BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAS2h09.yg.3.5
(1992 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW691296.1|AW691296 NF040A12ST1F1000 Developing stem Med... 100 9e-019
gb|BI311325.1|BI311325 EST5313075 GESD Medicago truncatula ... 92 2e-016
gb|BM779044.1|BM779044 EST589619 KV2 Medicago truncatula cD... 92 2e-016
gb|AW690117.1|AW690117 NF028E10ST1F1000 Developing stem Med... 82 2e-013
gb|AW694738.1|AW694738 NF079D10ST1F1089 Developing stem Med... 82 2e-013
gb|BQ148302.1|BQ148302 NF065H07FL1F1064 Developing flower M... 70 8e-010
gb|BI311137.1|BI311137 EST5312887 GESD Medicago truncatula ... 68 3e-009
gb|AC137831.26| Medicago truncatula clone mth2-34o21, compl... 68 3e-009
gb|AC139745.29| Medicago truncatula clone mth2-17d15, WORKI... 68 3e-009
gb|AC165430.2| Medicago truncatula chromosome 2 clone mth2-... 64 5e-008
gb|BI311933.1|BI311933 EST5313683 GESD Medicago truncatula ... 60 8e-007
gb|AC148406.12| Medicago truncatula clone mth2-46e9, comple... 60 8e-007
emb|CR328843.1| mte1-58E1RM1 BAC end, cultivar Jemalong A17... 56 1e-005
emb|CR330377.1| mte1-6K1FM1 BAC end, cultivar Jemalong A17 ... 56 1e-005
emb|CT025844.1| Medicago truncatula chromosome 5 clone mte1... 56 1e-005
emb|CR296188.1| mte1-12F6RM1 BAC end, cultivar Jemalong A17... 52 2e-004
gb|BI269981.1|BI269981 NF003D12FL1F1102 Developing flower M... 50 7e-004
gb|BI271130.1|BI271130 NF005F07FL1F1063 Developing flower M... 50 7e-004
gb|BI271759.1|BI271759 NF018G03FL1F1023 Developing flower M... 48 0.003
emb|CR333542.1| mte1-63J3RM1 BAC end, cultivar Jemalong A17... 46 0.011
gb|BG448527.1|BG448527 NF036F04RT1F1032 Developing root Med... 46 0.011
gb|AC119413.16| Medicago truncatula clone mth2-19p2, comple... 46 0.011
gb|AC147877.10| Medicago truncatula clone mth2-9b13, comple... 46 0.011
gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone m... 46 0.011
emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2... 46 0.011
gb|BQ147314.1|BQ147314 NF039D02FL1F1025 Developing flower M... 44 0.045
gb|AC146583.25| Medicago truncatula clone mth2-12k10, WORKI... 44 0.045
gb|AJ501056.1|AJ501056 AJ501056 MTAMP Medicago truncatula c... 42 0.18
emb|CR346199.1| mte1-8B13FM1 BAC end, cultivar Jemalong A17... 40 0.71
emb|CR304749.1| mte1-24K5FM2 BAC end, cultivar Jemalong A17... 40 0.71
emb|CR310935.1| mte1-32B18FM1 BAC end, cultivar Jemalong A1... 40 0.71
gb|AW775893.1|AW775893 EST334958 DSIL Medicago truncatula c... 40 0.71
gb|AL373528.1|AL373528 MtBB01D01F1 MtBB Medicago truncatula... 40 0.71
gb|BF519041.1|BF519041 EST456501 DSIL Medicago truncatula c... 40 0.71
gb|BE324639.2|BE324639 NF024C04PL1F1023 Phosphate starved l... 40 0.71
gb|BG457971.1|BG457971 NF037A10PL1F1070 Phosphate starved l... 40 0.71
gb|BI272897.1|BI272897 NF091A12FL1F1088 Developing flower M... 40 0.71
gb|BQ146831.1|BQ146831 NF028G06FL1F1051 Developing flower M... 40 0.71
gb|BQ147051.1|BQ147051 NF032A12FL1F1097 Developing flower M... 40 0.71
gb|BQ147437.1|BQ147437 NF040F09FL1F1078 Developing flower M... 40 0.71
gb|CF067963.1|CF067963 EST668684 MTUS Medicago truncatula c... 40 0.71
gb|CX540018.1|CX540018 s13dNF43H03GS028_463308 Germinating ... 40 0.71
gb|CX540538.1|CX540538 s13dNF50F06GS047_464352 Germinating ... 40 0.71
gb|AC123899.15| Medicago truncatula clone mth2-33n6, comple... 40 0.71
gb|AC121235.20| Medicago truncatula clone mth2-21k24, compl... 40 0.71
gb|AC149129.3| Medicago truncatula chromosome 7 BAC clone m... 40 0.71
emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-1... 40 0.71
gb|AC129092.13| Medicago truncatula clone mth2-17n16, compl... 40 0.71
gb|CG919556.1|CG919556 MBENG76TF mth2 Medicago truncatula g... 38 2.8
gb|CG963562.1|CG963562 MBENM52TF mth2 Medicago truncatula g... 38 2.8
emb|CR329088.1| mte1-58K2RM1 BAC end, cultivar Jemalong A17... 38 2.8
emb|CR337095.1| mte1-68M4RM1 BAC end, cultivar Jemalong A17... 38 2.8
emb|CR304800.1| mte1-24O7RM1 BAC end, cultivar Jemalong A17... 38 2.8
emb|CR315341.1| mte1-39L11FM1 BAC end, cultivar Jemalong A1... 38 2.8
emb|CR315481.1| mte1-39N12FM1 BAC end, cultivar Jemalong A1... 38 2.8
gb|CA918696.1|CA918696 EST636414 MTUS Medicago truncatula c... 38 2.8
gb|AC137078.24| Medicago truncatula clone mth2-10e12, compl... 38 2.8
gb|AC142507.13| Medicago truncatula clone mth2-30h19, compl... 38 2.8
gb|AC142096.25| Medicago truncatula clone mth2-6m16, comple... 38 2.8
gb|AC126792.15| Medicago truncatula clone mth2-8o8, complet... 38 2.8
gb|AC161401.2| Medicago truncatula chromosome 7 clone mte1-... 38 2.8
gb|AC163897.4| Medicago truncatula chromosome 7 clone mth2-... 38 2.8
gb|AC137827.19| Medicago truncatula clone mth2-20g23, compl... 38 2.8
gb|AC150703.31| Medicago truncatula clone mth2-130k11, WORK... 38 2.8
gb|AC174277.7| Medicago truncatula clone mth2-5i22, WORKING... 38 2.8
>gb|AW691296.1|AW691296 NF040A12ST1F1000 Developing stem Medicago truncatula cDNA clone
NF040A12ST 5', mRNA sequence
Length = 657
Score = 99.6 bits (50), Expect = 9e-019
Identities = 266/338 (78%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
||||| ||||||||||||||||| || || || || ||||| |||||||||||||| |||
Sbjct: 115 tcttgttgctacaagcagaagcttaggaaaggtctatggtcacctgaggaggatgaaaaa 174
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactcgct 389
|| ||||||| || || || |||| ||||| || ||||| || ||||| || | ||
Sbjct: 175 cttttgaatcatattactaaatatggtcatggatgttggagttcagttcctaagcaagca 234
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|| |||||||| || || ||||| |||||||| |||||||| || || | ||||| ||
Sbjct: 235 ggtcttcaaagatgtggtaagagctgtaggcttaggtggattaattacttaaggcctgat 294
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
| || ||||| |||| | ||||| |||||| | |||||||| || || || | ||
Sbjct: 295 ttaaaaagaggtacattttcacaagaagaagaaaatctcatcattgaacttcattcagta 354
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
|| ||||| || ||||| |||||||| || || |||||||||||||||||||||| ||
Sbjct: 355 ctagggaatagatggtcacaaattgctgcacaattgccagggaggactgataatgaaata 414
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgag 607
|||||||| ||||| || ||| | |||||||| |||||
Sbjct: 415 aagaatctttggaattcttgcttaaagaagaaactgag 452
>gb|BI311325.1|BI311325 EST5313075 GESD Medicago truncatula cDNA clone pGESD10F11 5' end,
mRNA sequence
Length = 795
Score = 91.7 bits (46), Expect = 2e-016
Identities = 292/374 (78%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
|||||||||||||||||||| | || || || || ||||| |||||||| ||||||||
Sbjct: 107 tcttgctgctacaagcagaaattaaggaaaggactttggtctcctgaggaagatgagaag 166
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactcgct 389
|| ||||| |||| || || ||||| ||||| || ||||| || || |||||||| ||
Sbjct: 167 cttttgaattacattaccaaacatggtcatggatgttggagttcagtccccaaactagca 226
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|| | |||||||| || |||||||| ||| | || |||||||| || ||||||| ||
Sbjct: 227 ggtttgcaaaggtgtgggaagagttgcaggttaagatggataaattacttgaggcctgat 286
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
| || ||||| |||||| | ||| | ||||| | | ||||| || || || |||||
Sbjct: 287 ttgaaaagaggagcattctcacaacaagaagagaatttgatcattgaacttcatgctgta 346
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
|| || ||||| |||||||| |||||||| || | ||||| || ||||| ||||||||
Sbjct: 347 cttggtaacagatggtctcagattgcagcacaattaccaggaagaactgacaatgagatt 406
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 629
|| ||||||||||| || || ||||||||| | |||| || | ||||||||||| |||
Sbjct: 407 aaaaatctatggaattcatgtctcaagaagaggttgagacaaagtggcattgatccaaac 466
Query: 630 acccacaagccact 643
|| ||||| |||||
Sbjct: 467 acacacaaaccact 480
>gb|BM779044.1|BM779044 EST589619 KV2 Medicago truncatula cDNA clone pKV2-22M11, mRNA
sequence
Length = 635
Score = 91.7 bits (46), Expect = 2e-016
Identities = 292/374 (78%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
|||||||||||||||||||| | || || || || ||||| |||||||| ||||||||
Sbjct: 70 tcttgctgctacaagcagaaattaaggaaaggactttggtctcctgaggaagatgagaag 129
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactcgct 389
|| ||||| |||| || || ||||| ||||| || ||||| || || |||||||| ||
Sbjct: 130 cttttgaattacattaccaaacatggtcatggatgttggagttcagtccccaaactagca 189
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|| | |||||||| || |||||||| ||| | || |||||||| || ||||||| ||
Sbjct: 190 ggtttgcaaaggtgtgggaagagttgcaggttaagatggataaattacttgaggcctgat 249
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
| || ||||| |||||| | ||| | ||||| | | ||||| || || || |||||
Sbjct: 250 ttgaaaagaggagcattctcacaacaagaagagaatttgatcattgaacttcatgctgta 309
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
|| || ||||| |||||||| |||||||| || | ||||| || ||||| ||||||||
Sbjct: 310 cttggtaacagatggtctcagattgcagcacaattaccaggaagaactgacaatgagatt 369
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 629
|| ||||||||||| || || ||||||||| | |||| || | ||||||||||| |||
Sbjct: 370 aaaaatctatggaattcatgtctcaagaagaggttgagacaaagtggcattgatccaaac 429
Query: 630 acccacaagccact 643
|| ||||| |||||
Sbjct: 430 acacacaaaccact 443
>gb|AW690117.1|AW690117 NF028E10ST1F1000 Developing stem Medicago truncatula cDNA clone
NF028E10ST 5', mRNA sequence
Length = 698
Score = 81.8 bits (41), Expect = 2e-013
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 513 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 572
||||| || |||||||||||||| ||||| |||| ||||||||||| ||||| || |||
Sbjct: 311 gggaatagatggtctcaaattgcggcgcaattgccggggaggactgacaatgaaataaag 370
Query: 573 aatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcc 625
|||||||||||||| || | ||||||| |||||||| ||||| || |||||
Sbjct: 371 aatctatggaactcttgtttgaagaagagactgaggcaaaaaggtatagatcc 423
>gb|AW694738.1|AW694738 NF079D10ST1F1089 Developing stem Medicago truncatula cDNA clone
NF079D10ST 5', mRNA sequence
Length = 661
Score = 81.8 bits (41), Expect = 2e-013
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 513 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 572
||||| || |||||||||||||| ||||| |||| ||||||||||| ||||| || |||
Sbjct: 130 gggaatagatggtctcaaattgcggcgcaattgccggggaggactgacaatgaaataaag 189
Query: 573 aatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcc 625
|||||||||||||| || | ||||||| |||||||| ||||| || |||||
Sbjct: 190 aatctatggaactcttgtttgaagaagagactgaggcaaaaaggtatagatcc 242
>gb|BQ148302.1|BQ148302 NF065H07FL1F1064 Developing flower Medicago truncatula cDNA clone
NF065H07FL 5', mRNA sequence
Length = 679
Score = 69.9 bits (35), Expect = 8e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 513 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 572
||||| || ||||| |||||||| || || |||||||||||||||||||||| || |||
Sbjct: 66 gggaatagatggtcacaaattgctgcacaattgccagggaggactgataatgaaataaag 125
Query: 573 aatctatggaactcgtgcatcaagaagaagctgag 607
||||| ||||| || ||| | |||||||| |||||
Sbjct: 126 aatctttggaattcttgcttaaagaagaaactgag 160
>gb|BI311137.1|BI311137 EST5312887 GESD Medicago truncatula cDNA clone pGESD10C23 5' end,
mRNA sequence
Length = 761
Score = 67.9 bits (34), Expect = 3e-009
Identities = 166/210 (79%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||| || |||||||| ||||||||||||||||| | || || || |||||||| ||
Sbjct: 148 atgggaagacattcttgttgctacaagcagaagcttcgtaaaggtctttggtccccagaa 207
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 377
|| ||||| || || ||||| | || || || ||||| ||||| || |||||||| |||
Sbjct: 208 gaagatgaaaagcttttgaattatatcaccaaacatggtcatggatgttggagctcagtt 267
Query: 378 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 437
|| ||| | ||||| | || ||||| || ||||||||||| |||| |||||||| |||
Sbjct: 268 ccaaaattagctggtttgcagaggtgtgggaagagttgtagattgagatggataaattat 327
Query: 438 ctgaggccagacctcaagagaggggcattc 467
|| ||||| || | |||||||| ||||||
Sbjct: 328 ctaaggcctgatttgaagagaggagcattc 357
Score = 40.1 bits (20), Expect = 0.71
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 516 aacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaat 575
||||||||||| || |||||||| ||| | || || || || || |||||||| || |||
Sbjct: 406 aacaggtggtcgcagattgcagctcagttacctggaagaacagacaatgagataaaaaat 465
Query: 576 ctatggaa 583
||||||||
Sbjct: 466 ctatggaa 473
>gb|AC137831.26| Medicago truncatula clone mth2-34o21, complete sequence
Length = 117693
Score = 67.9 bits (34), Expect = 3e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 522 tggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 581
||||| |||||||| || || |||||||||||||||||||||| || |||||||| |||
Sbjct: 26347 tggtcacaaattgctgcacaattgccagggaggactgataatgaaataaagaatctttgg 26406
Query: 582 aactcgtgcatcaagaagaagctgag 607
|| || ||| | |||||||| |||||
Sbjct: 26407 aattcttgcttaaagaagaaactgag 26432
Score = 61.9 bits (31), Expect = 2e-007
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
||||| ||||||||||||||||| || || || || ||||| |||||||||||||| |||
Sbjct: 25790 tcttgttgctacaagcagaagcttaggaaaggtctatggtcacctgaggaggatgaaaaa 25849
Query: 330 ctcatgaatca 340
|| |||||||
Sbjct: 25850 cttttgaatca 25860
>gb|AC139745.29| Medicago truncatula clone mth2-17d15, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 111593
Score = 67.9 bits (34), Expect = 3e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 522 tggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 581
||||| |||||||| || || |||||||||||||||||||||| || |||||||| |||
Sbjct: 84335 tggtcacaaattgctgcacaattgccagggaggactgataatgaaataaagaatctttgg 84394
Query: 582 aactcgtgcatcaagaagaagctgag 607
|| || ||| | |||||||| |||||
Sbjct: 84395 aattcttgcttaaagaagaaactgag 84420
Score = 61.9 bits (31), Expect = 2e-007
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
||||| ||||||||||||||||| || || || || ||||| |||||||||||||| |||
Sbjct: 83778 tcttgttgctacaagcagaagcttaggaaaggtctatggtcacctgaggaggatgaaaaa 83837
Query: 330 ctcatgaatca 340
|| |||||||
Sbjct: 83838 cttttgaatca 83848
>gb|AC165430.2| Medicago truncatula chromosome 2 clone mth2-67a21, *** SEQUENCING IN
PROGRESS ***, 4 ordered pieces
Length = 114251
Score = 63.9 bits (32), Expect = 5e-008
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|||||| ||||||| || ||||||||||| || |||||||| |||||||| ||||||||
Sbjct: 78976 gggcttgaaaggtgtggtaagagttgtagactaaggtggatgaactatctaaggccagat 79035
Query: 450 ctcaagagaggg 461
|||| ||||||
Sbjct: 79036 gtcaaaagaggg 79047
Score = 50.1 bits (25), Expect = 7e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 397 aaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaaga 456
||||||| || ||||||||||| || |||||| | |||||||| |||||||| |||| |
Sbjct: 97645 aaaggtgtgggaagagttgtagactaaggtggttgaactatctaaggccagatatcaaaa 97704
Query: 457 gaggg 461
|||||
Sbjct: 97705 gaggg 97709
Score = 38.2 bits (19), Expect = 2.8
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 546 ccagggaggactgataatgagatcaagaatc 576
|||||||| || ||||||||||| |||||||
Sbjct: 82320 ccagggagaaccgataatgagataaagaatc 82350
>gb|BI311933.1|BI311933 EST5313683 GESD Medicago truncatula cDNA clone pGESD15P16 5' end,
mRNA sequence
Length = 606
Score = 60.0 bits (30), Expect = 8e-007
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagc 603
|||| ||||||||||| ||||| || ||||||||||||||||| || | ||||||| |
Sbjct: 13 tgccggggaggactgacaatgaaataaagaatctatggaactcttgtctgaagaagagac 72
Query: 604 tgaggcagaaaggcattgatcc 625
||||||| ||||| || |||||
Sbjct: 73 tgaggcacaaaggtatagatcc 94
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence
Length = 110272
Score = 60.0 bits (30), Expect = 8e-007
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 522 tggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgg 581
|||||||| |||||||| || | ||||| || ||||| |||||||| || |||||||||
Sbjct: 92820 tggtctcagattgcagcacaattaccaggaagaactgacaatgagattaaaaatctatgg 92761
Query: 582 aactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcca 641
|| || || ||||||||| | |||| || | ||||||||||| ||||| ||||| |||
Sbjct: 92760 aattcatgtctcaagaagaggttgagacaaagtggcattgatccaaacacacacaaacca 92701
Query: 642 ct 643
||
Sbjct: 92700 ct 92699
Score = 56.0 bits (28), Expect = 1e-005
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
|||||||||||||||||||| | || || || || ||||| |||||||| ||||||||
Sbjct: 93245 tcttgctgctacaagcagaaattaaggaaaggactttggtctcctgaggaagatgagaag 93186
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaact 385
|| ||||| |||| || || ||||| ||||| || ||||| || || ||||||||
Sbjct: 93185 cttttgaattacattaccaaacatggtcatggatgttggagttcagtccccaaact 93130
>emb|CR328843.1| mte1-58E1RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 641
Score = 56.0 bits (28), Expect = 1e-005
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
|||||||||||||||||||| | || || || || ||||| |||||||| ||||||||
Sbjct: 481 tcttgctgctacaagcagaaattaaggaaaggactttggtctcctgaggaagatgagaag 540
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaact 385
|| ||||| |||| || || ||||| ||||| || ||||| || || ||||||||
Sbjct: 541 cttttgaattacattaccaaacatggtcatggatgttggagttcagtccccaaact 596
>emb|CR330377.1| mte1-6K1FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 697
Score = 56.0 bits (28), Expect = 1e-005
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 270 tcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaa 329
|||||||||||||||||||| | || || || || ||||| |||||||| ||||||||
Sbjct: 490 tcttgctgctacaagcagaaattaaggaaaggactttggtctcctgaggaagatgagaag 549
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaact 385
|| ||||| |||| || || ||||| ||||| || ||||| || || ||||||||
Sbjct: 550 cttttgaattacattaccaaacatggtcatggatgttggagttcagtccccaaact 605
>emb|CT025844.1| Medicago truncatula chromosome 5 clone mte1-41h18, COMPLETE SEQUENCE
Length = 103321
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaa 433
|||||||||||||| || |||||||||||| |||| ||||||||
Sbjct: 67967 gggcttcaaaggtgtggtaagagttgtaggttgagatggataaa 68010
>emb|CR296188.1| mte1-12F6RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 465
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 396 caaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggcc 445
|||||||| |||||||| ||||| |||| |||||||||||| |||||||
Sbjct: 264 caaaggtgtggaaagagctgtagattgagatggataaactatttgaggcc 215
Score = 38.2 bits (19), Expect = 2.8
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 518 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagat 568
||||||| ||||||||||| | || | |||||||| || |||||||||||
Sbjct: 68 caggtgggctcaaattgcatcacaattaccagggagaacagataatgagat 18
>gb|BI269981.1|BI269981 NF003D12FL1F1102 Developing flower Medicago truncatula cDNA clone
NF003D12FL 5', mRNA sequence
Length = 661
Score = 50.1 bits (25), Expect = 7e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 397 aaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaaga 456
||||||| || ||||||||||| || |||||| | |||||||| |||||||| |||| |
Sbjct: 237 aaaggtgtgggaagagttgtagactaaggtggttgaactatctaaggccagatatcaaaa 296
Query: 457 gaggg 461
|||||
Sbjct: 297 gaggg 301
>gb|BI271130.1|BI271130 NF005F07FL1F1063 Developing flower Medicago truncatula cDNA clone
NF005F07FL 5', mRNA sequence
Length = 654
Score = 50.1 bits (25), Expect = 7e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 397 aaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaaga 456
||||||| || ||||||||||| || |||||| | |||||||| |||||||| |||| |
Sbjct: 137 aaaggtgtgggaagagttgtagactaaggtggttgaactatctaaggccagatatcaaaa 196
Query: 457 gaggg 461
|||||
Sbjct: 197 gaggg 201
>gb|BI271759.1|BI271759 NF018G03FL1F1023 Developing flower Medicago truncatula cDNA clone
NF018G03FL 5', mRNA sequence
Length = 379
Score = 48.1 bits (24), Expect = 0.003
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 361 gctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttg 415
|||||||||||||||| || ||||| ||||| || || || |||||||||| |||
Sbjct: 194 gctgctggagctctgtaccaaaacttgctggtctgcagagatgcggaaaganttg 248
>emb|CR333542.1| mte1-63J3RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.011
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 396 caaaggtgcggaaagagttgtaggctgaggtggataaactatctgag 442
||||| || |||||||||||||| |||| ||||| |||||||||||
Sbjct: 310 caaagatgtggaaagagttgtagattgagatggatcaactatctgag 264
Score = 38.2 bits (19), Expect = 2.8
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 518 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagat 568
||||||| ||||||||||||| || | ||||| || || |||||||||||
Sbjct: 68 caggtgggctcaaattgcagcacaattaccaggtagaacggataatgagat 18
>gb|BG448527.1|BG448527 NF036F04RT1F1032 Developing root Medicago truncatula cDNA clone
NF036F04RT 5', mRNA sequence
Length = 633
Score = 46.1 bits (23), Expect = 0.011
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || |||||||||||| | ||||||| ||| ||| ||||||| || ||||||||
Sbjct: 181 aggtgtgggaagagttgtaggttaaggtggacaaattatttgaggcctgatatcaagaga 240
Query: 459 ggg 461
|||
Sbjct: 241 ggg 243
>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence
Length = 113431
Score = 46.1 bits (23), Expect = 0.011
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || |||||||||||| | ||||||| ||| ||| ||||||| || ||||||||
Sbjct: 22961 aggtgtgggaagagttgtaggttaaggtggacaaattatttgaggcctgatatcaagaga 23020
Query: 459 ggg 461
|||
Sbjct: 23021 ggg 23023
>gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete sequence
Length = 122251
Score = 46.1 bits (23), Expect = 0.011
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 396 caaaggtgcggaaagagttgtaggctgaggtggataaactatctgag 442
||||| || |||||||||||||| |||| ||||| |||||||||||
Sbjct: 80834 caaagatgtggaaagagttgtagattgagatggatcaactatctgag 80880
Score = 38.2 bits (19), Expect = 2.8
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 518 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagat 568
||||||| ||||||||||||| || | ||||| || || |||||||||||
Sbjct: 81076 caggtgggctcaaattgcagcacaattaccaggtagaacggataatgagat 81126
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete
sequence
Length = 127331
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 258 atggggaggcattcttgctgctacaagcagaagct 292
||||| || |||||||| |||||||||||||||||
Sbjct: 27199 atgggaagacattcttgttgctacaagcagaagct 27165
Score = 42.1 bits (21), Expect = 0.18
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || ||||||||||| |||| |||||||| ||||| ||||| || | ||||||
Sbjct: 26950 aggtgtgggaagagttgtagattgagatggataaattatctaaggcctgatttgaagaga 26891
Query: 459 ggggcattc 467
|| ||||||
Sbjct: 26890 ggagcattc 26882
>emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p13, COMPLETE SEQUENCE
Length = 116834
Score = 46.1 bits (23), Expect = 0.011
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || |||||||||||| | ||||||| ||| ||| ||||||| || ||||||||
Sbjct: 66320 aggtgtgggaagagttgtaggttaaggtggacaaattatttgaggcctgatatcaagaga 66379
Query: 459 ggg 461
|||
Sbjct: 66380 ggg 66382
>gb|BQ147314.1|BQ147314 NF039D02FL1F1025 Developing flower Medicago truncatula cDNA clone
NF039D02FL 5', mRNA sequence
Length = 595
Score = 44.1 bits (22), Expect = 0.045
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 387 gctgggcttcaaaggtgcggaaagagttgt 416
||||||||||||||||| || |||||||||
Sbjct: 228 gctgggcttcaaaggtgtggtaagagttgt 257
>gb|AC146583.25| Medicago truncatula clone mth2-12k10, WORKING DRAFT SEQUENCE, 3 ordered
pieces
Length = 122434
Score = 44.1 bits (22), Expect = 0.045
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 348 aagcatggccatggctgctggagctctgttccca 381
|||||||| ||| |||||||||||||||| ||||
Sbjct: 113136 aagcatggtcatagctgctggagctctgtcccca 113169
Score = 42.1 bits (21), Expect = 0.18
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 405 ggaaagagttgtaggctgaggtggataaactatctgaggcc 445
||||||||||| || || |||||||| ||||| ||||||||
Sbjct: 114124 ggaaagagttgcagactaaggtggattaactacctgaggcc 114164
>gb|AJ501056.1|AJ501056 AJ501056 MTAMP Medicago truncatula cDNA clone mtgmadc120002c06,
mRNA sequence
Length = 614
Score = 42.1 bits (21), Expect = 0.18
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 405 ggaaagagttgtaggctgaggtgga 429
||||||||||||||||| |||||||
Sbjct: 203 ggaaagagttgtaggctaaggtgga 227
>emb|CR346199.1| mte1-8B13FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 736
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 370 cggaaagagttgcaggcttcggtggctaaactatct 335
>emb|CR304749.1| mte1-24K5FM2 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 604
Score = 40.1 bits (20), Expect = 0.71
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1846 ctggtggaaattaaataaat 1865
||||||||||||||||||||
Sbjct: 276 ctggtggaaattaaataaat 257
>emb|CR310935.1| mte1-32B18FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 684
Score = 40.1 bits (20), Expect = 0.71
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 471 caagacgaagaagacctcatcatc 494
||||| ||||||||||||||||||
Sbjct: 247 caagatgaagaagacctcatcatc 270
>gb|AW775893.1|AW775893 EST334958 DSIL Medicago truncatula cDNA clone pDSIL-3M20, mRNA
sequence
Length = 730
Score = 40.1 bits (20), Expect = 0.71
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 424 ggtggataaactatctgaggccagacct 451
||||||| |||||||| |||||||||||
Sbjct: 273 ggtggattaactatctcaggccagacct 300
>gb|AL373528.1|AL373528 MtBB01D01F1 MtBB Medicago truncatula cDNA clone MtBB01D01 T3, mRNA
sequence
Length = 468
Score = 40.1 bits (20), Expect = 0.71
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 424 ggtggataaactatctgaggccagacct 451
||||||| |||||||| |||||||||||
Sbjct: 262 ggtggattaactatctcaggccagacct 289
>gb|BF519041.1|BF519041 EST456501 DSIL Medicago truncatula cDNA clone pDSIL-19D23, mRNA
sequence
Length = 626
Score = 40.1 bits (20), Expect = 0.71
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 424 ggtggataaactatctgaggccagacct 451
||||||| |||||||| |||||||||||
Sbjct: 118 ggtggattaactatctcaggccagacct 145
>gb|BE324639.2|BE324639 NF024C04PL1F1023 Phosphate starved leaf Medicago truncatula cDNA
clone NF024C04PL 5', mRNA sequence
Length = 558
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 202 cggaaagagttgcaggcttcggtggctaaactatct 237
>gb|BG457971.1|BG457971 NF037A10PL1F1070 Phosphate starved leaf Medicago truncatula cDNA
clone NF037A10PL 5', mRNA sequence
Length = 669
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 202 cggaaagagttgcaggcttcggtggctaaactatct 237
>gb|BI272897.1|BI272897 NF091A12FL1F1088 Developing flower Medicago truncatula cDNA clone
NF091A12FL 5', mRNA sequence
Length = 688
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 201 cggaaagagttgcaggcttcggtggctaaactatct 236
>gb|BQ146831.1|BQ146831 NF028G06FL1F1051 Developing flower Medicago truncatula cDNA clone
NF028G06FL 5', mRNA sequence
Length = 682
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 199 cggaaagagttgcaggcttcggtggctaaactatct 234
>gb|BQ147051.1|BQ147051 NF032A12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF032A12FL 5', mRNA sequence
Length = 445
Score = 40.1 bits (20), Expect = 0.71
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 471 caagacgaagaagacctcatcatc 494
||||| ||||||||||||||||||
Sbjct: 270 caagatgaagaagacctcatcatc 293
>gb|BQ147437.1|BQ147437 NF040F09FL1F1078 Developing flower Medicago truncatula cDNA clone
NF040F09FL 5', mRNA sequence
Length = 703
Score = 40.1 bits (20), Expect = 0.71
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 424 ggtggataaactatctgaggccagacct 451
||||||| |||||||| |||||||||||
Sbjct: 437 ggtggattaactatctcaggccagacct 464
>gb|CF067963.1|CF067963 EST668684 MTUS Medicago truncatula cDNA clone MTUS-2A4, mRNA
sequence
Length = 727
Score = 40.1 bits (20), Expect = 0.71
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 424 ggtggataaactatctgaggccagacct 451
||||||| |||||||| |||||||||||
Sbjct: 255 ggtggattaactatctcaggccagacct 282
>gb|CX540018.1|CX540018 s13dNF43H03GS028_463308 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 602
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 193 cggaaagagttgcaggcttcggtggctaaactatct 228
>gb|CX540538.1|CX540538 s13dNF50F06GS047_464352 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 304
Score = 40.1 bits (20), Expect = 0.71
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 404 cggaaagagttgtaggctgaggtggataaactatct 439
|||||||||||| ||||| ||||| ||||||||||
Sbjct: 30 cggaaagagttgcaggcttcggtggctaaactatct 65
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
Length = 127126
Score = 40.1 bits (20), Expect = 0.71
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 408 aagagttgtaggctgaggtggataaactatct 439
|||||||||||||| ||||||| ||||||||
Sbjct: 74966 aagagttgtaggcttaggtggaccaactatct 74997
>gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete sequence
Length = 116205
Score = 40.1 bits (20), Expect = 0.71
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 424 ggtggataaactatctgaggccagacct 451
||||||| |||||||| |||||||||||
Sbjct: 101083 ggtggattaactatctcaggccagacct 101110
>gb|AC149129.3| Medicago truncatula chromosome 7 BAC clone mth2-139m18, complete
sequence
Length = 106423
Score = 40.1 bits (20), Expect = 0.71
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1846 ctggtggaaattaaataaat 1865
||||||||||||||||||||
Sbjct: 84816 ctggtggaaattaaataaat 84835
>emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-193I1 on chromosome 3,
complete sequence
Length = 119364
Score = 40.1 bits (20), Expect = 0.71
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1962 attattgcatgttgtatttttcat 1985
||||||| ||||||||||||||||
Sbjct: 94225 attattgtatgttgtatttttcat 94202
>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence
Length = 104281
Score = 40.1 bits (20), Expect = 0.71
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 471 caagacgaagaagacctcatcatc 494
||||| ||||||||||||||||||
Sbjct: 59687 caagatgaagaagacctcatcatc 59710
>gb|CG919556.1|CG919556 MBENG76TF mth2 Medicago truncatula genomic clone 7N7, DNA sequence
Length = 867
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1852 gaaattaaataaatataga 1870
|||||||||||||||||||
Sbjct: 522 gaaattaaataaatataga 540
>gb|CG963562.1|CG963562 MBENM52TF mth2 Medicago truncatula genomic clone 9I7, DNA sequence
Length = 883
Score = 38.2 bits (19), Expect = 2.8
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgt 416
|||||||||||||| || |||||||||
Sbjct: 737 gggcttcaaaggtgtggtaagagttgt 763
>emb|CR329088.1| mte1-58K2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 563
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1852 gaaattaaataaatataga 1870
|||||||||||||||||||
Sbjct: 354 gaaattaaataaatataga 372
>emb|CR337095.1| mte1-68M4RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 639
Score = 38.2 bits (19), Expect = 2.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 258 atggggaggcattcttgctgctacaagcagaagct 292
||||| || |||| ||| |||||||||||||||||
Sbjct: 338 atgggaagacattattgttgctacaagcagaagct 304
Score = 38.2 bits (19), Expect = 2.8
Identities = 40/47 (85%)
Strand = Plus / Minus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggcc 445
||||| || ||||||||||| |||| |||||||| ||||| |||||
Sbjct: 89 aggtgtgggaagagttgtagattgagatggataaattatctaaggcc 43
>emb|CR304800.1| mte1-24O7RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 555
Score = 38.2 bits (19), Expect = 2.8
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1856 ttaaataaatatagatagccata 1878
||||||||||||||||| |||||
Sbjct: 473 ttaaataaatatagatacccata 451
>emb|CR315341.1| mte1-39L11FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 748
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1852 gaaattaaataaatataga 1870
|||||||||||||||||||
Sbjct: 271 gaaattaaataaatataga 253
>emb|CR315481.1| mte1-39N12FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 763
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1852 gaaattaaataaatataga 1870
|||||||||||||||||||
Sbjct: 280 gaaattaaataaatataga 262
>gb|CA918696.1|CA918696 EST636414 MTUS Medicago truncatula cDNA clone MTUS-2A4, mRNA
sequence
Length = 651
Score = 38.2 bits (19), Expect = 2.8
Identities = 35/39 (89%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 546 ccagggaggactgataatgagatcaagaatctatggaac 584
|||||||| || ||||||||||| |||||| ||||||||
Sbjct: 631 ccagggagaacagataatgagataaagaat-tatggaac 594
>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence
Length = 144306
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1969 catgttgtatttttcattt 1987
|||||||||||||||||||
Sbjct: 60808 catgttgtatttttcattt 60790
>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence
Length = 117666
Score = 38.2 bits (19), Expect = 2.8
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1016 cttcaactgcagcacaatttcta 1038
||||||||| |||||||||||||
Sbjct: 42596 cttcaactgaagcacaatttcta 42618
>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence
Length = 129053
Score = 38.2 bits (19), Expect = 2.8
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1016 cttcaactgcagcacaatttcta 1038
||||||||| |||||||||||||
Sbjct: 109061 cttcaactgaagcacaatttcta 109039
>gb|AC126792.15| Medicago truncatula clone mth2-8o8, complete sequence
Length = 105297
Score = 38.2 bits (19), Expect = 2.8
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 546 ccagggaggactgataatgagatcaagaatctatggaac 584
||||| ||||| ||||||||||| |||||| | ||||||
Sbjct: 74667 ccaggaaggacagataatgagataaagaatttttggaac 74629
>gb|AC161401.2| Medicago truncatula chromosome 7 clone mte1-59b16, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 95675
Score = 38.2 bits (19), Expect = 2.8
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1856 ttaaataaatatagatagccata 1878
||||||||||||||||| |||||
Sbjct: 49526 ttaaataaatatagatacccata 49504
>gb|AC163897.4| Medicago truncatula chromosome 7 clone mth2-58l23, *** SEQUENCING IN
PROGRESS ***, 4 ordered pieces
Length = 128418
Score = 38.2 bits (19), Expect = 2.8
Identities = 52/63 (82%)
Strand = Plus / Minus
Query: 398 aaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||||| | || ||||| ||||| || |||| ||| ||||||||||||| |||||||
Sbjct: 81361 aaggtgcagcaaaagttgcaggcttagatggacaaattatctgaggccaggaatcaagag 81302
Query: 458 agg 460
|||
Sbjct: 81301 agg 81299
>gb|AC137827.19| Medicago truncatula clone mth2-20g23, complete sequence
Length = 105960
Score = 38.2 bits (19), Expect = 2.8
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1814 tgaacttttgcatatttgagtttttgt 1840
|||| |||||||||||||| |||||||
Sbjct: 18002 tgaagttttgcatatttgattttttgt 17976
>gb|AC150703.31| Medicago truncatula clone mth2-130k11, WORKING DRAFT SEQUENCE, 5
unordered pieces
Length = 148234
Score = 38.2 bits (19), Expect = 2.8
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 766 cggctcaatcatcaatgctgatg 788
||||||||||||||||| |||||
Sbjct: 41082 cggctcaatcatcaatgttgatg 41060
>gb|AC174277.7| Medicago truncatula clone mth2-5i22, WORKING DRAFT SEQUENCE, 2 unordered
pieces
Length = 173882
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1969 catgttgtatttttcattt 1987
|||||||||||||||||||
Sbjct: 111054 catgttgtatttttcattt 111072
Database: Mt_nucl_with_EST.fasta
Posted date: May 2, 2006 2:46 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 541,080
Number of Sequences: 392609
Number of extensions: 541080
Number of successful extensions: 43260
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 42886
Number of HSP's gapped (non-prelim): 374
length of query: 1992
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1972
effective length of database: 433,880,813
effective search space: 855612963236
effective search space used: 855612963236
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)