BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS9a01.xg.2.1
(480 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW690117.1|AW690117 NF028E10ST1F1000 Developing stem Med... 82 5e-014
gb|AW694738.1|AW694738 NF079D10ST1F1089 Developing stem Med... 82 5e-014
gb|AW691296.1|AW691296 NF040A12ST1F1000 Developing stem Med... 70 2e-010
gb|BQ148302.1|BQ148302 NF065H07FL1F1064 Developing flower M... 70 2e-010
gb|AC137831.26| Medicago truncatula clone mth2-34o21, compl... 68 7e-010
gb|AC139745.29| Medicago truncatula clone mth2-17d15, WORKI... 68 7e-010
gb|BI311325.1|BI311325 EST5313075 GESD Medicago truncatula ... 64 1e-008
gb|BM779044.1|BM779044 EST589619 KV2 Medicago truncatula cD... 64 1e-008
gb|BI311933.1|BI311933 EST5313683 GESD Medicago truncatula ... 60 2e-007
gb|AC148406.12| Medicago truncatula clone mth2-46e9, comple... 60 2e-007
emb|CR310935.1| mte1-32B18FM1 BAC end, cultivar Jemalong A1... 40 0.17
gb|BI311137.1|BI311137 EST5312887 GESD Medicago truncatula ... 40 0.17
gb|BQ147051.1|BQ147051 NF032A12FL1F1097 Developing flower M... 40 0.17
gb|AC129092.13| Medicago truncatula clone mth2-17n16, compl... 40 0.17
emb|CR333542.1| mte1-63J3RM1 BAC end, cultivar Jemalong A17... 38 0.65
emb|CR296188.1| mte1-12F6RM1 BAC end, cultivar Jemalong A17... 38 0.65
gb|CA918696.1|CA918696 EST636414 MTUS Medicago truncatula c... 38 0.65
gb|AC147877.10| Medicago truncatula clone mth2-9b13, comple... 38 0.65
gb|AC126792.15| Medicago truncatula clone mth2-8o8, complet... 38 0.65
gb|AC165430.2| Medicago truncatula chromosome 2 clone mth2-... 38 0.65
gb|AC150703.31| Medicago truncatula clone mth2-130k11, WORK... 38 0.65
gb|AW559860.1|AW559860 EST314908 DSIR Medicago truncatula c... 36 2.6
gb|AW773587.1|AW773587 EST332573 KV3 Medicago truncatula cD... 36 2.6
gb|BE124666.1|BE124666 EST393701 GVN Medicago truncatula cD... 36 2.6
gb|BE204268.1|BE204268 EST396944 KV0 Medicago truncatula cD... 36 2.6
gb|BF636153.1|BF636153 NF076B03DT1F1028 Drought Medicago tr... 36 2.6
gb|AW697290.2|AW697290 NF117C03ST1F1020 Developing stem Med... 36 2.6
gb|BE248284.2|BE248284 NF009B02DT1F1014 Drought Medicago tr... 36 2.6
gb|BG451955.1|BG451955 NF043C09DT1F1067 Drought Medicago tr... 36 2.6
gb|BG452297.1|BG452297 NF085E06LF1F1051 Developing leaf Med... 36 2.6
gb|BG452758.1|BG452758 NF080A04LF1F1022 Developing leaf Med... 36 2.6
gb|BG452989.1|BG452989 NF087G07LF1F1053 Developing leaf Med... 36 2.6
gb|BG453355.1|BG453355 NF090C05LF1F1035 Developing leaf Med... 36 2.6
gb|BQ255246.1|BQ255246 MTNAH39TKM KVKC Medicago truncatula ... 36 2.6
gb|CB891080.1|CB891080 EST648049 KV3 Medicago truncatula cD... 36 2.6
gb|CA920846.1|CA920846 EST638564 MTUS Medicago truncatula c... 36 2.6
gb|AJ845798.1|AJ845798 AJ845798 MtSNF Medicago truncatula c... 36 2.6
gb|CX525863.1|CX525863 s13dNF31G02AT020_509470 Aphid-Infect... 36 2.6
gb|CX526449.1|CX526449 s13dNF46A02AT017_510642 Aphid-Infect... 36 2.6
gb|DW016995.1|DW016995 EST1225956 MTY Medicago truncatula c... 36 2.6
gb|AC139707.10| Medicago truncatula clone mth2-16b22, compl... 36 2.6
gb|AC144389.22| Medicago truncatula clone mth2-25e14, compl... 36 2.6
gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone m... 36 2.6
gb|AC149492.14| Medicago truncatula clone mth2-99d10, compl... 36 2.6
gb|AC174313.3| Medicago truncatula clone mth2-157i20, WORKI... 36 2.6
>gb|AW690117.1|AW690117 NF028E10ST1F1000 Developing stem Medicago truncatula cDNA clone
NF028E10ST 5', mRNA sequence
Length = 698
Score = 81.8 bits (41), Expect = 5e-014
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 58 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 117
||||| || |||||||||||||| ||||| |||| ||||||||||| ||||| || |||
Sbjct: 311 gggaatagatggtctcaaattgcggcgcaattgccggggaggactgacaatgaaataaag 370
Query: 118 aatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcc 170
|||||||||||||| || | ||||||| |||||||| ||||| || |||||
Sbjct: 371 aatctatggaactcttgtttgaagaagagactgaggcaaaaaggtatagatcc 423
>gb|AW694738.1|AW694738 NF079D10ST1F1089 Developing stem Medicago truncatula cDNA clone
NF079D10ST 5', mRNA sequence
Length = 661
Score = 81.8 bits (41), Expect = 5e-014
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 58 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 117
||||| || |||||||||||||| ||||| |||| ||||||||||| ||||| || |||
Sbjct: 130 gggaatagatggtctcaaattgcggcgcaattgccggggaggactgacaatgaaataaag 189
Query: 118 aatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcc 170
|||||||||||||| || | ||||||| |||||||| ||||| || |||||
Sbjct: 190 aatctatggaactcttgtttgaagaagagactgaggcaaaaaggtatagatcc 242
>gb|AW691296.1|AW691296 NF040A12ST1F1000 Developing stem Medicago truncatula cDNA clone
NF040A12ST 5', mRNA sequence
Length = 657
Score = 69.9 bits (35), Expect = 2e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 58 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 117
||||| || ||||| |||||||| || || |||||||||||||||||||||| || |||
Sbjct: 358 gggaatagatggtcacaaattgctgcacaattgccagggaggactgataatgaaataaag 417
Query: 118 aatctatggaactcgtgcatcaagaagaagctgag 152
||||| ||||| || ||| | |||||||| |||||
Sbjct: 418 aatctttggaattcttgcttaaagaagaaactgag 452
>gb|BQ148302.1|BQ148302 NF065H07FL1F1064 Developing flower Medicago truncatula cDNA clone
NF065H07FL 5', mRNA sequence
Length = 679
Score = 69.9 bits (35), Expect = 2e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 58 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 117
||||| || ||||| |||||||| || || |||||||||||||||||||||| || |||
Sbjct: 66 gggaatagatggtcacaaattgctgcacaattgccagggaggactgataatgaaataaag 125
Query: 118 aatctatggaactcgtgcatcaagaagaagctgag 152
||||| ||||| || ||| | |||||||| |||||
Sbjct: 126 aatctttggaattcttgcttaaagaagaaactgag 160
>gb|AC137831.26| Medicago truncatula clone mth2-34o21, complete sequence
Length = 117693
Score = 67.9 bits (34), Expect = 7e-010
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 67 tggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 126
||||| |||||||| || || |||||||||||||||||||||| || |||||||| |||
Sbjct: 26347 tggtcacaaattgctgcacaattgccagggaggactgataatgaaataaagaatctttgg 26406
Query: 127 aactcgtgcatcaagaagaagctgag 152
|| || ||| | |||||||| |||||
Sbjct: 26407 aattcttgcttaaagaagaaactgag 26432
>gb|AC139745.29| Medicago truncatula clone mth2-17d15, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 111593
Score = 67.9 bits (34), Expect = 7e-010
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 67 tggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 126
||||| |||||||| || || |||||||||||||||||||||| || |||||||| |||
Sbjct: 84335 tggtcacaaattgctgcacaattgccagggaggactgataatgaaataaagaatctttgg 84394
Query: 127 aactcgtgcatcaagaagaagctgag 152
|| || ||| | |||||||| |||||
Sbjct: 84395 aattcttgcttaaagaagaaactgag 84420
>gb|BI311325.1|BI311325 EST5313075 GESD Medicago truncatula cDNA clone pGESD10F11 5' end,
mRNA sequence
Length = 795
Score = 63.9 bits (32), Expect = 1e-008
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 61 aacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaat 120
||||| |||||||| |||||||| || | ||||| || ||||| |||||||| || |||
Sbjct: 353 aacagatggtctcagattgcagcacaattaccaggaagaactgacaatgagattaaaaat 412
Query: 121 ctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccac 180
|||||||| || || ||||||||| | |||| || | ||||||||||| ||||| |||
Sbjct: 413 ctatggaattcatgtctcaagaagaggttgagacaaagtggcattgatccaaacacacac 472
Query: 181 aagccact 188
|| |||||
Sbjct: 473 aaaccact 480
>gb|BM779044.1|BM779044 EST589619 KV2 Medicago truncatula cDNA clone pKV2-22M11, mRNA
sequence
Length = 635
Score = 63.9 bits (32), Expect = 1e-008
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 61 aacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaat 120
||||| |||||||| |||||||| || | ||||| || ||||| |||||||| || |||
Sbjct: 316 aacagatggtctcagattgcagcacaattaccaggaagaactgacaatgagattaaaaat 375
Query: 121 ctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccac 180
|||||||| || || ||||||||| | |||| || | ||||||||||| ||||| |||
Sbjct: 376 ctatggaattcatgtctcaagaagaggttgagacaaagtggcattgatccaaacacacac 435
Query: 181 aagccact 188
|| |||||
Sbjct: 436 aaaccact 443
>gb|BI311933.1|BI311933 EST5313683 GESD Medicago truncatula cDNA clone pGESD15P16 5' end,
mRNA sequence
Length = 606
Score = 60.0 bits (30), Expect = 2e-007
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagc 148
|||| ||||||||||| ||||| || ||||||||||||||||| || | ||||||| |
Sbjct: 13 tgccggggaggactgacaatgaaataaagaatctatggaactcttgtctgaagaagagac 72
Query: 149 tgaggcagaaaggcattgatcc 170
||||||| ||||| || |||||
Sbjct: 73 tgaggcacaaaggtatagatcc 94
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence
Length = 110272
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 67 tggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 126
|||||||| |||||||| || | ||||| || ||||| |||||||| || |||||||||
Sbjct: 92820 tggtctcagattgcagcacaattaccaggaagaactgacaatgagattaaaaatctatgg 92761
Query: 127 aactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcca 186
|| || || ||||||||| | |||| || | ||||||||||| ||||| ||||| |||
Sbjct: 92760 aattcatgtctcaagaagaggttgagacaaagtggcattgatccaaacacacacaaacca 92701
Query: 187 ct 188
||
Sbjct: 92700 ct 92699
>emb|CR310935.1| mte1-32B18FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 684
Score = 40.1 bits (20), Expect = 0.17
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 caagacgaagaagacctcatcatc 39
||||| ||||||||||||||||||
Sbjct: 247 caagatgaagaagacctcatcatc 270
>gb|BI311137.1|BI311137 EST5312887 GESD Medicago truncatula cDNA clone pGESD10C23 5' end,
mRNA sequence
Length = 761
Score = 40.1 bits (20), Expect = 0.17
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 61 aacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaat 120
||||||||||| || |||||||| ||| | || || || || || |||||||| || |||
Sbjct: 406 aacaggtggtcgcagattgcagctcagttacctggaagaacagacaatgagataaaaaat 465
Query: 121 ctatggaa 128
||||||||
Sbjct: 466 ctatggaa 473
>gb|BQ147051.1|BQ147051 NF032A12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF032A12FL 5', mRNA sequence
Length = 445
Score = 40.1 bits (20), Expect = 0.17
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 caagacgaagaagacctcatcatc 39
||||| ||||||||||||||||||
Sbjct: 270 caagatgaagaagacctcatcatc 293
>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence
Length = 104281
Score = 40.1 bits (20), Expect = 0.17
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 caagacgaagaagacctcatcatc 39
||||| ||||||||||||||||||
Sbjct: 59687 caagatgaagaagacctcatcatc 59710
>emb|CR333542.1| mte1-63J3RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 490
Score = 38.2 bits (19), Expect = 0.65
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 63 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagat 113
||||||| ||||||||||||| || | ||||| || || |||||||||||
Sbjct: 68 caggtgggctcaaattgcagcacaattaccaggtagaacggataatgagat 18
>emb|CR296188.1| mte1-12F6RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 465
Score = 38.2 bits (19), Expect = 0.65
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 63 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagat 113
||||||| ||||||||||| | || | |||||||| || |||||||||||
Sbjct: 68 caggtgggctcaaattgcatcacaattaccagggagaacagataatgagat 18
>gb|CA918696.1|CA918696 EST636414 MTUS Medicago truncatula cDNA clone MTUS-2A4, mRNA
sequence
Length = 651
Score = 38.2 bits (19), Expect = 0.65
Identities = 35/39 (89%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 91 ccagggaggactgataatgagatcaagaatctatggaac 129
|||||||| || ||||||||||| |||||| ||||||||
Sbjct: 631 ccagggagaacagataatgagataaagaat-tatggaac 594
>gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete sequence
Length = 122251
Score = 38.2 bits (19), Expect = 0.65
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 63 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagat 113
||||||| ||||||||||||| || | ||||| || || |||||||||||
Sbjct: 81076 caggtgggctcaaattgcagcacaattaccaggtagaacggataatgagat 81126
>gb|AC126792.15| Medicago truncatula clone mth2-8o8, complete sequence
Length = 105297
Score = 38.2 bits (19), Expect = 0.65
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 91 ccagggaggactgataatgagatcaagaatctatggaac 129
||||| ||||| ||||||||||| |||||| | ||||||
Sbjct: 74667 ccaggaaggacagataatgagataaagaatttttggaac 74629
>gb|AC165430.2| Medicago truncatula chromosome 2 clone mth2-67a21, *** SEQUENCING IN
PROGRESS ***, 4 ordered pieces
Length = 114251
Score = 38.2 bits (19), Expect = 0.65
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 91 ccagggaggactgataatgagatcaagaatc 121
|||||||| || ||||||||||| |||||||
Sbjct: 82320 ccagggagaaccgataatgagataaagaatc 82350
>gb|AC150703.31| Medicago truncatula clone mth2-130k11, WORKING DRAFT SEQUENCE, 5
unordered pieces
Length = 148234
Score = 38.2 bits (19), Expect = 0.65
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 311 cggctcaatcatcaatgctgatg 333
||||||||||||||||| |||||
Sbjct: 41082 cggctcaatcatcaatgttgatg 41060
>gb|AW559860.1|AW559860 EST314908 DSIR Medicago truncatula cDNA clone pDSIR-24P6, mRNA
sequence
Length = 398
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 165 gggaggactgataatgag 182
>gb|AW773587.1|AW773587 EST332573 KV3 Medicago truncatula cDNA clone pKV3-15A5, mRNA
sequence
Length = 476
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 156 gggaggactgataatgag 173
>gb|BE124666.1|BE124666 EST393701 GVN Medicago truncatula cDNA clone pGVN-67A6, mRNA
sequence
Length = 536
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 327 gataatgagatcaagaat 344
>gb|BE204268.1|BE204268 EST396944 KV0 Medicago truncatula cDNA clone pKV0-15A24, mRNA
sequence
Length = 518
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 388 gataatgagatcaagaat 405
>gb|BF636153.1|BF636153 NF076B03DT1F1028 Drought Medicago truncatula cDNA clone NF076B03DT
5', mRNA sequence
Length = 674
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 377 gataatgagatcaagaat 394
>gb|AW697290.2|AW697290 NF117C03ST1F1020 Developing stem Medicago truncatula cDNA clone
NF117C03ST 5', mRNA sequence
Length = 316
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 227 gggaggactgataatgag 244
>gb|BE248284.2|BE248284 NF009B02DT1F1014 Drought Medicago truncatula cDNA clone NF009B02DT
5', mRNA sequence
Length = 564
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 443 gataatgagatcaagaat 460
>gb|BG451955.1|BG451955 NF043C09DT1F1067 Drought Medicago truncatula cDNA clone NF043C09DT
5', mRNA sequence
Length = 632
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 338 gataatgagatcaagaat 355
>gb|BG452297.1|BG452297 NF085E06LF1F1051 Developing leaf Medicago truncatula cDNA clone
NF085E06LF 5', mRNA sequence
Length = 687
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 452 gataatgagatcaagaat 469
>gb|BG452758.1|BG452758 NF080A04LF1F1022 Developing leaf Medicago truncatula cDNA clone
NF080A04LF 5', mRNA sequence
Length = 667
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 7 gataatgagatcaagaat 24
>gb|BG452989.1|BG452989 NF087G07LF1F1053 Developing leaf Medicago truncatula cDNA clone
NF087G07LF 5', mRNA sequence
Length = 570
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 449 gataatgagatcaagaat 466
>gb|BG453355.1|BG453355 NF090C05LF1F1035 Developing leaf Medicago truncatula cDNA clone
NF090C05LF 5', mRNA sequence
Length = 670
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 351 gataatgagatcaagaat 368
>gb|BQ255246.1|BQ255246 MTNAH39TKM KVKC Medicago truncatula cDNA clone pKVKC-8D3, mRNA
sequence
Length = 774
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 235 gggaggactgataatgag 252
>gb|CB891080.1|CB891080 EST648049 KV3 Medicago truncatula cDNA clone KV3-49E19, mRNA
sequence
Length = 597
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 186 gggaggactgataatgag 203
>gb|CA920846.1|CA920846 EST638564 MTUS Medicago truncatula cDNA clone MTUS-33H7, mRNA
sequence
Length = 806
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 637 gataatgagatcaagaat 620
>gb|AJ845798.1|AJ845798 AJ845798 MtSNF Medicago truncatula cDNA clone MtNF11A13N1, mRNA
sequence
Length = 796
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 278 gggaggactgataatgag 295
>gb|CX525863.1|CX525863 s13dNF31G02AT020_509470 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 613
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 452 gataatgagatcaagaat 469
>gb|CX526449.1|CX526449 s13dNF46A02AT017_510642 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 524
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 198 gggaggactgataatgag 215
>gb|DW016995.1|DW016995 EST1225956 MTY Medicago truncatula cDNA clone MTYAO19, mRNA
sequence
Length = 839
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 472 gataatgagatcaagaat 489
>gb|AC139707.10| Medicago truncatula clone mth2-16b22, complete sequence
Length = 113689
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 103 gataatgagatcaagaat 120
||||||||||||||||||
Sbjct: 46132 gataatgagatcaagaat 46115
>gb|AC144389.22| Medicago truncatula clone mth2-25e14, complete sequence
Length = 127170
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 265 tcaagcactggtcctctg 282
||||||||||||||||||
Sbjct: 92828 tcaagcactggtcctctg 92811
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete
sequence
Length = 127331
Score = 36.2 bits (18), Expect = 2.6
Identities = 54/66 (81%)
Strand = Plus / Minus
Query: 63 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatct 122
||||||||| || |||||||| ||| | || || || || || |||||||| || |||||
Sbjct: 26683 caggtggtcgcagattgcagctcagttacctggaagaacagacaatgagataaaaaatct 26624
Query: 123 atggaa 128
||||||
Sbjct: 26623 atggaa 26618
>gb|AC149492.14| Medicago truncatula clone mth2-99d10, complete sequence
Length = 124792
Score = 36.2 bits (18), Expect = 2.6
Identities = 42/50 (84%)
Strand = Plus / Plus
Query: 100 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagct 149
||||||||||| | |||||| | |||||||| ||||| || ||||||||
Sbjct: 58731 actgataatgaagtgaagaatttttggaactcttgcattaaaaagaagct 58780
>gb|AC174313.3| Medicago truncatula clone mth2-157i20, WORKING DRAFT SEQUENCE, 13
unordered pieces
Length = 108002
Score = 36.2 bits (18), Expect = 2.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 94 gggaggactgataatgag 111
||||||||||||||||||
Sbjct: 105723 gggaggactgataatgag 105740
Database: Mt_nucl_with_EST.fasta
Posted date: May 2, 2006 2:46 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 83,157
Number of Sequences: 392609
Number of extensions: 83157
Number of successful extensions: 6800
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6744
Number of HSP's gapped (non-prelim): 56
length of query: 480
length of database: 441,732,993
effective HSP length: 19
effective length of query: 461
effective length of database: 434,273,422
effective search space: 200200047542
effective search space used: 200200047542
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)