BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230358.2.1
(2136 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY162176.1| Medicago truncatula somatic embryogenesis re... 246 7e-063
gb|AY162177.1| Medicago truncatula somatic embryogenesis re... 236 6e-060
gb|BF520153.1|BF520153 EST457622 DSIL Medicago truncatula c... 184 2e-044
gb|CB892245.1|CB892245 EST649214 KV3 Medicago truncatula cD... 167 5e-039
gb|BG647340.1|BG647340 EST508959 HOGA Medicago truncatula c... 141 3e-031
gb|AW689066.1|AW689066 NF015A05ST1F1000 Developing stem Med... 131 3e-028
gb|BQ147240.1|BQ147240 NF038C06FL1F1050 Developing flower M... 129 1e-027
gb|BQ255362.1|BQ255362 MTNAL79TKM KVKC Medicago truncatula ... 125 2e-026
gb|CL314504.1|CL314504 mth2-131O17_T7 Medicago truncatula B... 111 2e-022
gb|CB894219.1|CB894219 EST647011 HOGA Medicago truncatula c... 111 2e-022
gb|AW773590.1|AW773590 EST332576 KV3 Medicago truncatula cD... 94 6e-017
gb|CX527768.1|CX527768 s13dNF47B09AT077_516048 Aphid-Infect... 94 6e-017
gb|BF004020.1|BF004020 EST432518 KV1 Medicago truncatula cD... 86 1e-014
gb|CA923216.1|CA923216 EST640934 MTUS Medicago truncatula c... 86 1e-014
emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2... 86 1e-014
emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2... 86 1e-014
gb|CG953747.1|CG953747 MBELN16TF mth2 Medicago truncatula g... 78 3e-012
gb|CX535105.1|CX535105 s13dNF84B03MJ029_388388 Methyl Jasmo... 78 3e-012
gb|AW688532.2|AW688532 NF008F10ST1F1000 Developing stem Med... 68 3e-009
gb|BH001076.1|BH001076 T122530b Medicago truncatula BAC lib... 62 2e-007
emb|CR304774.1| mte1-24M5RM1 BAC end, cultivar Jemalong A17... 62 2e-007
emb|CR294491.1| mte1-10I20FM1 BAC end, cultivar Jemalong A1... 54 5e-005
gb|BF643238.1|BF643238 NF002H05EC1F1045 Elicited cell cultu... 54 5e-005
gb|BG648669.1|BG648669 EST510288 HOGA Medicago truncatula c... 48 0.003
gb|BQ148152.1|BQ148152 NF062C12FL1F1098 Developing flower M... 48 0.003
gb|BQ155824.1|BQ155824 NF084F09IR1F1079 Irradiated Medicago... 48 0.003
gb|CX535127.1|CX535127 s13dNF84D05MJ046_388432 Methyl Jasmo... 48 0.003
gb|CX539791.1|CX539791 s13dNF0HB12GS093_462854 Germinating ... 48 0.003
gb|CX542101.1|CX542101 s13dNF85B09GS077_467510 Germinating ... 48 0.003
gb|AW328935.2|AW328935 N200127e rootphos(-) Medicago trunca... 44 0.049
gb|BM779318.1|BM779318 EST589894 KV2 Medicago truncatula cD... 44 0.049
gb|AC126784.11| Medicago truncatula clone mth2-36b12, compl... 44 0.049
gb|AC163384.3| Medicago truncatula chromosome 7 clone mth2-... 44 0.049
gb|AC146972.29| Medicago truncatula clone mth2-128d9, WORKI... 44 0.049
gb|CG938592.1|CG938592 MBEIP81TF mth2 Medicago truncatula g... 42 0.19
gb|CG963540.1|CG963540 MBEFU20TF mth2 Medicago truncatula g... 42 0.19
gb|BF519919.1|BF519919 EST457385 DSIL Medicago truncatula c... 42 0.19
gb|BF645214.1|BF645214 NF032F11EC1F1094 Elicited cell cultu... 42 0.19
gb|BF645884.1|BF645884 NF032C10EC1F1081 Elicited cell cultu... 42 0.19
gb|BF647243.1|BF647243 NF110A01EC1F1003 Elicited cell cultu... 42 0.19
gb|BF647244.1|BF647244 NF065H08EC1F1075 Elicited cell cultu... 42 0.19
gb|BF649797.1|BF649797 NF081E08EC1F1065 Elicited cell cultu... 42 0.19
gb|AW691218.2|AW691218 NF039B02ST1F1000 Developing stem Med... 42 0.19
gb|AW693280.2|AW693280 NF062D03ST1F1000 Developing stem Med... 42 0.19
gb|BG458124.1|BG458124 NF052H09PL1F1077 Phosphate starved l... 42 0.19
gb|BG648699.1|BG648699 EST510318 HOGA Medicago truncatula c... 42 0.19
gb|AJ502644.1|AJ502644 AJ502644 MTAMP Medicago truncatula c... 42 0.19
gb|CA917812.1|CA917812 EST641959 GPOD Medicago truncatula c... 42 0.19
gb|CB891566.1|CB891566 EST648535 KV3 Medicago truncatula cD... 42 0.19
gb|CF068241.1|CF068241 EST668962 MTUS Medicago truncatula c... 42 0.19
gb|CF068251.1|CF068251 EST668972 MTUS Medicago truncatula c... 42 0.19
gb|CX523997.1|CX523997 s13dNF12D09AT074_447338 Aphid-Infect... 42 0.19
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1)
mRNA, complete cds
Length = 2392
Score = 246 bits (124), Expect = 7e-063
Identities = 295/352 (83%)
Strand = Plus / Minus
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||| || |||
Sbjct: 1810 agtccttttacccaatcaagcagcataacatcatcatcattcgcaagtcgagcaaggtca 1751
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|| || || || ||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 1750 aaagctctttgtccagttataagctcaagaagcatgataccataaccaaaaacatcagtt 1691
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
||||| ||||||||||| |||||||||||||||||||| || ||||||||||| || |||
Sbjct: 1690 ttctctgaagacttgccagtagataggtactcgggagctatatgcccaattgtaccccga 1631
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
||||| ||||| |||||||| |||||||| |||||||| || || | || ||||| |||
Sbjct: 1630 acagcagttgtaacatgggtgtccttgtaatccataagttttgccaatccaaaatccccc 1571
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
||||| ||||| || || |||||||| | || || |||||||| || || ||||| |||
Sbjct: 1570 acaacagcctcaaactcttcatccaacaatatgttagcagctttcacgtcacgatgaatg 1511
Query: 851 attttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagatccca 902
||||| || || || ||||||||||| || ||||| || || || |||||||
Sbjct: 1510 atttttgggtcacaatgatcatgcaaatatgaaagacccctagctgatccca 1459
Score = 180 bits (91), Expect = 3e-043
Identities = 292/359 (81%)
Strand = Plus / Minus
Query: 1058 tgcaccgccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgta 1117
||||| |||||||| |||||||| || || || || ||||||||||| |||||||||||
Sbjct: 1303 tgcacagccatgctgatcatctctacttcagtctgaaactgaagctccccaccaggtgtc 1244
Query: 1118 cgctcctcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtac 1177
||||||||||||| |||||| || || |||| ||| || ||||| | | ||||||||||
Sbjct: 1243 cgctcctcttttaatcttttgacagcaaccagtgaaccgtcagccaaacgtcctttgtac 1184
Query: 1178 acttttccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagttgcaact 1237
|| || ||||| || |||||||| | ||||||||| || |||||| |||| |||||||||
Sbjct: 1183 accttgccaaaccctcctcttccaagaatgttcttattgctgaaagtatctgttgcaact 1124
Query: 1238 tgaagctcccgcaatgaaaactttttgagctgaccaagatggacttctggatcctcctcg 1297
|| | ||| || | ||| ||| | || ||||| |||||||| ||||| |||||||| ||
Sbjct: 1123 tgcaactctcggagtgagaacctcttaagctgcccaagatgaacttcaggatcctcttca 1064
Query: 1298 gcaggaacatcgaagaaatgctcttcaggtttacgacggcgccacattgcaaatgcaatt 1357
||||||||||| |||||| |||| ||||| | || |||||| |||||||||||||
Sbjct: 1063 gcaggaacatcaaagaaaaattcttgtggtttccttcgacgccaccatgcaaatgcaatt 1004
Query: 1358 gcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgctccagt 1416
||||| | ||||| | | || ||||| |||||||| ||||||||||||||||||||
Sbjct: 1003 gcaggtgcggcaaataatagagcagcaccggcagcaactcctccagctattgctccagt 945
Score = 93.7 bits (47), Expect = 6e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 1889 gcatttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaaccat 1948
|||||||| || |||||||| || ||||| ||||| ||||| || || ||||| ||||||
Sbjct: 472 gcatttcccagatcaactcttatgacactattatcattgttgcaggttacatgaaaccat 413
Query: 1949 gtacatggattaacaagagtgggatcccaactctgcaagacattgttagcatctt 2003
||||| ||||||||||| || ||||||||||| ||||| ||||| |||| |||||
Sbjct: 412 gtacaaggattaacaagtgtaggatcccaactttgcaaaacattattaggatctt 358
Score = 44.1 bits (22), Expect = 0.049
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1532 ttgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||| |||||||| ||||||||||| | ||||||||||||
Sbjct: 829 ttgtttgcaaaactgataggggtgaataacgaaaaggagcca 788
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1)
gene, complete cds
Length = 4206
Score = 236 bits (119), Expect = 6e-060
Identities = 287/343 (83%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
||||| ||||| ||||||||||| |||||||| ||||| ||||| || ||||| || ||
Sbjct: 3717 acccaatcaagcagcataacatcatcatcattcgcaagtcgagcaaggtcaaaagctctt 3658
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| ||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 3657 tgtccagttataagctcaagaagcatgataccataaccaaaaacatcagttttctctgaa 3598
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|||||||| |||||||||||||||||||| || ||||||||||| || |||||||| |||
Sbjct: 3597 gacttgccagtagataggtactcgggagctatatgcccaattgtaccccgaacagcagtt 3538
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| |||||||| |||||||| |||||||| || || | || ||||| |||||||| |||
Sbjct: 3537 gtaacatgggtgtccttgtaatccataagttttgccaatccaaaatcccccacaacagcc 3478
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttggga 859
|| || || |||||||| | || || |||||||| || || ||||| |||||||| ||
Sbjct: 3477 tcaaactcttcatccaacaatatgttagcagctttcacgtcacgatgaatgatttttggg 3418
Query: 860 tcgcagtgatcatgcaagtaagaaagtcctcttgcagatccca 902
|| || ||||||||||| || ||||| || || || |||||||
Sbjct: 3417 tcacaatgatcatgcaaatatgaaagacccctagctgatccca 3375
Score = 135 bits (68), Expect = 2e-029
Identities = 194/236 (82%)
Strand = Plus / Minus
Query: 1058 tgcaccgccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgta 1117
||||| |||||||| |||||||| || || || || ||||||||||| |||||||||||
Sbjct: 3118 tgcacagccatgctgatcatctctacttcagtctgaaactgaagctccccaccaggtgtc 3059
Query: 1118 cgctcctcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtac 1177
||||||||||||| |||||| || || |||| ||| || ||||| | | ||||||||||
Sbjct: 3058 cgctcctcttttaatcttttgacagcaaccagtgaaccgtcagccaaacgtcctttgtac 2999
Query: 1178 acttttccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagttgcaact 1237
|| || ||||| || |||||||| | ||||||||| || |||||| |||| |||||||||
Sbjct: 2998 accttgccaaaccctcctcttccaagaatgttcttattgctgaaagtatctgttgcaact 2939
Query: 1238 tgaagctcccgcaatgaaaactttttgagctgaccaagatggacttctggatcctc 1293
|| | ||| || | ||| ||| | || ||||| |||||||| ||||| ||||||||
Sbjct: 2938 tgcaactctcggagtgagaacctcttaagctgcccaagatgaacttcaggatcctc 2883
Score = 79.8 bits (40), Expect = 9e-013
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||| || ||||| ||||| ||||| || || ||||| ||||||||||| |||||||||
Sbjct: 980 actcttatgacactattatcattgttgcaggttacatgaaaccatgtacaaggattaaca 921
Query: 1964 agagtgggatcccaactctgcaagacattgttagcatctt 2003
|| || ||||||||||| ||||| ||||| |||| |||||
Sbjct: 920 agtgtaggatcccaactttgcaaaacattattaggatctt 881
Score = 56.0 bits (28), Expect = 1e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1345 tgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagc 1404
|||||||||||||||||| | ||||| | | || ||||| |||||||| ||||||||
Sbjct: 2743 tgcaaatgcaattgcaggtgcggcaaataatagagcagcaccggcagcaactcctccagc 2684
Query: 1405 tattgctccagt 1416
||||||||||||
Sbjct: 2683 tattgctccagt 2672
>gb|BF520153.1|BF520153 EST457622 DSIL Medicago truncatula cDNA clone pDSIL-22D16, mRNA
sequence
Length = 650
Score = 184 bits (93), Expect = 2e-044
Identities = 162/185 (87%)
Strand = Plus / Minus
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||| || |||
Sbjct: 186 agtccttttacccaatcaagcagcataacatcatcatcattcgcaagtcgagcaaggtca 127
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|| || || || ||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 126 aaagctctttgtccagttataagctcaagaagcatgataccataaccaaaaacatcagtt 67
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
||||| ||||||||||| |||||||||||||||||||| || ||||||||||| || |||
Sbjct: 66 ttctctgaagacttgccagtagataggtactcgggagctatatgcccaattgtaccccga 7
Query: 731 acagc 735
|||||
Sbjct: 6 acagc 2
>gb|CB892245.1|CB892245 EST649214 KV3 Medicago truncatula cDNA clone KV3-53L15, mRNA
sequence
Length = 802
Score = 167 bits (84), Expect = 5e-039
Identities = 210/252 (83%)
Strand = Plus / Minus
Query: 658 aaaaacatcagtcttctcagaagacttgccggtagataggtactcgggagcaatgtgccc 717
|||| |||||||||| || |||||||| || || || |||||||| || || || || ||
Sbjct: 780 aaaaccatcagtcttttctgaagactttccagttgacaggtactcaggtgctatatgtcc 721
Query: 718 aattgttccacgaacagctgttgtgacatgggtatccttgtagtccataagcttggcaag 777
||| || ||||| ||||| || || ||||||||||| ||||| ||||||||||| || |
Sbjct: 720 aatcgtaccacggacagcagtagtaacatgggtatctttgtaatccataagctttgctaa 661
Query: 778 cccgaaatcacccacaactgcctcgaagtcctcatccaaaagaatatttgcagctttgac 837
|||||||| ||||||||||| || || ||||||||||| | |||||||||||||| ||
Sbjct: 660 accgaaatctcccacaactgcttcaaattcctcatccaacaatatatttgcagctttcac 601
Query: 838 atcccgatggatgattttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcaga 897
||| ||||| || || || || || ||||||||||||||||||| ||| ||||| |||||
Sbjct: 600 atcacgatgaataatcttagggtcacagtgatcatgcaagtaagcaagccctctggcaga 541
Query: 898 tcccagtgcaat 909
||||||||||||
Sbjct: 540 tcccagtgcaat 529
Score = 107 bits (54), Expect = 4e-021
Identities = 285/362 (78%)
Strand = Plus / Minus
Query: 956 tctcgtaaacgtgatgccacactcccgttagccatgtatgggtagactaacaacctttca 1015
|||||||||| |||||| ||||| || || |||||||| || || || | ||| | ||||
Sbjct: 482 tctcgtaaacatgatgctacacttccattggccatgtaaggatacacaagcaaacgttca 423
Query: 1016 gtaggtgtcatgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatc 1075
|||| ||||||||| || |||||||| || || | || ||||| ||||| || |||
Sbjct: 422 gtagatgtcatgcaaaatccacgaagccgaagcaaattacgatgcacagccatactgatc 363
Query: 1076 atctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtctt 1135
|| || || |||||||| || || ||||| ||||| ||||||| |||||||| |||||
Sbjct: 362 atttccacttctgtttgaaattgcagctccccaccttgtgtacgttcctctttaagtctc 303
Query: 1136 ttcactgctaccaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcct 1195
|| || ||||| | || || |||||| | | |||||| || || ||||| || || |||
Sbjct: 302 tttacagctacaagtgtgctatcagccaagcgtcctttataaacctttccgaatccacct 243
Query: 1196 cttcctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaatgaa 1255
|| |||| ||| || ||||||||||| ||||| ||||| ||| | ||||| || | |||
Sbjct: 242 ctacctagaatatttttgttactgaagttatctgttgctactagcagctcacgtagagaa 183
Query: 1256 aactttttgagctgaccaagatggacttctggatcctcctcggcaggaacatcgaagaaa 1315
||| |||| || |||||||| || ||||| ||||||||||| |||||||| || ||||||
Sbjct: 182 aaccttttaagttgaccaaggtgaacttcgggatcctcctcagcaggaacgtcaaagaaa 123
Query: 1316 tg 1317
||
Sbjct: 122 tg 121
Score = 61.9 bits (31), Expect = 2e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1346 gcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagct 1405
|||| ||||||||||||| | ||||||| || || |||||||||||||| ||||||||
Sbjct: 92 gcaagtgcaattgcaggagcggcaaacaacagagcagcaccagcagcaactcctccagca 33
Query: 1406 attgctccagt 1416
|| ||||||||
Sbjct: 32 atagctccagt 22
>gb|BG647340.1|BG647340 EST508959 HOGA Medicago truncatula cDNA clone pHOGA-16J11 5' end,
mRNA sequence
Length = 584
Score = 141 bits (71), Expect = 3e-031
Identities = 143/167 (85%)
Strand = Plus / Minus
Query: 743 acatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcg 802
||||||||||| ||||| ||||||||||| || | |||||||| ||||||||||| ||
Sbjct: 518 acatgggtatctttgtaatccataagctttgctaaaccgaaatctcccacaactgcttca 459
Query: 803 aagtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcg 862
|| ||||||||||| | |||||||||||||| ||||| ||||| || || || || ||
Sbjct: 458 aattcctcatccaacaatatatttgcagctttcacatcacgatgaataatcttagggtca 399
Query: 863 cagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaat 909
||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 398 cagtgatcatgcaagtaagcaagccctctggcagatcccagtgcaat 352
Score = 54.0 bits (27), Expect = 5e-005
Identities = 217/279 (77%), Gaps = 1/279 (0%)
Strand = Plus / Minus
Query: 956 tctcgtaaacgtgatgccacactcccgttagccatgtatgggtagactaacaacctttca 1015
|||||||||| |||||| ||||| || || |||||||| || || || | ||| | ||||
Sbjct: 305 tctcgtaaacatgatgctacacttccattggccatgtaaggatacacaagcaaacgttca 246
Query: 1016 gtaggtgtcatgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatc 1075
|||| ||||||||| || |||||||| || || | || ||||| ||||| || |||
Sbjct: 245 gtagatgtcatgcaaaatccacgaagccgaagcaaattacgatgcacagccatactgatc 186
Query: 1076 atctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcct-cttttagtct 1134
|| || || |||||||| || || ||||| ||||| ||||||| |||| |||| |||||
Sbjct: 185 atttccacttctgtttgaaattgcagctccccaccttgtgtacgttccttctttaagtct 126
Query: 1135 tttcactgctaccaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcc 1194
|| || ||||| | || || |||||| | | |||||| || || ||||| || || ||
Sbjct: 125 ctttacagctacaagtgtgctatcagccaagcgtcctttataaacctttccgaatccacc 66
Query: 1195 tcttcctaaaatgttcttgttactgaaattatcagttgc 1233
||| |||| ||| || ||||||||||| ||||| |||||
Sbjct: 65 tctacctagaatatttttgttactgaagttatctgttgc 27
>gb|AW689066.1|AW689066 NF015A05ST1F1000 Developing stem Medicago truncatula cDNA clone
NF015A05ST 5', mRNA sequence
Length = 646
Score = 131 bits (66), Expect = 3e-028
Identities = 260/322 (80%), Gaps = 2/322 (0%)
Strand = Plus / Minus
Query: 1097 tgaagctcacca-ccaggtgtacgctcctctttt-agtcttttcactgctaccaatgagc 1154
|||||||| ||| |||||||| |||||||||||| | |||||| || || |||| ||| |
Sbjct: 590 tgaagctccccanccaggtgtccgctcctctttttaatcttttgacagcaaccagtgaac 531
Query: 1155 catcagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgt 1214
| ||||| | | |||||||||||| || ||||| || |||||||| | ||||||||| |
Sbjct: 530 cgtcagccaaacgtcctttgtacaccttgccaaaccctcctcttccaagaatgttcttat 471
Query: 1215 tactgaaattatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaa 1274
| |||||| |||| ||||||||||| | ||| || | ||| ||| | || ||||| ||||
Sbjct: 470 tgctgaaagtatctgttgcaacttgcaactctcggagtgagaacctcttaagctgcccaa 411
Query: 1275 gatggacttctggatcctcctcggcaggaacatcgaagaaatgctcttcaggtttacgac 1334
|||| ||||| |||||||| || ||||||||||| |||||| |||| ||||| | |
Sbjct: 410 gatgaacttcaggatcctcttcagcaggaacatcaaagaaaaattcttgtggtttccttc 351
Query: 1335 ggcgccacattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaa 1394
| |||||| |||||||||||||||||| | ||||| | | || ||||| |||||||
Sbjct: 350 gacgccaccatgcaaatgcaattgcaggtgcggcaaataatagagcagcaccggcagcaa 291
Query: 1395 cacctccagctattgctccagt 1416
| ||||||||||||||||||||
Sbjct: 290 ctcctccagctattgctccagt 269
Score = 44.1 bits (22), Expect = 0.049
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1532 ttgttggcaaaacttataggggtgaagagtgaaaaggagcca 1573
||||| |||||||| ||||||||||| | ||||||||||||
Sbjct: 153 ttgtttgcaaaactgataggggtgaataacgaaaaggagcca 112
>gb|BQ147240.1|BQ147240 NF038C06FL1F1050 Developing flower Medicago truncatula cDNA clone
NF038C06FL 5', mRNA sequence
Length = 640
Score = 129 bits (65), Expect = 1e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||| || |||
Sbjct: 145 agtccttttacccaatcaagcagcataacatcatcatcattcgcaagtcgagcaaggtca 86
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|| || || || ||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 85 aaagctctttgtccagttataagctcaagaagcatgataccataaccaaaaacatcagtt 26
Query: 671 ttctcagaagacttgcc 687
||||| |||||||||||
Sbjct: 25 ttctctgaagacttgcc 9
>gb|BQ255362.1|BQ255362 MTNAL79TKM KVKC Medicago truncatula cDNA clone pKVKC-12G7, mRNA
sequence
Length = 633
Score = 125 bits (63), Expect = 2e-026
Identities = 264/331 (79%)
Strand = Plus / Minus
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|||||||| ||||| ||||| | ||| ||||| |||||| |||||||| ||||| |||
Sbjct: 518 agtcctttaacccaatcaagcaacatcacatcatcatcaccggcaagacgtgctaggtca 459
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|| ||| |||| ||||| | || || |||||||| | ||||| |||||||||||||||
Sbjct: 458 aaagccgtctgtccagttgtcagttcaagaagcatcgtaccatatccaaaaacatcagtc 399
Query: 671 ttctcagaagacttgccggtagataggtactcgggagcaatgtgcccaattgttccacga 730
|| | |||||||| ||||| || |||||||| || | || ||||||| ||| || ||
Sbjct: 398 ttttatgaagactttccggttgacaggtactcaggtggtatatgcccaagtgtaccttga 339
Query: 731 acagctgttgtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcaccc 790
||||| || |||||||||||||| ||||| |||||||| | || | |||||||| ||
Sbjct: 338 acagcagtagtgacatgggtatctttgtaagccataagccttgctaaaccgaaatctcca 279
Query: 791 acaactgcctcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatg 850
|||||||| | || || |||||||| | |||||||||||||| ||||| ||||| ||
Sbjct: 278 acaactgctacaaattcatcatccaacaatatatttgcagctttcacatcacgatgaata 219
Query: 851 attttgggatcgcagtgatcatgcaagtaag 881
|| || || || || ||||||||||||||||
Sbjct: 218 atcttagggtcacaatgatcatgcaagtaag 188
>gb|CL314504.1|CL314504 mth2-131O17_T7 Medicago truncatula BAC end sequences Medicago
truncatula genomic 5', DNA sequence
Length = 674
Score = 111 bits (56), Expect = 2e-022
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 779 ccgaaatcacccacaactgcctcgaagtcctcatccaaaagaatatttgcagctttgaca 838
|||||||| |||||| |||| || || ||||||||||| | |||||||||||||| |||
Sbjct: 8 ccgaaatctcccacanctgcttcaaattcctcatccaacaatatatttgcagctttcaca 67
Query: 839 tcccgatggatgattttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagat 898
|| ||||| || || || || || ||||||||||||||||||| ||| ||||| ||||||
Sbjct: 68 tcacgatgaataatcttagggtcacagtgatcatgcaagtaagcaagccctctggcagat 127
Query: 899 cccagtgcaat 909
|||||||||||
Sbjct: 128 cccagtgcaat 138
>gb|CB894219.1|CB894219 EST647011 HOGA Medicago truncatula cDNA clone HOGA-30O22, mRNA
sequence
Length = 718
Score = 111 bits (56), Expect = 2e-022
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|||||||| ||||| ||||| | ||||||||| |||||||| |||||||| |||||||||
Sbjct: 173 agtcctttaacccaatcaagcaacataacatcatcatcattggcaagacgtgctagatca 114
Query: 611 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 670
|| ||||| || ||||| || || || |||||||| | ||||| |||||||||||||||
Sbjct: 113 aaagccctttgtccagttattagttcaagaagcatcacaccatatccaaaaacatcagtc 54
Query: 671 ttctcagaagacttgccggtagataggtactc 702
|| || |||||||| || || || ||||||||
Sbjct: 53 ttttctgaagactttccagttgacaggtactc 22
>gb|AW773590.1|AW773590 EST332576 KV3 Medicago truncatula cDNA clone pKV3-15A11, mRNA
sequence
Length = 556
Score = 93.7 bits (47), Expect = 6e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 1889 gcatttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaaccat 1948
|||||||| || |||||||| || ||||| ||||| ||||| || || ||||| ||||||
Sbjct: 402 gcatttcccagatcaactcttatgacactattatcattgttgcaggttacatgaaaccat 343
Query: 1949 gtacatggattaacaagagtgggatcccaactctgcaagacattgttagcatctt 2003
||||| ||||||||||| || ||||||||||| ||||| ||||| |||| |||||
Sbjct: 342 gtacaaggattaacaagtgtaggatcccaactttgcaaaacattattaggatctt 288
>gb|CX527768.1|CX527768 s13dNF47B09AT077_516048 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 622
Score = 93.7 bits (47), Expect = 6e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 1889 gcatttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaaccat 1948
|||||||| || |||||||| || ||||| ||||| ||||| || || ||||| ||||||
Sbjct: 457 gcatttcccagatcaactcttatgacactattatcattgttgcaggttacatgaaaccat 398
Query: 1949 gtacatggattaacaagagtgggatcccaactctgcaagacattgttagcatctt 2003
||||| ||||||||||| || ||||||||||| ||||| ||||| |||| |||||
Sbjct: 397 gtacaaggattaacaagtgtaggatcccaactttgcaaaacattattaggatctt 343
>gb|BF004020.1|BF004020 EST432518 KV1 Medicago truncatula cDNA clone pKV1-14I4, mRNA
sequence
Length = 855
Score = 85.7 bits (43), Expect = 1e-014
Identities = 181/227 (79%)
Strand = Plus / Minus
Query: 629 ataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccg 688
|||||||| || | || ||| ||||| ||||| || |||||||| || ||||||| |||
Sbjct: 759 ataagctcaagcaacaagattccatacccaaacacgtcagtcttttctgaagactgaccg 700
Query: 689 gtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgg 748
|| ||||||||||| ||||||||||| ||||| || ||||| || || || || ||||||
Sbjct: 699 gtggataggtactccggagcaatgtgaccaatggtgccacgcacggcagtggtcacatgg 640
Query: 749 gtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcc 808
||||| | | || | |||||| || || || |||||||| |||||||| ||||||||
Sbjct: 639 gtatctctatgatctaaaagcttagctagaccaaaatcaccaacaactgcttcgaagtct 580
Query: 809 tcatccaaaagaatatttgcagctttgacatcccgatggatgatttt 855
||||| | | || || || ||||||||||| |||||||| |||||
Sbjct: 579 tcatctagcaatatgttggctgctttgacatcgcgatggataatttt 533
>gb|CA923216.1|CA923216 EST640934 MTUS Medicago truncatula cDNA clone MTUS-64G5, mRNA
sequence
Length = 785
Score = 85.7 bits (43), Expect = 1e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 629 ataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccg 688
|||||||| || | || ||| ||||| ||||| || |||||||| || ||||||| |||
Sbjct: 460 ataagctcaagcaacaagattccatacccaaacacgtcagtcttttctgaagactgaccg 519
Query: 689 gtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgg 748
|| ||||||||||| ||||||||||| ||||| || ||||| || || || || ||||||
Sbjct: 520 gtggataggtactccggagcaatgtgaccaatggtgccacgcacggcagtggtcacatgg 579
Query: 749 gtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcc 808
||||| | | || | |||||| || || || |||||||| |||||||| ||||||||
Sbjct: 580 gtatctctatgatctaaaagcttagctagaccaaaatcaccaacaactgcttcgaagtct 639
Query: 809 tcatccaaaagaatatttgcagctttgacatcccgatggatgatttt 855
||||| | | || || || ||||||||||| |||||||| |||||
Sbjct: 640 tcatctagcaatatgttggctgctttgacatcgcgatggataatttt 686
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE
Length = 128654
Score = 85.7 bits (43), Expect = 1e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 629 ataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccg 688
|||||||| || | || ||| ||||| ||||| || |||||||| || ||||||| |||
Sbjct: 126635 ataagctcaagcaacaagattccatacccaaacacgtcagtcttttctgaagactgaccg 126694
Query: 689 gtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgg 748
|| ||||||||||| ||||||||||| ||||| || ||||| || || || || ||||||
Sbjct: 126695 gtggataggtactccggagcaatgtgaccaatggtgccacgcacggcagtggtcacatgg 126754
Query: 749 gtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcc 808
||||| | | || | |||||| || || || |||||||| |||||||| ||||||||
Sbjct: 126755 gtatctctatgatctaaaagcttagctagaccaaaatcaccaacaactgcttcgaagtct 126814
Query: 809 tcatccaaaagaatatttgcagctttgacatcccgatggatgatttt 855
||||| | | || || || ||||||||||| |||||||| |||||
Sbjct: 126815 tcatctagcaatatgttggctgctttgacatcgcgatggataatttt 126861
>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE
Length = 122251
Score = 85.7 bits (43), Expect = 1e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 629 ataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccg 688
|||||||| || | || ||| ||||| ||||| || |||||||| || ||||||| |||
Sbjct: 16423 ataagctcaagcaacaagattccatacccaaacacgtcagtcttttctgaagactgaccg 16482
Query: 689 gtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgg 748
|| ||||||||||| ||||||||||| ||||| || ||||| || || || || ||||||
Sbjct: 16483 gtggataggtactccggagcaatgtgaccaatggtgccacgcacggcagtggtcacatgg 16542
Query: 749 gtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcc 808
||||| | | || | |||||| || || || |||||||| |||||||| ||||||||
Sbjct: 16543 gtatctctatgatctaaaagcttagctagaccaaaatcaccaacaactgcttcgaagtct 16602
Query: 809 tcatccaaaagaatatttgcagctttgacatcccgatggatgatttt 855
||||| | | || || || ||||||||||| |||||||| |||||
Sbjct: 16603 tcatctagcaatatgttggctgctttgacatcgcgatggataatttt 16649
>gb|CG953747.1|CG953747 MBELN16TF mth2 Medicago truncatula genomic clone 81C8, DNA sequence
Length = 915
Score = 77.8 bits (39), Expect = 3e-012
Identities = 189/239 (79%)
Strand = Plus / Plus
Query: 1058 tgcaccgccatgctaatcatctcaacctctgtttggaactgaagctcaccaccaggtgta 1117
||||| |||||||| || || || || ||||| ||||| || ||||| ||||| |||
Sbjct: 639 tgcacagccatgctgattatttccacttctgtctggaattgcagctccccaccttgtgcg 698
Query: 1118 cgctcctcttttagtcttttcactgctaccaatgagccatcagcaagccttcctttgtac 1177
|| |||||||| |||||||| |||||||| | | || ||||| | | |||||||||
Sbjct: 699 cgttcctctttaagtctttttactgctacaagagtaccgtcagctaagcgtcctttgtaa 758
Query: 1178 acttttccaaaaccgcctcttcctaaaatgttcttgttactgaaattatcagttgcaact 1237
|| ||||| || || ||||| |||| |||||| | ||| ||||| ||||| ||||| |||
Sbjct: 759 acctttccgaatccacctctacctagaatgttttcgttgctgaagttatctgttgctact 818
Query: 1238 tgaagctcccgcaatgaaaactttttgagctgaccaagatggacttctggatcctcctc 1296
| ||||| |||| |||||| |||| ||||||||||| || ||||| |||||||||||
Sbjct: 819 agcagctcacgcagcgaaaaccttttaagctgaccaaggtgaacttcaggatcctcctc 877
Score = 61.9 bits (31), Expect = 2e-007
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 779 ccgaaatcacccacaactgcctcgaagtcctcatccaaaagaatatttgcagctttgaca 838
|||||||| || |||||||| || || ||||||||||| | ||||| || ||||| |||
Sbjct: 13 ccgaaatctccaacaactgcttcaaattcctcatccaacaatatattcgctgctttcaca 72
Query: 839 tcccgatggatgattttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagat 898
|| ||||| || || || || || || |||||||||||||||| ||| || || |||| |
Sbjct: 73 tcacgatgaataatcttagggtcacaatgatcatgcaagtaagcaagccccctggcagct 132
Query: 899 cccagtgcaat 909
||||| |||||
Sbjct: 133 cccagcgcaat 143
>gb|CX535105.1|CX535105 s13dNF84B03MJ029_388388 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 646
Score = 77.8 bits (39), Expect = 3e-012
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 551 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 610
|||||||| ||||| ||||| | ||||||||| |||||||| |||||||| |||||||||
Sbjct: 103 agtcctttaacccaatcaagcaacataacatcatcatcattggcaagacgtgctagatca 44
Query: 611 aatgccctctggccagtaataagctccagaagcat 645
|| ||||| || ||||| || || || ||||||||
Sbjct: 43 aaagccctttgtccagttattagttcaagaagcat 9
>gb|AW688532.2|AW688532 NF008F10ST1F1000 Developing stem Medicago truncatula cDNA clone
NF008F10ST 5', mRNA sequence
Length = 783
Score = 67.9 bits (34), Expect = 3e-009
Identities = 144/181 (79%)
Strand = Plus / Plus
Query: 629 ataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccg 688
|||||||| || | || ||| ||||| ||||| || |||||||| || ||||||| |||
Sbjct: 596 ataagctcaagcaacaagattccatacccaaacacgtcagtcttttctgaagactgaccg 655
Query: 689 gtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgg 748
|| ||||||||||| ||||||||||| ||||| || ||||| || || || | ||||||
Sbjct: 656 gtggataggtactccggagcaatgtgaccaatggtgccacgcacggcagtgggcacatgg 715
Query: 749 gtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcc 808
||||| | | || | |||||| | || || |||||||| |||||||| |||||||||
Sbjct: 716 gtatctctatgatctaaaagcttanctagaccaaaatcaccaacaactgcttcgaagtcc 775
Query: 809 t 809
|
Sbjct: 776 t 776
>gb|BH001076.1|BH001076 T122530b Medicago truncatula BAC library Medicago truncatula
genomic clone 081C08, DNA sequence
Length = 521
Score = 61.9 bits (31), Expect = 2e-007
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 779 ccgaaatcacccacaactgcctcgaagtcctcatccaaaagaatatttgcagctttgaca 838
|||||||| || |||||||| || || ||||||||||| | ||||| || ||||| |||
Sbjct: 14 ccgaaatctccaacaactgcttcaaattcctcatccaacaatatattcgctgctttcaca 73
Query: 839 tcccgatggatgattttgggatcgcagtgatcatgcaagtaagaaagtcctcttgcagat 898
|| ||||| || || || || || || |||||||||||||||| ||| || || |||| |
Sbjct: 74 tcacgatgaataatcttagggtcacaatgatcatgcaagtaagcaagccccctggcagct 133
Query: 899 cccagtgcaat 909
||||| |||||
Sbjct: 134 cccagcgcaat 144
>emb|CR304774.1| mte1-24M5RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 610
Score = 61.9 bits (31), Expect = 2e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1346 gcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagct 1405
|||| ||||||||||||| | ||||||| || || |||||||||||||| ||||||||
Sbjct: 513 gcaagtgcaattgcaggagcggcaaacaacagagcagcaccagcagcaactcctccagca 454
Query: 1406 attgctccagt 1416
|| ||||||||
Sbjct: 453 atagctccagt 443
>emb|CR294491.1| mte1-10I20FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 658
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 1167 ttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaa 1221
|||||||||| || ||||||||||| ||| |||| || ||||||||||| |||||
Sbjct: 16 ttcctttgtagacatttccaaaacctccttttcccaatatgttcttgttgctgaa 70
>gb|BF643238.1|BF643238 NF002H05EC1F1045 Elicited cell culture Medicago truncatula cDNA clone
NF002H05EC 5', mRNA sequence
Length = 585
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 1167 ttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttactgaa 1221
|||||||||| || ||||||||||| ||| |||| || ||||||||||| |||||
Sbjct: 71 ttcctttgtagacatttccaaaacctccttttcccaatatgttcttgttgctgaa 17
>gb|BG648669.1|BG648669 EST510288 HOGA Medicago truncatula cDNA clone pHOGA-23O22 5' end,
mRNA sequence
Length = 727
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatccca 1977
|||||||||||||| ||||||| ||||||||||| || |||||
Sbjct: 126 gtaacatggaaccaagtacatgagttaacaagagtagggtccca 83
>gb|BQ148152.1|BQ148152 NF062C12FL1F1098 Developing flower Medicago truncatula cDNA clone
NF062C12FL 5', mRNA sequence
Length = 660
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatccca 1977
|||||||||||||| ||||||| ||||||||||| || |||||
Sbjct: 213 gtaacatggaaccaagtacatgagttaacaagagtagggtccca 170
>gb|BQ155824.1|BQ155824 NF084F09IR1F1079 Irradiated Medicago truncatula cDNA clone NF084F09IR
5', mRNA sequence
Length = 636
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatccca 1977
|||||||||||||| ||||||| ||||||||||| || |||||
Sbjct: 194 gtaacatggaaccaagtacatgagttaacaagagtagggtccca 151
>gb|CX535127.1|CX535127 s13dNF84D05MJ046_388432 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 590
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatccca 1977
|||||||||||||| ||||||| ||||||||||| || |||||
Sbjct: 307 gtaacatggaaccaagtacatgagttaacaagagtagggtccca 264
>gb|CX539791.1|CX539791 s13dNF0HB12GS093_462854 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 385
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatccca 1977
|||||||||||||| ||||||| ||||||||||| || |||||
Sbjct: 208 gtaacatggaaccaagtacatgagttaacaagagtagggtccca 165
>gb|CX542101.1|CX542101 s13dNF85B09GS077_467510 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 621
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatccca 1977
|||||||||||||| ||||||| ||||||||||| || |||||
Sbjct: 229 gtaacatggaaccaagtacatgagttaacaagagtagggtccca 186
>gb|AW328935.2|AW328935 N200127e rootphos(-) Medicago truncatula cDNA clone MHRP-14D5, mRNA
sequence
Length = 592
Score = 44.1 bits (22), Expect = 0.049
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 766 aagcttggcaagcccgaaatca 787
||||||||||||||||||||||
Sbjct: 58 aagcttggcaagcccgaaatca 37
>gb|BM779318.1|BM779318 EST589894 KV2 Medicago truncatula cDNA clone pKV2-51L3, mRNA sequence
Length = 387
Score = 44.1 bits (22), Expect = 0.049
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatcccaactctg 1983
|||||||| ||||||||||| |||| || | |||||| |||||||||||
Sbjct: 156 gtaacatgaaaccatgtacaaggatccaccaaagtggggtcccaactctg 107
>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence
Length = 129102
Score = 44.1 bits (22), Expect = 0.049
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1057 gtgcaccgccatgctaatcatctcaacctctgtttggaactg 1098
|||||| |||| |||||||||||| | ||||||||||||||
Sbjct: 101004 gtgcactgccaagctaatcatctccaattctgtttggaactg 100963
>gb|AC163384.3| Medicago truncatula chromosome 7 clone mth2-50m11, *** SEQUENCING IN
PROGRESS ***, 3 ordered pieces
Length = 127263
Score = 44.1 bits (22), Expect = 0.049
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 766 aagcttggcaagcccgaaatca 787
||||||||||||||||||||||
Sbjct: 102132 aagcttggcaagcccgaaatca 102153
>gb|AC146972.29| Medicago truncatula clone mth2-128d9, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 147260
Score = 44.1 bits (22), Expect = 0.049
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1934 gtaacatggaaccatgtacatggattaacaagagtgggatcccaactctg 1983
|||||||| ||||||||||| |||| || | |||||| |||||||||||
Sbjct: 81806 gtaacatgaaaccatgtacaaggatccaccaaagtggggtcccaactctg 81855
>gb|CG938592.1|CG938592 MBEIP81TF mth2 Medicago truncatula genomic clone 63N18, DNA
sequence
Length = 866
Score = 42.1 bits (21), Expect = 0.19
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 767 agcttggcaagcccgaaatca 787
|||||||||||||||||||||
Sbjct: 1 agcttggcaagcccgaaatca 21
>gb|CG963540.1|CG963540 MBEFU20TF mth2 Medicago truncatula genomic clone 47C15, DNA sequence
Length = 715
Score = 42.1 bits (21), Expect = 0.19
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1170 ctttgtacacttttccaaaaccgcctcttccta 1202
||||||||||||||||||| || || |||||||
Sbjct: 547 ctttgtacacttttccaaagcctccacttccta 579
>gb|BF519919.1|BF519919 EST457385 DSIL Medicago truncatula cDNA clone pDSIL-22G23, mRNA
sequence
Length = 406
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 229 gtaacatgaaaccaagtacatggattaac 201
>gb|BF645214.1|BF645214 NF032F11EC1F1094 Elicited cell culture Medicago truncatula cDNA clone
NF032F11EC 5', mRNA sequence
Length = 650
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 217 gtaacatgaaaccaagtacatggattaac 189
>gb|BF645884.1|BF645884 NF032C10EC1F1081 Elicited cell culture Medicago truncatula cDNA clone
NF032C10EC 5', mRNA sequence
Length = 663
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 128 gtaacatgaaaccaagtacatggattaac 100
>gb|BF647243.1|BF647243 NF110A01EC1F1003 Elicited cell culture Medicago truncatula cDNA clone
NF110A01EC 5', mRNA sequence
Length = 431
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 264 gtaacatgaaaccaagtacatggattaac 236
>gb|BF647244.1|BF647244 NF065H08EC1F1075 Elicited cell culture Medicago truncatula cDNA clone
NF065H08EC 5', mRNA sequence
Length = 671
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 313 gtaacatgaaaccaagtacatggattaac 285
>gb|BF649797.1|BF649797 NF081E08EC1F1065 Elicited cell culture Medicago truncatula cDNA clone
NF081E08EC 5', mRNA sequence
Length = 615
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 268 gtaacatgaaaccaagtacatggattaac 240
>gb|AW691218.2|AW691218 NF039B02ST1F1000 Developing stem Medicago truncatula cDNA clone
NF039B02ST 5', mRNA sequence
Length = 510
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 360 gtaacatgaaaccaagtacatggattaac 332
>gb|AW693280.2|AW693280 NF062D03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF062D03ST 5', mRNA sequence
Length = 377
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 325 gtaacatgaaaccaagtacatggattaac 297
>gb|BG458124.1|BG458124 NF052H09PL1F1077 Phosphate starved leaf Medicago truncatula cDNA
clone NF052H09PL 5', mRNA sequence
Length = 669
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 318 gtaacatgaaaccaagtacatggattaac 290
>gb|BG648699.1|BG648699 EST510318 HOGA Medicago truncatula cDNA clone pHOGA-23F13 5' end,
mRNA sequence
Length = 697
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 203 gtaacatgaaaccaagtacatggattaac 175
>gb|AJ502644.1|AJ502644 AJ502644 MTAMP Medicago truncatula cDNA clone mtgmadc120023e02, mRNA
sequence
Length = 576
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 336 gtaacatgaaaccaagtacatggattaac 308
>gb|CA917812.1|CA917812 EST641959 GPOD Medicago truncatula cDNA clone GPOD-37I4, mRNA
sequence
Length = 697
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 332 gtaacatgaaaccaagtacatggattaac 304
>gb|CB891566.1|CB891566 EST648535 KV3 Medicago truncatula cDNA clone KV3-50J10, mRNA sequence
Length = 467
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 83 gtaacatgaaaccaagtacatggattaac 55
>gb|CF068241.1|CF068241 EST668962 MTUS Medicago truncatula cDNA clone MTUS-5E8, mRNA sequence
Length = 790
Score = 42.1 bits (21), Expect = 0.19
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1934 gtaacatggaaccatgtacatggattaac 1962
|||||||| ||||| ||||||||||||||
Sbjct: 334 gtaacatgaaaccaagtacatggattaac 306
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 459,487
Number of Sequences: 392609
Number of extensions: 459487
Number of successful extensions: 35128
Number of sequences better than 0.5: 52
Number of HSP's better than 0.5 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34986
Number of HSP's gapped (non-prelim): 138
length of query: 2136
length of database: 441,732,993
effective HSP length: 20
effective length of query: 2116
effective length of database: 433,880,813
effective search space: 918091800308
effective search space used: 918091800308
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)