BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.451
(1101 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA... 906 0.0
ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA 906 0.0
gb|CB679166.1|CB679166 OSJNEf02E21.f OSJNEf Oryza sativa (j... 882 0.0
dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA... 692 0.0
dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA... 692 0.0
ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA 692 0.0
gb|AU065242.1|AU065242 AU065242 Rice cDNA from immature lea... 682 0.0
gb|CB679167.1|CB679167 OSJNEf02E21.r OSJNEf Oryza sativa (j... 674 0.0
gb|CF339615.1|CF339615 RCL1--05-G14.g1 Regenerated callus l... 622 e-176
gb|C98119.1|C98119 C98119 Rice callus Oryza sativa (japonic... 563 e-158
gb|CF339669.1|CF339669 RCL1--05-J10.g1 Regenerated callus l... 553 e-155
gb|AU065314.1|AU065314 AU065314 Rice cDNA from immature lea... 547 e-153
gb|CB000647.1|CB000647 S345Q_E06 Rice cold stress germinati... 507 e-141
gb|CF277008.1|CF277008 14ETL--02-G03.b1 Rice etiolated leaf... 504 e-140
gb|CF281994.1|CF281994 14ETL--09-E21.b1 Rice etiolated leaf... 498 e-138
gb|CF277193.1|CF277193 14ETL--02-K06.b1 Rice etiolated leaf... 496 e-137
gb|CO435851.1|CO435851 OsMR917 5MT resistant rice mutant cD... 482 e-133
gb|CF280065.1|CF280065 14ETL--06-J14.b1 Rice etiolated leaf... 480 e-133
gb|AU065256.1|AU065256 AU065256 Rice cDNA from immature lea... 476 e-131
gb|CF339211.1|CF339211 RCL1--04-C09.g1 Regenerated callus l... 474 e-131
gb|D15194.1|D15194 RICC0241A Rice callus Oryza sativa (japo... 464 e-128
gb|CF280071.1|CF280071 14ETL--06-J17.b1 Rice etiolated leaf... 464 e-128
gb|CF304541.1|CF304541 ABF1--05-E08.g1 ABF3-overexpressing ... 464 e-128
gb|CV732114.1|CV732114 FLO--06-H04.b1 Rice flower lambda ph... 444 e-122
gb|D22814.1|D22814 RICC1417A Rice callus Oryza sativa (japo... 404 e-110
gb|C29131.1|C29131 C29131 Rice callus cDNA Oryza sativa (ja... 398 e-108
gb|CB000484.1|CB000484 S345Z_F07 Rice cold stress germinati... 396 e-107
gb|CF339319.1|CF339319 RCL1--04-H24.g1 Regenerated callus l... 394 e-107
gb|D46458.1|D46458 RICS11150A Rice green shoot Oryza sativa... 379 e-102
gb|AU032241.1|AU032241 AU032241 Rice root Oryza sativa (jap... 375 e-101
gb|CV722542.1|CV722542 YTPSP--01-L20.b1 TPSP-overexpression... 365 3e-098
dbj|AP003744.1| Oryza sativa (japonica cultivar-group) chro... 365 3e-098
gb|AACV01016813.1| Oryza sativa (japonica cultivar-group) c... 365 3e-098
dbj|AP004380.2| Oryza sativa (japonica cultivar-group) geno... 365 3e-098
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 365 3e-098
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 365 3e-098
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 365 3e-098
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 365 3e-098
gb|AU065198.1|AU065198 AU065198 Rice cDNA from immature lea... 347 8e-093
gb|AU172401.1|AU172401 AU172401 Rice callus (2001) Oryza sa... 345 3e-092
gb|CF294263.1|CF294263 30DGS--03-L17.g1 Rice leaf plasmid c... 339 2e-090
gb|AU225827.1|AU225827 AU225827 Oryza sativa Koshihikari pi... 337 8e-090
gb|CF338931.1|CF338931 RCL1--03-E04.g1 Regenerated callus l... 331 5e-088
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 311 4e-082
gb|AACV01006785.1| Oryza sativa (japonica cultivar-group) c... 311 4e-082
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 311 4e-082
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 311 4e-082
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 311 4e-082
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 311 4e-082
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 311 4e-082
gb|AU182156.1|AU182156 AU182156 Rice callus (2001) Oryza sa... 303 1e-079
gb|AU030417.1|AU030417 AU030417 Rice cDNA from immature lea... 297 7e-078
gb|AZ045976.1|AZ045976 nbeb0088B07f CUGI Rice BAC Library (... 295 3e-077
gb|AU068911.1|AU068911 AU068911 Rice callus Oryza sativa (j... 289 2e-075
gb|AU165940.1|AU165940 AU165940 Rice cDNA from immature lea... 281 4e-073
gb|CF294262.1|CF294262 30DGS--03-L17.b1 Rice leaf plasmid c... 281 4e-073
gb|D22862.1|D22862 RICC1646A Rice callus Oryza sativa (japo... 262 4e-067
gb|AU081510.1|AU081510 AU081510 Rice callus Oryza sativa (j... 258 6e-066
gb|D38828.1|D38828 RICC1228A Rice callus Oryza sativa (japo... 256 2e-065
gb|C27432.1|C27432 C27432 Rice callus cDNA Oryza sativa (ja... 256 2e-065
gb|D15504.1|D15504 RICC0731A Rice callus Oryza sativa (japo... 256 2e-065
gb|AU095370.1|AU095370 AU095370 Rice cDNA from immature lea... 256 2e-065
gb|AU173393.1|AU173393 AU173393 Rice root Oryza sativa (jap... 254 9e-065
gb|D41298.1|D41298 RICS3688A Rice shoot Oryza sativa (japon... 252 3e-064
gb|AU166837.1|AU166837 AU166837 Rice callus (2001) Oryza sa... 248 5e-063
gb|D15189.1|D15189 RICC0230A Rice callus Oryza sativa (japo... 244 9e-062
gb|D25013.1|D25013 RICR2938A Rice root Oryza sativa (japoni... 242 3e-061
gb|D22813.1|D22813 RICC1417B Rice callus Oryza sativa (japo... 236 2e-059
gb|CF293447.1|CF293447 30DGS--02-K06.g1 Rice leaf plasmid c... 236 2e-059
gb|CF280066.1|CF280066 14ETL--06-J14.g1 Rice etiolated leaf... 190 1e-045
gb|CF277194.1|CF277194 14ETL--02-K06.g1 Rice etiolated leaf... 184 7e-044
gb|CF281995.1|CF281995 14ETL--09-E21.g1 Rice etiolated leaf... 172 3e-040
gb|CF277009.1|CF277009 14ETL--02-G03.g1 Rice etiolated leaf... 147 1e-032
gb|CV732115.1|CV732115 FLO--06-H04.g1 Rice flower lambda ph... 147 1e-032
gb|AU108410.1|AU108410 AU108410 Rice shoot Oryza sativa (ja... 133 2e-028
gb|AU095210.1|AU095210 AU095210 Rice cDNA from immature lea... 131 9e-028
gb|CV734440.1|CV734440 FLO--09-M24.b1 Rice flower lambda ph... 131 9e-028
gb|AU165868.1|AU165868 AU165868 Rice cDNA from immature lea... 129 3e-027
gb|AU081509.1|AU081509 AU081509 Rice callus Oryza sativa (j... 125 5e-026
gb|D22542.1|D22542 RICC0241B Rice callus Oryza sativa (japo... 115 5e-023
gb|D22863.1|D22863 RICC1646B Rice callus Oryza sativa (japo... 107 1e-020
gb|AU093215.1|AU093215 AU093215 Rice callus Oryza sativa (j... 101 8e-019
dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
gb|AU184766.1|AU184766 AU184766 Rice root Oryza sativa (jap... 88 1e-014
gb|D23336.1|D23336 RICC2643A Rice callus Oryza sativa (japo... 74 2e-010
gb|CF280072.1|CF280072 14ETL--06-J17.g1 Rice etiolated leaf... 72 7e-010
gb|AU095192.1|AU095192 AU095192 Rice cDNA from immature lea... 66 4e-008
gb|CF339613.1|CF339613 RCL1--05-G12.g1 Regenerated callus l... 48 0.010
gb|AU173394.1|AU173394 AU173394 Rice root Oryza sativa (jap... 46 0.040
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full
insert sequence
Length = 1078
Score = 906 bits (457), Expect = 0.0
Identities = 739/833 (88%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 7 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 66
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 67 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 126
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 127 gccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagagga 186
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 187 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 246
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
||||||| || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |
Sbjct: 247 tcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggac 306
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatg 368
|||| || ||||| || || |||||||| || ||||||||||| |||||||||||| |||
Sbjct: 307 gtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatg 366
Query: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatca 428
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 367 gtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttatta 426
Query: 429 acttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagc 488
||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 427 acttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaagc 486
Query: 489 caaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaagg 548
| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 487 ccaggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttccaagg 546
Query: 549 atgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggca 608
|||||||||| ||||| || || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 547 atgatgatgtccgcaaatatgtcaacacctaccgcaggacattcactaccaagaatggca 606
Query: 609 agaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagagga 668
||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||||||
Sbjct: 607 agaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccagagga 666
Query: 669 agcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctgctg 728
||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||
Sbjct: 667 agcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggctgctg 726
Query: 729 agtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgagagct 788
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 727 agtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgagagct 786
Query: 789 tggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 787 tggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 839
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1077
Score = 906 bits (457), Expect = 0.0
Identities = 739/833 (88%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 6 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 65
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 66 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 125
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 126 gccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagagga 185
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 186 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 245
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
||||||| || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |
Sbjct: 246 tcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggac 305
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatg 368
|||| || ||||| || || |||||||| || ||||||||||| |||||||||||| |||
Sbjct: 306 gtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatg 365
Query: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatca 428
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 366 gtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttatta 425
Query: 429 acttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagc 488
||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 426 acttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaagc 485
Query: 489 caaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaagg 548
| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 486 ccaggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttccaagg 545
Query: 549 atgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggca 608
|||||||||| ||||| || || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 546 atgatgatgtccgcaaatatgtcaacacctaccgcaggacattcactaccaagaatggca 605
Query: 609 agaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagagga 668
||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||||||
Sbjct: 606 agaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccagagga 665
Query: 669 agcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctgctg 728
||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||
Sbjct: 666 agcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggctgctg 725
Query: 729 agtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgagagct 788
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 726 agtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgagagct 785
Query: 789 tggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 786 tggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 838
>gb|CB679166.1|CB679166 OSJNEf02E21.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02E21 5', mRNA sequence
Length = 791
Score = 882 bits (445), Expect = 0.0
Identities = 685/765 (89%)
Strand = Plus / Plus
Query: 71 gcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgc 130
|||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 26 gcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggtgc 85
Query: 131 caaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggata 190
|| |||||||| || |||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 86 cagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagaggatc 145
Query: 191 tcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatc 250
|| |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 146 tctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaagatc 205
Query: 251 atgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgt 310
||||| || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |||
Sbjct: 206 atggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggacgt 265
Query: 311 gttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggt 370
|| || ||||| || || |||||||| || ||||||||||| |||||||||||| |||||
Sbjct: 266 gtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatggt 325
Query: 371 gagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaac 430
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 326 gagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttattaac 385
Query: 431 ttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagcca 490
||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 386 ttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaagccc 445
Query: 491 aggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggat 550
||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 446 aggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttccaaggat 505
Query: 551 gatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggcaag 610
|||||||| ||||| || || ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 506 gatgatgtccgcaaatatgtcaacacctaccgcaggacattcactaccaagaatggcaag 565
Query: 611 aaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagaggaag 670
||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||||||||
Sbjct: 566 aaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccagaggaag 625
Query: 671 cgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctgctgag 730
||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||||
Sbjct: 626 cgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggctgctgag 685
Query: 731 taccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgagagcttg 790
|||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||
Sbjct: 686 taccagaagcttcttgcccagaggctcaaggagcagaaggaacgccggagcgagagcttg 745
Query: 791 gccaagaggaggtccaagctttctgccgccgccaaggcttctgct 835
|| ||||||||||||||||||||| | || ||||||||| |||||
Sbjct: 746 gcaaagaggaggtccaagctttcttctgctgccaaggctgctgct 790
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full
insert sequence
Length = 990
Score = 692 bits (349), Expect = 0.0
Identities = 634/729 (86%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 32 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 91
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 92 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 151
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 152 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 211
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 212 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 271
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 272 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 331
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 332 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 391
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 392 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 451
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagta 567
|||||| || |||||||| |||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 452 gagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagta 511
Query: 568 cgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacc 627
|| ||||| |||||||| || |||||||||||||||||||||||||| |||||||| ||
Sbjct: 512 tgtcaacacttaccgcagaaccttcactaccaagaacggcaagaaggttagcaaggctcc 571
Query: 628 taagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctga 687
||||||||| ||||||| || ||| |||| || ||||||||| | || |||||||| |
Sbjct: 572 taagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgccca 631
Query: 688 caagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgc 747
|||||| | || || | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 632 gaagaagcaaagaattgccaagaagaagtccgaggctgccgagtaccagaagctgcttgc 691
Query: 748 ccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtccaa 807
||||||||| ||||| |||||||| ||| |||| ||||||||||| ||||||||||||||
Sbjct: 692 ccagaggctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggaggtccaa 751
Query: 808 gctttctgc 816
|||||||||
Sbjct: 752 gctttctgc 760
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full
insert sequence
Length = 1018
Score = 692 bits (349), Expect = 0.0
Identities = 634/729 (86%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 33 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 92
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 93 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 152
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 153 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 212
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 213 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 272
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 273 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 332
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 333 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 392
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 393 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 452
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagta 567
|||||| || |||||||| |||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 453 gagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagta 512
Query: 568 cgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacc 627
|| ||||| |||||||| || |||||||||||||||||||||||||| |||||||| ||
Sbjct: 513 tgtcaacacttaccgcagaaccttcactaccaagaacggcaagaaggttagcaaggctcc 572
Query: 628 taagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctga 687
||||||||| ||||||| || ||| |||| || ||||||||| | || |||||||| |
Sbjct: 573 taagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgccca 632
Query: 688 caagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgc 747
|||||| | || || | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 633 gaagaagcaaagaattgccaagaagaagtccgaggctgccgagtaccagaagctgcttgc 692
Query: 748 ccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtccaa 807
||||||||| ||||| |||||||| ||| |||| ||||||||||| ||||||||||||||
Sbjct: 693 ccagaggctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggaggtccaa 752
Query: 808 gctttctgc 816
|||||||||
Sbjct: 753 gctttctgc 761
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 983
Score = 692 bits (349), Expect = 0.0
Identities = 634/729 (86%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 35 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 94
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 95 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 154
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 155 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 214
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 215 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 274
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 275 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 334
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 335 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 394
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 395 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 454
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagta 567
|||||| || |||||||| |||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 455 gagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagta 514
Query: 568 cgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacc 627
|| ||||| |||||||| || |||||||||||||||||||||||||| |||||||| ||
Sbjct: 515 tgtcaacacttaccgcagaaccttcactaccaagaacggcaagaaggttagcaaggctcc 574
Query: 628 taagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctga 687
||||||||| ||||||| || ||| |||| || ||||||||| | || |||||||| |
Sbjct: 575 taagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgccca 634
Query: 688 caagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgc 747
|||||| | || || | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 635 gaagaagcaaagaattgccaagaagaagtccgaggctgccgagtaccagaagctgcttgc 694
Query: 748 ccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtccaa 807
||||||||| ||||| |||||||| ||| |||| ||||||||||| ||||||||||||||
Sbjct: 695 ccagaggctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggaggtccaa 754
Query: 808 gctttctgc 816
|||||||||
Sbjct: 755 gctttctgc 763
>gb|AU065242.1|AU065242 AU065242 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60879_1A, mRNA sequence
Length = 713
Score = 682 bits (344), Expect = 0.0
Identities = 539/602 (89%), Gaps = 2/602 (0%)
Strand = Plus / Plus
Query: 236 tatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagtt 295
|||||||||||||||||||| || ||||||||||| || ||||| |||||||| |||||
Sbjct: 7 tatgtcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtg 66
Query: 296 ttgacttctggtcgtgttcgtcttctgctccataggggcactccctgcttccgtggttat 355
| ||| |||| ||||| || ||||| || || |||||||| || ||||||||||| |||
Sbjct: 67 ctcactgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtat 126
Query: 356 ggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagac 415
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 127 ggcaggcgtgatggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggac 186
Query: 416 ctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgact 475
||||||||||| |||||||||||||| ||||||||||||||||| |||||||| || |||
Sbjct: 187 ctatctgttattaacttggtgattgtcaagaagggtgagaatgacctgcctggccttact 246
Query: 476 gacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttc 535
|||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 247 gacactgagaagcccaggatgaggggacccaagagggcctccaagatcaggaagctcttc 306
Query: 536 aaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcact 595
|||||| ||||||||||||||| ||||| || || ||||| || |||||||||||||||
Sbjct: 307 aacctttccaaggatgatgatgtccgcaaatatgtcaacacctancgcaggacattcact 366
Query: 596 accaagaacggcaagaaggtcagc-aaggcacctaagatccaacggcttgtgacaccctt 654
|||||||| ||||||||||| ||| ||||| ||||||||||| || |||||||| ||| |
Sbjct: 367 accaagaatggcaagaaggtgagcaaaggctcctaagatccagcgtcttgtgactcccct 426
Query: 655 gaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaa 714
| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 427 cancctccagaggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaa 486
Query: 715 gtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacaga-gggacc 773
||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |
Sbjct: 487 gtcggaggctgctgagtaccagaagcttcttgcccagaggctcaaggagcagaggggaac 546
Query: 774 gccggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaaggcttctg 833
||||||||||||||||||| ||||||||||||||||||||| | || ||||||||| |||
Sbjct: 547 gccggagcgagagcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctg 606
Query: 834 ct 835
||
Sbjct: 607 ct 608
>gb|CB679167.1|CB679167 OSJNEf02E21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02E21 3', mRNA sequence
Length = 817
Score = 674 bits (340), Expect = 0.0
Identities = 534/596 (89%), Gaps = 2/596 (0%)
Strand = Plus / Minus
Query: 247 gatcatgggtggatgtgacaagcaaggctt-cccaatgaagcaaggagttttgacttctg 305
||||||||| || ||||||||||| || || ||| |||||||| ||||| | ||| |||
Sbjct: 817 gatcatggggggttgtgacaagcagggttttccctatgaagcagggagtgctcactgctg 758
Query: 306 gtcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgta 365
| ||||| || ||| | || || |||||||| || ||||||||||| ||||||||||||
Sbjct: 757 gacgtgtccg-ctttttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtg 699
Query: 366 atggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgtta 425
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 698 atggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgtta 639
Query: 426 tcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgaga 485
| |||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||
Sbjct: 638 ttaacttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgaga 579
Query: 486 agccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaaca 545
|||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||
Sbjct: 578 agcccaggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttcca 519
Query: 546 aggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacg 605
||||||||||||| ||||| || || ||||| |||||||||||||||||||||||||| |
Sbjct: 518 aggatgatgatgtccgcaaatatgtcaacacctaccgcaggacattcactaccaagaatg 459
Query: 606 gcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccaga 665
|||||||||| |||||||| ||||||||||| || |||||||| ||| | ||||||||||
Sbjct: 458 gcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccaga 399
Query: 666 ggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctg 725
|||||||||| |||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 398 ggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggctg 339
Query: 726 ctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgaga 785
||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 338 ctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgaga 279
Query: 786 gcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 278 gcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 223
>gb|CF339615.1|CF339615 RCL1--05-G14.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-G14, mRNA sequence
Length = 649
Score = 622 bits (314), Expect = e-176
Identities = 560/641 (87%), Gaps = 1/641 (0%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 9 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 68
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 69 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 128
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 129 gccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagagga 188
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 189 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 248
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
|| || || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |
Sbjct: 249 tctgggngggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggac 308
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatg 368
|||| || ||||| || || |||||||| || ||||||||||| |||||||||||| |||
Sbjct: 309 gtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatg 368
Query: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatca 428
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttatta 428
Query: 429 acttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagc 488
||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 429 acttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaagc 488
Query: 489 caaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaa-g 547
| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||| |
Sbjct: 489 ccaggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttccaagg 548
Query: 548 gatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggc 607
||||||||||| ||||| || || ||||| |||||||||||||||||||||||||| |||
Sbjct: 549 gatgatgatgtccgcaaatatgtcaacacctaccgcaggacattcactaccaagaatggc 608
Query: 608 aagaaggtcagcaaggcacctaagatccaacggcttgtgac 648
|||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 609 aagaaggtgagcaaggctcctaagatccagcgtcttgtgac 649
>gb|C98119.1|C98119 C98119 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0731_10Z, mRNA sequence
Length = 605
Score = 563 bits (284), Expect = e-158
Identities = 416/459 (90%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 383 aagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtg 442
||||||||||||||||| ||| | ||||| |||||||||||||| ||||||||||||||
Sbjct: 1 aagtctgtccgtggttgnatcttcagccaggacctatctgttattaacttggtgattgtc 60
Query: 443 aagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggt 502
||||||| ||||||||| |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 61 aagaaggttgagaatga-ctgcctggccttactgacactgagaagcccaggatgagggga 119
Query: 503 cccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgc 562
||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||
Sbjct: 120 cccaagagggcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgc 179
Query: 563 aagtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaag 622
|| || || ||||| |||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 180 aaatatgtcaacacctaccgcaggacattcactaccaagaatggcaagaaggtgagcaag 239
Query: 623 gcacctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatc 682
|| ||||||||||| || |||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 240 gctcctaagatccagcgtcttgtgactcccctcaccctccagaggaagcgtgccagaatc 299
Query: 683 gctgacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagctt 742
|||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 300 gctgacaagaagaagaggatcgccaagaagaagtcggaggctgctgagtaccagaagctt 359
Query: 743 cttgcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggagg 802
|||||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 360 cttgcccagaggctcaaggagcagagggaacgccggagcgagagcttggcaaagaggagg 419
Query: 803 tccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||||||| | || ||||||||| ||||| |||||
Sbjct: 420 tccaagctttcttctgctgccaaggctgctgctaccacc 458
>gb|CF339669.1|CF339669 RCL1--05-J10.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-J10, mRNA sequence
Length = 583
Score = 553 bits (279), Expect = e-155
Identities = 502/575 (87%), Gaps = 1/575 (0%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 9 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 68
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 69 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 128
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 129 gccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagagga 188
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 189 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 248
Query: 249 tcatgggtggat-gtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggt 307
||||||| || | |||||||||| || ||||| |||||||| ||||| | ||| ||||
Sbjct: 249 tcatgggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctgga 308
Query: 308 cgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaat 367
||||| || ||||| || || |||||||| || ||||||||||| |||||||||||| ||
Sbjct: 309 cgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgat 368
Query: 368 ggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatc 427
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 369 ggtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttatt 428
Query: 428 aacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaag 487
|||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 429 aacttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaag 488
Query: 488 ccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaag 547
|| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 489 cccaggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttccaag 548
Query: 548 gatgatgatgtacgcaagtacgtgaacacataccg 582
||||||||||| ||||| || || ||||| |||||
Sbjct: 549 gatgatgatgtccgcaaatatgtcaacacctaccg 583
>gb|AU065314.1|AU065314 AU065314 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61569_1A, mRNA sequence
Length = 709
Score = 547 bits (276), Expect = e-153
Identities = 518/598 (86%), Gaps = 1/598 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 17 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 76
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 77 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 136
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 137 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 196
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 197 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 256
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 257 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 316
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 317 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 376
Query: 448 gggtgagaatgatctgcctgg-tctgactgacactgagaagccaaggatgaggggtccca 506
|||||| ||||| || ||||| | |||||||||||||||||| ||||||||||| ||||
Sbjct: 377 gggtgataatgaccttcctggcttggactgacactgagaagcccaggatgaggggaccca 436
Query: 507 agagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagt 566
||||||| || |||||||| |||||||| |||||| ||||||||||||||| |||||||
Sbjct: 437 agagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagt 496
Query: 567 acgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcac 626
| || ||||| || ||||| || ||||||||||||||||||||||| || |||||||| |
Sbjct: 497 atgtcaacacttancgcagaaccttcactaccaagaacggcaagaangttagcaaggctc 556
Query: 627 ctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgc 684
|||||||||| ||||||| || ||| |||| || ||||||||| | || ||||||||
Sbjct: 557 ctaagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgc 614
>gb|CB000647.1|CB000647 S345Q_E06 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 693
Score = 507 bits (256), Expect = e-141
Identities = 448/512 (87%)
Strand = Plus / Plus
Query: 323 ctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggagg 382
||||| ||||| || |||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 1 ctccacaggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaagg 60
Query: 383 aagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtg 442
||||| |||||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 61 aagtcagtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgta 120
Query: 443 aagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggt 502
||||||||||| ||||| || ||||| ||||||||||||||||||| |||||||||||
Sbjct: 121 aagaagggtgataatgaccttcctggcttgactgacactgagaagcccaggatgagggga 180
Query: 503 cccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgc 562
||||||||||| || |||||||| |||||||| |||||| ||||||||||||||| |||
Sbjct: 181 cccaagagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgc 240
Query: 563 aagtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaag 622
||||| || ||||| |||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 241 aagtatgtcaacacttaccgcagaaccttcactaccaagaacggcaagaaggttagcaag 300
Query: 623 gcacctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatc 682
|| ||||||||||| ||||||| || ||| |||| || ||||||||| | || ||||||
Sbjct: 301 gctcctaagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatc 360
Query: 683 gctgacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagctt 742
|| | |||||| | || || | ||||||||||| |||||||| ||||||||||||||
Sbjct: 361 gcccagaagaagcaaagaattgccaagaagaagtccgaggctgccgagtaccagaagctg 420
Query: 743 cttgcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggagg 802
|||||||||||||| ||||| |||||||| ||| |||| ||||||||||| |||||||||
Sbjct: 421 cttgcccagaggctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggagg 480
Query: 803 tccaagctttctgccgccgccaaggcttctgc 834
|||||||||||||| ||| |||||||| ||||
Sbjct: 481 tccaagctttctgctgccaccaaggctgctgc 512
>gb|CF277008.1|CF277008 14ETL--02-G03.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-G03, mRNA sequence
Length = 549
Score = 504 bits (254), Expect = e-140
Identities = 453/518 (87%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 32 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 91
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 92 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 151
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 152 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 211
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 212 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 271
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 272 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 331
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 332 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 391
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 392 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 451
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggat-gatgatgtacgcaagt 566
|||||| || ||||||||||||||||| |||||| ||||||| |||||||| |||||||
Sbjct: 452 gagggcatctaagatcagaaagctgtttaaccttgccaaggatggatgatgtccgcaagt 511
Query: 567 acgtgaacacataccgcaggacattcactaccaagaac 604
| || ||||| |||||||| || |||||||||||||||
Sbjct: 512 atgtcaacacttaccgcagaaccttcactaccaagaac 549
>gb|CF281994.1|CF281994 14ETL--09-E21.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-E21, mRNA sequence
Length = 572
Score = 498 bits (251), Expect = e-138
Identities = 453/519 (87%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 54 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 113
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 114 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 173
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 174 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 233
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 234 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 293
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 294 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 353
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 354 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 413
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 414 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 473
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatg-atgatgtacgcaagt 566
|||||| || |||||||| |||||||| |||||| |||||||| ||||||| |||||||
Sbjct: 474 gagggcatctaagatcaggaagctgtttaaccttgccaaggatgnatgatgtccgcaagt 533
Query: 567 acgtgaacacataccgcaggacattcactaccaagaacg 605
| || ||||| |||||||| || ||||||||||||||||
Sbjct: 534 atgtcaacacttaccgcagaaccttcactaccaagaacg 572
>gb|CF277193.1|CF277193 14ETL--02-K06.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-K06, mRNA sequence
Length = 549
Score = 496 bits (250), Expect = e-137
Identities = 452/518 (87%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 32 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 91
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 92 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 151
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 152 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 211
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 212 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 271
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 272 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 331
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 332 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 391
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 392 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 451
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatg-atgatgtacgcaagt 566
|||||| || |||||||| |||||||| |||||| |||||||| ||||||| |||||||
Sbjct: 452 gagggcatctaagatcaggaagctgtttaaccttgccaaggatgnatgatgtccgcaagt 511
Query: 567 acgtgaacacataccgcaggacattcactaccaagaac 604
| || ||||| |||||||| || |||||||||||||||
Sbjct: 512 atgtcaacacttaccgcagaaccttcactaccaagaac 549
>gb|CO435851.1|CO435851 OsMR917 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 891
Score = 482 bits (243), Expect = e-133
Identities = 433/497 (87%), Gaps = 1/497 (0%)
Strand = Plus / Plus
Query: 93 ccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatg 152
||||||||||||||||||||||||| ||||||||||||| || ||||| || |||||||
Sbjct: 124 ccatgaagttcaacatcgcgaacccgaccaccgggtgccagaanaagctcgagatcgatg 183
Query: 153 acgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatg 212
||||||||||||||||||| |||| |||| ||||| || |||||||||||||| ||||
Sbjct: 184 acgaccagaagctgcgtgcattttttgacaagaggatctctcaggaggtcagtggcgatg 243
Query: 213 ctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaag 272
||||||| ||||| |||||||| |||||||||||||||||||| || ||||||||||| |
Sbjct: 244 ctctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagg 303
Query: 273 gcttcccaatgaagcaagg-agttttgacttctggtcgtgttcgtcttctgctccatagg 331
| ||||| |||||||| | | | | ||| |||| ||||| || ||||| || || |||
Sbjct: 304 gtttccctatgaagcaggntantgctcactgctggacgtgtccgccttcttcttcacagg 363
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 364 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaantctgtc 423
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 424 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaaaaagggt 483
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||| ||||| || |||||||| |||||||||
Sbjct: 484 gagaatgacctgcctggccttactgacactganaagcccagnatgaggggacccaagagg 543
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| || ||||| ||||||||||||||| ||||| || ||
Sbjct: 544 gcctccaagatcaggaagctctttcacctttccaaggatgatgatgtccgcaaatatgtc 603
Query: 572 aacacataccgcaggac 588
||||| |||||||||||
Sbjct: 604 aacacctaccgcaggac 620
>gb|CF280065.1|CF280065 14ETL--06-J14.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-J14, mRNA sequence
Length = 557
Score = 480 bits (242), Expect = e-133
Identities = 451/518 (87%), Gaps = 2/518 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 41 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 100
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 101 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 160
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 161 tgatgctcttggcgatgaattcaagggctatgtattcaagatcatgggaggctgtgacaa 220
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 221 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 280
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 281 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 340
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 341 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 400
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 401 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 460
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatg-atgatgtacgcaagt 566
|||||| || |||||||| |||||||| |||||| | |||||| ||||||| |||||||
Sbjct: 461 gagggcatctaagatcaggaagctgtttaacctt-gccaggatgnatgatgtccgcaagt 519
Query: 567 acgtgaacacataccgcaggacattcactaccaagaac 604
| || ||||| |||||||| || |||||||||||||||
Sbjct: 520 atgtcaacacttaccgcagaaccttcactaccaagaac 557
>gb|AU065256.1|AU065256 AU065256 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60911_1A, mRNA sequence
Length = 586
Score = 476 bits (240), Expect = e-131
Identities = 478/553 (86%), Gaps = 4/553 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 24 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 83
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 84 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 143
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 144 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 203
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 204 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 263
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 264 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 323
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 324 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 383
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| | ||||||||| |||||
Sbjct: 384 gggtgataatgaccttcctggcttgactgacactgagaagcccaagatgaggggacccaa 443
Query: 508 gagggcctc-caaga-tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaag 565
|||||| || |||| |||| || ||||| |||||| ||||||||||||||| ||||||
Sbjct: 444 gagggcatcttaagattcaggaanctgtttaaccttgccaaggatgatgatgtccgcaag 503
Query: 566 tacg-tgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaa-gg 623
|| | | ||||| |||||||| || ||||||| ||||||||||||||| || ||||| ||
Sbjct: 504 tatgttcaacacttaccgcagaaccttcactancaagaacggcaagaangttagcaaggg 563
Query: 624 cacctaagatcca 636
| |||||||||||
Sbjct: 564 ctcctaagatcca 576
>gb|CF339211.1|CF339211 RCL1--04-C09.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--04-C09, mRNA sequence
Length = 506
Score = 474 bits (239), Expect = e-131
Identities = 435/499 (87%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 9 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 68
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 69 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 128
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 129 gccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagagga 188
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 189 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 248
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
| ||||| || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |
Sbjct: 249 t-atggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggac 307
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatg 368
|||| || ||||| || || |||||||| || ||||||||||| |||||||||||| |||
Sbjct: 308 gtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatg 367
Query: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatca 428
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 368 gtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttatta 427
Query: 429 acttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagc 488
||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 428 acttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaagc 487
Query: 489 caaggatgaggggtcccaa 507
| ||||||||||| |||||
Sbjct: 488 ccaggatgaggggacccaa 506
>gb|D15194.1|D15194 RICC0241A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0241A, mRNA sequence
Length = 383
Score = 464 bits (234), Expect = e-128
Identities = 343/378 (90%), Gaps = 1/378 (0%)
Strand = Plus / Plus
Query: 371 gagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaac 430
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 1 gagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttattaac 60
Query: 431 ttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagcca 490
||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 61 ttggtgattgtcaagaagggtgagaatgacctgcctggccttactgacactgagaagccc 120
Query: 491 aggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggat 550
||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 121 aggatgaggggacccaagagggcctccaagatcaggaagctcttcaacctttccaaggat 180
Query: 551 gatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggcaag 610
|||||||| ||||| || || ||||| |||||||| |||||||||||||||| ||||||
Sbjct: 181 gatgatgtccgcaaatatgtcaacacctaccgcagaccattcactaccaagaatggcaag 240
Query: 611 aaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagaggaag 670
||||| |||||||| ||||||||||| || |||||||| || | |||||||||||||||
Sbjct: 241 aaggtgagcaaggctcctaagatccagcgtcttgtgacttccctcaccctccagaggaag 300
Query: 671 cgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctgctgag 730
||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||||
Sbjct: 301 cgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggctgctgag 360
Query: 731 taccagaagcttcttgcc 748
||||||||| ||||||||
Sbjct: 361 taccagaag-ttcttgcc 377
>gb|CF280071.1|CF280071 14ETL--06-J17.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-J17, mRNA sequence
Length = 569
Score = 464 bits (234), Expect = e-128
Identities = 441/510 (86%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 60 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 119
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 120 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 179
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 180 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 239
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 240 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 299
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 300 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 359
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 360 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 419
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 420 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 479
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagta 567
|||||| || |||||||| |||||||| |||||| ||| ||||||||||| | ||||
Sbjct: 480 gagggcatctaagatcaggaagctgtttaaccttgccaaagatgatgatgtcccgcagta 539
Query: 568 cgtgaacacataccgcaggacattcactac 597
|| ||||| |||||||| || ||||||||
Sbjct: 540 tgtcaacacttaccgcagaaccttcactac 569
>gb|CF304541.1|CF304541 ABF1--05-E08.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--05-E08, mRNA sequence
Length = 495
Score = 464 bits (234), Expect = e-128
Identities = 411/470 (87%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 26 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 85
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 86 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 145
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 146 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 205
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 206 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 265
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 266 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 325
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 326 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 385
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 386 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 445
Query: 508 gagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatg 557
|||||| || |||||||| |||||||| |||||| ||||||||||||||
Sbjct: 446 gagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatg 495
>gb|CV732114.1|CV732114 FLO--06-H04.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-H04,
mRNA sequence
Length = 529
Score = 444 bits (224), Expect = e-122
Identities = 395/452 (87%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 78 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 137
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 138 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 197
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 198 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 257
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 258 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 317
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 318 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 377
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaa 447
|||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||
Sbjct: 378 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaa 437
Query: 448 gggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaa 507
|||||| ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 438 gggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaa 497
Query: 508 gagggcctccaagatcagaaagctgttcaacc 539
|||||| || |||||||| |||||||| ||||
Sbjct: 498 gagggcatctaagatcaggaagctgtttaacc 529
>gb|D22814.1|D22814 RICC1417A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1417_1A, mRNA sequence
Length = 380
Score = 404 bits (204), Expect = e-110
Identities = 328/368 (89%), Gaps = 1/368 (0%)
Strand = Plus / Plus
Query: 281 atgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccc 340
|||||||| ||||| | ||| |||| ||||| || ||||| || || |||||||| ||
Sbjct: 3 atgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacaggggcacacct 62
Query: 341 tgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgc 400
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 63 tgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtccgtggttgc 122
Query: 401 atcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgat 460
||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 123 atcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggtgagaatgac 182
Query: 461 ctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaag 520
|||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 183 ctgcctggccttactgacactgagaagcccaggatgaggggacccaagagggcctccaag 242
Query: 521 atcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatac 580
||||| ||||| ||||||||| ||||||||||||||| ||||| || || ||||| |||
Sbjct: 243 atcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtcaacacctac 302
Query: 581 cgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacgg 640
|||| |||||||||||||||||| ||||||| ||| |||||||| ||||||||||| ||
Sbjct: 303 cgca-gacattcactaccaagaatggcaagagggtgagcaaggctcctaagatccagcgt 361
Query: 641 cttgtgac 648
||||||||
Sbjct: 362 cttgtgac 369
>gb|C29131.1|C29131 C29131 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C63665_1A, mRNA sequence
Length = 465
Score = 398 bits (201), Expect = e-108
Identities = 343/391 (87%)
Strand = Plus / Plus
Query: 78 cgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaaga 137
|||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 39 cgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggtgccagaaga 98
Query: 138 agctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccagg 197
|||| || |||||||||||||||||||||||||| |||| | || ||||| || ||||
Sbjct: 99 agctcgagatcgatgacgaccagaagctgcgtgcattttttnacaagaggatctctcagg 158
Query: 198 aggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtg 257
|||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct: 159 aggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaagatcatggggg 218
Query: 258 gatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtc 317
| ||| ||||||| || ||||| |||||||| ||||| | ||| |||| ||||| || |
Sbjct: 219 gttgtnacaagcagggtttccctatgaagcagggagtgctcactgctggacgtgtccgcc 278
Query: 318 ttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgca 377
|||| || || |||||||| || ||||||||||| |||||||||||| ||||||||||||
Sbjct: 279 ttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgca 338
Query: 378 ggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtga 437
|||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 339 ggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttattaacttggtga 398
Query: 438 ttgtgaagaagggtgagaatgatctgcctgg 468
|| | ||||||||||||||| | ||||||||
Sbjct: 399 ttttcaagaagggtgagaataacctgcctgg 429
>gb|CB000484.1|CB000484 S345Z_F07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 504
Score = 396 bits (200), Expect = e-107
Identities = 377/436 (86%)
Strand = Plus / Plus
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
||||||| || |||||||||||||| ||||| ||||| | || || | |||||||| |
Sbjct: 5 tcatgggaggctgtgacaagcaaggtttccccatgaaccttggtgtgcttacttctggac 64
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatg 368
|||| || ||||| ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 65 gtgtccgccttctcctccacaggggtaccccctgcttccgtggatatggcaggcgtgatg 124
Query: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatca 428
|||||||||| |||||||| |||||||||||||| || |||||||| || ||||||||||
Sbjct: 125 gtgagcgcagaaggaagtcagtccgtggttgcattgtcagccaagatctctctgttatca 184
Query: 429 acttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagc 488
||||||||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||
Sbjct: 185 acttggtgattgtaaagaagggtgataatgaccttcctggcttgactgacactgagaagc 244
Query: 489 caaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaagg 548
| ||||||||||| ||||||||||| || |||||||| |||||||| |||||| |||||
Sbjct: 245 ccaggatgaggggacccaagagggcatctaagatcaggaagctgtttaaccttgccaagg 304
Query: 549 atgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggca 608
|||||||||| |||||||| || ||||| |||||| | || |||||||||||||||||||
Sbjct: 305 atgatgatgtccgcaagtatgtcaacacttaccgctgaaccttcactaccaagaacggca 364
Query: 609 agaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagagga 668
||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||||||
Sbjct: 365 agaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcagagga 424
Query: 669 agcgtgctagaatcgc 684
|| | || ||||||||
Sbjct: 425 agagggcgagaatcgc 440
>gb|CF339319.1|CF339319 RCL1--04-H24.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--04-H24, mRNA sequence
Length = 478
Score = 394 bits (199), Expect = e-107
Identities = 402/470 (85%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 9 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 68
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 69 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 128
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||| |||||||| |||| |||| ||||
Sbjct: 129 gccagaagaagctcgagatcgatgacgaccattttctgcgtgcattttttgacaagagga 188
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 189 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 248
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
|| || || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |
Sbjct: 249 tctgggngggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggac 308
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatg 368
|||| || ||||| || || |||||||| || ||||||||||| |||||||||||| |||
Sbjct: 309 gtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgatg 368
Query: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatca 428
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 369 gtgagcgcaggaggaagtctgtccgtggttgcatcgtcagccaggacctatctgttatta 428
Query: 429 acttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgac 478
||||||||||||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 429 acttggtgattgtcaagaagggtgagaatgacctgcctggccttactgac 478
>gb|D46458.1|D46458 RICS11150A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 379
Score = 379 bits (191), Expect = e-102
Identities = 305/344 (88%)
Strand = Plus / Plus
Query: 209 gatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaag 268
||||||||||| ||||| |||||||| |||||||||||||||||||| || |||||||||
Sbjct: 4 gatgctctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaag 63
Query: 269 caaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccat 328
|| || ||||| |||||||| ||||| | ||| |||| ||||| || ||||| || ||
Sbjct: 64 cagggtttccctatgaagcagggagtgctcactgctggacgtgtccgccttcttcttcac 123
Query: 329 aggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtct 388
|||||||| || ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 124 aggggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtct 183
Query: 389 gtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaag 448
||||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 184 gtccgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaag 243
Query: 449 ggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaag 508
||||||||||| |||||||| || ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 244 ggtgagaatgacctgcctggccttactgacactgagaagcccaggatnaggggacccaag 303
Query: 509 agggcctccaagatcagaaagctgttcaaccttaacaaggatga 552
|||||||||||| |||| ||| | ||||||||| |||||||||
Sbjct: 304 agggcctccaaggtcaggaagntcttcaacctttncaaggatga 347
>gb|AU032241.1|AU032241 AU032241 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3792_1A, mRNA sequence
Length = 432
Score = 375 bits (189), Expect = e-101
Identities = 320/364 (87%)
Strand = Plus / Plus
Query: 71 gcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgc 130
|||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 26 gcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggtgc 85
Query: 131 caaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggata 190
|| |||||||| || |||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 86 cagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagaggatc 145
Query: 191 tcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatc 250
|| |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 146 tctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaagatc 205
Query: 251 atgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgt 310
||||| || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |||
Sbjct: 206 atggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggacgt 265
Query: 311 gttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggt 370
|| || ||||| || || |||||||| | ||||||||||| |||||||||||| |||||
Sbjct: 266 gtccgccttcttcttcacaggggcacaacttgcttccgtgggtatggcaggcgtgatggt 325
Query: 371 gagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaac 430
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 326 gagcgcaggaggaagtctgtccgtggttgcatcgtnagccaggacctatctgttattaac 385
Query: 431 ttgg 434
||||
Sbjct: 386 ttgg 389
>gb|CV722542.1|CV722542 YTPSP--01-L20.b1 TPSP-overexpression transgenic rice yeast two
hybrid lambda phage cDNA library (YTPSP) Oryza sativa
(japonica cultivar-group) cDNA clone YTPSP--01-L20, mRNA
sequence
Length = 496
Score = 365 bits (184), Expect = 3e-098
Identities = 265/292 (90%)
Strand = Plus / Minus
Query: 550 tgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggcaa 609
||||||||| ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 496 tgatgatgtccgcaaatatgtcaacacctaccgcaggacattcactaccaagaatggcaa 437
Query: 610 gaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagaggaa 669
|||||| |||||||| ||||||||||| || |||||||| ||| | ||||||||||||||
Sbjct: 436 gaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccagaggaa 377
Query: 670 gcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctgctga 729
|||||| |||||||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 376 gcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggctgctga 317
Query: 730 gtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgagagctt 789
||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 316 gtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgagagctt 257
Query: 790 ggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 256 ggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 205
>dbj|AP003744.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1119_F04,
*** SEQUENCING IN PROGRESS ***
Length = 112512
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Minus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 37969 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 37910
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 37909 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 37850
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 37849 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 37790
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 37789 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 37730
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 37729 aacacctaccgcaggacattcactaccaagaa 37698
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Minus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 37493 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 37434
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 37433 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 37374
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 37373 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 37314
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 37313 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 37257
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 39322 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39263
Query: 159 agaagctg 166
||||||||
Sbjct: 39262 agaagctg 39255
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 38159 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 38100
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 38099 tgaagcagggagt 38087
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 39532 aaaaccctagccctcgcgccgccgcc 39507
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 38278 aggatctctcaggaggtcagtggcgatgctctgggcgagg 38239
>gb|AACV01016813.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016813, whole
genome shotgun sequence
Length = 20178
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 13612 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 13671
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 13672 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 13731
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 13732 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 13791
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 13792 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 13851
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 13852 aacacctaccgcaggacattcactaccaagaa 13883
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 14088 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 14147
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 14148 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 14207
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 14208 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 14267
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 14268 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 14324
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 12259 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 12318
Query: 159 agaagctg 166
||||||||
Sbjct: 12319 agaagctg 12326
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 13422 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 13481
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 13482 tgaagcagggagt 13494
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 12049 aaaaccctagccctcgcgccgccgcc 12074
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 13303 aggatctctcaggaggtcagtggcgatgctctgggcgagg 13342
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0594D10
Length = 143200
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 124844 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 124903
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 124904 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 124963
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 124964 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 125023
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 125024 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 125083
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 125084 aacacctaccgcaggacattcactaccaagaa 125115
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 125320 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 125379
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 125380 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 125439
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 125440 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 125499
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 125500 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 125556
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 123491 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 123550
Query: 159 agaagctg 166
||||||||
Sbjct: 123551 agaagctg 123558
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 124654 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 124713
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 124714 tgaagcagggagt 124726
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 123281 aaaaccctagccctcgcgccgccgcc 123306
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 124535 aggatctctcaggaggtcagtggcgatgctctgggcgagg 124574
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 13283876 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 13283935
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 13283936 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 13283995
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 13283996 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 13284055
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 13284056 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 13284115
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 13284116 aacacctaccgcaggacattcactaccaagaa 13284147
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 13284352 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 13284411
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 13284412 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 13284471
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 13284472 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 13284531
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 13284532 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 13284588
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 13282523 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 13282582
Query: 159 agaagctg 166
||||||||
Sbjct: 13282583 agaagctg 13282590
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 13283686 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 13283745
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 13283746 tgaagcagggagt 13283758
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 13282313 aaaaccctagccctcgcgccgccgcc 13282338
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 13283567 aggatctctcaggaggtcagtggcgatgctctgggcgagg 13283606
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 11127753 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 11127812
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 11127813 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 11127872
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 11127873 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 11127932
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 11127933 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 11127992
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 11127993 aacacctaccgcaggacattcactaccaagaa 11128024
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 11128229 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 11128288
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 11128289 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 11128348
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 11128349 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 11128408
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 11128409 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 11128465
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 11126400 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 11126459
Query: 159 agaagctg 166
||||||||
Sbjct: 11126460 agaagctg 11126467
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 11127563 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 11127622
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 11127623 tgaagcagggagt 11127635
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 11126190 aaaaccctagccctcgcgccgccgcc 11126215
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 11127444 aggatctctcaggaggtcagtggcgatgctctgggcgagg 11127483
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 24527192 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 24527251
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 24527252 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 24527311
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 24527312 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 24527371
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 24527372 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 24527431
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 24527432 aacacctaccgcaggacattcactaccaagaa 24527463
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 24527668 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 24527727
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 24527728 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 24527787
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 24527788 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 24527847
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 24527848 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 24527904
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 24525839 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 24525898
Query: 159 agaagctg 166
||||||||
Sbjct: 24525899 agaagctg 24525906
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 24527002 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 24527061
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 24527062 tgaagcagggagt 24527074
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 24525629 aaaaccctagccctcgcgccgccgcc 24525654
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 24526883 aggatctctcaggaggtcagtggcgatgctctgggcgagg 24526922
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 365 bits (184), Expect = 3e-098
Identities = 250/272 (91%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 25670871 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 25670930
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 25670931 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 25670990
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 25670991 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 25671050
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| || ||
Sbjct: 25671051 gcctccaagatcaggaagctcttcaacctttccaaggatgatgatgtccgcaaatatgtc 25671110
Query: 572 aacacataccgcaggacattcactaccaagaa 603
||||| ||||||||||||||||||||||||||
Sbjct: 25671111 aacacctaccgcaggacattcactaccaagaa 25671142
Score = 303 bits (153), Expect = 1e-079
Identities = 216/237 (91%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| || |||||||| ||| | |||||||||
Sbjct: 25671347 ggcaagaaggtgagcaaggctcctaagatccagcgtcttgtgactcccctcaccctccag 25671406
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 25671407 aggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcggaggct 25671466
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 25671467 gctgagtaccagaagcttcttgcccagaggctcaaggagcagagggaacgccggagcgag 25671526
Query: 785 agcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgctgccacc 841
|||||||| ||||||||||||||||||||| | || ||||||||| ||||| |||||
Sbjct: 25671527 agcttggcaaagaggaggtccaagctttcttctgctgccaaggctgctgctaccacc 25671583
Score = 95.6 bits (48), Expect = 5e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 25669518 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 25669577
Query: 159 agaagctg 166
||||||||
Sbjct: 25669578 agaagctg 25669585
Score = 81.8 bits (41), Expect = 7e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| |||||||||||||||||||| || ||||||||||| || ||||| |
Sbjct: 25670681 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 25670740
Query: 282 tgaagcaaggagt 294
||||||| |||||
Sbjct: 25670741 tgaagcagggagt 25670753
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcc 34
||||||||||||||||||||||||||
Sbjct: 25669308 aaaaccctagccctcgcgccgccgcc 25669333
Score = 48.1 bits (24), Expect = 0.010
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctctgggtgagg 224
||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 25670562 aggatctctcaggaggtcagtggcgatgctctgggcgagg 25670601
>gb|AU065198.1|AU065198 AU065198 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60563_1A, mRNA sequence
Length = 441
Score = 347 bits (175), Expect = 8e-093
Identities = 353/410 (86%), Gaps = 2/410 (0%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 24 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 83
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 84 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 143
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 144 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 203
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 204 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 263
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| ||| |||||||| ||||||||||||| ||||||||
Sbjct: 264 caggggtaccccctgcttccgtggatatngcaggcgtgatggtgagcgcagaaggaagtc 323
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggt-gattgt-gaag 445
|||||||||||||| || |||||| | || ||||||||||||||||| |||||| |||
Sbjct: 324 agtccgtggttgcattgtcagccaaaatctctctgttatcaacttggtggattgtaaaag 383
Query: 446 aagggtgagaatgatctgcctggtctgactgacactgagaagccaaggat 495
|||||||| ||||| || ||||| ||||||||||||| ||||| |||||
Sbjct: 384 aagggtgataatgaccttcctggcttgactgacactgaaaagcccaggat 433
>gb|AU172401.1|AU172401 AU172401 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C63665, mRNA sequence
Length = 449
Score = 345 bits (174), Expect = 3e-092
Identities = 240/262 (91%)
Strand = Plus / Plus
Query: 580 ccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacg 639
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 1 ccgcaggacattcactaccaagaatggcaagaaggtgagcaaggctcctaagatccagcg 60
Query: 640 gcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagag 699
|||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tcttgtgactcccctcaccctccagaggaagcgtgccagaatcgctgacaagaagaagag 120
Query: 700 gataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaa 759
||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 gatcgccaagaagaagtcggaggctgctgagtaccagaagcttcttgcccagaggctcaa 180
Query: 760 ggaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctttctgccgc 819
||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||
Sbjct: 181 ggagcagagggaacgccggagcgagagcttggcaaagaggaggtccaagctttcttctgc 240
Query: 820 cgccaaggcttctgctgccacc 841
||||||||| ||||| |||||
Sbjct: 241 tgccaaggctgctgctaccacc 262
>gb|CF294263.1|CF294263 30DGS--03-L17.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-L17, mRNA sequence
Length = 380
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 88 cgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaat 147
|||| ||||||||||||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 30 cgccgccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagat 89
Query: 148 cgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtgg 207
|||||||||||||||||| || || ||||||||| ||||| |||||||| ||||||||
Sbjct: 90 cgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtgg 149
Query: 208 tgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaa 267
||||||||| || || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 150 tgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaa 209
Query: 268 gcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctcca 327
|||||| ||||| |||||||| || || | |||||||| ||||| || ||||| |||||
Sbjct: 210 gcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctcca 269
Query: 328 taggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtc 387
||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 270 caggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtc 329
Query: 388 tgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgat 438
|||||||||||||| || |||||||| || ||||||||||||||||||||
Sbjct: 330 agtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgat 380
>gb|AU225827.1|AU225827 AU225827 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0850, mRNA sequence
Length = 589
Score = 337 bits (170), Expect = 8e-090
Identities = 302/346 (87%)
Strand = Plus / Minus
Query: 471 tgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagc 530
||||||||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||
Sbjct: 583 tgactgacactgagaagcccaggatgaggggacccaagagggcatctaagatcaggaagc 524
Query: 531 tgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacat 590
|||| |||||| ||||||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 523 tgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacacttaccgcagaacct 464
Query: 591 tcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacac 650
||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| || |
Sbjct: 463 tcactaccaagaacggcaagaaggttagcaaggctcctaagatccagaggcttgtcactc 404
Query: 651 ccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaaga 710
|| |||| || ||||||||| | || |||||||| | |||||| | || || | ||||
Sbjct: 403 ccctgactcttcagaggaagagggcgagaatcgcccagaagaagcaaagaattgccaaga 344
Query: 711 agaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagaggg 770
||||||| |||||||| |||||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 343 agaagtccgaggctgccgagtaccagaagctgcttgcccagaggctcaaggagcagaggg 284
Query: 771 accgccggagcgagagcttggccaagaggaggtccaagctttctgc 816
| ||| |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 283 aacgcaggagtgagagcttggcaaagaggaggtccaagctttctgc 238
>gb|CF338931.1|CF338931 RCL1--03-E04.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--03-E04, mRNA sequence
Length = 403
Score = 331 bits (167), Expect = 5e-088
Identities = 339/395 (85%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 9 aaaaccctagccctcgcgccgccgcctccttcgccacccagcgctcgagctcctcgctcc 68
|||||||||||||||||||||||||| || ||| ||| |||| | || ||||| |
Sbjct: 9 aaaaccctagccctcgcgccgccgccgccgccgctcccccgcgcactcgccgctcgccgc 68
Query: 69 ctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggt 128
| |||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 69 ccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccgaccaccgggt 128
Query: 129 gccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagga 188
|||| |||||||| || |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 129 gccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttgacaagagga 188
Query: 189 tatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaaga 248
| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 189 tctctcaggaggtcagtggcgatgctctgggcgaggaattcaagggctatgtcttcaaga 248
Query: 249 tcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtc 308
||||||| || ||||||||||| || ||||| |||||||| ||||| | ||| |||| |
Sbjct: 249 tcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctcactgctggac 308
Query: 309 gtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgt-aat 367
|||| || ||||| || || |||||||| || ||||||||||| |||||||||||| ||
Sbjct: 309 gtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggcaggcgtgaac 368
Query: 368 ggtgagcgcaggaggaagtctgtccgtggttgcat 402
||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtgagcgcaggaggaagtctgtccgtggttgcat 403
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
sequence
Length = 164705
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Plus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 40170 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 40229
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 40230 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 40289
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 40290 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 40349
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 40350 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 40409
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 40410 taccgcagaaccttcactaccaagaacgg 40438
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 40670 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 40729
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 40730 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 40789
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 40790 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 40849
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 40850 agcttggcaaagaggaggtccaagctttctgc 40881
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 39959 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 40018
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 40019 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 40070
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 38992 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39051
Query: 159 agaagctg 166
||||||||
Sbjct: 39052 agaagctg 39059
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 39836 aggatctcccaggaagtcagtggtgatgctct 39867
>gb|AACV01006785.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006785, whole
genome shotgun sequence
Length = 28468
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Plus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 3458 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 3517
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 3518 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 3577
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 3578 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 3637
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 3638 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 3697
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 3698 taccgcagaaccttcactaccaagaacgg 3726
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 3958 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 4017
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 4018 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 4077
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 4078 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 4137
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 4138 agcttggcaaagaggaggtccaagctttctgc 4169
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 3247 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 3306
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 3307 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 3358
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 2280 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 2339
Query: 159 agaagctg 166
||||||||
Sbjct: 2340 agaagctg 2347
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 3124 aggatctcccaggaagtcagtggtgatgctct 3155
>ref|NT_079854.2| Oryza sativa (japonica cultivar-group)
Length = 2592259
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Minus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 1852632 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 1852573
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1852572 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 1852513
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 1852512 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 1852453
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 1852452 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 1852393
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 1852392 taccgcagaaccttcactaccaagaacgg 1852364
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Minus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 1852132 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 1852073
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 1852072 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 1852013
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 1852012 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 1851953
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 1851952 agcttggcaaagaggaggtccaagctttctgc 1851921
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 1853810 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 1853751
Query: 159 agaagctg 166
||||||||
Sbjct: 1853750 agaagctg 1853743
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 1852843 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 1852784
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 1852783 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 1852732
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 1852966 aggatctcccaggaagtcagtggtgatgctct 1852935
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Minus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 2056099 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 2056040
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 2056039 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 2055980
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 2055979 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 2055920
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 2055919 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 2055860
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 2055859 taccgcagaaccttcactaccaagaacgg 2055831
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Minus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 2055599 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 2055540
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 2055539 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 2055480
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 2055479 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 2055420
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 2055419 agcttggcaaagaggaggtccaagctttctgc 2055388
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 2057277 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 2057218
Query: 159 agaagctg 166
||||||||
Sbjct: 2057217 agaagctg 2057210
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 2056310 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 2056251
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 2056250 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 2056199
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 2056433 aggatctcccaggaagtcagtggtgatgctct 2056402
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Minus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 16106806 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 16106747
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 16106746 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 16106687
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 16106686 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 16106627
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 16106626 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 16106567
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 16106566 taccgcagaaccttcactaccaagaacgg 16106538
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Minus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 16106306 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 16106247
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 16106246 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 16106187
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 16106186 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 16106127
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 16106126 agcttggcaaagaggaggtccaagctttctgc 16106095
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 16107984 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 16107925
Query: 159 agaagctg 166
||||||||
Sbjct: 16107924 agaagctg 16107917
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 16107017 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 16106958
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 16106957 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 16106906
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 16107140 aggatctcccaggaagtcagtggtgatgctct 16107109
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Minus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 15455890 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 15455831
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 15455830 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 15455771
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 15455770 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 15455711
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 15455710 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 15455651
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 15455650 taccgcagaaccttcactaccaagaacgg 15455622
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Minus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 15455390 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 15455331
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 15455330 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 15455271
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 15455270 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 15455211
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 15455210 agcttggcaaagaggaggtccaagctttctgc 15455179
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 15457068 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15457009
Query: 159 agaagctg 166
||||||||
Sbjct: 15457008 agaagctg 15457001
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 15456101 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15456042
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 15456041 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15455990
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 15456224 aggatctcccaggaagtcagtggtgatgctct 15456193
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 311 bits (157), Expect = 4e-082
Identities = 241/269 (89%)
Strand = Plus / Minus
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 15461356 ccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggt 15461297
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || |||||||| || ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 15461296 tgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataat 15461237
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || ||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 15461236 gaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatct 15461177
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| |||||||| |||||| ||||||||||||||| |||||||| || |||||
Sbjct: 15461176 aagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacact 15461117
Query: 578 taccgcaggacattcactaccaagaacgg 606
|||||||| || |||||||||||||||||
Sbjct: 15461116 taccgcagaaccttcactaccaagaacgg 15461088
Score = 182 bits (92), Expect = 3e-043
Identities = 182/212 (85%)
Strand = Plus / Minus
Query: 605 ggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccag 664
||||||||||| |||||||| ||||||||||| ||||||| || ||| |||| || |||
Sbjct: 15460856 ggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcag 15460797
Query: 665 aggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggct 724
|||||| | || |||||||| | |||||| | || || | ||||||||||| ||||||
Sbjct: 15460796 aggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggct 15460737
Query: 725 gctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcgag 784
|| |||||||||||||| |||||||||||||| ||||| |||||||| ||| |||| |||
Sbjct: 15460736 gccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgag 15460677
Query: 785 agcttggccaagaggaggtccaagctttctgc 816
|||||||| |||||||||||||||||||||||
Sbjct: 15460676 agcttggcaaagaggaggtccaagctttctgc 15460645
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||| ||||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 15462534 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15462475
Query: 159 agaagctg 166
||||||||
Sbjct: 15462474 agaagctg 15462467
Score = 87.7 bits (44), Expect = 1e-014
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||||| |
Sbjct: 15461567 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15461508
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagggg 333
||||||| || || | |||||||| ||||| || ||||| ||||| |||||
Sbjct: 15461507 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15461456
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 185 aggatatcccaggaggtcagtggtgatgctct 216
||||| |||||||| |||||||||||||||||
Sbjct: 15461690 aggatctcccaggaagtcagtggtgatgctct 15461659
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,751,266
Number of Sequences: 438736
Number of extensions: 1751266
Number of successful extensions: 17297
Number of sequences better than 0.5: 89
Number of HSP's better than 0.5 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16804
Number of HSP's gapped (non-prelim): 444
length of query: 1101
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1080
effective length of database: 2,791,206,460
effective search space: 3014502976800
effective search space used: 3014502976800
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)