BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Y13733
(1516 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE123932.1|BE123932 EST394057 DSIL Medicago truncatula c... 56 9e-006
gb|BF635808.1|BF635808 NF029F08DT1F1064 Drought Medicago tr... 56 9e-006
gb|BF644979.1|BF644979 NF019G06EC1F1051 Elicited cell cultu... 56 9e-006
gb|BF646508.1|BF646508 NF076A02EC1F1008 Elicited cell cultu... 56 9e-006
gb|BF650841.1|BF650841 NF101F08EC1F1073 Elicited cell cultu... 56 9e-006
gb|AW692803.2|AW692803 NF059G11ST1F1087 Developing stem Med... 56 9e-006
gb|BG645600.1|BG645600 EST507219 KV3 Medicago truncatula cD... 56 9e-006
gb|BI262784.1|BI262784 NF094A03EC1F1021 Elicited cell cultu... 56 9e-006
gb|BI308959.1|BI308959 EST530369 GPOD Medicago truncatula c... 56 9e-006
gb|BI309629.1|BI309629 EST531039 GPOD Medicago truncatula c... 56 9e-006
gb|BQ136060.1|BQ136060 NF032E09EC1F1070 Elicited cell cultu... 56 9e-006
gb|BQ139249.1|BQ139249 NF013B06PH1F1046 Phoma-infected Medi... 56 9e-006
gb|BQ165412.1|BQ165412 EST611293 KVKC Medicago truncatula c... 56 9e-006
gb|CA917624.1|CA917624 EST641771 GPOD Medicago truncatula c... 56 9e-006
gb|CA917790.1|CA917790 EST641937 GPOD Medicago truncatula c... 56 9e-006
gb|CX524182.1|CX524182 s13dNF06H02AT016_447708 Aphid-Infect... 56 9e-006
gb|DW017352.1|DW017352 EST1226313 MTY Medicago truncatula c... 56 9e-006
gb|DW017609.1|DW017609 EST1226570 MTY Medicago truncatula c... 56 9e-006
gb|AL372163.1|AL372163 MtBA49A08F1 MtBA Medicago truncatula... 52 1e-004
gb|AL372413.1|AL372413 MtBA50F11F1 MtBA Medicago truncatula... 50 6e-004
gb|BF633733.1|BF633733 NF055E01DT1F1004 Drought Medicago tr... 46 0.009
gb|BF636054.1|BF636054 NF065G07DT1F1056 Drought Medicago tr... 38 2.1
gb|BG644490.1|BG644490 EST506109 KV3 Medicago truncatula cD... 38 2.1
gb|BI264088.1|BI264088 NF111H11PL1F1096 Phosphate starved l... 38 2.1
gb|AC161405.1| Medicago truncatula chromosome 2 clone mth2-... 38 2.1
gb|AC174321.3| Medicago truncatula clone mth2-10o4, WORKING... 38 2.1
gb|CG958382.1|CG958382 MBEBS80TRB mth2 Medicago truncatula ... 36 8.4
emb|CR294929.1| mte1-11A21FM1 BAC end, cultivar Jemalong A1... 36 8.4
gb|AW560108.1|AW560108 EST315156 DSIR Medicago truncatula c... 36 8.4
gb|AW560109.1|AW560109 EST315157 DSIR Medicago truncatula c... 36 8.4
gb|BF642490.1|BF642490 NF069H11IN1F1095 Insect herbivory Me... 36 8.4
gb|BF645369.1|BF645369 NF037G02EC1F1019 Elicited cell cultu... 36 8.4
gb|AW696641.2|AW696641 NF109D01ST1F1012 Developing stem Med... 36 8.4
gb|BE317232.2|BE317232 NF056A02LF1F1005 Developing leaf Med... 36 8.4
gb|BG448243.1|BG448243 NF107E04EC1F1033 Elicited cell cultu... 36 8.4
gb|BQ149461.1|BQ149461 NF090E10FL1F1083 Developing flower M... 36 8.4
gb|CF068506.1|CF068506 EST669227 MTUS Medicago truncatula c... 36 8.4
gb|CF069715.1|CF069715 EST670436 MTUS Medicago truncatula c... 36 8.4
gb|CX525014.1|CX525014 s13dNF19E09AT071_478662 Aphid-Infect... 36 8.4
gb|CX538373.1|CX538373 s13dNF80F07GS059_459998 Germinating ... 36 8.4
gb|CX542351.1|CX542351 s13dNF82H11GS094_468018 Germinating ... 36 8.4
gb|AC128638.34| Medicago truncatula clone mth2-36h10, compl... 36 8.4
gb|AC151824.11| Medicago truncatula clone mth2-45n18, compl... 36 8.4
gb|AC157490.18| Medicago truncatula clone mth2-123f23, comp... 36 8.4
>gb|BE123932.1|BE123932 EST394057 DSIL Medicago truncatula cDNA clone pDSIL-11N21, mRNA
sequence
Length = 628
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 369 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 420
>gb|BF635808.1|BF635808 NF029F08DT1F1064 Drought Medicago truncatula cDNA clone NF029F08DT
5', mRNA sequence
Length = 485
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 384 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 435
>gb|BF644979.1|BF644979 NF019G06EC1F1051 Elicited cell culture Medicago truncatula cDNA
clone NF019G06EC 5', mRNA sequence
Length = 635
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 384 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 435
>gb|BF646508.1|BF646508 NF076A02EC1F1008 Elicited cell culture Medicago truncatula cDNA
clone NF076A02EC 5', mRNA sequence
Length = 561
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 384 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 435
>gb|BF650841.1|BF650841 NF101F08EC1F1073 Elicited cell culture Medicago truncatula cDNA
clone NF101F08EC 5', mRNA sequence
Length = 668
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 393 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 444
>gb|AW692803.2|AW692803 NF059G11ST1F1087 Developing stem Medicago truncatula cDNA clone
NF059G11ST 5', mRNA sequence
Length = 597
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 383 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 434
>gb|BG645600.1|BG645600 EST507219 KV3 Medicago truncatula cDNA clone pKV3-46D14 5' end,
mRNA sequence
Length = 833
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 358 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 409
>gb|BI262784.1|BI262784 NF094A03EC1F1021 Elicited cell culture Medicago truncatula cDNA
clone NF094A03EC 5', mRNA sequence
Length = 543
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 348 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 399
>gb|BI308959.1|BI308959 EST530369 GPOD Medicago truncatula cDNA clone pGPOD-10C6 5' end,
mRNA sequence
Length = 623
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 357 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 408
>gb|BI309629.1|BI309629 EST531039 GPOD Medicago truncatula cDNA clone pGPOD-13L21 5' end,
mRNA sequence
Length = 545
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 333 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 384
>gb|BQ136060.1|BQ136060 NF032E09EC1F1070 Elicited cell culture Medicago truncatula cDNA
clone NF032E09EC 5', mRNA sequence
Length = 658
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 378 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 429
>gb|BQ139249.1|BQ139249 NF013B06PH1F1046 Phoma-infected Medicago truncatula cDNA clone
NF013B06PH 5', mRNA sequence
Length = 666
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 383 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 434
>gb|BQ165412.1|BQ165412 EST611293 KVKC Medicago truncatula cDNA clone pKVKC-9B2, mRNA
sequence
Length = 794
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 14 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 65
>gb|CA917624.1|CA917624 EST641771 GPOD Medicago truncatula cDNA clone GPOD-36D10, mRNA
sequence
Length = 652
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 340 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 391
>gb|CA917790.1|CA917790 EST641937 GPOD Medicago truncatula cDNA clone GPOD-37C18, mRNA
sequence
Length = 747
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 359 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 410
>gb|CX524182.1|CX524182 s13dNF06H02AT016_447708 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 455
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 390 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 441
>gb|DW017352.1|DW017352 EST1226313 MTY Medicago truncatula cDNA clone MTYAS56, mRNA
sequence
Length = 859
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 414 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 465
>gb|DW017609.1|DW017609 EST1226570 MTY Medicago truncatula cDNA clone MTYAV76, mRNA
sequence
Length = 733
Score = 56.0 bits (28), Expect = 9e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 414 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacactga 465
>gb|AL372163.1|AL372163 MtBA49A08F1 MtBA Medicago truncatula cDNA clone MtBA49A08 T3, mRNA
sequence
Length = 425
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacact 505
||||||| ||||| ||||||||||||||||| ||||| || || ||||||
Sbjct: 376 ttgagcaatactgtaacaagaagatctggtcttacaatgatgtttacact 425
>gb|AL372413.1|AL372413 MtBA50F11F1 MtBA Medicago truncatula cDNA clone MtBA50F11 T3, mRNA
sequence
Length = 411
Score = 50.1 bits (25), Expect = 6e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtcatacaa 492
||||||| ||||| ||||||||||||||||| |||||
Sbjct: 373 ttgagcaatactgtaacaagaagatctggtcttacaa 409
>gb|BF633733.1|BF633733 NF055E01DT1F1004 Drought Medicago truncatula cDNA clone NF055E01DT
5', mRNA sequence
Length = 425
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 456 ttgagcagtactgcaacaagaagatctggtc 486
||||||| ||||| |||||||||||||||||
Sbjct: 383 ttgagcaatactgtaacaagaagatctggtc 413
>gb|BF636054.1|BF636054 NF065G07DT1F1056 Drought Medicago truncatula cDNA clone NF065G07DT
5', mRNA sequence
Length = 296
Score = 38.2 bits (19), Expect = 2.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcgg 1211
|||||||||||||||||||
Sbjct: 58 gaggcggaggcggcggcgg 40
Score = 36.2 bits (18), Expect = 8.4
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 64 gaggcggaggcggaggcggcgg 43
>gb|BG644490.1|BG644490 EST506109 KV3 Medicago truncatula cDNA clone pKV3-37O2 5' end, mRNA
sequence
Length = 781
Score = 38.2 bits (19), Expect = 2.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 233 gatgtggtggtgaaggtgc 251
|||||||||||||||||||
Sbjct: 1 gatgtggtggtgaaggtgc 19
>gb|BI264088.1|BI264088 NF111H11PL1F1096 Phosphate starved leaf Medicago truncatula cDNA
clone NF111H11PL 5', mRNA sequence
Length = 476
Score = 38.2 bits (19), Expect = 2.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 233 gatgtggtggtgaaggtgc 251
|||||||||||||||||||
Sbjct: 231 gatgtggtggtgaaggtgc 249
>gb|AC161405.1| Medicago truncatula chromosome 2 clone mth2-33p21, *** SEQUENCING IN
PROGRESS ***
Length = 108492
Score = 38.2 bits (19), Expect = 2.1
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatg 1217
||||||| |||||||||||||||
Sbjct: 4420 ggcggagacggcggcggcggatg 4398
>gb|AC174321.3| Medicago truncatula clone mth2-10o4, WORKING DRAFT SEQUENCE
Length = 85638
Score = 38.2 bits (19), Expect = 2.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1448 agaatgtggtgtggtgtca 1466
|||||||||||||||||||
Sbjct: 69709 agaatgtggtgtggtgtca 69691
>gb|CG958382.1|CG958382 MBEBS80TRB mth2 Medicago truncatula genomic clone 22N15, DNA sequence
Length = 962
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1197 cggaggcggcggcggcgg 1214
||||||||||||||||||
Sbjct: 149 cggaggcggcggcggcgg 166
>emb|CR294929.1| mte1-11A21FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 614
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 185 agcttcatcggcagcatc 168
>gb|AW560108.1|AW560108 EST315156 DSIR Medicago truncatula cDNA clone pDSIR-26M19, mRNA
sequence
Length = 691
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 212 agcttcatcggcagcatc 195
>gb|AW560109.1|AW560109 EST315157 DSIR Medicago truncatula cDNA clone pDSIR-26M19, mRNA
sequence
Length = 685
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 220 agcttcatcggcagcatc 203
>gb|BF642490.1|BF642490 NF069H11IN1F1095 Insect herbivory Medicago truncatula cDNA clone
NF069H11IN 5', mRNA sequence
Length = 648
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 233 agcttcatcggcagcatc 216
>gb|BF645369.1|BF645369 NF037G02EC1F1019 Elicited cell culture Medicago truncatula cDNA clone
NF037G02EC 5', mRNA sequence
Length = 635
Score = 36.2 bits (18), Expect = 8.4
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcgga 1215
|||||| |||||||||||||||
Sbjct: 67 aggcggcggcggcggcggcgga 46
>gb|AW696641.2|AW696641 NF109D01ST1F1012 Developing stem Medicago truncatula cDNA clone
NF109D01ST 5', mRNA sequence
Length = 397
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 244 agcttcatcggcagcatc 227
>gb|BE317232.2|BE317232 NF056A02LF1F1005 Developing leaf Medicago truncatula cDNA clone
NF056A02LF 5', mRNA sequence
Length = 431
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 201 agcttcatcggcagcatc 184
>gb|BG448243.1|BG448243 NF107E04EC1F1033 Elicited cell culture Medicago truncatula cDNA clone
NF107E04EC 5', mRNA sequence
Length = 682
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 232 agcttcatcggcagcatc 215
>gb|BQ149461.1|BQ149461 NF090E10FL1F1083 Developing flower Medicago truncatula cDNA clone
NF090E10FL 5', mRNA sequence
Length = 627
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 270 agcttcatcggcagcatc 253
>gb|CF068506.1|CF068506 EST669227 MTUS Medicago truncatula cDNA clone MTUS-8H1, mRNA sequence
Length = 702
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 191 agcttcatcggcagcatc 174
>gb|CF069715.1|CF069715 EST670436 MTUS Medicago truncatula cDNA clone MTUS-23E4, mRNA
sequence
Length = 775
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 68 tctccatcgcccgccacc 85
||||||||||||||||||
Sbjct: 749 tctccatcgcccgccacc 732
>gb|CX525014.1|CX525014 s13dNF19E09AT071_478662 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 275 agcttcatcggcagcatc 258
>gb|CX538373.1|CX538373 s13dNF80F07GS059_459998 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 625
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1019 agcttcatcggcagcatc 1036
||||||||||||||||||
Sbjct: 238 agcttcatcggcagcatc 221
>gb|CX542351.1|CX542351 s13dNF82H11GS094_468018 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 608
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1197 cggaggcggcggcggcgg 1214
||||||||||||||||||
Sbjct: 380 cggaggcggcggcggcgg 397
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence
Length = 110895
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1197 cggaggcggcggcggcgg 1214
||||||||||||||||||
Sbjct: 42544 cggaggcggcggcggcgg 42527
>gb|AC151824.11| Medicago truncatula clone mth2-45n18, complete sequence
Length = 99140
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1019 agcttcatcggcagcatc 1036
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Sbjct: 32710 agcttcatcggcagcatc 32727
>gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete sequence
Length = 106571
Score = 36.2 bits (18), Expect = 8.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1019 agcttcatcggcagcatc 1036
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Sbjct: 89828 agcttcatcggcagcatc 89845
Database: Mt_nucl_with_EST.fasta
Posted date: May 2, 2006 2:46 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 155,511
Number of Sequences: 392609
Number of extensions: 155511
Number of successful extensions: 11572
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11491
Number of HSP's gapped (non-prelim): 78
length of query: 1516
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1496
effective length of database: 433,880,813
effective search space: 649085696248
effective search space used: 649085696248
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)