BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3871878.2.1
         (950 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CA921800.1|CA921800  EST639518 MTUS Medicago truncatula c...   157   2e-036
gb|BF646432.1|BF646432  NF072B12EC1F1096 Elicited cell cultu...    84   2e-014
gb|BE325403.2|BE325403  NF087E12ST1F1087 Developing stem Med...    84   2e-014
gb|BG451915.1|BG451915  NF101F03DT1F1028 Drought Medicago tr...    84   2e-014
gb|BG647622.1|BG647622  EST509241 HOGA Medicago truncatula c...    84   2e-014
gb|AC152937.21|  Medicago truncatula clone mth2-96n6, comple...    80   4e-013
gb|BF004708.1|BF004708  EST433206 KV1 Medicago truncatula cD...    74   2e-011
gb|BQ139277.1|BQ139277  NF013E12PH1F1088 Phoma-infected Medi...    72   9e-011
gb|AC147012.23|  Medicago truncatula clone mth2-151j16, WORK...    62   9e-008
gb|AC174367.2|  Medicago truncatula clone mth2-47m8, WORKING...    62   9e-008
gb|AC181973.1|  Medicago truncatula clone mth2-12f6, WORKING...    62   9e-008
gb|AW692995.1|AW692995  NF058A10ST1F1000 Developing stem Med...    44   0.021
gb|BE318343.1|BE318343  NF037A12LF1F1086 Developing leaf Med...    44   0.021
gb|BG449719.1|BG449719  NF007B04IN1F1030 Insect herbivory Me...    44   0.021
gb|BG454948.1|BG454948  NF111A03LF1F1018 Developing leaf Med...    44   0.021
gb|BI309043.1|BI309043  EST530453 GPOD Medicago truncatula c...    44   0.021
gb|CF069593.1|CF069593  EST670314 MTUS Medicago truncatula c...    44   0.021
gb|DW016381.1|DW016381  EST1225342 MTY Medicago truncatula c...    44   0.021
gb|DW016709.1|DW016709  EST1225670 MTY Medicago truncatula c...    44   0.021
gb|BG646200.1|BG646200  EST507819 KV3 Medicago truncatula cD...    42   0.084
gb|AW690944.1|AW690944  NF039A07ST1F1000 Developing stem Med...    40   0.33 
gb|BE124847.1|BE124847  EST393882 GVN Medicago truncatula cD...    40   0.33 
gb|AL369577.1|AL369577  MtBA32A07F1 MtBA Medicago truncatula...    40   0.33 
gb|BF640544.1|BF640544  NF036F12IN1F1102 Insect herbivory Me...    40   0.33 
gb|AW692447.2|AW692447  NF051E05ST1F1000 Developing stem Med...    40   0.33 
gb|BI308850.1|BI308850  EST530260 GPOD Medicago truncatula c...    40   0.33 
gb|AJ499098.1|AJ499098  AJ499098 MTPOSE Medicago truncatula ...    40   0.33 
>gb|CA921800.1|CA921800 EST639518 MTUS Medicago truncatula cDNA clone MTUS-44E8, mRNA
           sequence
          Length = 817

 Score =  157 bits (79), Expect = 2e-036
 Identities = 226/275 (82%)
 Strand = Plus / Minus

                                                                       
Query: 104 cgggcaatacgcacctcaacaccagcaccacgatgatagtccatagttgaagtctcggct 163
           |||||||||||  | ||||| |||||||| |||||||| |||||||     |||||||| 
Sbjct: 768 cgggcaatacgaccttcaacgccagcacctcgatgataatccatagcaagtgtctcggca 709

                                                                       
Query: 164 gttctcttcccctcatcataacagctcctaacaccaataggattaacgtgcccccagtat 223
           |||| ||| || ||||||||||| |||||  ||||||| |||||||| | ||||||||| 
Sbjct: 708 gttcgctttccttcatcataacaactcctctcaccaattggattaacattcccccagtaa 649

                                                                       
Query: 224 gactccttctgtggatgctcaagtggatcaccataaacttcacttgtgctagtcaacaaa 283
           | ||| ||||| |||||||| |  ||||||||||| || ||||| || ||||| || | |
Sbjct: 648 gtctctttctgaggatgctccaaaggatcaccatatacctcactagtactagttaaaaga 589

                                                                       
Query: 284 aaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatttgtc 343
           ||||| || |||| || |||||| || ||||||||||| |  || ||||| |||||||||
Sbjct: 588 aacctcgccccaattctctttgctagccccaacatattaagtgtacccatcacatttgtc 529

                                              
Query: 344 ttgatcgtcttgattgggttatacttgtaatgaac 378
           ||||| |||||||| ||||||||||| ||||||||
Sbjct: 528 ttgattgtcttgatagggttatacttataatgaac 494
>gb|BF646432.1|BF646432 NF072B12EC1F1096 Elicited cell culture Medicago truncatula cDNA
           clone NF072B12EC 5', mRNA sequence
          Length = 637

 Score = 83.8 bits (42), Expect = 2e-014
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 ccctcatcataacagctcctaacaccaataggattaacgtgcccccagtatgactccttc 232
           |||||||| || ||||| |  |||||||| ||||||||||  |||||||| | |||||||
Sbjct: 322 ccctcatcgtagcagcttcggacaccaattggattaacgtttccccagtaagtctccttc 263

                                                 
Query: 233 tgtggatgctcaagtggatcaccataaacttcacttgt 270
           || |||||||| || |||||||||||||| ||||||||
Sbjct: 262 tgaggatgctccagaggatcaccataaacctcacttgt 225
>gb|BE325403.2|BE325403 NF087E12ST1F1087 Developing stem Medicago truncatula cDNA clone
           NF087E12ST 5', mRNA sequence
          Length = 490

 Score = 83.8 bits (42), Expect = 2e-014
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 ccctcatcataacagctcctaacaccaataggattaacgtgcccccagtatgactccttc 232
           |||||||| || ||||| |  |||||||| ||||||||||  |||||||| | |||||||
Sbjct: 390 ccctcatcgtagcagcttcggacaccaattggattaacgtttccccagtaagtctccttc 331

                                                 
Query: 233 tgtggatgctcaagtggatcaccataaacttcacttgt 270
           || |||||||| || |||||||||||||| ||||||||
Sbjct: 330 tgaggatgctccagaggatcaccataaacctcacttgt 293
>gb|BG451915.1|BG451915 NF101F03DT1F1028 Drought Medicago truncatula cDNA clone NF101F03DT
           5', mRNA sequence
          Length = 671

 Score = 83.8 bits (42), Expect = 2e-014
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 ccctcatcataacagctcctaacaccaataggattaacgtgcccccagtatgactccttc 232
           |||||||| || ||||| |  |||||||| ||||||||||  |||||||| | |||||||
Sbjct: 540 ccctcatcgtagcagcttcggacaccaattggattaacgtttccccagtaagtctccttc 481

                                                 
Query: 233 tgtggatgctcaagtggatcaccataaacttcacttgt 270
           || |||||||| || |||||||||||||| ||||||||
Sbjct: 480 tgaggatgctccagaggatcaccataaacctcacttgt 443
>gb|BG647622.1|BG647622 EST509241 HOGA Medicago truncatula cDNA clone pHOGA-17M16 5' end,
           mRNA sequence
          Length = 710

 Score = 83.8 bits (42), Expect = 2e-014
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                       
Query: 173 ccctcatcataacagctcctaacaccaataggattaacgtgcccccagtatgactccttc 232
           |||||||| || ||||| |  |||||||| ||||||||||  |||||||| | |||||||
Sbjct: 390 ccctcatcgtagcagcttcggacaccaattggattaacgtttccccagtaagtctccttc 331

                                                 
Query: 233 tgtggatgctcaagtggatcaccataaacttcacttgt 270
           || |||||||| || |||||||||||||| ||||||||
Sbjct: 330 tgaggatgctccagaggatcaccataaacctcacttgt 293
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence
          Length = 108802

 Score = 79.8 bits (40), Expect = 4e-013
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 195   caccaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatcac 254
             ||||||| ||||||||||  |||||||| | ||||||||| |||||||| || |||||||
Sbjct: 43494 caccaattggattaacgtttccccagtaagtctccttctgaggatgctccagaggatcac 43553

                             
Query: 255   cataaacttcacttgt 270
             ||||||| ||||||||
Sbjct: 43554 cataaacctcacttgt 43569
>gb|BF004708.1|BF004708 EST433206 KV1 Medicago truncatula cDNA clone pKV1-18M2, mRNA
           sequence
          Length = 260

 Score = 73.8 bits (37), Expect = 2e-011
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 194 acaccaataggattaacgtgcccccagtatgactccttctgtggatgctcaagtggatca 253
           |||||||| ||||||||||  |||||||| | ||||||||| |||||||| || ||||||
Sbjct: 206 acaccaattggattaacgtttccccagtaagtctccttctgaggatgctccagaggatca 147

                            
Query: 254 ccataaacttcacttgt 270
           ||||| || ||||||||
Sbjct: 146 ccatacacctcacttgt 130
>gb|BQ139277.1|BQ139277 NF013E12PH1F1088 Phoma-infected Medicago truncatula cDNA clone
           NF013E12PH 5', mRNA sequence
          Length = 639

 Score = 71.9 bits (36), Expect = 9e-011
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 311 cccaacatattcaaagttcccatgacatttgtcttgatcgtcttgattgggttatacttg 370
           ||||||||||| |  || ||||| |||||||||||||| |||||||| ||||||||||| 
Sbjct: 617 cccaacatattaagtgtacccatcacatttgtcttgattgtcttgatagggttatactta 558

                   
Query: 371 taatgaac 378
           ||||||||
Sbjct: 557 taatgaac 550
>gb|AC147012.23| Medicago truncatula clone mth2-151j16, WORKING DRAFT SEQUENCE, 2
             ordered pieces
          Length = 119544

 Score = 61.9 bits (31), Expect = 9e-008
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                         
Query: 244   aagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctt 303
             |||||||||||| || || |||||||| ||||||| |||||| | |||||| |||| |||
Sbjct: 67220 aagtggatcaccgtacacctcacttgtactagtcagcaaaaatcgtgcacccactctctt 67279

                            
Query: 304   tgccagacccaacat 318
             |||||  ||||||||
Sbjct: 67280 tgccaatcccaacat 67294
>gb|AC174367.2| Medicago truncatula clone mth2-47m8, WORKING DRAFT SEQUENCE
          Length = 76602

 Score = 61.9 bits (31), Expect = 9e-008
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 244  aagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctt 303
            |||||||||||| || || |||||||| ||||||| |||||| | |||||| |||| |||
Sbjct: 9367 aagtggatcaccgtacacctcacttgtactagtcagcaaaaatcgtgcacccactctctt 9308

                           
Query: 304  tgccagacccaacat 318
            |||||  ||||||||
Sbjct: 9307 tgccaatcccaacat 9293
>gb|AC181973.1| Medicago truncatula clone mth2-12f6, WORKING DRAFT SEQUENCE
          Length = 115891

 Score = 61.9 bits (31), Expect = 9e-008
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                         
Query: 244   aagtggatcaccataaacttcacttgtgctagtcaacaaaaaccttgcaccaactcgctt 303
             |||||||||||| || || |||||||| ||||||| |||||| | |||||| |||| |||
Sbjct: 48672 aagtggatcaccgtacacctcacttgtactagtcagcaaaaatcgtgcacccactctctt 48613

                            
Query: 304   tgccagacccaacat 318
             |||||  ||||||||
Sbjct: 48612 tgccaatcccaacat 48598
>gb|AW692995.1|AW692995 NF058A10ST1F1000 Developing stem Medicago truncatula cDNA clone
           NF058A10ST 5', mRNA sequence
          Length = 656

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 139 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 80

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 79  tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 20

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 19  atggtagatc 10
>gb|BE318343.1|BE318343 NF037A12LF1F1086 Developing leaf Medicago truncatula cDNA clone
           NF037A12LF 5', mRNA sequence
          Length = 674

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 486 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 427

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 426 tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 367

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 366 atggtagatc 357
>gb|BG449719.1|BG449719 NF007B04IN1F1030 Insect herbivory Medicago truncatula cDNA clone
           NF007B04IN 5', mRNA sequence
          Length = 632

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 345 tgatcgtcttgattgggttatacttgtaatgaac 378
           |||| |||||||| ||||||||||| ||||||||
Sbjct: 472 tgattgtcttgatagggttatacttataatgaac 439
>gb|BG454948.1|BG454948 NF111A03LF1F1018 Developing leaf Medicago truncatula cDNA clone
           NF111A03LF 5', mRNA sequence
          Length = 655

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 449 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 390

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 389 tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 330

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 329 atggtagatc 320
>gb|BI309043.1|BI309043 EST530453 GPOD Medicago truncatula cDNA clone pGPOD-10B15 5' end,
           mRNA sequence
          Length = 661

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 472 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 413

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 412 tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 353

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 352 atggtagatc 343
>gb|CF069593.1|CF069593 EST670314 MTUS Medicago truncatula cDNA clone MTUS-22B8, mRNA
           sequence
          Length = 784

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 715 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 656

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 655 tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 596

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 595 atggtagatc 586
>gb|DW016381.1|DW016381 EST1225342 MTY Medicago truncatula cDNA clone MTYAG47, mRNA
           sequence
          Length = 759

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 507 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 448

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 447 tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 388

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 387 atggtagatc 378
>gb|DW016709.1|DW016709 EST1225670 MTY Medicago truncatula cDNA clone MTYAK62, mRNA
           sequence
          Length = 761

 Score = 44.1 bits (22), Expect = 0.021
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                       
Query: 280 caaaaaccttgcaccaactcgctttgccagacccaacatattcaaagttcccatgacatt 339
           ||||| |||||| ||||||| |||||| || || | ||| |||| ||| || || |||||
Sbjct: 446 caaaatccttgctccaactctctttgcaagcccaagcatgttcagagtgccaatcacatt 387

                                                                       
Query: 340 tgtcttgatcgtcttgattgggttatacttgtaatgaacgggcgacgcggggcatgcgag 399
           |||||| || ||||| |  || ||||| |||||   ||  || || ||||||||||||||
Sbjct: 386 tgtctttattgtcttcacaggattatatttgtagaaaataggagatgcggggcatgcgag 327

                     
Query: 400 gtggtagatc 409
            |||||||||
Sbjct: 326 atggtagatc 317
>gb|BG646200.1|BG646200 EST507819 KV3 Medicago truncatula cDNA clone pKV3-48D14 5' end,
           mRNA sequence
          Length = 661

 Score = 42.1 bits (21), Expect = 0.084
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 11  gtcattggttgtcttcgtagtgcctgtgcaacaaaattgct 51
           |||| ||||||| | ||||  ||||||||||||||||||||
Sbjct: 602 gtcaatggttgtttgcgtatagcctgtgcaacaaaattgct 642
>gb|AW690944.1|AW690944 NF039A07ST1F1000 Developing stem Medicago truncatula cDNA clone
           NF039A07ST 5', mRNA sequence
          Length = 659

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 623 gcggggcatgcgagatggtagatc 600
>gb|BE124847.1|BE124847 EST393882 GVN Medicago truncatula cDNA clone pGVN-68I22, mRNA
           sequence
          Length = 642

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 627 gcggggcatgcgagatggtagatc 604
>gb|AL369577.1|AL369577 MtBA32A07F1 MtBA Medicago truncatula cDNA clone MtBA32A07 T3, mRNA
           sequence
          Length = 467

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 371 gcggggcatgcgagatggtagatc 348
>gb|BF640544.1|BF640544 NF036F12IN1F1102 Insect herbivory Medicago truncatula cDNA clone
           NF036F12IN 5', mRNA sequence
          Length = 405

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 387 gcggggcatgcgagatggtagatc 364
>gb|AW692447.2|AW692447 NF051E05ST1F1000 Developing stem Medicago truncatula cDNA clone
           NF051E05ST 5', mRNA sequence
          Length = 422

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 373 gcggggcatgcgagatggtagatc 350
>gb|BI308850.1|BI308850 EST530260 GPOD Medicago truncatula cDNA clone pGPOD-8N10 5' end,
           mRNA sequence
          Length = 629

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 80  gcggggcatgcgagatggtagatc 57
>gb|AJ499098.1|AJ499098 AJ499098 MTPOSE Medicago truncatula cDNA clone mt--acc955212b07,
           mRNA sequence
          Length = 542

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcggggcatgcgaggtggtagatc 409
           |||||||||||||| |||||||||
Sbjct: 239 gcggggcatgcgagatggtagatc 216
  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 144,424
Number of Sequences: 392609
Number of extensions: 144424
Number of successful extensions: 11251
Number of sequences better than  0.5: 27
Number of HSP's better than  0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11177
Number of HSP's gapped (non-prelim): 73
length of query: 950
length of database: 441,732,993
effective HSP length: 20
effective length of query: 930
effective length of database: 433,880,813
effective search space: 403509156090
effective search space used: 403509156090
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)