BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573985.2.1
(373 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CG936178.1|CG936178 MBENI74TR mth2 Medicago truncatula g... 68 6e-010
gb|BI270588.1|BI270588 NF010B12FL1F1101 Developing flower M... 68 6e-010
gb|BI308315.1|BI308315 EST529725 GPOD Medicago truncatula c... 68 6e-010
gb|AJ845540.1|AJ845540 AJ845540 MtSNF Medicago truncatula c... 68 6e-010
gb|AJ845845.1|AJ845845 AJ845845 MtSNF Medicago truncatula c... 68 6e-010
gb|AC151000.3| Medicago truncatula chromosome 2 BAC clone m... 68 6e-010
gb|AC135102.16| Medicago truncatula clone mth2-8m3, complet... 68 6e-010
gb|AW692796.1|AW692796 NF055G07ST1F1000 Developing stem Med... 50 1e-004
gb|AJ500204.1|AJ500204 AJ500204 MTGIM Medicago truncatula c... 50 1e-004
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 50 1e-004
gb|AJ500879.1|AJ500879 AJ500879 MTGIM Medicago truncatula c... 48 5e-004
gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula c... 48 5e-004
gb|AJ499850.1|AJ499850 AJ499850 MTGIM Medicago truncatula c... 48 5e-004
gb|AJ548235.1|AJ548235 AJ548235 MTAPHEU Medicago truncatula... 48 5e-004
gb|AJ500082.1|AJ500082 AJ500082 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500141.1|AJ500141 AJ500141 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500179.1|AJ500179 AJ500179 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500199.1|AJ500199 AJ500199 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500506.1|AJ500506 AJ500506 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500542.1|AJ500542 AJ500542 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500564.1|AJ500564 AJ500564 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500591.1|AJ500591 AJ500591 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500633.1|AJ500633 AJ500633 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500761.1|AJ500761 AJ500761 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500908.1|AJ500908 AJ500908 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499628.1|AJ499628 AJ499628 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499636.1|AJ499636 AJ499636 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499771.1|AJ499771 AJ499771 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499814.1|AJ499814 AJ499814 MTGIM Medicago truncatula c... 46 0.002
gb|AJ846898.1|AJ846898 AJ846898 MtSTW Medicago truncatula c... 46 0.002
gb|AJ864411.1|AJ864411 AJ864411 Medicago truncatula cv. J5 ... 46 0.002
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 46 0.002
gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 ... 46 0.002
gb|AJ500058.1|AJ500058 AJ500058 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500142.1|AJ500142 AJ500142 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500169.1|AJ500169 AJ500169 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500279.1|AJ500279 AJ500279 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500313.1|AJ500313 AJ500313 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500321.1|AJ500321 AJ500321 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500346.1|AJ500346 AJ500346 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500388.1|AJ500388 AJ500388 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500399.1|AJ500399 AJ500399 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500430.1|AJ500430 AJ500430 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500466.1|AJ500466 AJ500466 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500507.1|AJ500507 AJ500507 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500541.1|AJ500541 AJ500541 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500579.1|AJ500579 AJ500579 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500615.1|AJ500615 AJ500615 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500743.1|AJ500743 AJ500743 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500744.1|AJ500744 AJ500744 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500747.1|AJ500747 AJ500747 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500758.1|AJ500758 AJ500758 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500834.1|AJ500834 AJ500834 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500841.1|AJ500841 AJ500841 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500874.1|AJ500874 AJ500874 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500875.1|AJ500875 AJ500875 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500913.1|AJ500913 AJ500913 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500916.1|AJ500916 AJ500916 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500940.1|AJ500940 AJ500940 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499251.1|AJ499251 AJ499251 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499345.1|AJ499345 AJ499345 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499430.1|AJ499430 AJ499430 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499543.1|AJ499543 AJ499543 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499713.1|AJ499713 AJ499713 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499723.1|AJ499723 AJ499723 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499752.1|AJ499752 AJ499752 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499788.1|AJ499788 AJ499788 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499978.1|AJ499978 AJ499978 MTGIM Medicago truncatula c... 44 0.008
gb|AJ499991.1|AJ499991 AJ499991 MTGIM Medicago truncatula c... 44 0.008
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 42 0.032
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 42 0.032
gb|AJ864414.1|AJ864414 AJ864414 Medicago truncatula cv. J5 ... 42 0.032
gb|AJ864442.1|AJ864442 AJ864442 Medicago truncatula cv. J5 ... 42 0.032
gb|AJ500201.1|AJ500201 AJ500201 MTGIM Medicago truncatula c... 40 0.13
gb|AJ500573.1|AJ500573 AJ500573 MTGIM Medicago truncatula c... 40 0.13
gb|AJ500679.1|AJ500679 AJ500679 MTGIM Medicago truncatula c... 40 0.13
>gb|CG936178.1|CG936178 MBENI74TR mth2 Medicago truncatula genomic clone 8M3, DNA sequence
Length = 845
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 164 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 223
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 224 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 283
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 284 cgcatccagcagtagtgatcattagg 309
>gb|BI270588.1|BI270588 NF010B12FL1F1101 Developing flower Medicago truncatula cDNA clone
NF010B12FL 5', mRNA sequence
Length = 650
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 369 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 310
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 309 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 250
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 249 cgcatccagcagtagtgatcattagg 224
>gb|BI308315.1|BI308315 EST529725 GPOD Medicago truncatula cDNA clone pGPOD-2B18 5' end,
mRNA sequence
Length = 694
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 218 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 159
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 158 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 99
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 98 cgcatccagcagtagtgatcattagg 73
>gb|AJ845540.1|AJ845540 AJ845540 MtSNF Medicago truncatula cDNA clone MtNF06M12N1, mRNA
sequence
Length = 295
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 144 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 203
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 204 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 263
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 264 cgcatccagcagtagtgatcattagg 289
>gb|AJ845845.1|AJ845845 AJ845845 MtSNF Medicago truncatula cDNA clone MtNF11L17N1, mRNA
sequence
Length = 298
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 143 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 202
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 203 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 262
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 263 cgcatccagcagtagtgatcattagg 288
>gb|AC151000.3| Medicago truncatula chromosome 2 BAC clone mth2-193p1, complete
sequence
Length = 120579
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 23398 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 23339
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 23338 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 23279
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 23278 cgcatccagcagtagtgatcattagg 23253
>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
Length = 144042
Score = 67.9 bits (34), Expect = 6e-010
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 180 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 239
Query: 118 gctagatctgagcaagagtgacactcggtgactggccttttgtagtcgatgtcctctggt 177
|| |||||||| ||| ||| || || ||||||||||| | ||||| || ||||||||
Sbjct: 240 gcaagatctgaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctggg 299
Query: 178 ctcatccagcagtaatggtcattagg 203
| |||||||||||| || ||||||||
Sbjct: 300 cgcatccagcagtagtgatcattagg 325
>gb|AW692796.1|AW692796 NF055G07ST1F1000 Developing stem Medicago truncatula cDNA clone
NF055G07ST 5', mRNA sequence
Length = 664
Score = 50.1 bits (25), Expect = 1e-004
Identities = 118/148 (79%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 58 taggttttgctgtccttgaacactatggaagctgcagccagggcagcagccatttcagac 117
|||| |||| |||| ||||| || ||||| || ||||||| |||||| |||||||| |
Sbjct: 647 taggctttgttgtctttgaaaacaatggatgcagcagccaaggcagcggccatttccgca 588
Query: 118 gctagatctgag--caagagtgacactcggtgactggccttttgtagtcgatgtcctctg 175
|| |||||||| ||| ||| || || ||||||||||| | ||||| || |||||||
Sbjct: 587 gcaagatctgaaaacaactgtggcattcagtgactggcctgtcatagtcaatatcctctg 528
Query: 176 gtctcatccagcagtaatggtcattagg 203
| | |||||||||||| || ||||||||
Sbjct: 527 ggcgcatccagcagtagtgatcattagg 500
>gb|AJ500204.1|AJ500204 AJ500204 MTGIM Medicago truncatula cDNA clone mtgmacc120013h03,
mRNA sequence
Length = 337
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 349 tcgtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||||
Sbjct: 313 tcgtacctcggccgcgaccacgcta 337
>gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs470, mRNA sequence
Length = 1151
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 349 tcgtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||||
Sbjct: 525 tcgtacctcggccgcgaccacgcta 549
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttcgagcggccgcccgggcagg 22
||||||||||||||||||||||
Sbjct: 273 ttcgagcggccgcccgggcagg 294
>gb|AJ500879.1|AJ500879 AJ500879 MTGIM Medicago truncatula cDNA clone mtgmacc120021b11,
mRNA sequence
Length = 332
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 350 cgtacctcggccgcgaccacgcta 373
||||||||||||||||||||||||
Sbjct: 309 cgtacctcggccgcgaccacgcta 332
>gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula cDNA clone mtgmacc120008b12,
mRNA sequence
Length = 350
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 350 cgtacctcggccgcgaccacgcta 373
||||||||||||||||||||||||
Sbjct: 327 cgtacctcggccgcgaccacgcta 350
>gb|AJ499850.1|AJ499850 AJ499850 MTGIM Medicago truncatula cDNA clone mtgmacc120009c12,
mRNA sequence
Length = 338
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 350 cgtacctcggccgcgaccacgcta 373
||||||||||||||||||||||||
Sbjct: 315 cgtacctcggccgcgaccacgcta 338
>gb|AJ548235.1|AJ548235 AJ548235 MTAPHEU Medicago truncatula cDNA clone mtaehac110002e11,
mRNA sequence
Length = 90
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgcta 373
||||||||||||||||||||||||
Sbjct: 37 cgtacctcggccgcgaccacgcta 14
>gb|AJ500082.1|AJ500082 AJ500082 MTGIM Medicago truncatula cDNA clone mtgmacc120012d08,
mRNA sequence
Length = 181
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 159 gtacctcggccgcgaccacgcta 181
>gb|AJ500141.1|AJ500141 AJ500141 MTGIM Medicago truncatula cDNA clone mtgmacc120013b10,
mRNA sequence
Length = 141
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 119 gtacctcggccgcgaccacgcta 141
>gb|AJ500179.1|AJ500179 AJ500179 MTGIM Medicago truncatula cDNA clone mtgmacc120013f01,
mRNA sequence
Length = 355
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 333 gtacctcggccgcgaccacgcta 355
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03,
mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 249 cgtacctcggccgcgaccacgct 227
Score = 42.1 bits (21), Expect = 0.032
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 227 tcgagcggccgcccgggcagg 207
>gb|AJ500199.1|AJ500199 AJ500199 MTGIM Medicago truncatula cDNA clone mtgmacc120013g10,
mRNA sequence
Length = 217
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 195 gtacctcggccgcgaccacgcta 217
>gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula cDNA clone mtgmacc120016e11,
mRNA sequence
Length = 323
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 301 gtacctcggccgcgaccacgcta 323
>gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula cDNA clone mtgmacc120017a03,
mRNA sequence
Length = 291
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 269 gtacctcggccgcgaccacgcta 291
>gb|AJ500506.1|AJ500506 AJ500506 MTGIM Medicago truncatula cDNA clone mtgmacc120017b07,
mRNA sequence
Length = 337
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 23 cgtacctcggccgcgaccacgct 1
>gb|AJ500542.1|AJ500542 AJ500542 MTGIM Medicago truncatula cDNA clone mtgmacc120017e10,
mRNA sequence
Length = 302
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 280 gtacctcggccgcgaccacgcta 302
>gb|AJ500564.1|AJ500564 AJ500564 MTGIM Medicago truncatula cDNA clone mtgmacc120017g08,
mRNA sequence
Length = 319
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 297 gtacctcggccgcgaccacgcta 319
>gb|AJ500591.1|AJ500591 AJ500591 MTGIM Medicago truncatula cDNA clone mtgmacc120018b01,
mRNA sequence
Length = 303
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 281 gtacctcggccgcgaccacgcta 303
>gb|AJ500633.1|AJ500633 AJ500633 MTGIM Medicago truncatula cDNA clone mtgmacc120018e08,
mRNA sequence
Length = 203
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 181 gtacctcggccgcgaccacgcta 203
>gb|AJ500761.1|AJ500761 AJ500761 MTGIM Medicago truncatula cDNA clone mtgmacc120019h09,
mRNA sequence
Length = 337
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 23 cgtacctcggccgcgaccacgct 1
>gb|AJ500908.1|AJ500908 AJ500908 MTGIM Medicago truncatula cDNA clone mtgmacc120021e07,
mRNA sequence
Length = 308
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 286 gtacctcggccgcgaccacgcta 308
>gb|AJ499628.1|AJ499628 AJ499628 MTGIM Medicago truncatula cDNA clone mtgmacc120006e04,
mRNA sequence
Length = 229
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 23 cgtacctcggccgcgaccacgct 1
>gb|AJ499636.1|AJ499636 AJ499636 MTGIM Medicago truncatula cDNA clone mtgmacc120006f02,
mRNA sequence
Length = 291
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 269 gtacctcggccgcgaccacgcta 291
>gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula cDNA clone mtgmacc120008a04,
mRNA sequence
Length = 337
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 315 gtacctcggccgcgaccacgcta 337
>gb|AJ499771.1|AJ499771 AJ499771 MTGIM Medicago truncatula cDNA clone mtgmacc120008c12,
mRNA sequence
Length = 229
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 350 cgtacctcggccgcgaccacgct 372
|||||||||||||||||||||||
Sbjct: 23 cgtacctcggccgcgaccacgct 1
>gb|AJ499814.1|AJ499814 AJ499814 MTGIM Medicago truncatula cDNA clone mtgmacc120008g12,
mRNA sequence
Length = 261
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 239 gtacctcggccgcgaccacgcta 261
>gb|AJ846898.1|AJ846898 AJ846898 MtSTW Medicago truncatula cDNA clone MtTW01A03N1, mRNA
sequence
Length = 196
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 174 gtacctcggccgcgaccacgcta 196
>gb|AJ864411.1|AJ864411 AJ864411 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs313, mRNA sequence
Length = 500
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 75 gtacctcggccgcgaccacgcta 53
>gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs361, mRNA sequence
Length = 593
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 504 gtacctcggccgcgaccacgcta 526
Score = 42.1 bits (21), Expect = 0.032
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcgagcggccgcccgggcagg 22
|||||||||||||||||||||
Sbjct: 1 tcgagcggccgcccgggcagg 21
>gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs224, mRNA sequence
Length = 673
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 351 gtacctcggccgcgaccacgcta 373
|||||||||||||||||||||||
Sbjct: 631 gtacctcggccgcgaccacgcta 653
>gb|AJ500058.1|AJ500058 AJ500058 MTGIM Medicago truncatula cDNA clone mtgmacc120012b02,
mRNA sequence
Length = 182
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500142.1|AJ500142 AJ500142 MTGIM Medicago truncatula cDNA clone mtgmacc120013b11,
mRNA sequence
Length = 198
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500169.1|AJ500169 AJ500169 MTGIM Medicago truncatula cDNA clone mtgmacc120013e03,
mRNA sequence
Length = 287
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500279.1|AJ500279 AJ500279 MTGIM Medicago truncatula cDNA clone mtgmacc120014f08,
mRNA sequence
Length = 113
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula cDNA clone mtgmacc120014h08,
mRNA sequence
Length = 164
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttcgagcggccgcccgggcagg 22
||||||||||||||||||||||
Sbjct: 21 ttcgagcggccgcccgggcagg 42
>gb|AJ500313.1|AJ500313 AJ500313 MTGIM Medicago truncatula cDNA clone mtgmacc120015a09,
mRNA sequence
Length = 317
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500321.1|AJ500321 AJ500321 MTGIM Medicago truncatula cDNA clone mtgmacc120015b05,
mRNA sequence
Length = 233
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500346.1|AJ500346 AJ500346 MTGIM Medicago truncatula cDNA clone mtgmacc120015d06,
mRNA sequence
Length = 317
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500388.1|AJ500388 AJ500388 MTGIM Medicago truncatula cDNA clone mtgmacc120015h02,
mRNA sequence
Length = 156
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500399.1|AJ500399 AJ500399 MTGIM Medicago truncatula cDNA clone mtgmacc120016a01,
mRNA sequence
Length = 315
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500430.1|AJ500430 AJ500430 MTGIM Medicago truncatula cDNA clone mtgmacc120016c11,
mRNA sequence
Length = 345
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500466.1|AJ500466 AJ500466 MTGIM Medicago truncatula cDNA clone mtgmacc120016f12,
mRNA sequence
Length = 169
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500507.1|AJ500507 AJ500507 MTGIM Medicago truncatula cDNA clone mtgmacc120017b08,
mRNA sequence
Length = 247
Score = 44.1 bits (22), Expect = 0.008
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 351 gtacctcggccgcgaccacgct 372
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 57,038
Number of Sequences: 392609
Number of extensions: 57038
Number of successful extensions: 4053
Number of sequences better than 0.5: 84
Number of HSP's better than 0.5 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3961
Number of HSP's gapped (non-prelim): 92
length of query: 373
length of database: 441,732,993
effective HSP length: 19
effective length of query: 354
effective length of database: 434,273,422
effective search space: 153732791388
effective search space used: 153732791388
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)