BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCK30g08.yg.2.1
(164 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ500213.1|AJ500213 AJ500213 MTGIM Medicago truncatula c... 42 0.013
gb|AJ499392.1|AJ499392 AJ499392 MTGIM Medicago truncatula c... 42 0.013
gb|AJ499445.1|AJ499445 AJ499445 MTGIM Medicago truncatula c... 42 0.013
gb|AJ499483.1|AJ499483 AJ499483 MTGIM Medicago truncatula c... 42 0.013
gb|AJ499591.1|AJ499591 AJ499591 MTGIM Medicago truncatula c... 42 0.013
gb|AJ499868.1|AJ499868 AJ499868 MTGIM Medicago truncatula c... 42 0.013
gb|AJ499879.1|AJ499879 AJ499879 MTGIM Medicago truncatula c... 42 0.013
gb|AJ621857.1|AJ621857 AJ621857 Medicago truncatula J5 root... 42 0.013
gb|CG975624.1|CG975624 MBEGW24TR mth2 Medicago truncatula g... 40 0.052
gb|AW690371.1|AW690371 NF032G03ST1F1000 Developing stem Med... 40 0.052
gb|AW774538.1|AW774538 EST333689 KV3 Medicago truncatula cD... 40 0.052
gb|AW775957.1|AW775957 EST335022 DSIL Medicago truncatula c... 40 0.052
gb|AW776383.1|AW776383 EST335448 DSIL Medicago truncatula c... 40 0.052
gb|BF635019.1|BF635019 NF078G09DT1F1071 Drought Medicago tr... 40 0.052
gb|BF639756.1|BF639756 NF018B01IN1F1010 Insect herbivory Me... 40 0.052
gb|BF644263.1|BF644263 NF061G08EC1F1067 Elicited cell cultu... 40 0.052
gb|BF645662.1|BF645662 NF020A02EC1F1008 Elicited cell cultu... 40 0.052
gb|BG455279.1|BG455279 NF046E05PL1F1037 Phosphate starved l... 40 0.052
gb|BG644768.1|BG644768 EST506387 KV3 Medicago truncatula cD... 40 0.052
gb|BG647665.1|BG647665 EST509284 HOGA Medicago truncatula c... 40 0.052
gb|BI270061.1|BI270061 NF004F06FL1F1059 Developing flower M... 40 0.052
gb|BI270893.1|BI270893 NF005D06FL1F1058 Developing flower M... 40 0.052
gb|BI271421.1|BI271421 NF051D11FL1F1094 Developing flower M... 40 0.052
gb|BQ147578.1|BQ147578 NF044D05FL1F1045 Developing flower M... 40 0.052
gb|CB892692.1|CB892692 EST645484 HOGA Medicago truncatula c... 40 0.052
gb|CB893909.1|CB893909 EST646701 HOGA Medicago truncatula c... 40 0.052
gb|CB894137.1|CB894137 EST646929 HOGA Medicago truncatula c... 40 0.052
gb|AJ500151.1|AJ500151 AJ500151 MTGIM Medicago truncatula c... 40 0.052
gb|AJ500511.1|AJ500511 AJ500511 MTGIM Medicago truncatula c... 40 0.052
gb|AJ500531.1|AJ500531 AJ500531 MTGIM Medicago truncatula c... 40 0.052
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499283.1|AJ499283 AJ499283 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499337.1|AJ499337 AJ499337 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499360.1|AJ499360 AJ499360 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499406.1|AJ499406 AJ499406 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499950.1|AJ499950 AJ499950 MTGIM Medicago truncatula c... 40 0.052
gb|AJ499996.1|AJ499996 AJ499996 MTGIM Medicago truncatula c... 40 0.052
gb|CX529201.1|CX529201 s13dNF06C03MJ018_244460 Methyl Jasmo... 40 0.052
gb|CX529558.1|CX529558 s13dNF97F10MJ079_245167 Methyl Jasmo... 40 0.052
gb|CX533272.1|CX533272 s13dNF0ED05MJ042_319705 Methyl Jasmo... 40 0.052
gb|CX534889.1|CX534889 s13dNF0MC11MJ086_336181 Methyl Jasmo... 40 0.052
gb|CX538745.1|CX538745 s13dNF0AA04GS021_460744 Germinating ... 40 0.052
gb|CX542541.1|CX542541 s13dNF57F05GS047_474300 Germinating ... 40 0.052
gb|AJ500011.1|AJ500011 AJ500011 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500025.1|AJ500025 AJ500025 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500032.1|AJ500032 AJ500032 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500049.1|AJ500049 AJ500049 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500060.1|AJ500060 AJ500060 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500065.1|AJ500065 AJ500065 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500071.1|AJ500071 AJ500071 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500122.1|AJ500122 AJ500122 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500136.1|AJ500136 AJ500136 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500154.1|AJ500154 AJ500154 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500207.1|AJ500207 AJ500207 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500303.1|AJ500303 AJ500303 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500314.1|AJ500314 AJ500314 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500350.1|AJ500350 AJ500350 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500408.1|AJ500408 AJ500408 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500670.1|AJ500670 AJ500670 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500749.1|AJ500749 AJ500749 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500899.1|AJ500899 AJ500899 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500904.1|AJ500904 AJ500904 MTGIM Medicago truncatula c... 38 0.21
gb|AJ500926.1|AJ500926 AJ500926 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499178.1|AJ499178 AJ499178 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499182.1|AJ499182 AJ499182 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499188.1|AJ499188 AJ499188 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499235.1|AJ499235 AJ499235 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499280.1|AJ499280 AJ499280 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499286.1|AJ499286 AJ499286 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499301.1|AJ499301 AJ499301 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499321.1|AJ499321 AJ499321 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499326.1|AJ499326 AJ499326 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499342.1|AJ499342 AJ499342 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499351.1|AJ499351 AJ499351 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499358.1|AJ499358 AJ499358 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499379.1|AJ499379 AJ499379 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499391.1|AJ499391 AJ499391 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499393.1|AJ499393 AJ499393 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499402.1|AJ499402 AJ499402 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499426.1|AJ499426 AJ499426 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499429.1|AJ499429 AJ499429 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499450.1|AJ499450 AJ499450 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499456.1|AJ499456 AJ499456 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499498.1|AJ499498 AJ499498 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499519.1|AJ499519 AJ499519 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499527.1|AJ499527 AJ499527 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499553.1|AJ499553 AJ499553 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499603.1|AJ499603 AJ499603 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499606.1|AJ499606 AJ499606 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499637.1|AJ499637 AJ499637 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499640.1|AJ499640 AJ499640 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499652.1|AJ499652 AJ499652 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499664.1|AJ499664 AJ499664 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499676.1|AJ499676 AJ499676 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499695.1|AJ499695 AJ499695 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499743.1|AJ499743 AJ499743 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499748.1|AJ499748 AJ499748 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499750.1|AJ499750 AJ499750 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499765.1|AJ499765 AJ499765 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499785.1|AJ499785 AJ499785 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499808.1|AJ499808 AJ499808 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499812.1|AJ499812 AJ499812 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499824.1|AJ499824 AJ499824 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499837.1|AJ499837 AJ499837 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499840.1|AJ499840 AJ499840 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499861.1|AJ499861 AJ499861 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499898.1|AJ499898 AJ499898 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499904.1|AJ499904 AJ499904 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499907.1|AJ499907 AJ499907 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499910.1|AJ499910 AJ499910 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499920.1|AJ499920 AJ499920 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499927.1|AJ499927 AJ499927 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499947.1|AJ499947 AJ499947 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499959.1|AJ499959 AJ499959 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499960.1|AJ499960 AJ499960 MTGIM Medicago truncatula c... 38 0.21
gb|AJ499983.1|AJ499983 AJ499983 MTGIM Medicago truncatula c... 38 0.21
>gb|AJ500213.1|AJ500213 AJ500213 MTGIM Medicago truncatula cDNA clone mtgmacc120013h12,
mRNA sequence
Length = 426
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 25 aggtacctgcccggcggccgctcga 1
>gb|AJ499392.1|AJ499392 AJ499392 MTGIM Medicago truncatula cDNA clone mtgmacc120003f05,
mRNA sequence
Length = 496
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 25 aggtacctgcccggcggccgctcga 1
>gb|AJ499445.1|AJ499445 AJ499445 MTGIM Medicago truncatula cDNA clone mtgmacc120004d02,
mRNA sequence
Length = 571
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 203 aggtacctgcccggcggccgctcga 179
>gb|AJ499483.1|AJ499483 AJ499483 MTGIM Medicago truncatula cDNA clone mtgmacc120004g07,
mRNA sequence
Length = 84
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 25 aggtacctgcccggcggccgctcga 1
>gb|AJ499591.1|AJ499591 AJ499591 MTGIM Medicago truncatula cDNA clone mtgmacc120006a10,
mRNA sequence
Length = 310
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 25 aggtacctgcccggcggccgctcga 1
>gb|AJ499868.1|AJ499868 AJ499868 MTGIM Medicago truncatula cDNA clone mtgmacc120009e06,
mRNA sequence
Length = 363
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 25 aggtacctgcccggcggccgctcga 1
>gb|AJ499879.1|AJ499879 AJ499879 MTGIM Medicago truncatula cDNA clone mtgmacc120009f05,
mRNA sequence
Length = 489
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 139 aggtacctgccgggcggccgctcga 163
||||||||||| |||||||||||||
Sbjct: 25 aggtacctgcccggcggccgctcga 1
>gb|AJ621857.1|AJ621857 AJ621857 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs376, mRNA sequence
Length = 591
Score = 42.1 bits (21), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 140 ggtacctgccgggcggccgctcgaa 164
|||||||||| ||||||||||||||
Sbjct: 546 ggtacctgcccggcggccgctcgaa 570
>gb|CG975624.1|CG975624 MBEGW24TR mth2 Medicago truncatula genomic clone 53D23, DNA
sequence
Length = 762
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 599 gaatggaagatcattttact 580
>gb|AW690371.1|AW690371 NF032G03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF032G03ST 5', mRNA sequence
Length = 614
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 376 gaatggaagatcattttact 395
>gb|AW774538.1|AW774538 EST333689 KV3 Medicago truncatula cDNA clone pKV3-22L16, mRNA
sequence
Length = 651
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 528 gaatggaagatcattttact 547
>gb|AW775957.1|AW775957 EST335022 DSIL Medicago truncatula cDNA clone pDSIL-3J7, mRNA
sequence
Length = 690
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 373 gaatggaagatcattttact 392
>gb|AW776383.1|AW776383 EST335448 DSIL Medicago truncatula cDNA clone pDSIL-7B12, mRNA
sequence
Length = 583
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 292 gaatggaagatcattttact 311
>gb|BF635019.1|BF635019 NF078G09DT1F1071 Drought Medicago truncatula cDNA clone NF078G09DT
5', mRNA sequence
Length = 694
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 420 gaatggaagatcattttact 439
>gb|BF639756.1|BF639756 NF018B01IN1F1010 Insect herbivory Medicago truncatula cDNA clone
NF018B01IN 5', mRNA sequence
Length = 282
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 220 gaatggaagatcattttact 239
>gb|BF644263.1|BF644263 NF061G08EC1F1067 Elicited cell culture Medicago truncatula cDNA
clone NF061G08EC 5', mRNA sequence
Length = 620
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 448 gaatggaagatcattttact 467
>gb|BF645662.1|BF645662 NF020A02EC1F1008 Elicited cell culture Medicago truncatula cDNA
clone NF020A02EC 5', mRNA sequence
Length = 672
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 551 gaatggaagatcattttact 570
>gb|BG455279.1|BG455279 NF046E05PL1F1037 Phosphate starved leaf Medicago truncatula cDNA
clone NF046E05PL 5', mRNA sequence
Length = 685
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 383 gaatggaagatcattttact 402
>gb|BG644768.1|BG644768 EST506387 KV3 Medicago truncatula cDNA clone pKV3-38C18 5' end,
mRNA sequence
Length = 718
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 505 gaatggaagatcattttact 524
>gb|BG647665.1|BG647665 EST509284 HOGA Medicago truncatula cDNA clone pHOGA-17F13 5' end,
mRNA sequence
Length = 718
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 529 gaatggaagatcattttact 548
>gb|BI270061.1|BI270061 NF004F06FL1F1059 Developing flower Medicago truncatula cDNA clone
NF004F06FL 5', mRNA sequence
Length = 626
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 274 gaatggaagatcattttact 293
>gb|BI270893.1|BI270893 NF005D06FL1F1058 Developing flower Medicago truncatula cDNA clone
NF005D06FL 5', mRNA sequence
Length = 566
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 268 gaatggaagatcattttact 287
>gb|BI271421.1|BI271421 NF051D11FL1F1094 Developing flower Medicago truncatula cDNA clone
NF051D11FL 5', mRNA sequence
Length = 648
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 419 gaatggaagatcattttact 438
>gb|BQ147578.1|BQ147578 NF044D05FL1F1045 Developing flower Medicago truncatula cDNA clone
NF044D05FL 5', mRNA sequence
Length = 489
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 439 gaatggaagatcattttact 458
>gb|CB892692.1|CB892692 EST645484 HOGA Medicago truncatula cDNA clone HOGA-19B13, mRNA
sequence
Length = 798
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 583 gaatggaagatcattttact 602
>gb|CB893909.1|CB893909 EST646701 HOGA Medicago truncatula cDNA clone HOGA-29M8, mRNA
sequence
Length = 384
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 138 gaatggaagatcattttact 157
>gb|CB894137.1|CB894137 EST646929 HOGA Medicago truncatula cDNA clone HOGA-30O3, mRNA
sequence
Length = 579
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 279 gaatggaagatcattttact 298
>gb|AJ500151.1|AJ500151 AJ500151 MTGIM Medicago truncatula cDNA clone mtgmacc120013c09,
mRNA sequence
Length = 421
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ500511.1|AJ500511 AJ500511 MTGIM Medicago truncatula cDNA clone mtgmacc120017b12,
mRNA sequence
Length = 348
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ500531.1|AJ500531 AJ500531 MTGIM Medicago truncatula cDNA clone mtgmacc120017d09,
mRNA sequence
Length = 627
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcgaa 164
||||||||| ||||||||||||||
Sbjct: 63 gtacctgcccggcggccgctcgaa 40
>gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula cDNA clone mtgmacc120017g10,
mRNA sequence
Length = 406
Score = 40.1 bits (20), Expect = 0.052
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 138 taggtacctgcc-gggcggccgctcgaa 164
|||||||||||| |||||||||||||||
Sbjct: 287 taggtacctgcccgggcggccgctcgaa 314
>gb|AJ499283.1|AJ499283 AJ499283 MTGIM Medicago truncatula cDNA clone mtgmacc120002c04,
mRNA sequence
Length = 464
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ499337.1|AJ499337 AJ499337 MTGIM Medicago truncatula cDNA clone mtgmacc120002h02,
mRNA sequence
Length = 429
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcgaa 164
||||||||| ||||||||||||||
Sbjct: 29 gtacctgcccggcggccgctcgaa 6
>gb|AJ499360.1|AJ499360 AJ499360 MTGIM Medicago truncatula cDNA clone mtgmacc120003b06,
mRNA sequence
Length = 420
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ499406.1|AJ499406 AJ499406 MTGIM Medicago truncatula cDNA clone mtgmacc120003g10,
mRNA sequence
Length = 94
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula cDNA clone mtgmacc120008b12,
mRNA sequence
Length = 350
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ499950.1|AJ499950 AJ499950 MTGIM Medicago truncatula cDNA clone mtgmacc120010f03,
mRNA sequence
Length = 303
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 140 ggtacctgccgggcggccgctcga 163
|||||||||| |||||||||||||
Sbjct: 24 ggtacctgcccggcggccgctcga 1
>gb|AJ499996.1|AJ499996 AJ499996 MTGIM Medicago truncatula cDNA clone mtgmacc120011c04,
mRNA sequence
Length = 624
Score = 40.1 bits (20), Expect = 0.052
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcgaa 164
||||||||| ||||||||||||||
Sbjct: 39 gtacctgcccggcggccgctcgaa 16
>gb|CX529201.1|CX529201 s13dNF06C03MJ018_244460 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 645
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 352 gaatggaagatcattttact 371
>gb|CX529558.1|CX529558 s13dNF97F10MJ079_245167 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 606
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 397 gaatggaagatcattttact 416
>gb|CX533272.1|CX533272 s13dNF0ED05MJ042_319705 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 637
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 608 gaatggaagatcattttact 627
>gb|CX534889.1|CX534889 s13dNF0MC11MJ086_336181 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 550
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 452 gaatggaagatcattttact 471
>gb|CX538745.1|CX538745 s13dNF0AA04GS021_460744 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 449
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 416 gaatggaagatcattttact 435
>gb|CX542541.1|CX542541 s13dNF57F05GS047_474300 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 507
Score = 40.1 bits (20), Expect = 0.052
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 gaatggaagatcattttact 137
||||||||||||||||||||
Sbjct: 272 gaatggaagatcattttact 291
>gb|AJ500011.1|AJ500011 AJ500011 MTGIM Medicago truncatula cDNA clone mtgmacc120011d10,
mRNA sequence
Length = 443
Score = 38.2 bits (19), Expect = 0.21
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcga 163
||||||||| |||||||||||||
Sbjct: 23 gtacctgcccggcggccgctcga 1
>gb|AJ500025.1|AJ500025 AJ500025 MTGIM Medicago truncatula cDNA clone mtgmacc120011f01,
mRNA sequence
Length = 508
Score = 38.2 bits (19), Expect = 0.21
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcga 163
||||||||| |||||||||||||
Sbjct: 23 gtacctgcccggcggccgctcga 1
>gb|AJ500032.1|AJ500032 AJ500032 MTGIM Medicago truncatula cDNA clone mtgmacc120011f11,
mRNA sequence
Length = 450
Score = 38.2 bits (19), Expect = 0.21
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcga 163
||||||||| |||||||||||||
Sbjct: 23 gtacctgcccggcggccgctcga 1
>gb|AJ500049.1|AJ500049 AJ500049 MTGIM Medicago truncatula cDNA clone mtgmacc120012a02,
mRNA sequence
Length = 366
Score = 38.2 bits (19), Expect = 0.21
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcga 163
||||||||| |||||||||||||
Sbjct: 23 gtacctgcccggcggccgctcga 1
>gb|AJ500060.1|AJ500060 AJ500060 MTGIM Medicago truncatula cDNA clone mtgmacc120012b04,
mRNA sequence
Length = 366
Score = 38.2 bits (19), Expect = 0.21
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcga 163
||||||||| |||||||||||||
Sbjct: 23 gtacctgcccggcggccgctcga 1
>gb|AJ500065.1|AJ500065 AJ500065 MTGIM Medicago truncatula cDNA clone mtgmacc120012b10,
mRNA sequence
Length = 137
Score = 38.2 bits (19), Expect = 0.21
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 141 gtacctgccgggcggccgctcga 163
||||||||| |||||||||||||
Sbjct: 23 gtacctgcccggcggccgctcga 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 52,510
Number of Sequences: 392609
Number of extensions: 52510
Number of successful extensions: 12434
Number of sequences better than 0.5: 117
Number of HSP's better than 0.5 without gapping: 116
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12317
Number of HSP's gapped (non-prelim): 117
length of query: 164
length of database: 441,732,993
effective HSP length: 18
effective length of query: 146
effective length of database: 434,666,031
effective search space: 63461240526
effective search space used: 63461240526
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)