcac 39070
>gb|AACV01003191.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003191, whole
genome shotgun sequence
Length = 43959
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 24564 tacagctacggcgtggtgctgatggagctcatcac 24530
>gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004944, whole
genome shotgun sequence
Length = 38231
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 23165 tacagcttcggcgtcgtgctgctggagctcctcac 23199
>gb|AACV01006146.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006146, whole
genome shotgun sequence
Length = 9417
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 8300 tctacagcttcggcgtgctgctgatggagctcatc 8334
>gb|AACV01008110.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008110, whole
genome shotgun sequence
Length = 29445
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 19397 tacagcttcggcgtggtggtgctggagctcgtcac 19363
>gb|AACV01013012.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013012, whole
genome shotgun sequence
Length = 42705
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 4079 tacagcttcggcgtcgtgctgctggagctgatcac 4113
>gb|AACV01015127.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015127, whole
genome shotgun sequence
Length = 17939
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 4679 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 4721
>gb|AACV01016778.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016778, whole
genome shotgun sequence
Length = 6823
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 5135 tacagcttcggcgtggtgctcctggag 5161
>gb|AACV01017114.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017114, whole
genome shotgun sequence
Length = 31406
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 11475 gacatcaagccgtccaacatcctcctcgacg 11445
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 11271 tacagcttcggcgtggtgctcctcgagct 11243
>gb|AACV01017855.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017855, whole
genome shotgun sequence
Length = 37058
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 25858 cgatgtctacagcttcggcgtcgtgct 25884
>gb|AACV01018319.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018319, whole
genome shotgun sequence
Length = 25469
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 9737 tacagcttcggcgtggtgatgctggagctcctcac 9771
>gb|AACV01019678.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019678, whole
genome shotgun sequence
Length = 10208
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 4352 tacagcttcggcgtggtgctactggag 4326
>gb|AACV01022658.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022658, whole
genome shotgun sequence
Length = 2615
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 1642 tacagcttcggcgtcgtgctgctggagctcgtcac 1676
>gb|AACV01022660.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022660, whole
genome shotgun sequence
Length = 16426
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| || |||||||||||
Sbjct: 9588 tacagcttcggcgtcgtgctgctcgagctcatcac 9622
>gb|AACV01022664.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022664, whole
genome shotgun sequence
Length = 70963
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 46579 gcgatgtctacagctatggagtggtcctcctggagctcatcac 46621
>gb|AACV01023735.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023735, whole
genome shotgun sequence
Length = 26645
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 22152 gacatcaagccgtccaacatcctcctggacg 22122
>gb|AACV01025444.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025444, whole
genome shotgun sequence
Length = 15700
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
|||| ||||||||||||||||| || || || |||||||||||
Sbjct: 8276 gcgacgtctacagcttcggcgtcgtcctcctcgagctcatcac 8234
>gb|AACV01025950.1| Oryza sativa (japonica cultivar-group) Ctg025950, whole genome
shotgun sequence
Length = 5624
Score = 46.1 bits (23), Expect = 0.050
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 981 agaggccaaccatggcagaggttgtcgaggagcttaagc 1019
|||| ||||||||||| || |||||| ||||||||||||
Sbjct: 2195 agagaccaaccatggcggatgttgtcaaggagcttaagc 2233
Score = 42.1 bits (21), Expect = 0.77
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 717 tggagtgcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||| |||||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 1949 tggagagcgatgtctatagttacggggtcgtgctcctggagctcatcac 1997
>gb|AACV01026452.1| Oryza sativa (japonica cultivar-group) Ctg026452, whole genome
shotgun sequence
Length = 13251
Score = 46.1 bits (23), Expect = 0.050
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 980 gagaggccaaccatggcagaggt 1002
|||||||||||||||||||||||
Sbjct: 4078 gagaggccaaccatggcagaggt 4100
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
clone:P0535G04
Length = 154180
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 91024 tacagcttcggcgtcgtgctgctggagctgatcac 91058
>ref|NM_187624.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1404
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 1043 tctacagcttcggcgtgctgctgatggagctcatc 1077
>ref|XM_463835.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3440
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 2902 tacagctacggcgtggtgctgatggagctcatcac 2936
>ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1308
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 994 tacagcttcggcgtggtggtgctggagctcgtcac 1028
>ref|XM_476541.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3072
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 2636 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 2678
>ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1816
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 1024 tacagcttcggcgtggtgctcctggag 1050
>ref|XM_479726.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3092
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 1932 gacatcaagccgtccaacatcctcctcgacg 1962
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 2136 tacagcttcggcgtggtgctcctcgagct 2164
>ref|XM_481215.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3027
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 2466 cgatgtctacagcttcggcgtcgtgct 2492
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3262
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 2665 tacagcttcggcgtggtgatgctggagctcctcac 2699
>ref|NT_107081.1| Oryza sativa (japonica cultivar-group)
Length = 2169725
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 1161164 tacagcttcggcgtggtgctactggag 1161190
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 46262 tacagcttcggcgtcgtgctgctggagctcctcac 46228
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
||||||||||| |||||||| ||||||||
Sbjct: 8099755 tacagcttcggggtggtgctgctggagct 8099727
>ref|NT_107187.1| Oryza sativa (japonica cultivar-group)
Length = 2541880
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 2335910 tacagcttcggcgtggtggtgctggagctcgtcac 2335944
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcatc 763
||||||||||||||||| |||| |||||||||||
Sbjct: 1895912 tctacagcttcggcgtgctgctgatggagctcatc 1895878
>ref|NM_188775.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1041
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 757 tacagctacggcgtggtgctgctggagctcctcac 791
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0501G04
Length = 156603
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 115604 tacagctacggcgtggtgctgatggagctcatcac 115570
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 44734 cagcttcggcgtggtcatcctggagctcatcacg 44701
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1104_G11
Length = 140093
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 65356 tacagcttcggcgtggtgctactggag 65382
>ref|XM_550622.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2265
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 1840 tacagcttcggcgtcgtgctgctggagctgatcac 1874
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 2195144 tacagcttcggcgtcgtgctgctggagctgatcac 2195178
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 8123324 tacagctacggcgtggtgctgctggagctcctcac 8123290
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
|||||||||||||||||||| | |||||||||
Sbjct: 1974851 tacagcttcggcgtggtgctcgtcgagctcatc 1974819
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 1801402 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 1801360
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 7099433 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 7099396
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgt 744
||||||||||||||||||||
Sbjct: 420791 gatgtctacagcttcggcgt 420810
>ref|NT_107175.1| Oryza sativa (japonica cultivar-group)
Length = 2882457
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 637551 tacagctacggcgtggtgctgatggagctcatcac 637517
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 566681 cagcttcggcgtggtcatcctggagctcatcacg 566648
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0034C11
Length = 139399
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 43420 tacagctacggcgtggtgctgctggagctcctcac 43386
>gb|CH401266.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000103
genomic scaffold, whole genome shotgun sequence
Length = 1217508
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 666841 gacatcaagccgtccaacatcctcctggacg 666871
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 649987 gacatcaagccgtccaacatcctcct 649962
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 653823 gatgtctacagcttcggcgttgtgatgctggag 653855
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacga 585
||||||||||| ||||||||||| || |||||
Sbjct: 631591 gacatcaagccgtccaacatcctgctcgacga 631622
>gb|CH401260.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000097
genomic scaffold, whole genome shotgun sequence
Length = 385661
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 235374 gcgatgtctacagctatggagtggtcctcctggagctcatcac 235416
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| || |||||||||||
Sbjct: 127198 tacagcttcggcgtcgtgctgctcgagctcatcac 127164
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 116842 tacagcttcggcgtcgtgctgctggagctcgtcac 116808
>gb|CH401241.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000078 genomic
scaffold, whole genome shotgun sequence
Length = 4067473
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 3885485 tacagcttcggcgtggtgctactggag 3885511
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 8864653 tacagcttcggcgtggtgatgctggagctcctcac 8864619
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgtggtgct 750
||||||||||||||||||||| |||||
Sbjct: 2435454 cgatgtctacagcttcggcgtcgtgct 2435428
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065
genomic scaffold, whole genome shotgun sequence
Length = 5026603
Score = 46.1 bits (23), Expect = 0.050
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctccttgacg 584
||||||||||| |||||||||||||| ||||
Sbjct: 491331 gacatcaagccgtccaacatcctcctcgacg 491361
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||||||||| || |||||
Sbjct: 491535 tacagcttcggcgtggtgctcctcgagct 491563
>gb|CH401219.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000056
genomic scaffold, whole genome shotgun sequence
Length = 1384745
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 355073 gcgatgtctacagcttcggtgttgtgctccttgagctgatcac 355031
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 2169997 tacagcttcggcgtcgtgctgctggagctgatcac 2170031
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||||||| | ||||||||| ||||
Sbjct: 6876119 tacagcttcggcgtggtggtgctggagctcgtcac 6876153
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 720 agtgcgatgtctacagcttcggcgt 744
||||||| |||||||||||||||||
Sbjct: 4027895 agtgcgacgtctacagcttcggcgt 4027919
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006
genomic scaffold, whole genome shotgun sequence
Length = 13452964
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| |||||||||||||
Sbjct: 642814 tacagctacggcgtggtgctgatggagctcatcac 642780
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 568051 cagcttcggcgtggtcatcctggagctcatcacg 568018
Score = 42.1 bits (21), Expect = 0.77
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 567 ccaacatcctccttgacgatgacct 591
||||||||||||| |||||||||||
Sbjct: 8071064 ccaacatcctcctcgacgatgacct 8071040
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 6948017 cgatgtctacagctttggtgtggtccttctgga 6948049
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 6931608 cgatgtctacagctttggtgtggtccttctgga 6931640
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
||||||| |||||||||||| ||||||||| ||||
Sbjct: 8176487 tacagctacggcgtggtgctgctggagctcctcac 8176453
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatc 763
|||||||||||||||||||| | |||||||||
Sbjct: 2026461 tacagcttcggcgtggtgctcgtcgagctcatc 2026429
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 9291723 tacagcttcggcgtggtgctactggag 9291749
Score = 42.1 bits (21), Expect = 0.77
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgt 744
|||||||||||||||||||||
Sbjct: 20366621 cgatgtctacagcttcggcgt 20366601
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||| ||||||| || |||||
Sbjct: 15836927 gtctacagcttcggcatggtgctgctcgagct 15836896
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgct 750
||||||||||||||||||||
Sbjct: 12820716 tacagcttcggcgtggtgct 12820697
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 2169997 tacagcttcggcgtcgtgctgctggagctgatcac 2170031
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 736 cttcggcgtggtgcttctggagctcatcac 765
||||||||| || |||||||||||||||||
Sbjct: 16089919 cttcggcgtcgtccttctggagctcatcac 16089948
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||| ||||| ||||||||
Sbjct: 27583594 tacagcttcggcgtcgtgctgctggagct 27583566
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttct 753
||||||||||||||||| ||||| |||||
Sbjct: 22452630 gatgtctacagcttcggagtggtccttct 22452602
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttct 753
|||||||||||||| || |||||||||||
Sbjct: 21104150 gatgtctacagctttggagtggtgcttct 21104178
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 734 agcttcggcgtggtgcttctggagctcatcac 765
|||||||| |||||||| |||||||||||||
Sbjct: 29085041 agcttcggtgtggtgctattggagctcatcac 29085010
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||| ||| | ||||||||
Sbjct: 20046196 gtctacagcttcggcgtcgtgttgctggagct 20046227
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| |||||||| |||||
Sbjct: 2231567 tacagcttcggcgtcgtgctgctggagctgatcac 2231601
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 736 cttcggcgtggtgcttctggagctcatcac 765
||||||||| || |||||||||||||||||
Sbjct: 16547382 cttcggcgtcgtccttctggagctcatcac 16547411
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||| ||||| ||||||||
Sbjct: 28484297 tacagcttcggcgtcgtgctgctggagct 28484269
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttct 753
||||||||||||||||| ||||| |||||
Sbjct: 23429286 gatgtctacagcttcggagtggtccttct 23429258
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 725 gatgtctacagcttcggcgtggtgcttct 753
|||||||||||||| || |||||||||||
Sbjct: 22006426 gatgtctacagctttggagtggtgcttct 22006454
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 734 agcttcggcgtggtgcttctggagctcatcac 765
|||||||| |||||||| |||||||||||||
Sbjct: 29954694 agcttcggtgtggtgctattggagctcatcac 29954663
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||||| ||| | ||||||||
Sbjct: 20910351 gtctacagcttcggcgtcgtgttgctggagct 20910382
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 46.1 bits (23), Expect = 0.050
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 731 tacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||||||
Sbjct: 10357651 tacagcttcggcgtggtgctactggag 10357677
Score = 42.1 bits (21), Expect = 0.77
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 724 cgatgtctacagcttcggcgt 744
|||||||||||||||||||||
Sbjct: 21460880 cgatgtctacagcttcggcgt 21460860
Score = 40.1 bits (20), Expect = 3.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggagct 759
||||||||||||||| ||||||| || |||||
Sbjct: 17038475 gtctacagcttcggcatggtgctgctcgagct 17038444
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgct 750
||||||||||||||||||||
Sbjct: 13953649 tacagcttcggcgtggtgct 13953630
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12,
complete sequence
Length = 166936
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 156864 gcgatgtctacagctatggagtggtcctcctggagctcatcac 156906
Score = 46.1 bits (23), Expect = 0.050
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagctcatcac 765
|||||||||||||| ||||| ||||||||| ||||
Sbjct: 59627 tacagcttcggcgtcgtgctgctggagctcgtcac 59593
>gb|AC146524.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0055H15, complete sequence
Length = 28312
Score = 46.1 bits (23), Expect = 0.050
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctcatcac 765
||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 1189 gcgatgtctacagctatggagtggtcctcctggagctcatcac 1231
>gb|CL300164.1|CL300164 INJA11_020_NIPP INJASNP_NIPP Oryza sativa (japonica cultivar-group)
genomic clone INJA11_020_NIPP, DNA sequence
Length = 413
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 228 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 277
>gb|CB649078.1|CB649078 OSJNEb12N03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12N03 5', mRNA sequence
Length = 787
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 574 ctcaatccaaaaatctctgactttgg 599
>gb|CB653996.1|CB653996 OSJNEc05I12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05I12 3', mRNA sequence
Length = 733
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 432 gtctacagcttcggcgtggtggtgctggag 403
>gb|CB659759.1|CB659759 OSJNEd01A01.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01A01 3', mRNA sequence
Length = 692
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 128 ctcaatccaaaaatctctgactttgg 103
>gb|CB659947.1|CB659947 OSJNEd01E23.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01E23 3', mRNA sequence
Length = 904
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 235 ctcaatccaaaaatctctgactttgg 210
>gb|CB660564.1|CB660564 OSJNEd02H18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02H18 5', mRNA sequence
Length = 496
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 293 ctcaatccaaaaatctctgactttgg 318
>gb|CB661236.1|CB661236 OSJNEd03N11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd03N11 3', mRNA sequence
Length = 834
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 235 ctcaatccaaaaatctctgactttgg 210
>gb|CB663660.1|CB663660 OSJNEd08O09.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08O09 3', mRNA sequence
Length = 864
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 235 ctcaatccaaaaatctctgactttgg 210
>gb|CB666572.1|CB666572 OSJNEd13I11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13I11 3', mRNA sequence
Length = 905
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 235 ctcaatccaaaaatctctgactttgg 210
>gb|CB666574.1|CB666574 OSJNEd13I12.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13I12 3', mRNA sequence
Length = 655
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 182 ctcaatccaaaaatctctgactttgg 157
>gb|CB666648.1|CB666648 OSJNEd13K02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd13K02 3', mRNA sequence
Length = 852
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 236 ctcaatccaaaaatctctgactttgg 211
>gb|CB667837.1|CB667837 OSJNEd15F21.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15F21 3', mRNA sequence
Length = 870
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 233 ctcaatccaaaaatctctgactttgg 208
>gb|CB667886.1|CB667886 OSJNEd15H01.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15H01 3', mRNA sequence
Length = 860
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 231 ctcaatccaaaaatctctgactttgg 206
>gb|CB667925.1|CB667925 OSJNEd15I01.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15I01 3', mRNA sequence
Length = 830
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 235 ctcaatccaaaaatctctgactttgg 210
>gb|CB670952.1|CB670952 OSJNEe04E16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E16 3', mRNA sequence
Length = 879
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 235 ctcaatccaaaaatctctgactttgg 210
>gb|CF326454.1|CF326454 JMT1--06-B18.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--06-B18, mRNA sequence
Length = 629
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 132 cagcttcggcgtggtcatcctggagctcatcacg 165
>gb|CV723774.1|CV723774 root--04-L16.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--04-L16, mRNA sequence
Length = 476
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 52 gacatcaagccgtccaacatcctcct 77
>gb|CX728029.1|CX728029 OSJNEd02H18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02H18 3', mRNA sequence
Length = 483
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 192 ctcaatccaaaaatctctgactttgg 167
>dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E02, full
insert sequence
Length = 1914
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 1412 cagcttcggcgtggtcatcctggagctcatcacg 1445
>dbj|AK069727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K11, full
insert sequence
Length = 1940
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 1349 cagcttcggcgtggtcatcctggagctcatcacg 1382
>dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C19, full
insert sequence
Length = 2846
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 2362 gtctacagcttcggcgtggtggtgctggag 2391
>dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A22, full
insert sequence
Length = 2277
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 1685 cagcttcggcgtggtcatcctggagctcatcacg 1718
>dbj|AK120351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M07, full
insert sequence
Length = 4665
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 3726 ctcaatccaaaaatctctgactttgg 3751
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1449_H02
Length = 117860
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 109614 tctacagctttggcgtgatgcttctggagatcat 109581
>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1114_D06
Length = 107621
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 45798 ctcaatccaaaaatctctgactttgg 45823
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0682A06
Length = 142023
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 17041 tctacagctttggcgtgatgcttctggagatcat 17008
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0066H10
Length = 200968
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 170050 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 170013
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1014_H11
Length = 122464
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 3507 ctcaatccaaaaatctctgactttgg 3532
>ref|NT_079878.2| Oryza sativa (japonica cultivar-group)
Length = 2996370
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 736 cttcggcgtggtgcttctggagctcatcac 765
||||||||| || |||||||||||||||||
Sbjct: 1279904 cttcggcgtcgtccttctggagctcatcac 1279933
>ref|NT_107124.1| Oryza sativa (japonica cultivar-group)
Length = 867134
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 399593 gtctacagcttcggcgtggtggtgctggag 399622
>gb|AACV01003186.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003186, whole
genome shotgun sequence
Length = 19325
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 3966 cagcttcggcgtggtcatcctggagctcatcacg 3999
>gb|AACV01008640.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008640, whole
genome shotgun sequence
Length = 32847
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 13556 gtctacagcttcggcgtggtggtgctggag 13585
>gb|AACV01011332.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011332, whole
genome shotgun sequence
Length = 17036
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 10249 tctacagctttggcgtgatgcttctggagatcat 10282
>gb|AACV01014027.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014027, whole
genome shotgun sequence
Length = 59164
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 736 cttcggcgtggtgcttctggagctcatcac 765
||||||||| || |||||||||||||||||
Sbjct: 55814 cttcggcgtcgtccttctggagctcatcac 55785
>gb|AACV01015493.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015493,
whole genome shotgun sequence
Length = 1687
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 928 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 965
>gb|AACV01015494.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015494, whole
genome shotgun sequence
Length = 14795
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 1055 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 1092
>gb|AACV01017514.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017514, whole
genome shotgun sequence
Length = 36809
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 13896 ctcaatccaaaaatctctgactttgg 13871
>gb|AACV01023732.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023732, whole
genome shotgun sequence
Length = 12359
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 554 gacatcaagccttccaacatcctcct 579
||||||||||| ||||||||||||||
Sbjct: 5025 gacatcaagccgtccaacatcctcct 5050
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttctggag 757
|||||||||||||||||||| ||| | ||||||
Sbjct: 1189 gatgtctacagcttcggcgttgtgatgctggag 1157
>gb|AACV01026200.1| Oryza sativa (japonica cultivar-group) Ctg026200, whole genome
shotgun sequence
Length = 14993
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 9933 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 9982
>ref|NM_186680.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1983
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 1535 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 1572
>ref|XM_463824.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1941
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 1349 cagcttcggcgtggtcatcctggagctcatcacg 1382
>ref|XM_463825.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1914
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 1412 cagcttcggcgtggtcatcctggagctcatcacg 1445
>ref|XM_463826.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2277
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 733 cagcttcggcgtggtgcttctggagctcatcacg 766
||||||||||||||| | |||||||||||||||
Sbjct: 1685 cagcttcggcgtggtcatcctggagctcatcacg 1718
>ref|XM_480861.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2373
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 2060 tctacagctttggcgtgatgcttctggagatcat 2093
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0583E12
Length = 152449
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 736 cttcggcgtggtgcttctggagctcatcac 765
||||||||| || |||||||||||||||||
Sbjct: 43362 cttcggcgtcgtccttctggagctcatcac 43391
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0073I05
Length = 182291
Score = 44.1 bits (22), Expect = 0.20
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 590 ctcaatccaaaagtctctgactttgg 615
|||||||||||| |||||||||||||
Sbjct: 139805 ctcaatccaaaaatctctgactttgg 139830
>gb|CH401441.1| Oryza sativa (japonica cultivar-group) scaffold000381 genomic scaffold,
whole genome shotgun sequence
Length = 15797
Score = 44.1 bits (22), Expect = 0.20
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 476 cggctggacatcgccattggctccgcggaagctatcgcctacatgcactc 525
|||||||| || ||||||||||| ||| ||||| | |||||||||||||
Sbjct: 10737 cggctggatattgccattggctctgcgaaagctcttacctacatgcactc 10786
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058
genomic scaffold, whole genome shotgun sequence
Length = 3500188
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 977331 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 977294
Score = 44.1 bits (22), Expect = 0.20
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 723 gcgatgtctacagcttcggcgtggtgcttctggagctc 760
|||| ||||||||||||||||| ||||| || ||||||
Sbjct: 962613 gcgacgtctacagcttcggcgtcgtgctgctcgagctc 962576
>gb|CH401213.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000050 genomic
scaffold, whole genome shotgun sequence
Length = 1883777
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 736 cttcggcgtggtgcttctggagctcatcac 765
||||||||| || |||||||||||||||||
Sbjct: 1469280 cttcggcgtcgtccttctggagctcatcac 1469309
>gb|CH401195.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000032
genomic scaffold, whole genome shotgun sequence
Length = 1766531
Score = 44.1 bits (22), Expect = 0.20
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 729 tctacagcttcggcgtggtgcttctggagctcat 762
|||||||||| |||||| ||||||||||| ||||
Sbjct: 308051 tctacagctttggcgtgatgcttctggagatcat 308084
>gb|CH401184.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000021 genomic
scaffold, whole genome shotgun sequence
Length = 2817894
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 1828980 gtctacagcttcggcgtggtggtgctggag 1829009
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 3314885 gtctacagcttcggcgtggtggtgctggag 3314914
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
||||||||||||||| |||| ||||||||
Sbjct: 20130153 tacagcttcggcgtgctgctcctggagct 20130125
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||| ||||| ||||||||
Sbjct: 19013480 tacagcttcggcgtcgtgctgctggagct 19013452
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 731 tacagcttcggcgtggtgcttctggagct 759
|||||||||||||| ||||| ||||||||
Sbjct: 19011415 tacagcttcggcgtcgtgctgctggagct 19011387
Score = 40.1 bits (20), Expect = 3.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgt 744
||||||||||||||||||||
Sbjct: 11123767 gatgtctacagcttcggcgt 11123748
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0057F07 map near 50283S, complete sequence
Length = 139827
Score = 44.1 bits (22), Expect = 0.20
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 728 gtctacagcttcggcgtggtgcttctggag 757
||||||||||||||||||||| | ||||||
Sbjct: 84260 gtctacagcttcggcgtggtggtgctggag 84231
>gb|AQ328181.1|AQ328181 nbxb0042J15f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0042J15f, DNA sequence
Length = 741
Score = 42.1 bits (21), Expect = 0.77
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 724 cgatgtctacagcttcggcgtggtgcttctgga 756
||||||||||||||| || ||||| ||||||||
Sbjct: 459 cgatgtctacagctttggtgtggtccttctgga 491
>dbj|AG206681.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND5060_0_403_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND5060, genomic survey sequence
Length = 726
Score = 42.1 bits (21), Expect = 0.77
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 725 gatgtctacagcttcggcgtggtgcttct 753
||||||||||||||||| ||||| |||||
Sbjct: 269 gatgtctacagcttcggagtggtccttct 241
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,967,147
Number of Sequences: 438736
Number of extensions: 1967147
Number of successful extensions: 12728
Number of sequences better than 10.0: 406
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8692
Number of HSP's gapped (non-prelim): 4036
length of query: 1348
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1327
effective length of database: 2,791,206,460
effective search space: 3703930972420
effective search space used: 3703930972420
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)