BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8011540.2.1
(1916 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY162176.1| Medicago truncatula somatic embryogenesis re... 258 2e-066
gb|AY162177.1| Medicago truncatula somatic embryogenesis re... 228 1e-057
gb|CB892245.1|CB892245 EST649214 KV3 Medicago truncatula cD... 198 1e-048
gb|BF520153.1|BF520153 EST457622 DSIL Medicago truncatula c... 190 3e-046
gb|BG647340.1|BG647340 EST508959 HOGA Medicago truncatula c... 157 4e-036
gb|BQ255362.1|BQ255362 MTNAL79TKM KVKC Medicago truncatula ... 149 1e-033
gb|BQ147240.1|BQ147240 NF038C06FL1F1050 Developing flower M... 141 2e-031
gb|CB894219.1|CB894219 EST647011 HOGA Medicago truncatula c... 139 1e-030
gb|CL314504.1|CL314504 mth2-131O17_T7 Medicago truncatula B... 119 9e-025
gb|AW689066.1|AW689066 NF015A05ST1F1000 Developing stem Med... 100 9e-019
gb|CX535105.1|CX535105 s13dNF84B03MJ029_388388 Methyl Jasmo... 94 5e-017
gb|CG953747.1|CG953747 MBELN16TF mth2 Medicago truncatula g... 80 8e-013
gb|BH001076.1|BH001076 T122530b Medicago truncatula BAC lib... 78 3e-012
gb|BF004020.1|BF004020 EST432518 KV1 Medicago truncatula cD... 74 5e-011
gb|CA923216.1|CA923216 EST640934 MTUS Medicago truncatula c... 74 5e-011
emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2... 74 5e-011
emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2... 74 5e-011
gb|AW773590.1|AW773590 EST332576 KV3 Medicago truncatula cD... 72 2e-010
gb|CX527768.1|CX527768 s13dNF47B09AT077_516048 Aphid-Infect... 72 2e-010
gb|AW688532.2|AW688532 NF008F10ST1F1000 Developing stem Med... 66 1e-008
gb|AC126784.11| Medicago truncatula clone mth2-36b12, compl... 60 7e-007
emb|CR324716.1| mte1-52A5RM1 BAC end, cultivar Jemalong A17... 56 1e-005
gb|CX534553.1|CX534553 s13dNF47G08MJ068_330813 Methyl Jasmo... 56 1e-005
gb|AC144389.22| Medicago truncatula clone mth2-25e14, compl... 56 1e-005
gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone m... 56 1e-005
gb|AC140670.6| Medicago truncatula clone mth2-10o11, WORKIN... 56 1e-005
emb|CR304774.1| mte1-24M5RM1 BAC end, cultivar Jemalong A17... 52 2e-004
gb|AW573907.1|AW573907 EST316498 GVN Medicago truncatula cD... 46 0.011
gb|BF638206.1|BF638206 NF045B06PL1F1047 Phosphate starved l... 46 0.011
gb|BF649190.1|BF649190 NF056E03EC1F1021 Elicited cell cultu... 46 0.011
gb|BF649886.1|BF649886 NF085C09EC1F1068 Elicited cell cultu... 46 0.011
gb|BG645064.1|BG645064 EST506683 KV3 Medicago truncatula cD... 46 0.011
gb|BG647967.1|BG647967 EST509586 HOGA Medicago truncatula c... 46 0.011
gb|CA917424.1|CA917424 EST641571 GPOD Medicago truncatula c... 46 0.011
emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2... 46 0.011
gb|CG941992.1|CG941992 MBEFJ74TF mth2 Medicago truncatula g... 44 0.043
gb|AW328935.2|AW328935 N200127e rootphos(-) Medicago trunca... 44 0.043
gb|AL389838.1|AL389838 MtBC57G06F1 MtBC Medicago truncatula... 44 0.043
gb|BF520845.1|BF520845 EST458318 DSIL Medicago truncatula c... 44 0.043
gb|CB893635.1|CB893635 EST646427 HOGA Medicago truncatula c... 44 0.043
gb|AC140029.19| Medicago truncatula clone mth2-20g24, compl... 44 0.043
gb|AC163384.3| Medicago truncatula chromosome 7 clone mth2-... 44 0.043
gb|AC174314.2| Medicago truncatula clone mth2-160p14, WORKI... 44 0.043
gb|CG938592.1|CG938592 MBEIP81TF mth2 Medicago truncatula g... 42 0.17
gb|BF519919.1|BF519919 EST457385 DSIL Medicago truncatula c... 42 0.17
gb|BF643238.1|BF643238 NF002H05EC1F1045 Elicited cell cultu... 42 0.17
gb|BF645214.1|BF645214 NF032F11EC1F1094 Elicited cell cultu... 42 0.17
gb|BF645884.1|BF645884 NF032C10EC1F1081 Elicited cell cultu... 42 0.17
gb|BF647243.1|BF647243 NF110A01EC1F1003 Elicited cell cultu... 42 0.17
gb|BF647244.1|BF647244 NF065H08EC1F1075 Elicited cell cultu... 42 0.17
gb|BF649797.1|BF649797 NF081E08EC1F1065 Elicited cell cultu... 42 0.17
gb|AW691218.2|AW691218 NF039B02ST1F1000 Developing stem Med... 42 0.17
gb|AW693280.2|AW693280 NF062D03ST1F1000 Developing stem Med... 42 0.17
gb|BG458124.1|BG458124 NF052H09PL1F1077 Phosphate starved l... 42 0.17
gb|BG648699.1|BG648699 EST510318 HOGA Medicago truncatula c... 42 0.17
gb|AJ502644.1|AJ502644 AJ502644 MTAMP Medicago truncatula c... 42 0.17
gb|CA917812.1|CA917812 EST641959 GPOD Medicago truncatula c... 42 0.17
gb|CB891566.1|CB891566 EST648535 KV3 Medicago truncatula cD... 42 0.17
gb|CF068241.1|CF068241 EST668962 MTUS Medicago truncatula c... 42 0.17
gb|CF068251.1|CF068251 EST668972 MTUS Medicago truncatula c... 42 0.17
gb|CX523997.1|CX523997 s13dNF12D09AT074_447338 Aphid-Infect... 42 0.17
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1)
mRNA, complete cds
Length = 2392
Score = 258 bits (130), Expect = 2e-066
Identities = 319/382 (83%)
Strand = Plus / Plus
Query: 1451 tgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatcatccatc 1510
||||||| || || |||||||| || ||||||||||| || || || || ||||| ||||
Sbjct: 1459 tgggatcagctaggggtctttcatatttgcatgatcattgtgacccaaaaatcattcatc 1518
Query: 1511 gggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgtaggtgatt 1570
| || || |||||||| || || | |||||||| ||||||||||| || || || ||||
Sbjct: 1519 gtgacgtgaaagctgctaacatattgttggatgaagagtttgaggctgttgtgggggatt 1578
Query: 1571 tcgggcttgccaagcttatggactacaaggatacccatgtcacaactgctgttcgtggaa 1630
| || | || || |||||||| |||||||| |||||||| |||||||||||||| || |
Sbjct: 1579 ttggattggcaaaacttatggattacaaggacacccatgttacaactgctgttcggggta 1638
Query: 1631 caattggacacattgctcccgagtacctatccactggcaagtcctctgaaaagaccgatg 1690
||||||| || || ||||||||||||||||| ||||||||||| || || || || ||||
Sbjct: 1639 caattgggcatatagctcccgagtacctatctactggcaagtcttcagagaaaactgatg 1698
Query: 1691 tttttggatatgggatcatgcttctggagcttattactggacagagggcatttgatctag 1750
||||||| ||||| ||||||||||| |||||||| |||||||| || || ||||| || |
Sbjct: 1699 tttttggttatggtatcatgcttcttgagcttataactggacaaagagcttttgaccttg 1758
Query: 1751 ctcgtcttgcaaatgatgatgatgttatgcttcttgactgggtgaaaggactgctgaagg 1810
|||| ||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||| |
Sbjct: 1759 ctcgacttgcgaatgatgatgatgttatgctgcttgattgggtaaaaggacttctgaaag 1818
Query: 1811 agaaaaaggtggagatgttggt 1832
|||||||| | || ||||||||
Sbjct: 1819 agaaaaagcttgaaatgttggt 1840
Score = 172 bits (87), Expect = 7e-041
Identities = 369/463 (79%)
Strand = Plus / Plus
Query: 938 ctggagcaatcgctggaggtgttgctgctggtgctgcattggtttttgctgttccagcaa 997
|||||||||| |||||||| |||||||| |||||||| | | ||||| | || ||||
Sbjct: 946 ctggagcaatagctggaggagttgctgccggtgctgctctattatttgccgcacctgcaa 1005
Query: 998 ttgcatttgcaatgtggcgccgtcgtaaacctgaagagcatttcttcgatgttcctgccg 1057
||||||||||| |||||| || | ||||| |||| |||||| ||||||||||| |
Sbjct: 1006 ttgcatttgcatggtggcgtcgaaggaaaccacaagaatttttctttgatgttcctgctg 1065
Query: 1058 aggaggatccagaagttcatcttggtcagctcaaaaagttttcgttgcgggagcttcaag 1117
| |||||||| |||||||||||||| ||||| || | ||| || | || ||| | ||||
Sbjct: 1066 aagaggatcctgaagttcatcttgggcagcttaagaggttctcactccgagagttgcaag 1125
Query: 1118 ttgctactgatacttttagtaacaagcacattttaggaagaggtggttttggaaaagtgt 1177
|||| || |||||||| || || ||| ||||| | |||||||| || ||||| || ||||
Sbjct: 1126 ttgcaacagatactttcagcaataagaacattcttggaagaggagggtttggcaaggtgt 1185
Query: 1178 acaagggaaggcttgctgatggctcattggtagcagtgaaaagactaaaagaggagcgca 1237
|||| ||| | | ||||| || ||| |||| || || |||||| ||||||||||||| |
Sbjct: 1186 acaaaggacgtttggctgacggttcactggttgctgtcaaaagattaaaagaggagcgga 1245
Query: 1238 cacctggtggtgagcttcagtttcaaacagaggttgagatgattagcatggcagtgcaca 1297
|||||||||| |||||||||||||| || || || |||||||| |||||||| ||||| |
Sbjct: 1246 cacctggtggggagcttcagtttcagactgaagtagagatgatcagcatggctgtgcata 1305
Query: 1298 ggaaccttctccgacttcgtggtttctgcatgacacctactgaacggttgctggtctacc 1357
| || || ||||| | || || || || |||||||| || ||| |||| ||||| || |
Sbjct: 1306 gaaatctcctccgtttacgcgggttttgtatgacaccaaccgaaaggttactggtttatc 1365
Query: 1358 catacatggctaatggcagtgtggcatcacgtttacgagagcg 1400
| |||||||||||||| ||||| || || ||||| |||||||
Sbjct: 1366 cctacatggctaatggaagtgttgcctcctgtttaagagagcg 1408
Score = 71.9 bits (36), Expect = 2e-010
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 361 aatgtcttgcagagttgggattccactcttgttaatccatgtacatggtttcacgttacg 420
||||| ||||| ||||||||| | || ||||||||||| |||||||||||||| || ||
Sbjct: 369 aatgttttgcaaagttgggatcctacacttgttaatccttgtacatggtttcatgtaacc 428
Query: 421 tgtaacagcgataacagtgttatcagagttgaccttggaaatgc 464
|| |||| ||||| ||||| || |||||||| || ||||||||
Sbjct: 429 tgcaacaatgataatagtgtcataagagttgatctgggaaatgc 472
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1)
gene, complete cds
Length = 4206
Score = 228 bits (115), Expect = 1e-057
Identities = 286/343 (83%)
Strand = Plus / Plus
Query: 1451 tgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatcatccatc 1510
||||||| || || |||||||| || ||||||||||| || || || || ||||| ||||
Sbjct: 3375 tgggatcagctaggggtctttcatatttgcatgatcattgtgacccaaaaatcattcatc 3434
Query: 1511 gggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgtaggtgatt 1570
| || || |||||||| || || | |||||||| ||||||||||| || || || ||||
Sbjct: 3435 gtgacgtgaaagctgctaacatattgttggatgaagagtttgaggctgttgtgggggatt 3494
Query: 1571 tcgggcttgccaagcttatggactacaaggatacccatgtcacaactgctgttcgtggaa 1630
| || | || || |||||||| |||||||| |||||||| |||||||||||||| || |
Sbjct: 3495 ttggattggcaaaacttatggattacaaggacacccatgttacaactgctgttcggggta 3554
Query: 1631 caattggacacattgctcccgagtacctatccactggcaagtcctctgaaaagaccgatg 1690
||||||| || || ||||||||||||||||| ||||||||||| || || || || ||||
Sbjct: 3555 caattgggcatatagctcccgagtacctatctactggcaagtcttcagagaaaactgatg 3614
Query: 1691 tttttggatatgggatcatgcttctggagcttattactggacagagggcatttgatctag 1750
||||||| ||||| ||||||||||| |||||||| |||||||| || || ||||| || |
Sbjct: 3615 tttttggttatggtatcatgcttcttgagcttataactggacaaagagcttttgaccttg 3674
Query: 1751 ctcgtcttgcaaatgatgatgatgttatgcttcttgactgggt 1793
|||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 3675 ctcgacttgcgaatgatgatgatgttatgctgcttgattgggt 3717
Score = 135 bits (68), Expect = 2e-029
Identities = 257/320 (80%)
Strand = Plus / Plus
Query: 1060 gaggatccagaagttcatcttggtcagctcaaaaagttttcgttgcgggagcttcaagtt 1119
|||||||| |||||||||||||| ||||| || | ||| || | || ||| | ||||||
Sbjct: 2883 gaggatcctgaagttcatcttgggcagcttaagaggttctcactccgagagttgcaagtt 2942
Query: 1120 gctactgatacttttagtaacaagcacattttaggaagaggtggttttggaaaagtgtac 1179
|| || |||||||| || || ||| ||||| | |||||||| || ||||| || ||||||
Sbjct: 2943 gcaacagatactttcagcaataagaacattcttggaagaggagggtttggcaaggtgtac 3002
Query: 1180 aagggaaggcttgctgatggctcattggtagcagtgaaaagactaaaagaggagcgcaca 1239
|| ||| | | ||||| || ||| |||| || || |||||| ||||||||||||| |||
Sbjct: 3003 aaaggacgtttggctgacggttcactggttgctgtcaaaagattaaaagaggagcggaca 3062
Query: 1240 cctggtggtgagcttcagtttcaaacagaggttgagatgattagcatggcagtgcacagg 1299
|||||||| |||||||||||||| || || || |||||||| |||||||| ||||| ||
Sbjct: 3063 cctggtggggagcttcagtttcagactgaagtagagatgatcagcatggctgtgcataga 3122
Query: 1300 aaccttctccgacttcgtggtttctgcatgacacctactgaacggttgctggtctaccca 1359
|| || ||||| | || || || || |||||||| || ||| |||| ||||| || ||
Sbjct: 3123 aatctcctccgtttacgcgggttttgtatgacaccaaccgaaaggttactggtttatccc 3182
Query: 1360 tacatggctaatggcagtgt 1379
|||||||||||||| |||||
Sbjct: 3183 tacatggctaatggaagtgt 3202
Score = 58.0 bits (29), Expect = 3e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 361 aatgtcttgcagagttgggattccactcttgttaatccatgtacatggtttca 413
||||| ||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 892 aatgttttgcaaagttgggatcctacacttgttaatccttgtacatggtttca 944
>gb|CB892245.1|CB892245 EST649214 KV3 Medicago truncatula cDNA clone KV3-53L15, mRNA sequence
Length = 802
Score = 198 bits (100), Expect = 1e-048
Identities = 220/260 (84%)
Strand = Plus / Plus
Query: 1444 attgcactgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatc 1503
||||||||||||||||| ||||| ||| ||||||||||||||||||| || ||||||||
Sbjct: 529 attgcactgggatctgccagagggcttgcttacttgcatgatcactgtgaccctaagatt 588
Query: 1504 atccatcgggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgta 1563
|| ||||| ||||| |||||||||||||| | ||||||||||| ||||| ||||| ||
Sbjct: 589 attcatcgtgatgtgaaagctgcaaatatattgttggatgaggaatttgaagcagttgtg 648
Query: 1564 ggtgatttcgggcttgccaagcttatggactacaaggatacccatgtcacaactgctgtt 1623
|| |||||||| | || ||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 649 ggagatttcggtttagcaaagcttatggattacaaagatacccatgttactactgctgtc 708
Query: 1624 cgtggaacaattggacacattgctcccgagtacctatccactggcaagtcctctgaaaag 1683
||||| || |||||||| || || || |||||||| || ||||| ||||| || ||||||
Sbjct: 709 cgtggtacgattggacatatagcacctgagtacctgtcaactggaaagtcttcagaaaag 768
Query: 1684 accgatgtttttggatatgg 1703
|| |||| |||| |||||||
Sbjct: 769 actgatggtttttgatatgg 788
Score = 115 bits (58), Expect = 1e-023
Identities = 286/362 (79%)
Strand = Plus / Plus
Query: 1036 catttcttcgatgttcctgccgaggaggatccagaagttcatcttggtcagctcaaaaag 1095
|||||||| || |||||||| ||||||||||| |||||||| |||||||| || |||| |
Sbjct: 121 catttctttgacgttcctgctgaggaggatcccgaagttcaccttggtcaacttaaaagg 180
Query: 1096 ttttcgttgcgggagcttcaagttgctactgatacttttagtaacaagcacattttagga 1155
||||| | || ||||| | ||| || || |||| || |||||||| | ||| ||||
Sbjct: 181 ttttctctacgtgagctgctagtagcaacagataacttcagtaacaaaaatattctaggt 240
Query: 1156 agaggtggttttggaaaagtgtacaagggaaggcttgctgatggctcattggtagcagtg 1215
|||||||| || ||||| || || || ||| | | |||||| || || | ||||| ||
Sbjct: 241 agaggtggattcggaaaggtttataaaggacgcttggctgatagcacacttgtagctgta 300
Query: 1216 aaaagactaaaagaggagcgcacacctggtggtgagcttcagtttcaaacagaggttgag 1275
|| ||||| |||||||| || |||| ||||| ||||| || ||||||||||| || ||
Sbjct: 301 aagagacttaaagaggaacgtacacaaggtggggagctgcaatttcaaacagaagtggaa 360
Query: 1276 atgattagcatggcagtgcacaggaaccttctccgacttcgtggtttctgcatgacacct 1335
||||| || ||||| ||||| | || | || || |||||||| || ||||||||| ||
Sbjct: 361 atgatcagtatggctgtgcatcgtaatttgcttcggcttcgtggattttgcatgacatct 420
Query: 1336 actgaacggttgctggtctacccatacatggctaatggcagtgtggcatcacgtttacga 1395
|||||||| ||||| || || || |||||||| ||||| ||||| |||||| ||||||||
Sbjct: 421 actgaacgtttgcttgtgtatccttacatggccaatggaagtgtagcatcatgtttacga 480
Query: 1396 ga 1397
||
Sbjct: 481 ga 482
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 938 ctggagcaatcgctggaggtgttgctgctggtgctgcattggtttttgctgttccagcaa 997
||||||| || |||||||| ||||||||||||||||| || | ||||| | ||| ||||
Sbjct: 23 ctggagctattgctggaggagttgctgctggtgctgctctgttgtttgccgctcctgcaa 82
Query: 998 ttgcatttgc 1007
||||| ||||
Sbjct: 83 ttgcacttgc 92
>gb|BF520153.1|BF520153 EST457622 DSIL Medicago truncatula cDNA clone pDSIL-22D16, mRNA
sequence
Length = 650
Score = 190 bits (96), Expect = 3e-046
Identities = 186/216 (86%)
Strand = Plus / Plus
Query: 1617 tgctgttcgtggaacaattggacacattgctcccgagtacctatccactggcaagtcctc 1676
||||||||| || |||||||| || || ||||||||||||||||| ||||||||||| ||
Sbjct: 1 tgctgttcggggtacaattgggcatatagctcccgagtacctatctactggcaagtcttc 60
Query: 1677 tgaaaagaccgatgtttttggatatgggatcatgcttctggagcttattactggacagag 1736
|| || || ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||
Sbjct: 61 agagaaaactgatgtttttggttatggtatcatgcttcttgagcttataactggacaaag 120
Query: 1737 ggcatttgatctagctcgtcttgcaaatgatgatgatgttatgcttcttgactgggtgaa 1796
|| ||||| || ||||| ||||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 121 agcttttgaccttgctcgacttgcgaatgatgatgatgttatgctgcttgattgggtaaa 180
Query: 1797 aggactgctgaaggagaaaaaggtggagatgttggt 1832
|||||| ||||| ||||||||| | || ||||||||
Sbjct: 181 aggacttctgaaagagaaaaagcttgaaatgttggt 216
>gb|BG647340.1|BG647340 EST508959 HOGA Medicago truncatula cDNA clone pHOGA-16J11 5' end,
mRNA sequence
Length = 584
Score = 157 bits (79), Expect = 4e-036
Identities = 154/179 (86%)
Strand = Plus / Plus
Query: 1444 attgcactgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatc 1503
||||||||||||||||| ||||| ||| ||||||||||||||||||| || ||||||||
Sbjct: 352 attgcactgggatctgccagagggcttgcttacttgcatgatcactgtgaccctaagatt 411
Query: 1504 atccatcgggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgta 1563
|| ||||| ||||| |||||||||||||| | ||||||||||| ||||| ||||| ||
Sbjct: 412 attcatcgtgatgtgaaagctgcaaatatattgttggatgaggaatttgaagcagttgtg 471
Query: 1564 ggtgatttcgggcttgccaagcttatggactacaaggatacccatgtcacaactgctgt 1622
|| |||||||| | || ||||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 472 ggagatttcggtttagcaaagcttatggattacaaagatacccatgttactactgctgt 530
>gb|BQ255362.1|BQ255362 MTNAL79TKM KVKC Medicago truncatula cDNA clone pKVKC-12G7, mRNA
sequence
Length = 633
Score = 149 bits (75), Expect = 1e-033
Identities = 267/331 (80%)
Strand = Plus / Plus
Query: 1472 cttacttgcatgatcactgcgatcctaagatcatccatcgggatgtcaaagctgcaaata 1531
|||||||||||||||| || || |||||||| || ||||| ||||| |||||||||||||
Sbjct: 188 cttacttgcatgatcattgtgaccctaagattattcatcgtgatgtgaaagctgcaaata 247
Query: 1532 ttcttttggatgaggagtttgaggcagtcgtaggtgatttcgggcttgccaagcttatgg 1591
| | |||||||| || |||| ||||| || || |||||||| | || | ||||||||
Sbjct: 248 tattgttggatgatgaatttgtagcagttgttggagatttcggtttagcaaggcttatgg 307
Query: 1592 actacaaggatacccatgtcacaactgctgttcgtggaacaattggacacattgctcccg 1651
||||| |||||||||||||| |||||||||| || ||| |||| || || | || |
Sbjct: 308 cttacaaagatacccatgtcactactgctgttcaaggtacacttgggcatataccacctg 367
Query: 1652 agtacctatccactggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgc 1711
||||||| || || || ||||| || ||||||| ||||||||||||||||| | ||||
Sbjct: 368 agtacctgtcaaccggaaagtcttcataaaagactgatgtttttggatatggtacgatgc 427
Query: 1712 ttctggagcttattactggacagagggcatttgatctagctcgtcttgcaaatgatgatg 1771
|||| || || | |||||||||| ||| ||||| ||||| |||||||| ||||||||
Sbjct: 428 ttcttgaactgacaactggacagacggcttttgacctagcacgtcttgccggtgatgatg 487
Query: 1772 atgttatgcttcttgactgggtgaaaggact 1802
|||| ||| | ||||| ||||| ||||||||
Sbjct: 488 atgtgatgttgcttgattgggttaaaggact 518
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 1312 cttcgtggtttctgcatgacacctactgaacggttgctggtctacccatacatggctaat 1371
||||||||||| ||| | ||| |||||||||| ||||| || || || | |||||||||
Sbjct: 28 cttcgtggtttttgcgtaacatctactgaacgtttgcttgtgtatcctttaatggctaat 87
Query: 1372 ggcagtgtggcatcacgtttacgaga 1397
|| ||||| ||||| ||||||||||
Sbjct: 88 ggaagtgtagcatcgtgtttacgaga 113
>gb|BQ147240.1|BQ147240 NF038C06FL1F1050 Developing flower Medicago truncatula cDNA clone
NF038C06FL 5', mRNA sequence
Length = 640
Score = 141 bits (71), Expect = 2e-031
Identities = 143/167 (85%)
Strand = Plus / Plus
Query: 1666 ggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgcttctggagcttatt 1725
|||||||| || || || || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 9 ggcaagtcttcagagaaaactgatgtttttggttatggtatcatgcttcttgagcttata 68
Query: 1726 actggacagagggcatttgatctagctcgtcttgcaaatgatgatgatgttatgcttctt 1785
|||||||| || || ||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 69 actggacaaagagcttttgaccttgctcgacttgcgaatgatgatgatgttatgctgctt 128
Query: 1786 gactgggtgaaaggactgctgaaggagaaaaaggtggagatgttggt 1832
|| ||||| |||||||| ||||| ||||||||| | || ||||||||
Sbjct: 129 gattgggtaaaaggacttctgaaagagaaaaagcttgaaatgttggt 175
>gb|CB894219.1|CB894219 EST647011 HOGA Medicago truncatula cDNA clone HOGA-30O22, mRNA
sequence
Length = 718
Score = 139 bits (70), Expect = 1e-030
Identities = 145/170 (85%)
Strand = Plus / Plus
Query: 1633 attggacacattgctcccgagtacctatccactggcaagtcctctgaaaagaccgatgtt 1692
|||||||| || || || |||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 4 attggacatatagcacctgagtacctgtcaactggaaagtcttcagaaaagactgatgtt 63
Query: 1693 tttggatatgggatcatgcttctggagcttattactggacagagggcatttgatctagct 1752
||||||||||| | |||||||| || || || |||||||| ||||| |||||||||||
Sbjct: 64 tttggatatggtgtgatgcttcttgaactaataactggacaaagggcttttgatctagca 123
Query: 1753 cgtcttgcaaatgatgatgatgttatgcttcttgactgggtgaaaggact 1802
|||||||| |||||||||||||||||| | ||||| ||||| ||||||||
Sbjct: 124 cgtcttgccaatgatgatgatgttatgttgcttgattgggttaaaggact 173
>gb|CL314504.1|CL314504 mth2-131O17_T7 Medicago truncatula BAC end sequences Medicago
truncatula genomic 5', DNA sequence
Length = 674
Score = 119 bits (60), Expect = 9e-025
Identities = 113/131 (86%)
Strand = Plus / Minus
Query: 1444 attgcactgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatc 1503
||||||||||||||||| ||||| ||| ||||||||||||||||||| || ||||||||
Sbjct: 138 attgcactgggatctgccagagggcttgcttacttgcatgatcactgtgaccctaagatt 79
Query: 1504 atccatcgggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgta 1563
|| ||||| ||||| |||||||||||||| | ||||||||||| ||||| |||| ||
Sbjct: 78 attcatcgtgatgtgaaagctgcaaatatattgttggatgaggaatttgaagcagntgtg 19
Query: 1564 ggtgatttcgg 1574
|| ||||||||
Sbjct: 18 ggagatttcgg 8
>gb|AW689066.1|AW689066 NF015A05ST1F1000 Developing stem Medicago truncatula cDNA clone
NF015A05ST 5', mRNA sequence
Length = 646
Score = 99.6 bits (50), Expect = 9e-019
Identities = 258/325 (79%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 938 ctggagcaatcgctggaggtgttgctgctggtgctgcattggtttttgctgttccagcaa 997
|||||||||| |||||||| |||||||| |||||||| | | ||||| | || ||||
Sbjct: 270 ctggagcaatagctggaggagttgctgccggtgctgctctattatttgccgcacctgcaa 329
Query: 998 ttgcatttgcaatgtggcgccgtcgtaaacctgaagagcatttcttcgatgttcctgccg 1057
||||||||||| |||||| || | ||||| |||| |||||| ||||||||||| |
Sbjct: 330 ttgcatttgcatggtggcgtcgaaggaaaccacaagaatttttctttgatgttcctgctg 389
Query: 1058 aggaggatccagaagttcatcttggtcagctcaaaaagttttcgttgcgggagcttcaag 1117
| |||||||| |||||||||||||| ||||| || | ||| || | || ||| | ||||
Sbjct: 390 aagaggatcctgaagttcatcttgggcagcttaagaggttctcactccgagagttgcaag 449
Query: 1118 ttgctactgatacttttagtaacaagcacattttaggaagaggtggttttggaaaagtgt 1177
|||| || |||||||| || || ||| ||||| | |||||||| || ||||| || ||||
Sbjct: 450 ttgcaacagatactttcagcaataagaacattcttggaagaggagggtttggcaaggtgt 509
Query: 1178 acaagggaaggcttgctgatggctcattggtagcagtgaaaagact-aaaagaggagcgc 1236
|||| ||| | | ||||| || ||| |||| || || |||||| | ||||||||||||
Sbjct: 510 acaaaggacgtttggctgacggttcactggttgctgtcaaaagattaaaaagaggagcgg 569
Query: 1237 acacctgg-tggtgagcttcagttt 1260
|||||||| ||| |||||||| |||
Sbjct: 570 acacctggntggggagcttcanttt 594
>gb|CX535105.1|CX535105 s13dNF84B03MJ029_388388 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 646
Score = 93.7 bits (47), Expect = 5e-017
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 1708 atgcttctggagcttattactggacagagggcatttgatctagctcgtcttgcaaatgat 1767
|||||||| || || || |||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 9 atgcttcttgaactaataactggacaaagggcttttgatctagcacgtcttgccaatgat 68
Query: 1768 gatgatgttatgcttcttgactgggtgaaaggact 1802
|||||||||||| | ||||| ||||| ||||||||
Sbjct: 69 gatgatgttatgttgcttgattgggttaaaggact 103
>gb|CG953747.1|CG953747 MBELN16TF mth2 Medicago truncatula genomic clone 81C8, DNA sequence
Length = 915
Score = 79.8 bits (40), Expect = 8e-013
Identities = 265/340 (77%)
Strand = Plus / Minus
Query: 1057 gaggaggatccagaagttcatcttggtcagctcaaaaagttttcgttgcgggagcttcaa 1116
||||||||||| |||||||| ||||||||||| |||| ||||||| |||| ||||| | |
Sbjct: 877 gaggaggatcctgaagttcaccttggtcagcttaaaaggttttcgctgcgtgagctgcta 818
Query: 1117 gttgctactgatacttttagtaacaagcacattttaggaagaggtggttttggaaaagtg 1176
|| || || |||| || || ||| | ||||| |||| |||||||| || ||||| ||
Sbjct: 817 gtagcaacagataacttcagcaacgaaaacattctaggtagaggtggattcggaaaggtt 758
Query: 1177 tacaagggaaggcttgctgatggctcattggtagcagtgaaaagactaaaagaggagcgc 1236
||||| ||| | | ||||| || | | |||||||| |||||||| |||||||| |||
Sbjct: 757 tacaaaggacgcttagctgacggtactcttgtagcagtaaaaagacttaaagaggaacgc 698
Query: 1237 acacctggtggtgagcttcagtttcaaacagaggttgagatgattagcatggcagtgcac 1296
||| ||||| ||||| || || || ||||| || || || || |||||||| |||||
Sbjct: 697 gcacaaggtggggagctgcaattccagacagaagtggaaataatcagcatggctgtgcat 638
Query: 1297 aggaaccttctccgacttcgtggtttctgcatgacacctactgaacggttgctggtctac 1356
| || | || || ||||||||||| ||||||||| | || ||||| ||||| || ||
Sbjct: 637 cgtaatttgcttcggcttcgtggtttttgcatgacatccaccgaacgtttgctcgtgtat 578
Query: 1357 ccatacatggctaatggcagtgtggcatcacgtttacgag 1396
|| | |||| |||||| ||||| |||||| |||||||||
Sbjct: 577 cctttaatggttaatggaagtgtagcatcaagtttacgag 538
Score = 77.8 bits (39), Expect = 3e-012
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 1444 attgcactgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatc 1503
||||| |||||| |||| || || ||| |||||||||||||||| || || ||||||||
Sbjct: 143 attgcgctgggagctgccagggggcttgcttacttgcatgatcattgtgaccctaagatt 84
Query: 1504 atccatcgggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgta 1563
|| ||||| ||||| ||||| || ||||| | ||||||||||| ||||| ||||| ||
Sbjct: 83 attcatcgtgatgtgaaagcagcgaatatattgttggatgaggaatttgaagcagttgtt 24
Query: 1564 ggtgatttcgg 1574
|| ||||||||
Sbjct: 23 ggagatttcgg 13
>gb|BH001076.1|BH001076 T122530b Medicago truncatula BAC library Medicago truncatula genomic
clone 081C08, DNA sequence
Length = 521
Score = 77.8 bits (39), Expect = 3e-012
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 1444 attgcactgggatctgcaagaggtctttcttacttgcatgatcactgcgatcctaagatc 1503
||||| |||||| |||| || || ||| |||||||||||||||| || || ||||||||
Sbjct: 144 attgcgctgggagctgccagggggcttgcttacttgcatgatcattgtgaccctaagatt 85
Query: 1504 atccatcgggatgtcaaagctgcaaatattcttttggatgaggagtttgaggcagtcgta 1563
|| ||||| ||||| ||||| || ||||| | ||||||||||| ||||| ||||| ||
Sbjct: 84 attcatcgtgatgtgaaagcagcgaatatattgttggatgaggaatttgaagcagttgtt 25
Query: 1564 ggtgatttcgg 1574
|| ||||||||
Sbjct: 24 ggagatttcgg 14
>gb|BF004020.1|BF004020 EST432518 KV1 Medicago truncatula cDNA clone pKV1-14I4, mRNA sequence
Length = 855
Score = 73.8 bits (37), Expect = 5e-011
Identities = 103/125 (82%)
Strand = Plus / Plus
Query: 1600 gatacccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtaccta 1659
||||||||||| || ||||| || ||||| || ||||| ||||||||||| |||||||||
Sbjct: 635 gatacccatgtgaccactgccgtgcgtggcaccattggtcacattgctccggagtaccta 694
Query: 1660 tccactggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgcttctggag 1719
||||| || |||| || |||||||| || || ||||| ||||| ||| || | || |||
Sbjct: 695 tccaccggtcagtcttcagaaaagactgacgtgtttgggtatggaatcttgttgcttgag 754
Query: 1720 cttat 1724
|||||
Sbjct: 755 cttat 759
Score = 54.0 bits (27), Expect = 5e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1145 acattttaggaagaggtggttttggaaaagtgtacaagg 1183
||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 180 acattctaggaagaggtggttttggaatagtttacaagg 218
>gb|CA923216.1|CA923216 EST640934 MTUS Medicago truncatula cDNA clone MTUS-64G5, mRNA
sequence
Length = 785
Score = 73.8 bits (37), Expect = 5e-011
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 1600 gatacccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtaccta 1659
||||||||||| || ||||| || ||||| || ||||| ||||||||||| |||||||||
Sbjct: 584 gatacccatgtgaccactgccgtgcgtggcaccattggtcacattgctccggagtaccta 525
Query: 1660 tccactggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgcttctggag 1719
||||| || |||| || |||||||| || || ||||| ||||| ||| || | || |||
Sbjct: 524 tccaccggtcagtcttcagaaaagactgacgtgtttgggtatggaatcttgttgcttgag 465
Query: 1720 cttat 1724
|||||
Sbjct: 464 cttat 460
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE
Length = 128654
Score = 73.8 bits (37), Expect = 5e-011
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 1600 gatacccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtaccta 1659
||||||||||| || ||||| || ||||| || ||||| ||||||||||| |||||||||
Sbjct: 126759 gatacccatgtgaccactgccgtgcgtggcaccattggtcacattgctccggagtaccta 126700
Query: 1660 tccactggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgcttctggag 1719
||||| || |||| || |||||||| || || ||||| ||||| ||| || | || |||
Sbjct: 126699 tccaccggtcagtcttcagaaaagactgacgtgtttgggtatggaatcttgttgcttgag 126640
Query: 1720 cttat 1724
|||||
Sbjct: 126639 cttat 126635
Score = 54.0 bits (27), Expect = 5e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1145 acattttaggaagaggtggttttggaaaagtgtacaagg 1183
||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 127764 acattctaggaagaggtggttttggaatagtttacaagg 127726
>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE
Length = 122251
Score = 73.8 bits (37), Expect = 5e-011
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 1600 gatacccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtaccta 1659
||||||||||| || ||||| || ||||| || ||||| ||||||||||| |||||||||
Sbjct: 16547 gatacccatgtgaccactgccgtgcgtggcaccattggtcacattgctccggagtaccta 16488
Query: 1660 tccactggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgcttctggag 1719
||||| || |||| || |||||||| || || ||||| ||||| ||| || | || |||
Sbjct: 16487 tccaccggtcagtcttcagaaaagactgacgtgtttgggtatggaatcttgttgcttgag 16428
Query: 1720 cttat 1724
|||||
Sbjct: 16427 cttat 16423
Score = 54.0 bits (27), Expect = 5e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1145 acattttaggaagaggtggttttggaaaagtgtacaagg 1183
||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 17552 acattctaggaagaggtggttttggaatagtttacaagg 17514
>gb|AW773590.1|AW773590 EST332576 KV3 Medicago truncatula cDNA clone pKV3-15A11, mRNA
sequence
Length = 556
Score = 71.9 bits (36), Expect = 2e-010
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 361 aatgtcttgcagagttgggattccactcttgttaatccatgtacatggtttcacgttacg 420
||||| ||||| ||||||||| | || ||||||||||| |||||||||||||| || ||
Sbjct: 299 aatgttttgcaaagttgggatcctacacttgttaatccttgtacatggtttcatgtaacc 358
Query: 421 tgtaacagcgataacagtgttatcagagttgaccttggaaatgc 464
|| |||| ||||| ||||| || |||||||| || ||||||||
Sbjct: 359 tgcaacaatgataatagtgtcataagagttgatctgggaaatgc 402
>gb|CX527768.1|CX527768 s13dNF47B09AT077_516048 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 622
Score = 71.9 bits (36), Expect = 2e-010
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 361 aatgtcttgcagagttgggattccactcttgttaatccatgtacatggtttcacgttacg 420
||||| ||||| ||||||||| | || ||||||||||| |||||||||||||| || ||
Sbjct: 354 aatgttttgcaaagttgggatcctacacttgttaatccttgtacatggtttcatgtaacc 413
Query: 421 tgtaacagcgataacagtgttatcagagttgaccttggaaatgc 464
|| |||| ||||| ||||| || |||||||| || ||||||||
Sbjct: 414 tgcaacaatgataatagtgtcataagagttgatctgggaaatgc 457
>gb|AW688532.2|AW688532 NF008F10ST1F1000 Developing stem Medicago truncatula cDNA clone
NF008F10ST 5', mRNA sequence
Length = 783
Score = 65.9 bits (33), Expect = 1e-008
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 1600 gatacccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtaccta 1659
||||||||||| | ||||| || ||||| || ||||| ||||||||||| |||||||||
Sbjct: 720 gatacccatgtgcccactgccgtgcgtggcaccattggtcacattgctccggagtaccta 661
Query: 1660 tccactggcaagtcctctgaaaagaccgatgtttttggatatgggatcatgcttctggag 1719
||||| || |||| || |||||||| || || ||||| ||||| ||| || | || |||
Sbjct: 660 tccaccggtcagtcttcagaaaagactgacgtgtttgggtatggaatcttgttgcttgag 601
Query: 1720 cttat 1724
|||||
Sbjct: 600 cttat 596
>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence
Length = 129102
Score = 60.0 bits (30), Expect = 7e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 1606 catgtcacaactgctgttcgtggaacaattggacacattgctcccgagtacctatccact 1665
|||||||| |||||||| ||||| || ||||||||||||| || |||||||| || |||
Sbjct: 101970 catgtcaccactgctgtacgtggcactgttggacacattgcaccggagtacctctcgact 102029
Query: 1666 ggcaagtcctctgaaaagaccgatgtttttggat 1699
||| | || ||||| || || ||||| |||||||
Sbjct: 102030 ggccaatcatctgagaaaactgatgtgtttggat 102063
Score = 44.1 bits (22), Expect = 0.043
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1255 cagtttcaaacagaggttgagatgattagcatggcagtgcac 1296
||||| |||||||| | |||||||||||| |||||||||||
Sbjct: 100963 cagttccaaacagaattggagatgattagcttggcagtgcac 101004
>emb|CR324716.1| mte1-52A5RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 580
Score = 56.0 bits (28), Expect = 1e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 1604 cccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtacctatcca 1663
|||||||||| |||||||| ||||| || ||||||||||||| || ||||||| || |
Sbjct: 389 cccatgtcaccactgctgtacgtggcactgttggacacattgcaccgaagtacctctcga 330
Query: 1664 ctggcaagtcctctgaaaagaccgatgtttttggat 1699
||||| | || ||||| || || ||||| |||||||
Sbjct: 329 ctggccaatcatctgagaaaactgatgtgtttggat 294
>gb|CX534553.1|CX534553 s13dNF47G08MJ068_330813 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 679
Score = 56.0 bits (28), Expect = 1e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 1604 cccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtacctatcca 1663
|||||||||| |||||||| ||||| || ||||||||||||| || ||||||| || |
Sbjct: 322 cccatgtcaccactgctgtacgtggcactgttggacacattgcaccgaagtacctctcga 263
Query: 1664 ctggcaagtcctctgaaaagaccgatgtttttggat 1699
||||| | || ||||| || || ||||| |||||||
Sbjct: 262 ctggccaatcatctgagaaaactgatgtgtttggat 227
>gb|AC144389.22| Medicago truncatula clone mth2-25e14, complete sequence
Length = 127170
Score = 56.0 bits (28), Expect = 1e-005
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 1604 cccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtacctatcca 1663
|||||||||| |||||||| ||||| || ||||||||||||| || ||||||| || |
Sbjct: 108276 cccatgtcaccactgctgtacgtggcactgttggacacattgcaccgaagtacctctcga 108335
Query: 1664 ctggcaagtcctctgaaaagaccgatgtttttggat 1699
||||| | || ||||| || || ||||| |||||||
Sbjct: 108336 ctggccaatcatctgagaaaactgatgtgtttggat 108371
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete
sequence
Length = 132097
Score = 56.0 bits (28), Expect = 1e-005
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 1604 cccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtacctatcca 1663
|||||||||| |||||||| ||||| || ||||||||||||| || ||||||| || |
Sbjct: 2423 cccatgtcaccactgctgtacgtggcactgttggacacattgcaccgaagtacctctcga 2482
Query: 1664 ctggcaagtcctctgaaaagaccgatgtttttggat 1699
||||| | || ||||| || || ||||| |||||||
Sbjct: 2483 ctggccaatcatctgagaaaactgatgtgtttggat 2518
>gb|AC140670.6| Medicago truncatula clone mth2-10o11, WORKING DRAFT SEQUENCE
Length = 120670
Score = 56.0 bits (28), Expect = 1e-005
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 1604 cccatgtcacaactgctgttcgtggaacaattggacacattgctcccgagtacctatcca 1663
|||||||||| |||||||| ||||| || ||||||||||||| || ||||||| || |
Sbjct: 41821 cccatgtcaccactgctgtacgtggcactgttggacacattgcaccaaagtacctctcga 41880
Query: 1664 ctggcaagtcctctgaaaagaccgatgtttttggat 1699
||||| | || ||||| || || ||||| |||||||
Sbjct: 41881 ctggccaatcatctgagaaaactgatgtgtttggat 41916
>emb|CR304774.1| mte1-24M5RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 610
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 938 ctggagcaatcgctggaggtgttgctgctggtgctgcattggtttttgctgttccagcaa 997
||||||| || |||||||| ||||||||||||||||| || | ||||| | ||| ||||
Sbjct: 444 ctggagctattgctggaggagttgctgctggtgctgctctgttgtttgccgctcctgcaa 503
Query: 998 ttgcatttgc 1007
||||| ||||
Sbjct: 504 ttgcacttgc 513
>gb|AW573907.1|AW573907 EST316498 GVN Medicago truncatula cDNA clone pGVN-49B16, mRNA
sequence
Length = 427
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 137 aggtggttttggtaaagtttacaagggatggcttg 171
>gb|BF638206.1|BF638206 NF045B06PL1F1047 Phosphate starved leaf Medicago truncatula cDNA
clone NF045B06PL 5', mRNA sequence
Length = 643
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 486 aggtggttttggtaaagtttacaagggatggcttg 520
>gb|BF649190.1|BF649190 NF056E03EC1F1021 Elicited cell culture Medicago truncatula cDNA clone
NF056E03EC 5', mRNA sequence
Length = 632
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 465 aggtggttttggtaaagtttacaagggatggcttg 499
>gb|BF649886.1|BF649886 NF085C09EC1F1068 Elicited cell culture Medicago truncatula cDNA clone
NF085C09EC 5', mRNA sequence
Length = 645
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 197 aggtggttttggtaaagtttacaagggatggcttg 231
>gb|BG645064.1|BG645064 EST506683 KV3 Medicago truncatula cDNA clone pKV3-39I23 5' end, mRNA
sequence
Length = 744
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 482 aggtggttttggtaaagtttacaagggatggcttg 516
>gb|BG647967.1|BG647967 EST509586 HOGA Medicago truncatula cDNA clone pHOGA-18M8 5' end, mRNA
sequence
Length = 799
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 608 aggtggttttggtaaagtttacaagggatggcttg 642
>gb|CA917424.1|CA917424 EST641571 GPOD Medicago truncatula cDNA clone GPOD-36I17, mRNA
sequence
Length = 810
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 440 aggtggttttggtaaagtttacaagggatggcttg 474
>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE
Length = 124859
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1158 aggtggttttggaaaagtgtacaagggaaggcttg 1192
|||||||||||| ||||| ||||||||| ||||||
Sbjct: 77788 aggtggttttggtaaagtttacaagggatggcttg 77822
>gb|CG941992.1|CG941992 MBEFJ74TF mth2 Medicago truncatula genomic clone 44M4, DNA sequence
Length = 313
Score = 44.1 bits (22), Expect = 0.043
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1492 gatcctaagatcatccatcgggatgtcaaagctgcaaa 1529
||||| ||||| |||||| ||||||| |||||||||||
Sbjct: 46 gatccgaagataatccatagggatgtaaaagctgcaaa 9
>gb|AW328935.2|AW328935 N200127e rootphos(-) Medicago truncatula cDNA clone MHRP-14D5, mRNA
sequence
Length = 592
Score = 44.1 bits (22), Expect = 0.043
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1566 tgatttcgggcttgccaagctt 1587
||||||||||||||||||||||
Sbjct: 37 tgatttcgggcttgccaagctt 58
>gb|AL389838.1|AL389838 MtBC57G06F1 MtBC Medicago truncatula cDNA clone MtBC57G06 T3, mRNA
sequence
Length = 509
Score = 44.1 bits (22), Expect = 0.043
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1492 gatcctaagatcatccatcgggatgtcaaagctgcaaa 1529
||||| ||||| |||||| ||||||| |||||||||||
Sbjct: 95 gatccgaagataatccatagggatgtaaaagctgcaaa 132
>gb|BF520845.1|BF520845 EST458318 DSIL Medicago truncatula cDNA clone pDSIL-39H5, mRNA
sequence
Length = 568
Score = 44.1 bits (22), Expect = 0.043
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1492 gatcctaagatcatccatcgggatgtcaaagctgcaaa 1529
||||| ||||| |||||| ||||||| |||||||||||
Sbjct: 435 gatccgaagataatccatagggatgtaaaagctgcaaa 472
>gb|CB893635.1|CB893635 EST646427 HOGA Medicago truncatula cDNA clone HOGA-28D23, mRNA
sequence
Length = 117
Score = 44.1 bits (22), Expect = 0.043
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1159 ggtggttttggaaaagtgtacaagggaaggcttg 1192
||||||||||| ||||| ||||||||| ||||||
Sbjct: 59 ggtggttttggtaaagtttacaagggatggcttg 92
>gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete sequence
Length = 124043
Score = 44.1 bits (22), Expect = 0.043
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1678 gaaaagaccgatgtttttggatatgg 1703
|||||||| |||||||||||||||||
Sbjct: 18731 gaaaagacagatgtttttggatatgg 18756
>gb|AC163384.3| Medicago truncatula chromosome 7 clone mth2-50m11, *** SEQUENCING IN
PROGRESS ***, 3 ordered pieces
Length = 127263
Score = 44.1 bits (22), Expect = 0.043
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1566 tgatttcgggcttgccaagctt 1587
||||||||||||||||||||||
Sbjct: 102153 tgatttcgggcttgccaagctt 102132
>gb|AC174314.2| Medicago truncatula clone mth2-160p14, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 98154
Score = 44.1 bits (22), Expect = 0.043
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1678 gaaaagaccgatgtttttggatatgg 1703
|||||||| |||||||||||||||||
Sbjct: 38254 gaaaagacagatgtttttggatatgg 38229
>gb|CG938592.1|CG938592 MBEIP81TF mth2 Medicago truncatula genomic clone 63N18, DNA sequence
Length = 866
Score = 42.1 bits (21), Expect = 0.17
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1566 tgatttcgggcttgccaagct 1586
|||||||||||||||||||||
Sbjct: 21 tgatttcgggcttgccaagct 1
>gb|BF519919.1|BF519919 EST457385 DSIL Medicago truncatula cDNA clone pDSIL-22G23, mRNA
sequence
Length = 406
Score = 42.1 bits (21), Expect = 0.17
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 391 gttaatccatgtacatggtttcacgttac 419
|||||||||||||| |||||||| |||||
Sbjct: 201 gttaatccatgtacttggtttcatgttac 229
>gb|BF643238.1|BF643238 NF002H05EC1F1045 Elicited cell culture Medicago truncatula cDNA clone
NF002H05EC 5', mRNA sequence
Length = 585
Score = 42.1 bits (21), Expect = 0.17
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1492 gatcctaagatcatccatcgggatgtcaaagctgcaaatat 1532
||||| ||||| |||||| | ||||| ||||||||||||||
Sbjct: 365 gatccaaagataatccatagagatgtgaaagctgcaaatat 405
>gb|BF645214.1|BF645214 NF032F11EC1F1094 Elicited cell culture Medicago truncatula cDNA
clone NF032F11EC 5', mRNA sequence
Length = 650
Score = 42.1 bits (21), Expect = 0.17
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 391 gttaatccatgtacatggtttcacgttac 419
|||||||||||||| |||||||| |||||
Sbjct: 189 gttaatccatgtacttggtttcatgttac 217
>gb|BF645884.1|BF645884 NF032C10EC1F1081 Elicited cell culture Medicago truncatula cDNA
clone NF032C10EC 5', mRNA sequence
Length = 663
Score = 42.1 bits (21), Expect = 0.17
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 391 gttaatccatgtacatggtttcacgttac 419
|||||||||||||| |||||||| |||||
Sbjct: 100 gttaatccatgtacttggtttcatgttac 128
>gb|BF647243.1|BF647243 NF110A01EC1F1003 Elicited cell culture Medicago truncatula cDNA
clone NF110A01EC 5', mRNA sequence
Length = 431
Score = 42.1 bits (21), Expect = 0.17
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 391 gttaatccatgtacatggtttcacgttac 419
|||||||||||||| |||||||| |||||
Sbjct: 236 gttaatccatgtacttggtttcatgttac 264
>gb|BF647244.1|BF647244 NF065H08EC1F1075 Elicited cell culture Medicago truncatula cDNA
clone NF065H08EC 5', mRNA sequence
Length = 671
Score = 42.1 bits (21), Expect = 0.17
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 391 gttaatccatgtacatggtttcacgttac 419
|||||||||||||| |||||||| |||||
Sbjct: 285 gttaatccatgtacttggtttcatgttac 313
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 424,298
Number of Sequences: 392609
Number of extensions: 424298
Number of successful extensions: 33895
Number of sequences better than 0.5: 61
Number of HSP's better than 0.5 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33710
Number of HSP's gapped (non-prelim): 177
length of query: 1916
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1896
effective length of database: 433,880,813
effective search space: 822638021448
effective search space used: 822638021448
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)