BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4CL
(1986 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula c... 46 0.011
gb|AW329105.2|AW329105 N200312e rootphos(-) Medicago trunca... 46 0.011
gb|BF005505.1|BF005505 EST434003 DSLC Medicago truncatula c... 46 0.011
gb|AW687347.2|AW687347 NF008F06RT1F1058 Developing root Med... 46 0.011
gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula c... 46 0.011
emb|CR478073.1| mth2-187F21FM1 BAC end, cultivar Jemalong A... 42 0.18
emb|CR485975.1| mth2-155K15RM2 BAC end, cultivar Jemalong A... 42 0.18
emb|CR501970.1| mth2-144P2RM1 BAC end, cultivar Jemalong A1... 42 0.18
gb|AA660679.1|AA660679 00568 MtRHE Medicago truncatula cDNA... 42 0.18
gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Med... 42 0.18
gb|AW329421.2|AW329421 N200656e rootphos(-) Medicago trunca... 42 0.18
gb|BF634495.1|BF634495 NF062B09DT1F1076 Drought Medicago tr... 42 0.18
gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cD... 42 0.18
gb|CA917753.1|CA917753 EST641900 GPOD Medicago truncatula c... 42 0.18
gb|CA917856.1|CA917856 EST642003 GPOD Medicago truncatula c... 42 0.18
gb|CB892185.1|CB892185 EST649154 KV3 Medicago truncatula cD... 42 0.18
gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula c... 42 0.18
gb|AC144503.17| Medicago truncatula clone mth2-13f22, compl... 42 0.18
emb|CR931733.2| Medicago truncatula chromosome 5 clone mth... 42 0.18
gb|CG930963.1|CG930963 MBEEP62TRB mth2 Medicago truncatula ... 40 0.70
emb|CR331204.1| mte1-60C8RM1 BAC end, cultivar Jemalong A17... 40 0.70
emb|CR342524.1| mte1-75E14RM1 BAC end, cultivar Jemalong A1... 40 0.70
emb|CR312420.1| mte1-35A7RM1 BAC end, cultivar Jemalong A17... 40 0.70
gb|BF633805.1|BF633805 NF065F12DT1F1103 Drought Medicago tr... 40 0.70
emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2... 40 0.70
gb|CG932719.1|CG932719 MBEBA78TR mth2 Medicago truncatula g... 38 2.8
gb|CG962326.1|CG962326 MBEFF74TF mth2 Medicago truncatula g... 38 2.8
emb|CR336217.1| mte1-67O7FM1 BAC end, cultivar Jemalong A17... 38 2.8
emb|CR481270.1| mth2-193J11RM1 BAC end, cultivar Jemalong A... 38 2.8
emb|CR306313.1| mte1-26H21RM1 BAC end, cultivar Jemalong A1... 38 2.8
emb|CR512623.1| mth4-37G2RM1 BAC end, cultivar Jemalong A17... 38 2.8
gb|AW694598.1|AW694598 NF078B11ST1F1092 Developing stem Med... 38 2.8
gb|AW694707.1|AW694707 NF079C07ST1F1053 Developing stem Med... 38 2.8
gb|BF641220.1|BF641220 NF062B11IN1F1092 Insect herbivory Me... 38 2.8
gb|BF642398.1|BF642398 NF056C01IN1F1004 Insect herbivory Me... 38 2.8
gb|AW685678.2|AW685678 NF033E07NR1F1000 Nodulated root Medi... 38 2.8
gb|BE325266.2|BE325266 NF119C06ST1F1049 Developing stem Med... 38 2.8
gb|BE321878.2|BE321878 NF045G10IN1F1081 Insect herbivory Me... 38 2.8
gb|BE322756.2|BE322756 NF047C08IN1F1055 Insect herbivory Me... 38 2.8
gb|BG449107.1|BG449107 NF005A05IN1F1037 Insect herbivory Me... 38 2.8
gb|BG449356.1|BG449356 NF046G10IN1F1082 Insect herbivory Me... 38 2.8
gb|BG449462.1|BG449462 NF046F08IN1F1073 Insect herbivory Me... 38 2.8
gb|BG455339.1|BG455339 NF046H07PL1F1062 Phosphate starved l... 38 2.8
gb|BI265960.1|BI265960 NF094C04IN1F1034 Insect herbivory Me... 38 2.8
gb|BI270562.1|BI270562 NF010C09FL1F1070 Developing flower M... 38 2.8
gb|CA917599.1|CA917599 EST641746 GPOD Medicago truncatula c... 38 2.8
gb|CX524523.1|CX524523 s13dNF07A04AT021_448390 Aphid-Infect... 38 2.8
gb|CX524699.1|CX524699 s13dNF10A11AT085_478032 Aphid-Infect... 38 2.8
gb|CX525276.1|CX525276 s13dNF16D11AT094_479186 Aphid-Infect... 38 2.8
gb|CX526844.1|CX526844 s13dNF27C04AT034_514200 Aphid-Infect... 38 2.8
gb|CX527151.1|CX527151 s13dNF40E06AT051_514814 Aphid-Infect... 38 2.8
gb|CX527307.1|CX527307 s13dNF42B12AT101_515126 Aphid-Infect... 38 2.8
gb|AC124970.21| Medicago truncatula clone mth2-7j19, comple... 38 2.8
gb|AC134822.19| Medicago truncatula clone mth2-15j20, compl... 38 2.8
gb|AC157983.16| Medicago truncatula clone mth2-130n5, compl... 38 2.8
>gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula cDNA clone pDSIR-30H13, mRNA
sequence
Length = 655
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcaggcccggt 1196
|||||||| || || ||||||||||||||||||||
Sbjct: 172 ggacaggggtacggtatgacagaggcaggcccggt 206
>gb|AW329105.2|AW329105 N200312e rootphos(-) Medicago truncatula cDNA clone MHRP-16C12, mRNA
sequence
Length = 457
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcaggcccggt 1196
|||||||| || || ||||||||||||||||||||
Sbjct: 47 ggacaggggtacggtatgacagaggcaggcccggt 81
>gb|BF005505.1|BF005505 EST434003 DSLC Medicago truncatula cDNA clone pDSLC-37L17, mRNA
sequence
Length = 394
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1156 gtgctcggacagggttatgggatgacagaggcagg 1190
||||| |||||||| ||||| ||||||||||||||
Sbjct: 213 gtgcttggacagggatatggaatgacagaggcagg 247
>gb|AW687347.2|AW687347 NF008F06RT1F1058 Developing root Medicago truncatula cDNA clone
NF008F06RT 5', mRNA sequence
Length = 542
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcaggcccggt 1196
|||||||| || || ||||||||||||||||||||
Sbjct: 44 ggacaggggtacggtatgacagaggcaggcccggt 78
>gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula cDNA clone pKVKC-9C6, mRNA
sequence
Length = 699
Score = 46.1 bits (23), Expect = 0.011
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcaggcccggt 1196
|||||||| || || ||||||||||||||||||||
Sbjct: 168 ggacaggggtacggtatgacagaggcaggcccggt 202
>emb|CR478073.1| mth2-187F21FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 450
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 234 ggacagggttatgggatgactgaagcagg 262
>emb|CR485975.1| mth2-155K15RM2 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 584
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 233 ggacagggttatgggatgactgaagcagg 261
>emb|CR501970.1| mth2-144P2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 698
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 233 ggacagggttatgggatgactgaagcagg 261
>gb|AA660679.1|AA660679 00568 MtRHE Medicago truncatula cDNA 5' similar to 4-coumarate-CoA
ligase, mRNA sequence
Length = 645
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 131 ggacagggttatgggatgactgaagcagg 159
>gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Medicago truncatula cDNA clone
NF041C08ST 5', mRNA sequence
Length = 656
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||| ||||| ||||||||||||||
Sbjct: 69 ggacagggatatggaatgacagaggcagg 97
>gb|AW329421.2|AW329421 N200656e rootphos(-) Medicago truncatula cDNA clone MHRP-19H8, mRNA
sequence
Length = 590
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 180 ggacagggttatgggatgactgaagcagg 208
>gb|BF634495.1|BF634495 NF062B09DT1F1076 Drought Medicago truncatula cDNA clone NF062B09DT
5', mRNA sequence
Length = 623
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||| ||||| ||||||||||||||
Sbjct: 186 ggacagggatatggaatgacagaggcagg 214
>gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cDNA clone pGVN-57J18 5' end, mRNA
sequence
Length = 567
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||| ||||| ||||||||||||||
Sbjct: 14 ggacagggatatggaatgacagaggcagg 42
>gb|CA917753.1|CA917753 EST641900 GPOD Medicago truncatula cDNA clone GPOD-37M9, mRNA
sequence
Length = 628
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 191 ggacagggttatgggatgactgaagcagg 219
>gb|CA917856.1|CA917856 EST642003 GPOD Medicago truncatula cDNA clone GPOD-37B3, mRNA
sequence
Length = 450
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 262 ggacagggttatgggatgactgaagcagg 290
>gb|CB892185.1|CB892185 EST649154 KV3 Medicago truncatula cDNA clone KV3-53O22, mRNA sequence
Length = 865
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||| ||||| ||||||||||||||
Sbjct: 809 ggacagggatatggaatgacagaggcagg 837
>gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula cDNA clone MTYBF07, mRNA sequence
Length = 765
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 181 ggacagggttatgggatgactgaagcagg 209
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
Length = 116810
Score = 42.1 bits (21), Expect = 0.18
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgacagaggcagg 1190
|||||||||||||||||||| || |||||
Sbjct: 30170 ggacagggttatgggatgactgaagcagg 30198
>emb|CR931733.2| Medicago truncatula chromosome 5 clone mth2-38a4, COMPLETE SEQUENCE
Length = 124746
Score = 42.1 bits (21), Expect = 0.18
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1882 taaaaaagatatatatacagaaaacggtgtaaa 1914
||||||||||||||||| |||||| | ||||||
Sbjct: 43524 taaaaaagatatatataaagaaaaagttgtaaa 43492
>gb|CG930963.1|CG930963 MBEEP62TRB mth2 Medicago truncatula genomic clone 39L4, DNA sequence
Length = 908
Score = 40.1 bits (20), Expect = 0.70
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgac 1181
||||||||||||||||||||
Sbjct: 887 ggacagggttatgggatgac 906
>emb|CR331204.1| mte1-60C8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 482
Score = 40.1 bits (20), Expect = 0.70
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 671 gctcggcggcgctgcctgag 690
||||||||||||||||||||
Sbjct: 344 gctcggcggcgctgcctgag 325
>emb|CR342524.1| mte1-75E14RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 572
Score = 40.1 bits (20), Expect = 0.70
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 671 gctcggcggcgctgcctgag 690
||||||||||||||||||||
Sbjct: 344 gctcggcggcgctgcctgag 325
>emb|CR312420.1| mte1-35A7RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 650
Score = 40.1 bits (20), Expect = 0.70
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 671 gctcggcggcgctgcctgag 690
||||||||||||||||||||
Sbjct: 344 gctcggcggcgctgcctgag 325
>gb|BF633805.1|BF633805 NF065F12DT1F1103 Drought Medicago truncatula cDNA clone NF065F12DT
5', mRNA sequence
Length = 225
Score = 40.1 bits (20), Expect = 0.70
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1162 ggacagggttatgggatgac 1181
||||||||||||||||||||
Sbjct: 144 ggacagggttatgggatgac 163
>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE
Length = 133229
Score = 40.1 bits (20), Expect = 0.70
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1177 atgacagaggcaggcccggt 1196
||||||||||||||||||||
Sbjct: 20603 atgacagaggcaggcccggt 20584
>gb|CG932719.1|CG932719 MBEBA78TR mth2 Medicago truncatula genomic clone 17M11, DNA
sequence
Length = 911
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 119 cgccgccgccaccacggcc 101
>gb|CG962326.1|CG962326 MBEFF74TF mth2 Medicago truncatula genomic clone 43M4, DNA sequence
Length = 701
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 124 cgccgccgccaccacggcc 106
>emb|CR336217.1| mte1-67O7FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 715
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 346 tcggcgccgccgccaccac 328
>emb|CR481270.1| mth2-193J11RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 646
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 124 cgccgccgccaccacggcc 106
>emb|CR306313.1| mte1-26H21RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 715
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1472 tcgaccggctcaaggagct 1490
|||||||||||||||||||
Sbjct: 366 tcgaccggctcaaggagct 384
>emb|CR512623.1| mth4-37G2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 277
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1878 aagctaaaaaagatatata 1896
|||||||||||||||||||
Sbjct: 264 aagctaaaaaagatatata 246
>gb|AW694598.1|AW694598 NF078B11ST1F1092 Developing stem Medicago truncatula cDNA clone
NF078B11ST 5', mRNA sequence
Length = 664
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 367 tcggcgccgccgccaccac 349
>gb|AW694707.1|AW694707 NF079C07ST1F1053 Developing stem Medicago truncatula cDNA clone
NF079C07ST 5', mRNA sequence
Length = 661
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 273 tcggcgccgccgccaccac 255
>gb|BF641220.1|BF641220 NF062B11IN1F1092 Insect herbivory Medicago truncatula cDNA clone
NF062B11IN 5', mRNA sequence
Length = 634
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 178 cgccgccgccaccacggcc 196
>gb|BF642398.1|BF642398 NF056C01IN1F1004 Insect herbivory Medicago truncatula cDNA clone
NF056C01IN 5', mRNA sequence
Length = 414
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 278 tcggcgccgccgccaccac 260
>gb|AW685678.2|AW685678 NF033E07NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF033E07NR 5', mRNA sequence
Length = 576
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 299 tcggcgccgccgccaccac 281
>gb|BE325266.2|BE325266 NF119C06ST1F1049 Developing stem Medicago truncatula cDNA clone
NF119C06ST 5', mRNA sequence
Length = 624
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 281 tcggcgccgccgccaccac 263
>gb|BE321878.2|BE321878 NF045G10IN1F1081 Insect herbivory Medicago truncatula cDNA clone
NF045G10IN 5', mRNA sequence
Length = 350
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 262 tcggcgccgccgccaccac 244
>gb|BE322756.2|BE322756 NF047C08IN1F1055 Insect herbivory Medicago truncatula cDNA clone
NF047C08IN 5', mRNA sequence
Length = 448
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 293 tcggcgccgccgccaccac 275
>gb|BG449107.1|BG449107 NF005A05IN1F1037 Insect herbivory Medicago truncatula cDNA clone
NF005A05IN 5', mRNA sequence
Length = 606
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 266 tcggcgccgccgccaccac 248
>gb|BG449356.1|BG449356 NF046G10IN1F1082 Insect herbivory Medicago truncatula cDNA clone
NF046G10IN 5', mRNA sequence
Length = 596
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 271 tcggcgccgccgccaccac 253
>gb|BG449462.1|BG449462 NF046F08IN1F1073 Insect herbivory Medicago truncatula cDNA clone
NF046F08IN 5', mRNA sequence
Length = 614
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 271 tcggcgccgccgccaccac 253
>gb|BG455339.1|BG455339 NF046H07PL1F1062 Phosphate starved leaf Medicago truncatula cDNA
clone NF046H07PL 5', mRNA sequence
Length = 660
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 171 tcggcgccgccgccaccac 153
>gb|BI265960.1|BI265960 NF094C04IN1F1034 Insect herbivory Medicago truncatula cDNA clone
NF094C04IN 5', mRNA sequence
Length = 393
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 283 tcggcgccgccgccaccac 265
>gb|BI270562.1|BI270562 NF010C09FL1F1070 Developing flower Medicago truncatula cDNA clone
NF010C09FL 5', mRNA sequence
Length = 644
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 40 tcggcgccgccgccaccac 22
>gb|CA917599.1|CA917599 EST641746 GPOD Medicago truncatula cDNA clone GPOD-36P3, mRNA
sequence
Length = 661
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 243 tcggcgccgccgccaccac 225
>gb|CX524523.1|CX524523 s13dNF07A04AT021_448390 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 475
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 304 tcggcgccgccgccaccac 286
>gb|CX524699.1|CX524699 s13dNF10A11AT085_478032 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 546
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 274 tcggcgccgccgccaccac 256
>gb|CX525276.1|CX525276 s13dNF16D11AT094_479186 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 544
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 302 tcggcgccgccgccaccac 284
>gb|CX526844.1|CX526844 s13dNF27C04AT034_514200 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 628
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 298 tcggcgccgccgccaccac 280
>gb|CX527151.1|CX527151 s13dNF40E06AT051_514814 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 617
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 49 tcggcgccgccgccaccac 31
>gb|CX527307.1|CX527307 s13dNF42B12AT101_515126 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 636
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 464 tcggcgccgccgccaccac 482
|||||||||||||||||||
Sbjct: 302 tcggcgccgccgccaccac 284
>gb|AC124970.21| Medicago truncatula clone mth2-7j19, complete sequence
Length = 128254
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1752 gattttaaggaaggatctg 1770
|||||||||||||||||||
Sbjct: 114126 gattttaaggaaggatctg 114144
>gb|AC134822.19| Medicago truncatula clone mth2-15j20, complete sequence
Length = 106152
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 9 ggaaacctgccatatacat 27
|||||||||||||||||||
Sbjct: 36050 ggaaacctgccatatacat 36068
>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence
Length = 114996
Score = 38.2 bits (19), Expect = 2.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1752 gattttaaggaaggatctg 1770
|||||||||||||||||||
Sbjct: 86414 gattttaaggaaggatctg 86396
Database: Mt_nucl_with_EST.fasta
Posted date: May 2, 2006 2:46 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 214,327
Number of Sequences: 392609
Number of extensions: 214327
Number of successful extensions: 15110
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15032
Number of HSP's gapped (non-prelim): 78
length of query: 1986
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1966
effective length of database: 433,880,813
effective search space: 853009678358
effective search space used: 853009678358
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)