BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.405
(1589 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK061642.1| Oryza sativa (japonica cultivar-group) cDNA... 759 0.0
dbj|AK103134.1| Oryza sativa (japonica cultivar-group) cDNA... 751 0.0
dbj|AK103615.1| Oryza sativa (japonica cultivar-group) cDNA... 751 0.0
gb|CB674992.1|CB674992 OSJNEe10G10.r OSJNEe Oryza sativa (j... 571 e-160
gb|CB662208.1|CB662208 OSJNEd06A07.r OSJNEd Oryza sativa (j... 486 e-134
gb|CB643997.1|CB643997 OSJNEb05A03.r OSJNEb Oryza sativa (j... 480 e-132
gb|AU065707.1|AU065707 AU065707 Rice cDNA from immature lea... 416 e-113
gb|CB643996.1|CB643996 OSJNEb05A03.f OSJNEb Oryza sativa (j... 410 e-112
gb|AC098572.2| Oryza sativa (japonica cultivar-group) chrom... 389 e-105
gb|AACV01011667.1| Oryza sativa (japonica cultivar-group) c... 389 e-105
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 389 e-105
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 389 e-105
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 389 e-105
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 389 e-105
gb|AU063863.1|AU063863 AU063863 Rice panicle at flowering s... 387 e-104
gb|CB674991.1|CB674991 OSJNEe10G10.f OSJNEe Oryza sativa (j... 379 e-102
gb|CB662207.1|CB662207 OSJNEd06A07.f OSJNEd Oryza sativa (j... 369 3e-099
gb|AU063905.1|AU063905 AU063905 Rice panicle at flowering s... 363 2e-097
gb|AU055896.1|AU055896 AU055896 Oryza sativa mature leaf Ni... 357 1e-095
gb|AU030256.1|AU030256 AU030256 Rice cDNA from immature lea... 341 7e-091
gb|AU094027.1|AU094027 AU094027 Rice panicle at flowering s... 339 3e-090
gb|AU165461.1|AU165461 AU165461 Rice panicle at flowering s... 337 1e-089
gb|AU030462.1|AU030462 AU030462 Rice cDNA from immature lea... 331 7e-088
gb|AU032164.1|AU032164 AU032164 Rice root Oryza sativa (jap... 307 1e-080
gb|CA997872.1|CA997872 S234B1_F03 Rice cold stress germinat... 283 1e-073
dbj|D12637.1|RICATADPT Oryza sativa (japonica cultivar-grou... 283 1e-073
dbj|AK073448.1| Oryza sativa (japonica cultivar-group) cDNA... 283 1e-073
dbj|AK119207.1| Oryza sativa (japonica cultivar-group) cDNA... 283 1e-073
ref|XM_467495.1| Oryza sativa (japonica cultivar-group), mRNA 283 1e-073
ref|XM_506941.2| PREDICTED Oryza sativa (japonica cultivar-... 283 1e-073
ref|XM_507526.1| PREDICTED Oryza sativa (japonica cultivar-... 283 1e-073
dbj|AK100143.1| Oryza sativa (japonica cultivar-group) cDNA... 276 4e-071
gb|CB643568.1|CB643568 OSJNEb04F08.f OSJNEb Oryza sativa (j... 272 5e-070
gb|CB650964.1|CB650964 OSJNEb15L12.f OSJNEb Oryza sativa (j... 272 5e-070
gb|C28991.1|C28991 C28991 Rice callus cDNA Oryza sativa (ja... 270 2e-069
gb|CB643532.1|CB643532 OSJNEb04E07.f OSJNEb Oryza sativa (j... 262 5e-067
gb|CB646017.1|CB646017 OSJNEb08C13.f OSJNEb Oryza sativa (j... 262 5e-067
gb|CF323606.1|CF323606 HDN--04-E18.g1 OsHDAC1-overexpressin... 254 1e-064
gb|D47395.1|D47395 RICS12780A Rice green shoot Oryza sativa... 246 3e-062
gb|CB675587.1|CB675587 OSJNEe11G19.f OSJNEe Oryza sativa (j... 240 2e-060
gb|AU181974.1|AU181974 AU181974 Rice callus (2001) Oryza sa... 234 1e-058
gb|CB682360.1|CB682360 OSJNEf09J13.f OSJNEf Oryza sativa (j... 220 2e-054
gb|CB683212.1|CB683212 OSJNEf11E21.f OSJNEf Oryza sativa (j... 220 2e-054
gb|CB685073.1|CB685073 OSJNEf15D07.f OSJNEf Oryza sativa (j... 220 2e-054
gb|AU091711.1|AU091711 AU091711 Rice mature leaf Oryza sati... 214 1e-052
gb|AU096230.1|AU096230 AU096230 Rice green shoot Oryza sati... 198 7e-048
gb|D25150.1|D25150 RICR3368A Rice root Oryza sativa (japoni... 194 1e-046
gb|C26502.1|C26502 C26502 Rice callus cDNA Oryza sativa (ja... 184 1e-043
gb|AACV01005297.1| Oryza sativa (japonica cultivar-group) c... 182 4e-043
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 182 4e-043
dbj|AP004098.3| Oryza sativa (japonica cultivar-group) geno... 182 4e-043
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-043
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 182 4e-043
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 182 4e-043
gb|CF323587.1|CF323587 HDN--04-D22.g1 OsHDAC1-overexpressin... 165 9e-038
gb|CF323991.1|CF323991 HDN--05-F05.g1 OsHDAC1-overexpressin... 159 6e-036
gb|C72484.1|C72484 C72484 Rice panicle at flowering stage O... 155 9e-035
gb|CB671317.1|CB671317 OSJNEe04N11.r OSJNEe Oryza sativa (j... 151 1e-033
gb|CB671319.1|CB671319 OSJNEe04N12.r OSJNEe Oryza sativa (j... 151 1e-033
dbj|AK121347.1| Oryza sativa (japonica cultivar-group) cDNA... 151 1e-033
gb|CF195963.1|CF195963 Azbi2.1_H05 AZ-BI Oryza sativa (japo... 143 3e-031
gb|CF305172.1|CF305172 ABF1--06-P17.g1 ABF3-overexpressing ... 143 3e-031
gb|CA997891.1|CA997891 S234B1_G09 Rice cold stress germinat... 141 1e-030
gb|AC134933.2| Oryza sativa (japonica cultivar-group) chrom... 127 2e-026
gb|AC137623.3| Oryza sativa (japonica cultivar-group) chrom... 127 2e-026
gb|AACV01012184.1| Oryza sativa (japonica cultivar-group) c... 127 2e-026
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 127 2e-026
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 127 2e-026
gb|CB642265.1|CB642265 OSJNEb02F21.r OSJNEb Oryza sativa (j... 123 3e-025
gb|AU172374.1|AU172374 AU172374 Rice callus (2001) Oryza sa... 103 3e-019
dbj|AK110815.1| Oryza sativa (japonica cultivar-group) cDNA... 100 5e-018
gb|CB646356.1|CB646356 OSJNEb08M11.r OSJNEb Oryza sativa (j... 96 7e-017
gb|CB675588.1|CB675588 OSJNEe11G19.r OSJNEe Oryza sativa (j... 96 7e-017
gb|AU165513.1|AU165513 AU165513 Rice panicle at flowering s... 88 2e-014
gb|AU093210.1|AU093210 AU093210 Rice callus Oryza sativa (j... 82 1e-012
gb|AU108585.1|AU108585 AU108585 Rice callus Oryza sativa (j... 82 1e-012
gb|AU162396.1|AU162396 AU162396 Rice root Oryza sativa (jap... 82 1e-012
gb|CA998048.1|CA998048 ERDCA_G03 Rice cold stress germinati... 82 1e-012
gb|CA998066.1|CA998066 ERDCA_H02 Rice cold stress germinati... 82 1e-012
gb|CB643533.1|CB643533 OSJNEb04E07.r OSJNEb Oryza sativa (j... 82 1e-012
gb|CB643569.1|CB643569 OSJNEb04F08.r OSJNEb Oryza sativa (j... 82 1e-012
gb|CB650965.1|CB650965 OSJNEb15L12.r OSJNEb Oryza sativa (j... 82 1e-012
gb|CB662831.1|CB662831 OSJNEd07D10.f OSJNEd Oryza sativa (j... 82 1e-012
gb|CF307391.1|CF307391 HDA1--06-J05.g1 OsHDAC1-overexpressi... 82 1e-012
gb|CX728054.1|CX728054 OSJNEd07D10.r OSJNEd Oryza sativa (j... 82 1e-012
dbj|AP004040.3| Oryza sativa (japonica cultivar-group) geno... 82 1e-012
gb|D39095.1|D39095 RICR1934A Rice root Oryza sativa (japoni... 80 4e-012
gb|AU093987.1|AU093987 AU093987 Rice panicle at flowering s... 80 4e-012
gb|CF319758.1|CF319758 HD--10-G04.g1 OsHDAC1-overexpressing... 80 4e-012
gb|CA997871.1|CA997871 S234B1_F02 Rice cold stress germinat... 78 2e-011
dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
ref|NM_190204.1| Oryza sativa (japonica cultivar-group), p... 78 2e-011
gb|C97901.1|C97901 C97901 Rice callus Oryza sativa (japonic... 76 7e-011
gb|AU093933.1|AU093933 AU093933 Rice panicle at flowering s... 76 7e-011
gb|C73690.1|C73690 C73690 Rice panicle (longer than 10cm) O... 74 3e-010
gb|CA998016.1|CA998016 S234X_C09 Rice cold stress germinati... 74 3e-010
gb|D49042.2|D49042 RICS15662A Rice green shoot Oryza sativa... 74 3e-010
gb|AU093981.1|AU093981 AU093981 Rice panicle at flowering s... 72 1e-009
gb|AU197468.1|AU197468 AU197468 Rice green shoot Oryza sati... 72 1e-009
gb|CF280382.1|CF280382 14ETL--07-A14.g1 Rice etiolated leaf... 72 1e-009
gb|D15768.1|D15768 RICC1214A Rice callus Oryza sativa (japo... 70 4e-009
gb|BU099187.1|BU099187 S234-XC9 Rice cold stress germinatio... 70 4e-009
gb|D23045.1|D23045 RICC2089A Rice callus Oryza sativa (japo... 68 2e-008
dbj|AG207389.1| Oryza sativa (japonica cultivar-group) DNA,... 66 6e-008
gb|AACV01002826.1| Oryza sativa (japonica cultivar-group) c... 66 6e-008
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 66 6e-008
dbj|AP003431.2| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
dbj|AP003346.4| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 66 6e-008
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 66 6e-008
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
gb|AU222522.1|AU222522 AU222522 Rice callus (2001) Oryza sa... 64 2e-007
gb|AU056767.1|AU056767 AU056767 Oryza sativa mature leaf Ni... 56 6e-005
gb|AU162526.1|AU162526 AU162526 Rice root Oryza sativa (jap... 56 6e-005
gb|AU172944.1|AU172944 AU172944 Rice immature leaf includin... 56 6e-005
gb|CF320093.1|CF320093 HD--10-N12.b1 OsHDAC1-overexpressing... 56 6e-005
dbj|AK108179.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
gb|AU184146.1|AU184146 AU184146 Rice root Oryza sativa (jap... 52 0.001
gb|AU075415.1|AU075415 AU075415 Rice panicle at flowering s... 50 0.004
gb|AU092221.1|AU092221 AU092221 Rice callus Oryza sativa (j... 50 0.004
gb|AU181327.1|AU181327 AU181327 Rice callus (2001) Oryza sa... 50 0.004
dbj|AK064725.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
gb|CF318884.1|CF318884 HD--09-D01.b1 OsHDAC1-overexpressing... 48 0.015
dbj|AK108903.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.015
gb|D24622.1|D24622 RICR2266A Rice root Oryza sativa (japoni... 46 0.059
gb|AU184320.1|AU184320 AU184320 Rice root Oryza sativa (jap... 46 0.059
gb|CV723180.1|CV723180 root--02-L18.g1 Rice root lambda pha... 46 0.059
>dbj|AK061642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B04, full
insert sequence
Length = 1568
Score = 759 bits (383), Expect = 0.0
Identities = 677/775 (87%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 1275 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 1216
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 1215 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 1156
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 1155 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 1096
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 1095 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 1036
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 1035 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 976
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 975 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 916
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 915 gatagacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 856
Query: 810 cactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccaccct 869
|| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 855 cagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccaccct 796
Query: 870 tctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaa 929
|||||||||||||||||||||| |||| ||| ||||| || || ||||||||||| ||||
Sbjct: 795 tctttgcagccttggcatcattagccagacgagtacgagcataatccagagaatacacaa 736
Query: 930 agaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttcc 989
|||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 735 agaagagagagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttcc 676
Query: 990 agtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaa 1049
|||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||||
Sbjct: 675 agtaaccatccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaa 616
Query: 1050 agttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtg 1109
||||||| ||||| || || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 615 agttcaaggcctgggtaggaaagtaacggatgacattagcagtgttccctctccacagtg 556
Query: 1110 agacaaaaccctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
| | ||| ||||| | ||||| ||||||||||||||| ||||||| |||||
Sbjct: 555 caatcacaccttcatccttaattgtgcggccaaagcagtccgcaatacctttgta 501
>dbj|AK103134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D07, full
insert sequence
Length = 1606
Score = 751 bits (379), Expect = 0.0
Identities = 676/775 (87%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 1278 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 1219
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 1218 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 1159
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 1158 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 1099
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 1098 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 1039
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 1038 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 979
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 978 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 919
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 918 gatagacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 859
Query: 810 cactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccaccct 869
|| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 858 cagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccaccct 799
Query: 870 tctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaa 929
|||||||||||||||||||||| |||| ||| ||||| || || ||||||||||| ||||
Sbjct: 798 tctttgcagccttggcatcattagccagacgagtacgagcataatccagagaatacacaa 739
Query: 930 agaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttcc 989
| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 738 acaagagagagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttcc 679
Query: 990 agtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaa 1049
|||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||||
Sbjct: 678 agtaaccatccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaa 619
Query: 1050 agttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtg 1109
||||||| ||||| || || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 618 agttcaaggcctgggtaggaaagtaacggatgacattagcagtgttccctctccacagtg 559
Query: 1110 agacaaaaccctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
| | ||| ||||| | ||||| ||||||||||||||| ||||||| |||||
Sbjct: 558 caatcacaccttcatccttaattgtgcggccaaagcagtccgcaatacctttgta 504
>dbj|AK103615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K22, full
insert sequence
Length = 1559
Score = 751 bits (379), Expect = 0.0
Identities = 676/775 (87%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 1282 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 1223
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 1222 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 1163
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 1162 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 1103
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 1102 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 1043
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 1042 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 983
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 982 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 923
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 922 gatagacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 863
Query: 810 cactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccaccct 869
|| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 862 cagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccaccct 803
Query: 870 tctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaa 929
|||||||||||||||||||||| |||| ||| ||||| || || ||||||||||| ||||
Sbjct: 802 tctttgcagccttggcatcattagccagacgagtacgagcataatccagagaatacacaa 743
Query: 930 agaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttcc 989
| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 742 acaagagagagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttcc 683
Query: 990 agtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaa 1049
|||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||||
Sbjct: 682 agtaaccatccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaa 623
Query: 1050 agttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtg 1109
||||||| ||||| || || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 622 agttcaaggcctgggtaggaaagtaacggatgacattagcagtgttccctctccacagtg 563
Query: 1110 agacaaaaccctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
| | ||| ||||| | ||||| ||||||||||||||| ||||||| |||||
Sbjct: 562 caatcacaccttcatccttaattgtgcggccaaagcagtccgcaatacctttgta 508
>gb|CB674992.1|CB674992 OSJNEe10G10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10G10 3', mRNA sequence
Length = 820
Score = 571 bits (288), Expect = e-160
Identities = 513/588 (87%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 233 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 292
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 293 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 352
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 353 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 412
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 413 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 472
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 473 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 532
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 533 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 592
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 593 gatagacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 652
Query: 810 cactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccaccct 869
|| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 653 cagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccaccct 712
Query: 870 tctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaa 929
|||||||||||||||||||||| |||| ||| ||||| || || ||||||||||| ||||
Sbjct: 713 tctttgcagccttggcatcattagccagacgagtacgagcataatccagagaatacacaa 772
Query: 930 agaatagagagcaagcaccagcagctccaccagaagccagatttccag 977
|||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 773 agaagagagagcaagcaccagcagctcctccagaagccaggtttccag 820
>gb|CB662208.1|CB662208 OSJNEd06A07.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06A07 3', mRNA sequence
Length = 745
Score = 486 bits (245), Expect = e-134
Identities = 449/517 (86%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 221 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 280
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 281 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 340
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 341 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 400
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 401 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 460
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 461 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 520
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 521 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 580
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 581 gatagacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 640
Query: 810 cactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccaccct 869
|| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 641 cagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccaccct 700
Query: 870 tctttgcagccttggcatcattggccaaacgcgtacg 906
|||||||||||||||||||||| |||| ||| |||||
Sbjct: 701 tctttgcagccttggcatcattagccagacgagtacg 737
>gb|CB643997.1|CB643997 OSJNEb05A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05A03 3', mRNA sequence
Length = 829
Score = 480 bits (242), Expect = e-132
Identities = 437/502 (87%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 326 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 385
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 386 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 445
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 446 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 505
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 506 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 565
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 566 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 625
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 626 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 685
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 686 gatagacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 745
Query: 810 cactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccaccct 869
|| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 746 cagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccaccct 805
Query: 870 tctttgcagccttggcatcatt 891
||||||||||||||||||||||
Sbjct: 806 tctttgcagccttggcatcatt 827
>gb|AU065707.1|AU065707 AU065707 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E51095_1A,
mRNA sequence
Length = 460
Score = 416 bits (210), Expect = e-113
Identities = 318/354 (89%)
Strand = Plus / Minus
Query: 756 caatgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactgg 815
||||||| || ||||| || || |||||||||||||| || ||| |||||||||| |
Sbjct: 375 caatgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacg 316
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||
Sbjct: 315 caagggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttg 256
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
|||||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |
Sbjct: 255 cagccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaaga 196
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacc 995
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 195 gagagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaac 136
Query: 996 catccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttca 1055
||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||
Sbjct: 135 catccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttca 76
Query: 1056 atgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtg 1109
| ||||| || || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 75 aggcctgggtaggaaagtaacggatgacattagcagtgttccctctccacagtg 22
>gb|CB643996.1|CB643996 OSJNEb05A03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05A03 5', mRNA sequence
Length = 864
Score = 410 bits (207), Expect = e-112
Identities = 324/363 (89%)
Strand = Plus / Minus
Query: 802 aataccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctc 861
|||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct: 853 aataccatcagacgcaagggtcttgcggtaaacatcaacaagtccattgaattgcctccc 794
Query: 862 accacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagaga 921
|||||||||||||||||||||||||||||| |||| ||| ||||| || || ||||||||
Sbjct: 793 accacccttctttgcagccttggcatcattagccagacgagtacgagcataatccagaga 734
Query: 922 atagacaaagaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaa 981
||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 733 atacacaaagaagagagagcaagcaccagcagctcctccagaagccaggtttccagcaaa 674
Query: 982 ccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatcctt 1041
|||||||||||| |||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 673 ccacttccagtaaccatccttgtccttcttaaagttgaacatgcgcttgaaatggtcttt 614
Query: 1042 gaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctct 1101
||| ||||||||||| ||||| || || |||||||||||||||||||| ||||| |||||
Sbjct: 613 gaaggcaaagttcaaggcctgggtaggaaagtaacggatgacattagcagtgttccctct 554
Query: 1102 ccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtccccaataccctt 1161
|||||||| | | ||| ||||| | ||||| ||||||||||||||| ||||||| ||
Sbjct: 553 ccacagtgcaatcacaccttcatccttaattgtgcggccaaagcagtccgcaataccttt 494
Query: 1162 gta 1164
|||
Sbjct: 493 gta 491
>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
OJ1234_D05, complete sequence
Length = 107476
Score = 389 bits (196), Expect = e-105
Identities = 322/364 (88%)
Strand = Plus / Plus
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
|||||||||| |||||||| || || |||||||| |||||||| || || || || |||
Sbjct: 22026 ccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccacgatagaca 22085
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggca 817
||||| || ||||| || || |||||||||||||| || ||| |||||||||| |||
Sbjct: 22086 atgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacgca 22145
Query: 818 agggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgca 877
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 22146 agggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgca 22205
Query: 878 gccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaataga 937
|||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |||
Sbjct: 22206 gccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagaga 22265
Query: 938 gagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccca 997
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 22266 gagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaacca 22325
Query: 998 tccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaat 1057
||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 22326 tccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaag 22385
Query: 1058 gcct 1061
||||
Sbjct: 22386 gcct 22389
Score = 311 bits (157), Expect = 6e-082
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 21510 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 21569
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 21570 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 21629
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 21630 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 21689
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 21690 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 21749
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 21750 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 21809
Query: 690 g 690
|
Sbjct: 21810 g 21810
Score = 77.8 bits (39), Expect = 2e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 22470 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 22529
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 22530 attgtgcggccaaagcagtccgcaatacctttgta 22564
>gb|AACV01011667.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011667, whole
genome shotgun sequence
Length = 51647
Score = 389 bits (196), Expect = e-105
Identities = 322/364 (88%)
Strand = Plus / Plus
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
|||||||||| |||||||| || || |||||||| |||||||| || || || || |||
Sbjct: 17234 ccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccacgatagaca 17293
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggca 817
||||| || ||||| || || |||||||||||||| || ||| |||||||||| |||
Sbjct: 17294 atgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacgca 17353
Query: 818 agggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgca 877
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 17354 agggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgca 17413
Query: 878 gccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaataga 937
|||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |||
Sbjct: 17414 gccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagaga 17473
Query: 938 gagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccca 997
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 17474 gagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaacca 17533
Query: 998 tccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaat 1057
||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 17534 tccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaag 17593
Query: 1058 gcct 1061
||||
Sbjct: 17594 gcct 17597
Score = 311 bits (157), Expect = 6e-082
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 16718 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 16777
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 16778 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 16837
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 16838 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 16897
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 16898 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 16957
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 16958 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 17017
Query: 690 g 690
|
Sbjct: 17018 g 17018
Score = 77.8 bits (39), Expect = 2e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 17678 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 17737
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 17738 attgtgcggccaaagcagtccgcaatacctttgta 17772
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 389 bits (196), Expect = e-105
Identities = 322/364 (88%)
Strand = Plus / Plus
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
|||||||||| |||||||| || || |||||||| |||||||| || || || || |||
Sbjct: 1011138 ccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccacgatagaca 1011197
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggca 817
||||| || ||||| || || |||||||||||||| || ||| |||||||||| |||
Sbjct: 1011198 atgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacgca 1011257
Query: 818 agggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgca 877
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 1011258 agggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgca 1011317
Query: 878 gccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaataga 937
|||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |||
Sbjct: 1011318 gccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagaga 1011377
Query: 938 gagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccca 997
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 1011378 gagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaacca 1011437
Query: 998 tccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaat 1057
||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 1011438 tccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaag 1011497
Query: 1058 gcct 1061
||||
Sbjct: 1011498 gcct 1011501
Score = 311 bits (157), Expect = 6e-082
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 1010622 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 1010681
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 1010682 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 1010741
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 1010742 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 1010801
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 1010802 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 1010861
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 1010862 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 1010921
Query: 690 g 690
|
Sbjct: 1010922 g 1010922
Score = 77.8 bits (39), Expect = 2e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 1011582 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 1011641
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 1011642 attgtgcggccaaagcagtccgcaatacctttgta 1011676
>gb|CH401204.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000041 genomic
scaffold, whole genome shotgun sequence
Length = 2540762
Score = 389 bits (196), Expect = e-105
Identities = 322/364 (88%)
Strand = Plus / Plus
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
|||||||||| |||||||| || || |||||||| |||||||| || || || || |||
Sbjct: 1017386 ccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccacgatagaca 1017445
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggca 817
||||| || ||||| || || |||||||||||||| || ||| |||||||||| |||
Sbjct: 1017446 atgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacgca 1017505
Query: 818 agggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgca 877
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 1017506 agggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgca 1017565
Query: 878 gccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaataga 937
|||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |||
Sbjct: 1017566 gccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagaga 1017625
Query: 938 gagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccca 997
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 1017626 gagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaacca 1017685
Query: 998 tccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaat 1057
||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 1017686 tccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaag 1017745
Query: 1058 gcct 1061
||||
Sbjct: 1017746 gcct 1017749
Score = 311 bits (157), Expect = 6e-082
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 1016870 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 1016929
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 1016930 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 1016989
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 1016990 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 1017049
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 1017050 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 1017109
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 1017110 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 1017169
Query: 690 g 690
|
Sbjct: 1017170 g 1017170
Score = 77.8 bits (39), Expect = 2e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 1017830 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 1017889
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 1017890 attgtgcggccaaagcagtccgcaatacctttgta 1017924
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 389 bits (196), Expect = e-105
Identities = 322/364 (88%)
Strand = Plus / Plus
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
|||||||||| |||||||| || || |||||||| |||||||| || || || || |||
Sbjct: 13282786 ccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccacgatagaca 13282845
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggca 817
||||| || ||||| || || |||||||||||||| || ||| |||||||||| |||
Sbjct: 13282846 atgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacgca 13282905
Query: 818 agggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgca 877
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 13282906 agggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgca 13282965
Query: 878 gccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaataga 937
|||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |||
Sbjct: 13282966 gccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagaga 13283025
Query: 938 gagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccca 997
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 13283026 gagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaacca 13283085
Query: 998 tccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaat 1057
||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 13283086 tccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaag 13283145
Query: 1058 gcct 1061
||||
Sbjct: 13283146 gcct 13283149
Score = 311 bits (157), Expect = 6e-082
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 13282270 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 13282329
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 13282330 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 13282389
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 13282390 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 13282449
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 13282450 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 13282509
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 13282510 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 13282569
Query: 690 g 690
|
Sbjct: 13282570 g 13282570
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 1192 agatggggagctgctacaagaaggagatcttcaacgagcatgtgcagcagggcgtcctgg 1251
|||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 19991204 agatggggagcttctacaagaaggagatcttcaacgatcacgtgcagcagggcgtgctgg 19991145
Query: 1252 gctgggctcagaaggtcaagatga 1275
||||||| ||||||||||||||||
Sbjct: 19991144 gctgggcacagaaggtcaagatga 19991121
Score = 77.8 bits (39), Expect = 2e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 13283230 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 13283289
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 13283290 attgtgcggccaaagcagtccgcaatacctttgta 13283324
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 389 bits (196), Expect = e-105
Identities = 322/364 (88%)
Strand = Plus / Plus
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
|||||||||| |||||||| || || |||||||| |||||||| || || || || |||
Sbjct: 13477980 ccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccacgatagaca 13478039
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggca 817
||||| || ||||| || || |||||||||||||| || ||| |||||||||| |||
Sbjct: 13478040 atgataccaacacaggagatgttgaatccacggtacagaccagcaataccatcagacgca 13478099
Query: 818 agggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgca 877
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 13478100 agggtcttgcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgca 13478159
Query: 878 gccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaataga 937
|||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| |||
Sbjct: 13478160 gccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagaga 13478219
Query: 938 gagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccca 997
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 13478220 gagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaacca 13478279
Query: 998 tccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaat 1057
||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 13478280 tccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaag 13478339
Query: 1058 gcct 1061
||||
Sbjct: 13478340 gcct 13478343
Score = 311 bits (157), Expect = 6e-082
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 13477464 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 13477523
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 13477524 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 13477583
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 13477584 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 13477643
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 13477644 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 13477703
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 13477704 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 13477763
Query: 690 g 690
|
Sbjct: 13477764 g 13477764
Score = 127 bits (64), Expect = 2e-026
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 1192 agatggggagctgctacaagaaggagatcttcaacgagcatgtgcagcagggcgtcctgg 1251
|||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 20341424 agatggggagcttctacaagaaggagatcttcaacgatcacgtgcagcagggcgtgctgg 20341365
Query: 1252 gctgggctcagaaggtcaagatga 1275
||||||| ||||||||||||||||
Sbjct: 20341364 gctgggcacagaaggtcaagatga 20341341
Score = 77.8 bits (39), Expect = 2e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 13478424 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 13478483
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 13478484 attgtgcggccaaagcagtccgcaatacctttgta 13478518
>gb|AU063863.1|AU063863 AU063863 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1256_1A, mRNA sequence
Length = 413
Score = 387 bits (195), Expect = e-104
Identities = 308/346 (89%)
Strand = Plus / Minus
Query: 819 gggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcag 878
||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 396 gggtctttcggtaaacatcaacaagtccattgaattgcctcccaccacccttctttgcag 337
Query: 879 ccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagag 938
||||||||||||| |||| ||| ||||| || || ||||||||||| |||||||| ||||
Sbjct: 336 ccttggcatcattagccagacgagtacgagcataatccagagaatacacaaagaagagag 277
Query: 939 agcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccat 998
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 276 agcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccagtaaccat 217
Query: 999 ccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatg 1058
|| ||||||||||||||||||||||||||||||| || || ||||| ||||||||||| |
Sbjct: 216 ccntgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaagg 157
Query: 1059 cctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaac 1118
|||| || || |||||||||||||||||||| ||||| ||||||||||||| | | ||
Sbjct: 156 cctgggtaggaaagtaacggatgacattagcagtgttccctctccacagtgcaatcacac 97
Query: 1119 cctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
| ||||| | ||||| ||||||||||||||| ||||||| |||||
Sbjct: 96 cttcatccttaattgtgcggccaaagcagtccgcaatacctttgta 51
>gb|CB674991.1|CB674991 OSJNEe10G10.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10G10 5', mRNA sequence
Length = 824
Score = 379 bits (191), Expect = e-102
Identities = 299/335 (89%)
Strand = Plus / Minus
Query: 830 taaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatca 889
||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 824 taaacatcaacaagtccattgaattgcctcccaccacccttctttgcagccttggcatca 765
Query: 890 ttggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcacca 949
|| |||| ||| ||||| || || ||||||||||| |||||||| |||||||||||||||
Sbjct: 764 ttagccagacgagtacgagcataatccagagaatacacaaagaagagagagcaagcacca 705
Query: 950 gcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttc 1009
|||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 704 gcagctcctccagaagccaggtttccagcaaaccacttccagtaaccatccttgtccttc 645
Query: 1010 ttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgggg 1069
||||||||||||||||||||||| || || ||||| ||||||||||| ||||| || ||
Sbjct: 644 ttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaaggcctgggtagga 585
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
|||||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| |
Sbjct: 584 aagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcctta 525
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
||||| ||||||||||||||| ||||||| |||||
Sbjct: 524 attgtgcggccaaagcagtccgcaatacctttgta 490
>gb|CB662207.1|CB662207 OSJNEd06A07.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06A07 5', mRNA sequence
Length = 831
Score = 369 bits (186), Expect = 3e-099
Identities = 301/338 (89%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 827 cggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggca 886
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 831 cggtaaacatcaacaagtccattgat-tgcctcccaccacccttctttgcagccttggca 773
Query: 887 tcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagca 946
||||| |||| ||| ||||| || || ||||||||||| |||||||| ||||||||||||
Sbjct: 772 tcattagccagacgagtacgagcataatccagagaatacacaaagaagagagagcaagca 713
Query: 947 ccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcc 1006
||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 712 ccagcagctcctccagaagccaggtttccagcaaaccacttccagtaaccatccttgtcc 653
Query: 1007 ttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtg 1066
|||||||||||||||||||||||||| || || ||||| ||||||||||| ||||| ||
Sbjct: 652 ttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaaggcctgggta 593
Query: 1067 gggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatct 1126
|| |||||||||||||||||||| ||||| ||||||||||||| | | ||| |||||
Sbjct: 592 ggaaagtaacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatcc 533
Query: 1127 ctgattgtccggccaaagcagtccccaatacccttgta 1164
| ||||| ||||||||||||||| ||||||| |||||
Sbjct: 532 ttaattgtgcggccaaagcagtccgcaatacctttgta 495
>gb|AU063905.1|AU063905 AU063905 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1902_1A, mRNA sequence
Length = 409
Score = 363 bits (183), Expect = 2e-097
Identities = 313/353 (88%), Gaps = 3/353 (0%)
Strand = Plus / Minus
Query: 815 gcaagggtcttgcgg-taaacatcaacgagtccattgaactgcctctc-accacccttct 872
||||||||||||||| ||||||||||| ||||||||||| |||||| | |||||||||||
Sbjct: 403 gcaagggtcttgcgggtaaacatcaacaagtccattgaattgcctccccaccacccttct 344
Query: 873 ttgcagccttggcatcatt-ggccaaacgcgtacgggcgtagtccagagaatagacaaag 931
||||||| ||||||||||| | ||| ||| ||||| || || ||||||||||| ||||||
Sbjct: 343 ttgcagcnttggcatcattagnccagacgagtacgagcataatccagagaatacacaaag 284
Query: 932 aatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccag 991
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 283 aagagagagcaagcaccagcagctcctccagaagccaggtttccagcaaaccacttccag 224
Query: 992 tacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaag 1051
|| |||||||||||||||||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 223 taaccatccttgtccttcttaaagttgaacatgcgcttgaaatggtctttgaaggcaaag 164
Query: 1052 ttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgag 1111
||||| ||||| || || |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 163 ttcaaggcctgggtaggaaagtaacggatgacattagcagtgttccctctccacagtgca 104
Query: 1112 acaaaaccctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
| | ||| ||||| | ||||| ||||||||||||||| ||||||| |||||
Sbjct: 103 atcacaccttcatccttaattgtgcggccaaagcagtccgcaatacctttgta 51
>gb|AU055896.1|AU055896 AU055896 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S20134_2Z, mRNA sequence
Length = 712
Score = 357 bits (180), Expect = 1e-095
Identities = 361/422 (85%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 441 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 382
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 381 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 322
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | |||| |||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 321 gtgacttcgcacccnccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 262
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 261 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 202
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 201 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 142
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || || |
Sbjct: 141 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagcccac 82
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| | |||||||| || ||||| || || |||||||||||||| || ||| ||||||||
Sbjct: 81 gatngacaatgataccaacacaggagatgttgaatccacggtacagaccagcaataccat 22
Query: 810 ca 811
||
Sbjct: 21 ca 20
>gb|AU030256.1|AU030256 AU030256 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50821_2Z, mRNA sequence
Length = 617
Score = 341 bits (172), Expect = 7e-091
Identities = 307/352 (87%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 382 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 323
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 322 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 263
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 262 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 203
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 202 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 143
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 142 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 83
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagta 741
| ||| | |||||||||| |||||||| || || |||||||| ||||||||
Sbjct: 82 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagta 31
>gb|AU094027.1|AU094027 AU094027 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1902, mRNA sequence
Length = 700
Score = 339 bits (171), Expect = 3e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 388 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 329
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 328 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 269
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 268 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 209
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 208 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 149
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 148 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 89
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
| ||| | |||||||||| |||||||| || || |||||||| |||||||
Sbjct: 88 gaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagt 38
>gb|AU165461.1|AU165461 AU165461 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1256, mRNA sequence
Length = 713
Score = 337 bits (170), Expect = 1e-089
Identities = 306/352 (86%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 401 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 342
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 341 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 282
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 281 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 222
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 221 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 162
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 161 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 102
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagta 741
| ||||| |||||||||| |||||||| || | |||||||| |||||||
Sbjct: 101 gaagggtgccaacaagaacgactggcttgagagnatcatacattncaaagta 50
>gb|AU030462.1|AU030462 AU030462 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E51095_4Z, mRNA sequence
Length = 718
Score = 331 bits (167), Expect = 7e-088
Identities = 330/383 (86%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 481 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 422
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 421 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 362
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 361 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 302
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 301 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 242
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
||||||||||||||||||| || ||||| || || ||||||||||| | |||||||||||
Sbjct: 241 caaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcct 182
Query: 690 -gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacct 748
| ||| | |||||||||| |||||||| || || |||||||| |||||||| || ||
Sbjct: 181 ggaaggttgccaacaagaacgactggcttgagagaatcatacattccaaagtacagccca 122
Query: 749 cggtacacaatgatccccacaca 771
|| || |||||||| || |||||
Sbjct: 121 cgatagacaatgataccaacaca 99
>gb|AU032164.1|AU032164 AU032164 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3646_4Z, mRNA sequence
Length = 681
Score = 307 bits (155), Expect = 1e-080
Identities = 306/354 (86%), Gaps = 2/354 (0%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 417 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 358
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 357 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 298
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 297 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 238
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
|||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || |
Sbjct: 237 tgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaag 178
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagct-ggctaagaagttatcc 688
|||||||||| |||||||| || ||||| || || |||||||| ||| | ||||||||||
Sbjct: 177 caaggccagcgccaatggtaatgccccaaccaagtaagaagctgggcaaggaagttatcc 118
Query: 689 tgcagggtaccaacaagaa-gcactggcttcagggagtcatacataccaaagta 741
|| ||| | |||||||||| | |||||||| || || |||||||| |||||||
Sbjct: 117 tgaaggttgccaacaagaacggactggcttgagagaatcatacattncaaagta 64
>gb|CA997872.1|CA997872 S234B1_F03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 673
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 550 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 491
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 490 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 433
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 432 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 373
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 372 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 313
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 312 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 253
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 252 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 193
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 192 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 133
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 132 tgatagtgcgtccgaagcagtccccaatacccttgta 96
>dbj|D12637.1|RICATADPT Oryza sativa (japonica cultivar-group) mRNA for ATP/ADP translocator,
complete cds
Length = 1564
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 942 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 883
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 882 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 825
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 824 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 765
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 764 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 705
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 704 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 645
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 644 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 585
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 584 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 525
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 524 tgatagtgcgtccgaagcagtccccaatacccttgta 488
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1194 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1135
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1134 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1075
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1074 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1015
Query: 638 gcacc 642
|||||
Sbjct: 1014 gcacc 1010
>dbj|AK073448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045A20, full
insert sequence
Length = 1618
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 995 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 936
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 935 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 878
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 877 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 818
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 817 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 758
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 757 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 698
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 697 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 638
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 637 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 578
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 577 tgatagtgcgtccgaagcagtccccaatacccttgta 541
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1247 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1188
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1187 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1128
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1127 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1068
Query: 638 gcacc 642
|||||
Sbjct: 1067 gcacc 1063
>dbj|AK119207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E01, full
insert sequence
Length = 1578
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 955 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 896
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 895 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 838
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 837 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 778
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 777 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 718
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 717 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 658
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 657 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 598
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 597 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 538
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 537 tgatagtgcgtccgaagcagtccccaatacccttgta 501
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1207 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1148
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1147 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1088
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1087 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1028
Query: 638 gcacc 642
|||||
Sbjct: 1027 gcacc 1023
>ref|XM_467495.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1577
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 954 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 895
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 894 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 837
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 836 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 777
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 776 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 717
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 716 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 657
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 656 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 597
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 596 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 537
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 536 tgatagtgcgtccgaagcagtccccaatacccttgta 500
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1206 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1147
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1146 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1087
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1086 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1027
Query: 638 gcacc 642
|||||
Sbjct: 1026 gcacc 1022
>ref|XM_506941.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ2056_H01.33 mRNA
Length = 1619
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 996 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 937
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 936 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 879
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 878 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 819
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 818 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 759
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 758 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 699
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 698 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 639
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 638 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 579
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 578 tgatagtgcgtccgaagcagtccccaatacccttgta 542
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1248 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1189
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1188 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1129
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1128 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1069
Query: 638 gcacc 642
|||||
Sbjct: 1068 gcacc 1064
>ref|XM_507526.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ2056_H01.33 mRNA
Length = 1578
Score = 283 bits (143), Expect = 1e-073
Identities = 380/457 (83%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 955 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 896
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 895 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 838
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 837 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 778
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 777 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 718
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 717 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 658
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 657 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 598
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 597 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 538
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 537 tgatagtgcgtccgaagcagtccccaatacccttgta 501
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1207 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1148
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1147 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1088
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1087 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1028
Query: 638 gcacc 642
|||||
Sbjct: 1027 gcacc 1023
>dbj|AK100143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011P12, full
insert sequence
Length = 1577
Score = 276 bits (139), Expect = 4e-071
Identities = 379/457 (82%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| | |||
Sbjct: 954 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgatttcaaca 895
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 894 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 837
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 836 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 777
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 776 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 717
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 716 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 657
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 656 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 597
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 596 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 537
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||||||||||||||||||||||
Sbjct: 536 tgatagtgcgtccgaagcagtccccaatacccttgta 500
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 1206 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 1147
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 1146 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 1087
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 1086 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 1027
Query: 638 gcacc 642
|||||
Sbjct: 1026 gcacc 1022
>gb|CB643568.1|CB643568 OSJNEb04F08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04F08 5', mRNA sequence
Length = 836
Score = 272 bits (137), Expect = 5e-070
Identities = 374/451 (82%), Gaps = 4/451 (0%)
Strand = Plus / Minus
Query: 716 ttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaagat 775
||||| || |||||||| |||||||| ||||| ||||| |||||||| || ||||| ||
Sbjct: 821 ttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaacacatgag 762
Query: 776 atattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaa 833
|| || ||||||||||| | ||| ||| ||||| ||| | || |||||||||||||
Sbjct: 761 atgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgcggtaaa 704
Query: 834 catcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattgg 893
|||| || || |||||||||||||| ||||| || ||| |||||||| ||||||||||
Sbjct: 703 catccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcatcattgg 644
Query: 894 ccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcag 953
|||| | || | || ||||| || || || ||||| || ||||| ||||||||||||
Sbjct: 643 ccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcaccagcag 584
Query: 954 ctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaa 1013
| |||||||| || || || ||| |||||||||||||||| ||||||||||| ||||| |
Sbjct: 583 caccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctttcttga 524
Query: 1014 agttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagt 1073
||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 523 agttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtggggaagt 464
Query: 1074 aacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattg 1133
||||||| ||||| || |||||||||||||||| ||| ||||||||||||| |||| |
Sbjct: 463 aacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatccttgatag 404
Query: 1134 tccggccaaagcagtccccaatacccttgta 1164
| || || |||||||||||||||||||||||
Sbjct: 403 tgcgtccgaagcagtccccaatacccttgta 373
>gb|CB650964.1|CB650964 OSJNEb15L12.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15L12 5', mRNA sequence
Length = 786
Score = 272 bits (137), Expect = 5e-070
Identities = 374/451 (82%), Gaps = 4/451 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 449 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 390
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 389 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 332
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 331 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 272
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 271 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 212
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 211 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 152
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 151 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 92
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 91 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatcct 32
Query: 1128 tgattgtccggccaaagcagtccccaatacc 1158
|||| || || || |||||||||||||||||
Sbjct: 31 tgatagtgcgtccgaagcagtccccaatacc 1
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 701 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 642
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 641 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 582
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 581 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 522
Query: 638 gcacc 642
|||||
Sbjct: 521 gcacc 517
>gb|C28991.1|C28991 C28991 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C63079_1A, mRNA sequence
Length = 306
Score = 270 bits (136), Expect = 2e-069
Identities = 252/291 (86%)
Strand = Plus / Minus
Query: 449 ccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaag 508
|||||||| |||||||||||||| ||||| || || ||||| || ||||| | |||||||
Sbjct: 291 ccagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcncttgaag 232
Query: 509 agggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtac 568
|| ||||| | ||||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 231 agtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtac 172
Query: 569 ttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggag 628
||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||| ||
Sbjct: 171 ttgacagcctcaccagatgtcatcatcatccgacgacgaacagtgtcgattgggtatgaa 112
Query: 629 gcaaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcc 688
|||||||||||||||||||| || ||||| || || ||||||||||| | ||||||||||
Sbjct: 111 gcaaggccagcaccaatggtaatgccccaaccaagtaagaagctggcaaggaagttatcc 52
Query: 689 tgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaag 739
|| ||| | |||||||||| |||||||| || || |||||||| ||||||
Sbjct: 51 tgaaggttgccaacaagaacgactggcttgagagaatcatacattccaaag 1
>gb|CB643532.1|CB643532 OSJNEb04E07.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04E07 5', mRNA sequence
Length = 771
Score = 262 bits (132), Expect = 5e-067
Identities = 291/344 (84%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcc 880
||||||||||||||||| || || |||||||||||||| ||||| || ||| ||||||
Sbjct: 713 gtcttgcggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagcc 654
Query: 881 ttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagag 940
|| |||||||||||||| | || | || ||||| || || || ||||| || |||||
Sbjct: 653 ttcgcatcattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagat 594
Query: 941 caagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcc 1000
||||||||||||| |||||||| || || || ||| |||||||||||||||| ||||||
Sbjct: 593 gaagcaccagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatcc 534
Query: 1001 ttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcc 1060
||||| ||||| |||||||||| | |||||||| ||||||||| ||||||||||| |||
Sbjct: 533 ttgtctttcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcc 474
Query: 1061 tgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccc 1120
|| ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||||||
Sbjct: 473 tgggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccc 414
Query: 1121 tcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
||||| |||| || || || |||||||||||||||||||||||
Sbjct: 413 tcatccttgatagtgcgtccgaagcagtccccaatacccttgta 370
>gb|CB646017.1|CB646017 OSJNEb08C13.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08C13 5', mRNA sequence
Length = 882
Score = 262 bits (132), Expect = 5e-067
Identities = 291/344 (84%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcc 880
||||||||||||||||| || || |||||||||||||| ||||| || ||| ||||||
Sbjct: 835 gtcttgcggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagcc 776
Query: 881 ttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagag 940
|| |||||||||||||| | || | || ||||| || || || ||||| || |||||
Sbjct: 775 ttcgcatcattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagat 716
Query: 941 caagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcc 1000
||||||||||||| |||||||| || || || ||| |||||||||||||||| ||||||
Sbjct: 715 gaagcaccagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatcc 656
Query: 1001 ttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcc 1060
||||| ||||| |||||||||| | |||||||| ||||||||| ||||||||||| |||
Sbjct: 655 ttgtctttcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcc 596
Query: 1061 tgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccc 1120
|| ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||||||
Sbjct: 595 tgggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccc 536
Query: 1121 tcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
||||| |||| || || || |||||||||||||||||||||||
Sbjct: 535 tcatccttgatagtgcgtccgaagcagtccccaatacccttgta 492
>gb|CF323606.1|CF323606 HDN--04-E18.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-E18, mRNA sequence
Length = 605
Score = 254 bits (128), Expect = 1e-064
Identities = 347/418 (83%), Gaps = 4/418 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 435 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 376
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 375 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 318
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 317 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 258
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 257 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 198
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 197 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 138
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 137 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 78
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatc 1125
||||||||||||| ||||| || |||||||||||||||| ||| |||||||||||||
Sbjct: 77 ggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccctcatc 20
Score = 69.9 bits (35), Expect = 4e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 544 gaaagcgtccaaggagctgttgtacttgacggcctcaccagatgtcatcatcatgcgacg 603
|||||| |||| |||||| ||||||||||| ||||| ||||| ||||||||||| | |
Sbjct: 601 gaaagcatccatggagctcttgtacttgacagcctctccagaggtcatcatcatccttct 542
Query: 604 gcgaacagtgtcaatggggtaggaggcaaggccagcacc 642
||| || || ||||||||||| |||||||| || |||||
Sbjct: 541 gcggacggtatcaatggggtaagaggcaagacctgcacc 503
>gb|D47395.1|D47395 RICS12780A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 484
Score = 246 bits (124), Expect = 3e-062
Identities = 222/252 (88%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 915 ccagagaatagacaaagaatagagagcaagcaccagcagct-ccaccagaagccagattt 973
|||||||||| |||||||| ||||||||||||||||||||| || ||||||||||| |||
Sbjct: 426 ccagagaatacacaaagaagagagagcaagcaccagcagctncctccagaagccaggttt 367
Query: 974 ccagcaaaccacttccagtacccatcc-ttgtccttcttaaagttgaacatgcgcttgaa 1032
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 366 ccagcaaaccacttccagtaaccatcccttgtccttcttaaagttgaacatgcgcttgaa 307
Query: 1033 gtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgt 1092
|| | ||||| ||||||||||| ||||| || || |||||||||||||||||||| ||
Sbjct: 306 atggcctttgaaggcaaagttcaaggcctgggtaggaaagtaacggatgacattagcagt 247
Query: 1093 gtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtcccc 1152
||| ||||||||||||| | | ||| ||||| | ||||| ||||||||||||||| |
Sbjct: 246 gttccctctccacagtgcaatcacaccttcatccttaattgtgcggccaaagcagtccgc 187
Query: 1153 aatacccttgta 1164
|||||| |||||
Sbjct: 186 aatacctttgta 175
>gb|CB675587.1|CB675587 OSJNEe11G19.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11G19 5', mRNA sequence
Length = 847
Score = 240 bits (121), Expect = 2e-060
Identities = 331/399 (82%), Gaps = 4/399 (1%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 409 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 350
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 349 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 292
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 291 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 232
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 231 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 172
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 171 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 112
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||
Sbjct: 111 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcctgggtgg 52
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccaca 1106
||||||||||||| ||||| || ||||||||||||||||
Sbjct: 51 ggaagtaacggatcacattggcagtgtttcctctccaca 13
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 661 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 602
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 601 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 542
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 541 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 482
Query: 638 gcacc 642
|||||
Sbjct: 481 gcacc 477
>gb|AU181974.1|AU181974 AU181974 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C62069, mRNA sequence
Length = 456
Score = 234 bits (118), Expect = 1e-058
Identities = 190/214 (88%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 218 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 159
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 158 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 99
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 98 gtgacttcgcaccctccttcgcaacaatctgcttgaacgcatccaaggagctgttgtact 39
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacg 603
|||| ||||||||||||||||||||||| |||||
Sbjct: 38 tgacagcctcaccagatgtcatcatcatccgacg 5
>gb|CB682360.1|CB682360 OSJNEf09J13.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09J13 5', mRNA sequence
Length = 755
Score = 220 bits (111), Expect = 2e-054
Identities = 195/223 (87%)
Strand = Plus / Minus
Query: 942 aagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcct 1001
||||||||||||| |||||||| || || || ||| |||||||||||||||| |||||||
Sbjct: 698 aagcaccagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatcct 639
Query: 1002 tgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcct 1061
|||| ||||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||
Sbjct: 638 tgtctttcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcct 579
Query: 1062 gtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccct 1121
| ||||||||||||||||| ||||| || |||||||||||||||| ||| |||||||||
Sbjct: 578 gggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccct 519
Query: 1122 catctctgattgtccggccaaagcagtccccaatacccttgta 1164
|||| |||| || || || |||||||||||||||||||||||
Sbjct: 518 catccttgatagtgcgtccgaagcagtccccaatacccttgta 476
>gb|CB683212.1|CB683212 OSJNEf11E21.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11E21 5', mRNA sequence
Length = 770
Score = 220 bits (111), Expect = 2e-054
Identities = 195/223 (87%)
Strand = Plus / Minus
Query: 942 aagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcct 1001
||||||||||||| |||||||| || || || ||| |||||||||||||||| |||||||
Sbjct: 713 aagcaccagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatcct 654
Query: 1002 tgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcct 1061
|||| ||||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||
Sbjct: 653 tgtctttcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcct 594
Query: 1062 gtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccct 1121
| ||||||||||||||||| ||||| || |||||||||||||||| ||| |||||||||
Sbjct: 593 gggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccct 534
Query: 1122 catctctgattgtccggccaaagcagtccccaatacccttgta 1164
|||| |||| || || || |||||||||||||||||||||||
Sbjct: 533 catccttgatagtgcgtccgaagcagtccccaatacccttgta 491
>gb|CB685073.1|CB685073 OSJNEf15D07.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15D07 5', mRNA sequence
Length = 746
Score = 220 bits (111), Expect = 2e-054
Identities = 195/223 (87%)
Strand = Plus / Minus
Query: 942 aagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcct 1001
||||||||||||| |||||||| || || || ||| |||||||||||||||| |||||||
Sbjct: 711 aagcaccagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatcct 652
Query: 1002 tgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcct 1061
|||| ||||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||
Sbjct: 651 tgtctttcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcct 592
Query: 1062 gtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccct 1121
| ||||||||||||||||| ||||| || |||||||||||||||| ||| |||||||||
Sbjct: 591 gggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaaccct 532
Query: 1122 catctctgattgtccggccaaagcagtccccaatacccttgta 1164
|||| |||| || || || |||||||||||||||||||||||
Sbjct: 531 catccttgatagtgcgtccgaagcagtccccaatacccttgta 489
>gb|AU091711.1|AU091711 AU091711 Rice mature leaf Oryza sativa (japonica cultivar-group) cDNA
clone S20134, mRNA sequence
Length = 712
Score = 214 bits (108), Expect = 1e-052
Identities = 186/212 (87%)
Strand = Plus / Minus
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 712 gctcctccagaagccaggtttccagcaacccacttccagtaaccatccttgtccttctta 653
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|||||||||||||||||||| || || ||||| ||||||||||| ||||| || || |||
Sbjct: 652 aagttgaacatgcgcttgaaatggtctttgaaggcaaagttcaaggcctgggtaggaaag 593
Query: 1073 taacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgatt 1132
||||||||||||||||| ||||| ||||||||||||| | | ||| ||||| | |||
Sbjct: 592 taacggatgacattagcagtgttccctctccacagtgcaatcacaccttcatccttaatt 533
Query: 1133 gtccggccaaagcagtccccaatacccttgta 1164
|| ||||||||||||||| ||||||| |||||
Sbjct: 532 gtgcggccaaagcagtccgcaatacctttgta 501
>gb|AU096230.1|AU096230 AU096230 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12780, mRNA sequence
Length = 475
Score = 198 bits (100), Expect = 7e-048
Identities = 178/203 (87%), Gaps = 1/203 (0%)
Strand = Plus / Minus
Query: 390 cttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||||||| ||||||||||| || ||||| |||||||| |||||||| || |
Sbjct: 203 cttagccaccaccagaaccgtacttcttaccaaagacgaccacctgcagcttgtcatatc 144
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
||||||| |||||||||||||| ||||| || || ||||| || ||||| ||||||||||
Sbjct: 143 cagcaagcacaccagcaccagcaacagcacgcagaatgttagcaccagcgcccttgaaga 84
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
| ||||| | ||||||||| || |||||||| ||||| || |||||||||||||||||||
Sbjct: 83 gtgacttcgcaccctccttcgcaacaatctgnttgaacgcatccaaggagctgttgtact 24
Query: 570 tgacggcctca-ccagatgtcat 591
|||| |||||| |||||||||||
Sbjct: 23 tgacagcctcacccagatgtcat 1
>gb|D25150.1|D25150 RICR3368A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R3368_1A, mRNA sequence
Length = 274
Score = 194 bits (98), Expect = 1e-046
Identities = 221/262 (84%)
Strand = Plus / Minus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
|||||||||||||| ||||| || ||| |||||||| |||||||||||||| | ||
Sbjct: 274 ccattgaactgcctttcacctcctcccttggcagccttcgcatcattggccaaccttgtc 215
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
| || ||||| || || || ||||| || ||||| ||||||||||||| ||||||||
Sbjct: 214 ctagcatagtcaagggagtacacaaaaaacagagatgaagcaccagcagcaccaccagag 155
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
|| || || ||| |||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 154 gcaaggttgccaccaaaccacttccagtaaccatccttgtctttcttgaagttgaacagc 95
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| |||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 94 ctcttgaagtaatccttgaaagcaaagttcaaagcctgggtggggaagtaacggatcaca 35
Query: 1085 ttagctgtgtttcctctccaca 1106
|| || ||||||||||||||||
Sbjct: 34 ttggcagtgtttcctctccaca 13
>gb|C26502.1|C26502 C26502 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C12463_1A, mRNA sequence
Length = 289
Score = 184 bits (93), Expect = 1e-043
Identities = 185/217 (85%)
Strand = Plus / Minus
Query: 942 aagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcct 1001
||| ||||| ||| |||||||| || || || ||| |||||||||||||||| |||||||
Sbjct: 217 aagnaccagnagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatcct 158
Query: 1002 tgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcct 1061
|||| ||||| |||||||||| | |||||||| ||||||||| | ||||||||| ||||
Sbjct: 157 tgtctttcttgaagttgaacagcctcttgaagtaatccttgaaagnaaagttcaaagcct 98
Query: 1062 gtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccct 1121
| ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||||||
Sbjct: 97 gggtggggaagtaacggatnacattggcagtgtttcctctccacaatgaagtaaaaccct 38
Query: 1122 catctctgattgtccggccaaagcagtccccaatacc 1158
|||| |||| || || || |||||||||||||||||
Sbjct: 37 catccttgatagtgcgtccgaagcagtccccaatacc 1
>gb|AACV01005297.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005297, whole
genome shotgun sequence
Length = 63269
Score = 182 bits (92), Expect = 4e-043
Identities = 290/354 (81%), Gaps = 4/354 (1%)
Strand = Plus / Plus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 8065 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 8124
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 8125 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 8182
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 8183 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 8242
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 8243 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 8302
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 8303 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 8362
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcct 1061
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||
Sbjct: 8363 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcct 8416
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 1059 cctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaac 1118
|||| ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||||
Sbjct: 8692 cctgggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaac 8751
Query: 1119 cctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
||||||| |||| || || || |||||||||||||||||||||||
Sbjct: 8752 cctcatccttgatagtgcgtccgaagcagtccccaatacccttgta 8797
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Plus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 7731 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 7790
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 7791 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 7850
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 7851 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 7910
Query: 638 gcacc 642
|||||
Sbjct: 7911 gcacc 7915
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 182 bits (92), Expect = 4e-043
Identities = 290/354 (81%), Gaps = 4/354 (1%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
||||||||||| || |||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 5007907 actggcttcagagaatcatacattccaaagtacagaccacggtagacaatgattccaaca 5007848
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || || ||||||||||| | ||| ||| ||||| ||| | || |||||||
Sbjct: 5007847 catgagatgttaaatccacggtacaacccagcaatgccatctgacttg--agagtcttgc 5007790
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||||||||| || || |||||||||||||| ||||| || ||| |||||||| ||||
Sbjct: 5007789 ggtaaacatccacaaggccattgaactgcctttcacctcctcccttggcagccttcgcat 5007730
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
|||||||||| | || | || ||||| || || || ||||| || ||||| ||||||
Sbjct: 5007729 cattggccaaccttgtcctagcatagtcaagggagtacacaaaaaacagagatgaagcac 5007670
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
||||||| |||||||| || || || ||| |||||||||||||||| ||||||||||| |
Sbjct: 5007669 cagcagcaccaccagaggcaaggttgccaccaaaccacttccagtaaccatccttgtctt 5007610
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcct 1061
|||| |||||||||| | |||||||| ||||||||| ||||||||||| ||||
Sbjct: 5007609 tcttgaagttgaacagcctcttgaagtaatccttgaaagcaaagttcaaagcct 5007556
Score = 107 bits (54), Expect = 2e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 1059 cctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaac 1118
|||| ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||||
Sbjct: 5007280 cctgggtggggaagtaacggatcacattggcagtgtttcctctccacaatgaagcaaaac 5007221
Query: 1119 cctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
||||||| |||| || || || |||||||||||||||||||||||
Sbjct: 5007220 cctcatccttgatagtgcgtccgaagcagtccccaatacccttgta 5007175
Score = 81.8 bits (41), Expect = 1e-012
Identities = 149/185 (80%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || || |||||||| || |||||||||||||| || ||||||
Sbjct: 5008241 acaccagcaccagcaatggcacgtaggatgttggcaccagcacccttgaacagtgacttg 5008182
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || | ||||| |||||| |||| |||||| ||||||||||| |||
Sbjct: 5008181 gcaccctcgttcttcaggatctgggagaaagcatccatggagctcttgtacttgacagcc 5008122
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| ||||| ||||||||||| | | ||| || || ||||||||||| |||||||| ||
Sbjct: 5008121 tctccagaggtcatcatcatccttctgcggacggtatcaatggggtaagaggcaagacct 5008062
Query: 638 gcacc 642
|||||
Sbjct: 5008061 gcacc 5008057
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,807,333
Number of Sequences: 438736
Number of extensions: 1807333
Number of successful extensions: 8549
Number of sequences better than 0.5: 129
Number of HSP's better than 0.5 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7949
Number of HSP's gapped (non-prelim): 543
length of query: 1589
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1567
effective length of database: 2,790,767,724
effective search space: 4373133023508
effective search space used: 4373133023508
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)