BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCF4h05.yg.2.1
(697 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula c... 153 2e-035
gb|CG975081.1|CG975081 MBEFW73TF mth2 Medicago truncatula g... 78 1e-012
gb|AW559770.1|AW559770 EST314818 DSIR Medicago truncatula c... 76 4e-012
gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula c... 76 4e-012
gb|AC137603.16| Medicago truncatula clone mth2-14b10, compl... 76 4e-012
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 76 4e-012
gb|AC158209.13| Medicago truncatula clone mth2-154h5, compl... 74 2e-011
gb|BF632590.1|BF632590 NF032G03DT1F1021 Drought Medicago tr... 68 1e-009
emb|CR350839.1| mte1-86C17FM1 BAC end, cultivar Jemalong A1... 50 3e-004
emb|CR351348.1| mte1-86D18FM1 BAC end, cultivar Jemalong A1... 50 3e-004
gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORK... 50 3e-004
gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKI... 50 3e-004
gb|AW696467.2|AW696467 NF106E12ST1F1098 Developing stem Med... 44 0.016
gb|AJ500423.1|AJ500423 AJ500423 MTGIM Medicago truncatula c... 44 0.016
gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone m... 44 0.016
gb|AC122723.6| Medicago truncatula clone mth2-5i15, complet... 44 0.016
emb|CR510333.1| mth4-22E5FM1 BAC end, cultivar Jemalong A17... 42 0.062
gb|BI271181.1|BI271181 NF051G10FL1F1084 Developing flower M... 42 0.062
gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula c... 42 0.062
gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula c... 42 0.062
gb|CB893638.1|CB893638 EST646430 HOGA Medicago truncatula c... 40 0.24
gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula c... 40 0.24
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 40 0.24
gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 ... 40 0.24
>gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula cDNA clone MTYA123, mRNA
sequence
Length = 634
Score = 153 bits (77), Expect = 2e-035
Identities = 329/413 (79%)
Strand = Plus / Minus
Query: 19 ggtacagaagtagaatccaacagttgtcacgtagaaggataacatcctgaaaaagtcaaa 78
|||||| |||||| ||||||| ||||| | ||| || || | ||||| ||| || |||||
Sbjct: 431 ggtacaaaagtagtatccaactgttgtgaagtaaaaagacatcatccggaagaaatcaaa 372
Query: 79 aagttgtccgagtctatatatgtctcggctaagaacttgttcaccatttccaccagcaac 138
|||||| || |||| ||||| || || || || ||||||||||| || |||| | |||
Sbjct: 371 aagttgcccaagtcggtatatatcccgactcaggacttgttcaccgttaccacttgaaac 312
Query: 139 ttttccttcaaatagtgcaatctgattaagtccaacatccctacctttgccaacctgaat 198
||| || || ||||||||||||||||| || || |||||||| || || |||||||||||
Sbjct: 311 tttcccctcgaatagtgcaatctgattgaggcccacatcccttcccttaccaacctgaat 252
Query: 199 atattcatgatgagttatgcatccttgacgcagagttgagttgaatcctgcatatatatc 258
||||||||||||||| ||| |||||||| || ||||| |||||||||| || |||||
Sbjct: 251 atattcatgatgagtaatgtttccttgacacaaggttgaattgaatcctgagtagatatc 192
Query: 259 ctcactgatattgatgctgcgagaggccttactaattccaccccttgttatatgaaaaat 318
|| || |||||||| || || ||||| || || ||||| | ||||| || || |
Sbjct: 191 ttcgctaatattgataacacgggaagccttgctgataccaccgcgggttatgtggaagac 132
Query: 319 tctatcaaaaacatctggatgaccatagtgcattctcactttcagcgggttagcaagaac 378
||||||||||||||| ||||||||||| ||||| | ||||||| || || || | |||
Sbjct: 131 tctatcaaaaacatcaggatgaccataatgcatacgaactttcaaaggatttgctaaaac 72
Query: 379 acgctgtcctaatgtcacaaaacttgtctcctgattagacataaatgaggcca 431
||||| || || |||||||||||||| || ||||| ||||| ||||| ||||
Sbjct: 71 ccgctgacccaaagtcacaaaacttgtttcttgattggacatgaatgaagcca 19
>gb|CG975081.1|CG975081 MBEFW73TF mth2 Medicago truncatula genomic clone 47N1, DNA sequence
Length = 791
Score = 77.8 bits (39), Expect = 1e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 278 cgagaggccttactaattccaccccttgttatatgaaaaattctatcaaaaacatctgga 337
||||| |||||||||||||| || | || || || ||||||||||||||||||||||||
Sbjct: 709 cgagaagccttactaattcctccacgggtaatgtggaaaattctatcaaaaacatctgga 650
Query: 338 tgaccatagtg 348
|||||||||||
Sbjct: 649 tgaccatagtg 639
>gb|AW559770.1|AW559770 EST314818 DSIR Medicago truncatula cDNA clone pDSIR-24N15, mRNA
sequence
Length = 653
Score = 75.8 bits (38), Expect = 4e-012
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 106 gctaagaacttgttcaccatttccaccagcaacttttccttcaaatagtgcaatctgatt 165
|||||| ||||| || ||||| ||||| || ||||| |||||||| || |||||||| ||
Sbjct: 262 gctaagcacttgctctccattaccacctgctactttcccttcaaagagggcaatctggtt 203
Query: 166 aagtccaacatccctacctttgccaacctgaatatattcatg 207
| ||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 202 taaaccaacatcccttccttttccaacctgaatgtattcatg 161
>gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula cDNA clone MTUS-8C4, mRNA
sequence
Length = 714
Score = 75.8 bits (38), Expect = 4e-012
Identities = 194/246 (78%)
Strand = Plus / Minus
Query: 106 gctaagaacttgttcaccatttccaccagcaacttttccttcaaatagtgcaatctgatt 165
|||||| ||||| || ||||| ||||| || ||||| |||||||| || |||||||| ||
Sbjct: 286 gctaagcacttgctctccattaccacctgctactttcccttcaaagagggcaatctggtt 227
Query: 166 aagtccaacatccctacctttgccaacctgaatatattcatgatgagttatgcatccttg 225
| ||||||||||| ||||| ||||||||||| |||||||| || || | ||| |
Sbjct: 226 taaaccaacatcccttccttttccaacctgaatgtattcatggtgtgtgacatttccaag 167
Query: 226 acgcagagttgagttgaatcctgcatatatatcctcactgatattgatgctgcgagaggc 285
|||| || |||||||| || ||||||||||| ||||| ||||| || || || ||
Sbjct: 166 ccgcaacgtagagttgaagccagcatatatatcttcactaatattaataacacgtgaagc 107
Query: 286 cttactaattccaccccttgttatatgaaaaattctatcaaaaacatctggatgaccata 345
|||||||| || || | ||||| ||||| ||||| ||||| |||||||| || |||||
Sbjct: 106 tttactaatccctccacgagttatgtgaaatattctgtcaaatacatctgggtgcccata 47
Query: 346 gtgcat 351
||||||
Sbjct: 46 gtgcat 41
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
Length = 109793
Score = 75.8 bits (38), Expect = 4e-012
Identities = 146/182 (80%)
Strand = Plus / Plus
Query: 19 ggtacagaagtagaatccaacagttgtcacgtagaaggataacatcctgaaaaagtcaaa 78
|||||| |||||| ||||||| ||||| | ||| || || | ||||| ||| || |||||
Sbjct: 4585 ggtacaaaagtagtatccaactgttgtgaagtaaaaagacatcatccggaagaaatcaaa 4644
Query: 79 aagttgtccgagtctatatatgtctcggctaagaacttgttcaccatttccaccagcaac 138
|||||| || |||| ||||| || || || || ||||||||||| || |||| | |||
Sbjct: 4645 aagttgcccaagtcggtatatatcccgactcaggacttgttcaccgttaccacttgaaac 4704
Query: 139 ttttccttcaaatagtgcaatctgattaagtccaacatccctacctttgccaacctgaat 198
||| || || ||||||||||||||||| || || |||||||| || || |||||||| ||
Sbjct: 4705 tttcccctcgaatagtgcaatctgattgaggcccacatcccttcccttaccaacctgtat 4764
Query: 199 at 200
||
Sbjct: 4765 at 4766
Score = 67.9 bits (34), Expect = 1e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 191 acctgaatatattcatgatgagttatgcatccttgacgcagagttgagttgaatcctg 248
||||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 4819 acctgaatatattcatgatgagtaatgtttccttgacgcaaggttgaattgaatcctg 4876
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 319 tctatcaaaaacatctggatgaccatagtgcat 351
||||||||||||||| ||||||||||| |||||
Sbjct: 5471 tctatcaaaaacatcaggatgaccataatgcat 5503
Score = 40.1 bits (20), Expect = 0.24
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 392 gtcacaaaacttgtctcctgattagacataaatgaggcca 431
|||||||||||||| || ||||| ||||| ||||| ||||
Sbjct: 5630 gtcacaaaacttgtttcttgattggacatgaatgaagcca 5669
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 75.8 bits (38), Expect = 4e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 19 ggtacagaagtagaatccaacagttgtcacgtagaaggataacatcctgaaaaagtcaaa 78
|||||| |||||| ||||||| ||||| | ||| || || | ||||| ||| || |||||
Sbjct: 5695 ggtacaaaagtagtatccaactgttgtgaagtaaaaagacatcatccggaagaaatcaaa 5636
Query: 79 aagttgtccgagtctatatatgtctcggctaagaacttgttcaccatttccaccagcaac 138
|||||| || |||| ||||| || || || || ||||||||||| || |||| | |||
Sbjct: 5635 aagttgcccaagtcggtatatatcccgactcaggacttgttcaccgttaccacttgaaac 5576
Query: 139 ttttccttcaaatagtgcaatctgattaagtccaacatccctacctttgccaacctgaat 198
||| || || ||||||||||||||||| || || |||||||| || || |||||||| ||
Sbjct: 5575 tttcccctcgaatagtgcaatctgattgaggcccacatcccttcccttaccaacctgtat 5516
Query: 199 at 200
||
Sbjct: 5515 at 5514
Score = 67.9 bits (34), Expect = 1e-009
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 191 acctgaatatattcatgatgagttatgcatccttgacgcagagttgagttgaatcctg 248
||||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 5461 acctgaatatattcatgatgagtaatgtttccttgacgcaaggttgaattgaatcctg 5404
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 319 tctatcaaaaacatctggatgaccatagtgcat 351
||||||||||||||| ||||||||||| |||||
Sbjct: 4809 tctatcaaaaacatcaggatgaccataatgcat 4777
Score = 40.1 bits (20), Expect = 0.24
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 392 gtcacaaaacttgtctcctgattagacataaatgaggcca 431
|||||||||||||| || ||||| ||||| ||||| ||||
Sbjct: 4650 gtcacaaaacttgtttcttgattggacatgaatgaagcca 4611
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
Length = 93864
Score = 73.8 bits (37), Expect = 2e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 252 atatatcctcactgatattgatgctgcgagaggccttactaattccaccccttgttatat 311
|||||||||| || | |||||||| ||||| ||||| || ||||| || | |||| ||
Sbjct: 56990 atatatcctcgctcagattgatgccacgagaagccttgctgattcctccgcgggttacat 57049
Query: 312 gaaaaattctatcaaaaacatctggatgaccatagtg 348
| |||||||||||||||||||| ||||||||||||||
Sbjct: 57050 ggaaaattctatcaaaaacatccggatgaccatagtg 57086
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 173 acatccctacctttgccaacctgaatatattcatgatgagt 213
||||||||||| || ||||| || |||||||||||||||||
Sbjct: 56834 acatccctaccctttccaacttggatatattcatgatgagt 56874
>gb|BF632590.1|BF632590 NF032G03DT1F1021 Drought Medicago truncatula cDNA clone NF032G03DT
5', mRNA sequence
Length = 452
Score = 67.9 bits (34), Expect = 1e-009
Identities = 130/162 (80%)
Strand = Plus / Minus
Query: 19 ggtacagaagtagaatccaacagttgtcacgtagaaggataacatcctgaaaaagtcaaa 78
|||||| |||||| ||||||| ||||| | ||| || || | ||||| ||| || |||||
Sbjct: 164 ggtacaaaagtagtatccaactgttgtgaagtaaaaagacatcatccggaagaaatcaaa 105
Query: 79 aagttgtccgagtctatatatgtctcggctaagaacttgttcaccatttccaccagcaac 138
|||||| || |||| ||||| || || || || ||||||||||| || |||| | |||
Sbjct: 104 aagttgcccaagtcggtatatatcccgactcaggacttgttcaccgttaccacttgaaac 45
Query: 139 ttttccttcaaatagtgcaatctgattaagtccaacatccct 180
||| || || ||||||||||||||||| || || ||||||||
Sbjct: 44 tttcccctcgaatagtgcaatctgattgaggcccacatccct 3
>emb|CR350839.1| mte1-86C17FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 765
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 323 tcaaaaacatctggatgaccatagtgcattctcactttcagcgggttagcaagaacacgc 382
||||| ||||||||||||||||| ||||||| ||||||| || || || | ||| | |
Sbjct: 514 tcaaacacatctggatgaccataatgcattcgaactttcaaaggatttgccaaaaccctc 573
Query: 383 tgtcctaatgtcacaaaacttgtctcctg 411
||||||| || || ||||||||||||||
Sbjct: 574 tgtcctagggtgacgaaacttgtctcctg 602
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 161 tgattaagtccaacatccctacctttgccaacctgaatatattcatgatgagt 213
||||| || ||||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 352 tgattcagaccaacatcccttccctttccaacctgaatgtattcatggtgagt 404
>emb|CR351348.1| mte1-86D18FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 654
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 323 tcaaaaacatctggatgaccatagtgcattctcactttcagcgggttagcaagaacacgc 382
||||| ||||||||||||||||| ||||||| ||||||| || || || | ||| | |
Sbjct: 499 tcaaacacatctggatgaccataatgcattcgaactttcaaaggatttgccaaaaccctc 558
Query: 383 tgtcctaatgtcacaaaacttgtctcctg 411
||||||| || || ||||||||||||||
Sbjct: 559 tgtcctagggtgacgaaacttgtctcctg 587
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 161 tgattaagtccaacatccctacctttgccaacctgaatatattcatgatgagt 213
||||| || ||||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 337 tgattcagaccaacatcccttccctttccaacctgaatgtattcatggtgagt 389
>gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORKING DRAFT SEQUENCE, 3
unordered pieces
Length = 118726
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 161 tgattaagtccaacatccctacctttgccaacctgaatatattcatgatgagt 213
||||| || ||||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 20875 tgattcagaccaacatcccttccctttccaacctgaatgtattcatggtgagt 20823
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 323 tcaaaaacatctggatgaccatagtgcattctcactttcagcgggttagcaagaacacgc 382
||||| ||||||||||||||||| ||||||| ||||||| || || || | ||| | |
Sbjct: 20713 tcaaacacatctggatgaccataatgcattcgaactttcaaaggatttgccaaaaccctc 20654
Query: 383 tgtcctaatgtcacaaaacttgtctcctg 411
||||||| || || ||||||||||||||
Sbjct: 20653 tgtcctagggtgacgaaacttgtctcctg 20625
>gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKING DRAFT SEQUENCE
Length = 118519
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 323 tcaaaaacatctggatgaccatagtgcattctcactttcagcgggttagcaagaacacgc 382
||||| ||||||||||||||||| ||||||| ||||||| || || || | ||| | |
Sbjct: 12084 tcaaacacatctggatgaccataatgcattcgaactttcaaaggatttgccaaaaccctc 12143
Query: 383 tgtcctaatgtcacaaaacttgtctcctg 411
||||||| || || ||||||||||||||
Sbjct: 12144 tgtcctagggtgacgaaacttgtctcctg 12172
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 161 tgattaagtccaacatccctacctttgccaacctgaatatattcatgatgagt 213
||||| || ||||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 11922 tgattcagaccaacatcccttccctttccaacctgaatgtattcatggtgagt 11974
>gb|AW696467.2|AW696467 NF106E12ST1F1098 Developing stem Medicago truncatula cDNA clone
NF106E12ST 5', mRNA sequence
Length = 511
Score = 44.1 bits (22), Expect = 0.016
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 382 ctgtcctaatgtcacaaaacttgtctcctgattagacataaa 423
|||||| | |||||||||||| || |||||||| ||||||||
Sbjct: 468 ctgtccaattgtcacaaaactggtttcctgattggacataaa 427
>gb|AJ500423.1|AJ500423 AJ500423 MTGIM Medicago truncatula cDNA clone mtgmacc120016c03,
mRNA sequence
Length = 581
Score = 44.1 bits (22), Expect = 0.016
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 382 ctgtcctaatgtcacaaaacttgtctcctgattagacataaa 423
|||||| | |||||||||||| || |||||||| ||||||||
Sbjct: 185 ctgtccaattgtcacaaaactggtttcctgattggacataaa 226
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete
sequence
Length = 103090
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 391 tgtcacaaaacttgtctcctgattagacataaatgaggccagggaggaaacact 444
|||||| ||||||||||| ||||| |||||||| | || ||||| ||||||||
Sbjct: 7091 tgtcacgaaacttgtctcttgatttgacataaaccatgcaagggaagaaacact 7038
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
Length = 105353
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 391 tgtcacaaaacttgtctcctgattagacataaatgaggccagggaggaaacact 444
|||||| ||||||||||| ||||| |||||||| | || ||||| ||||||||
Sbjct: 78488 tgtcacgaaacttgtctcttgatttgacataaaccatgcaagggaagaaacact 78435
>emb|CR510333.1| mth4-22E5FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 376
Score = 42.1 bits (21), Expect = 0.062
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 taacatcctgaaaaagtcaaa 78
|||||||||||||||||||||
Sbjct: 18 taacatcctgaaaaagtcaaa 38
>gb|BI271181.1|BI271181 NF051G10FL1F1084 Developing flower Medicago truncatula cDNA clone
NF051G10FL 5', mRNA sequence
Length = 520
Score = 42.1 bits (21), Expect = 0.062
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 170 ccaacatccctacctttgccaacctgaatatattcatgatg 210
|||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 122 ccaacatctcttcctttacctacctgtatatattcatgatg 82
>gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula cDNA clone mtgmacc120016e11,
mRNA sequence
Length = 323
Score = 42.1 bits (21), Expect = 0.062
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 tagcgtggtcgcggtcgaggtacag 25
|||||||||||||| ||||||||||
Sbjct: 323 tagcgtggtcgcggccgaggtacag 299
>gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula cDNA clone mtgmacc120017a03,
mRNA sequence
Length = 291
Score = 42.1 bits (21), Expect = 0.062
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 tagcgtggtcgcggtcgaggtacag 25
|||||||||||||| ||||||||||
Sbjct: 291 tagcgtggtcgcggccgaggtacag 267
>gb|CB893638.1|CB893638 EST646430 HOGA Medicago truncatula cDNA clone HOGA-28F5, mRNA
sequence
Length = 841
Score = 40.1 bits (20), Expect = 0.24
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 392 gtcacaaaacttgtctcctgattagacataaatgaggccagggaggaaacacttcc 447
|||||||| || |||||||| || |||||||| | || ||||| |||||||||||
Sbjct: 772 gtcacaaagctggtctcctggtttgacataaaccaagcaagggatgaaacacttcc 717
>gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula cDNA clone mtgmacc120008a04,
mRNA sequence
Length = 337
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 tagcgtggtcgcggtcgaggtaca 24
|||||||||||||| |||||||||
Sbjct: 337 tagcgtggtcgcggccgaggtaca 314
>gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs361, mRNA sequence
Length = 593
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 tagcgtggtcgcggtcgaggtaca 24
|||||||||||||| |||||||||
Sbjct: 526 tagcgtggtcgcggccgaggtaca 503
>gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs224, mRNA sequence
Length = 673
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 tagcgtggtcgcggtcgaggtaca 24
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Sbjct: 653 tagcgtggtcgcggccgaggtaca 630
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 172,204
Number of Sequences: 392609
Number of extensions: 172204
Number of successful extensions: 12976
Number of sequences better than 0.5: 24
Number of HSP's better than 0.5 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12886
Number of HSP's gapped (non-prelim): 84
length of query: 697
length of database: 441,732,993
effective HSP length: 19
effective length of query: 678
effective length of database: 434,273,422
effective search space: 294437380116
effective search space used: 294437380116
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)