BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3183567.2.1
(681 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW560340.1|AW560340 EST315388 DSIR Medicago truncatula c... 56 4e-006
gb|AW329592.2|AW329592 N200846e rootphos(-) Medicago trunca... 56 4e-006
gb|BE124769.1|BE124769 EST393804 GVN Medicago truncatula cD... 56 4e-006
gb|BE240502.1|BE240502 EST404551 MHRP- Medicago truncatula ... 56 4e-006
gb|BF632733.1|BF632733 NF046A11DT1F1085 Drought Medicago tr... 56 4e-006
gb|BF637472.1|BF637472 NF029A09PL1F1067 Phosphate starved l... 56 4e-006
gb|AW687613.2|AW687613 NF011E06RT1F1050 Developing root Med... 56 4e-006
gb|AW696884.2|AW696884 NF110A06ST1F1040 Developing stem Med... 56 4e-006
gb|BG451994.1|BG451994 NF043D09DT1F1075 Drought Medicago tr... 56 4e-006
gb|BG457249.1|BG457249 NF100E08PL1F1065 Phosphate starved l... 56 4e-006
gb|BG583755.1|BG583755 EST485510 GVN Medicago truncatula cD... 56 4e-006
gb|BG588780.1|BG588780 EST490589 MHRP- Medicago truncatula ... 56 4e-006
gb|BI263271.1|BI263271 NF087A12PL1F1097 Phosphate starved l... 56 4e-006
gb|BI263299.1|BI263299 NF088E12PL1F1099 Phosphate starved l... 56 4e-006
gb|BI270854.1|BI270854 NF002F12FL1F1103 Developing flower M... 56 4e-006
gb|BI272239.1|BI272239 NF014C08FL1F1065 Developing flower M... 56 4e-006
gb|BI272851.1|BI272851 NF097G11FL1F1087 Developing flower M... 56 4e-006
gb|BI308576.1|BI308576 EST529986 GPOD Medicago truncatula c... 56 4e-006
gb|BI309162.1|BI309162 EST530572 GPOD Medicago truncatula c... 56 4e-006
gb|BQ151839.1|BQ151839 NF063E10IR1F1083 Irradiated Medicago... 56 4e-006
gb|BQ155327.1|BQ155327 NF079B04IR1F1041 Irradiated Medicago... 56 4e-006
gb|BQ165451.1|BQ165451 EST611320 KVKC Medicago truncatula c... 56 4e-006
gb|BQ165452.1|BQ165452 EST611321 KVKC Medicago truncatula c... 56 4e-006
gb|CA917473.1|CA917473 EST641620 GPOD Medicago truncatula c... 56 4e-006
gb|CA918195.1|CA918195 EST642342 GPOD Medicago truncatula c... 56 4e-006
gb|CB891130.1|CB891130 EST648099 KV3 Medicago truncatula cD... 56 4e-006
gb|CA919583.1|CA919583 EST637301 MTUS Medicago truncatula c... 56 4e-006
gb|CX523228.1|CX523228 s13dNF1GB07VI061_472260 Virus-Infect... 56 4e-006
gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone m... 56 4e-006
gb|AC159613.12| Medicago truncatula clone mth2-157l7, WORKI... 56 4e-006
gb|DW015035.1|DW015035 EST1223996 MTY Medicago truncatula c... 54 2e-005
gb|AW775887.1|AW775887 EST334952 DSIL Medicago truncatula c... 52 6e-005
gb|AL369636.1|AL369636 MtBA32D02R1 MtBA Medicago truncatula... 52 6e-005
gb|AL370332.1|AL370332 MtBA37B06R1 MtBA Medicago truncatula... 52 6e-005
gb|AJ497757.1|AJ497757 AJ497757 MTFLOW Medicago truncatula ... 52 6e-005
gb|CB066659.1|CB066659 EST645282 GPOD Medicago truncatula c... 52 6e-005
gb|AL365836.1|AL365836 MtBA02F09R2 MtBA Medicago truncatula... 50 2e-004
gb|BI312370.1|BI312370 EST5314120 GESD Medicago truncatula ... 48 0.001
gb|BI307960.1|BI307960 EST529370 GPOD Medicago truncatula c... 44 0.015
gb|AW257466.1|AW257466 EST305603 KV2 Medicago truncatula cD... 42 0.060
gb|AW687952.1|AW687952 NF001D04ST1F1000 Developing stem Med... 42 0.060
gb|AC146719.32| Medicago truncatula clone mth2-17f11, compl... 42 0.060
gb|AC147364.7| Medicago truncatula clone mth2-68g24, comple... 40 0.24
>gb|AW560340.1|AW560340 EST315388 DSIR Medicago truncatula cDNA clone pDSIR-26H8, mRNA
sequence
Length = 646
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 449 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 508
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 509 tttttgatcggcgtcatcca 528
>gb|AW329592.2|AW329592 N200846e rootphos(-) Medicago truncatula cDNA clone MHRP-21H6, mRNA
sequence
Length = 517
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 420 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 361
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 360 tttttgatcggcgtcatcca 341
>gb|BE124769.1|BE124769 EST393804 GVN Medicago truncatula cDNA clone pGVN-67J1, mRNA
sequence
Length = 615
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 362 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 303
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 302 tttttgatcggcgtcatcca 283
>gb|BE240502.1|BE240502 EST404551 MHRP- Medicago truncatula cDNA clone pMHRP-45K8, mRNA
sequence
Length = 560
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 381 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 322
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 321 tttttgatcggcgtcatcca 302
>gb|BF632733.1|BF632733 NF046A11DT1F1085 Drought Medicago truncatula cDNA clone NF046A11DT
5', mRNA sequence
Length = 681
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 396 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 337
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 336 tttttgatcggcgtcatcca 317
>gb|BF637472.1|BF637472 NF029A09PL1F1067 Phosphate starved leaf Medicago truncatula cDNA
clone NF029A09PL 5', mRNA sequence
Length = 647
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 93 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 34
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 33 tttttgatcggcgtcatcca 14
>gb|AW687613.2|AW687613 NF011E06RT1F1050 Developing root Medicago truncatula cDNA clone
NF011E06RT 5', mRNA sequence
Length = 736
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 479 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 420
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 419 tttttgatcggcgtcatcca 400
>gb|AW696884.2|AW696884 NF110A06ST1F1040 Developing stem Medicago truncatula cDNA clone
NF110A06ST 5', mRNA sequence
Length = 622
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 258 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 199
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 198 tttttgatcggcgtcatcca 179
>gb|BG451994.1|BG451994 NF043D09DT1F1075 Drought Medicago truncatula cDNA clone NF043D09DT
5', mRNA sequence
Length = 641
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 231 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 172
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 171 tttttgatcggcgtcatcca 152
>gb|BG457249.1|BG457249 NF100E08PL1F1065 Phosphate starved leaf Medicago truncatula cDNA
clone NF100E08PL 5', mRNA sequence
Length = 644
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 249 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 190
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 189 tttttgatcggcgtcatcca 170
>gb|BG583755.1|BG583755 EST485510 GVN Medicago truncatula cDNA clone pGVN-74K20 5' end,
mRNA sequence
Length = 806
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 725 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 666
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 665 tttttgatcggcgtcatcca 646
>gb|BG588780.1|BG588780 EST490589 MHRP- Medicago truncatula cDNA clone pMHRP-57B15, mRNA
sequence
Length = 615
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 122 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 63
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 62 tttttgatcggcgtcatcca 43
>gb|BI263271.1|BI263271 NF087A12PL1F1097 Phosphate starved leaf Medicago truncatula cDNA
clone NF087A12PL 5', mRNA sequence
Length = 666
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 582 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 641
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 642 tttttgatcggcgtcatcca 661
>gb|BI263299.1|BI263299 NF088E12PL1F1099 Phosphate starved leaf Medicago truncatula cDNA
clone NF088E12PL 5', mRNA sequence
Length = 669
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 120 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 61
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 60 tttttgatcggcgtcatcca 41
>gb|BI270854.1|BI270854 NF002F12FL1F1103 Developing flower Medicago truncatula cDNA clone
NF002F12FL 5', mRNA sequence
Length = 646
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 417 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 358
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 357 tttttgatcggcgtcatcca 338
>gb|BI272239.1|BI272239 NF014C08FL1F1065 Developing flower Medicago truncatula cDNA clone
NF014C08FL 5', mRNA sequence
Length = 648
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 467 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 408
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 407 tttttgatcggcgtcatcca 388
>gb|BI272851.1|BI272851 NF097G11FL1F1087 Developing flower Medicago truncatula cDNA clone
NF097G11FL 5', mRNA sequence
Length = 697
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 466 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 407
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 406 tttttgatcggcgtcatcca 387
>gb|BI308576.1|BI308576 EST529986 GPOD Medicago truncatula cDNA clone pGPOD-7C16 5' end,
mRNA sequence
Length = 780
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 735 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 676
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 675 tttttgatcggcgtcatcca 656
>gb|BI309162.1|BI309162 EST530572 GPOD Medicago truncatula cDNA clone pGPOD-10L4 5' end,
mRNA sequence
Length = 602
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 337 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 278
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 277 tttttgatcggcgtcatcca 258
>gb|BQ151839.1|BQ151839 NF063E10IR1F1083 Irradiated Medicago truncatula cDNA clone
NF063E10IR 5', mRNA sequence
Length = 626
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 465 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 406
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 405 tttttgatcggcgtcatcca 386
>gb|BQ155327.1|BQ155327 NF079B04IR1F1041 Irradiated Medicago truncatula cDNA clone
NF079B04IR 5', mRNA sequence
Length = 682
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 465 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 406
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 405 tttttgatcggcgtcatcca 386
>gb|BQ165451.1|BQ165451 EST611320 KVKC Medicago truncatula cDNA clone pKVKC-9C8, mRNA
sequence
Length = 775
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 731 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 672
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 671 tttttgatcggcgtcatcca 652
>gb|BQ165452.1|BQ165452 EST611321 KVKC Medicago truncatula cDNA clone pKVKC-9C8, mRNA
sequence
Length = 707
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 514 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 573
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 574 tttttgatcggcgtcatcca 593
>gb|CA917473.1|CA917473 EST641620 GPOD Medicago truncatula cDNA clone GPOD-36C18, mRNA
sequence
Length = 739
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 718 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 659
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 658 tttttgatcggcgtcatcca 639
>gb|CA918195.1|CA918195 EST642342 GPOD Medicago truncatula cDNA clone GPOD-38F15, mRNA
sequence
Length = 804
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 737 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 678
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 677 tttttgatcggcgtcatcca 658
>gb|CB891130.1|CB891130 EST648099 KV3 Medicago truncatula cDNA clone KV3-49C10, mRNA
sequence
Length = 657
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 467 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 526
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 527 tttttgatcggcgtcatcca 546
>gb|CA919583.1|CA919583 EST637301 MTUS Medicago truncatula cDNA clone MTUS-15D10, mRNA
sequence
Length = 683
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 478 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 537
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 538 tttttgatcggcgtcatcca 557
>gb|CX523228.1|CX523228 s13dNF1GB07VI061_472260 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 552
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 418 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 359
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 358 tttttgatcggcgtcatcca 339
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete
sequence
Length = 116154
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 25205 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 25264
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 25265 tttttgatcggcgtcatcca 25284
>gb|AC159613.12| Medicago truncatula clone mth2-157l7, WORKING DRAFT SEQUENCE, 3 unordered
pieces
Length = 133141
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 107396 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 107337
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 107336 tttttgatcggcgtcatcca 107317
>gb|DW015035.1|DW015035 EST1223996 MTY Medicago truncatula cDNA clone MTYA013, mRNA
sequence
Length = 804
Score = 54.0 bits (27), Expect = 2e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||||||||||||| || ||||| || || || || || || |
Sbjct: 758 gtgtcgttcttggtaggcttccagttgccaacaaaggcatcatgagcagagggttgtgac 699
Query: 565 ttcttgatcggcgtcatcc 583
|| ||||||||||||||||
Sbjct: 698 tttttgatcggcgtcatcc 680
>gb|AW775887.1|AW775887 EST334952 DSIL Medicago truncatula cDNA clone pDSIL-3M8, mRNA
sequence
Length = 488
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggc 542
|||||||||||||| |||||||||||||| || |||||
Sbjct: 407 gtgtcgttcttggtaggcttccagttgccaacaaaggc 444
>gb|AL369636.1|AL369636 MtBA32D02R1 MtBA Medicago truncatula cDNA clone MtBA32D02 T7, mRNA
sequence
Length = 523
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggc 542
|||||||||||||| |||||||||||||| || |||||
Sbjct: 44 gtgtcgttcttggtaggcttccagttgccaacaaaggc 7
>gb|AL370332.1|AL370332 MtBA37B06R1 MtBA Medicago truncatula cDNA clone MtBA37B06 T7, mRNA
sequence
Length = 528
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggc 542
|||||||||||||| |||||||||||||| || |||||
Sbjct: 49 gtgtcgttcttggtaggcttccagttgccaacaaaggc 12
>gb|AJ497757.1|AJ497757 AJ497757 MTFLOW Medicago truncatula cDNA clone mt--abc955113g10,
mRNA sequence
Length = 680
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggc 542
|||||||||||||| |||||||||||||| || |||||
Sbjct: 166 gtgtcgttcttggtaggcttccagttgccaacaaaggc 129
>gb|CB066659.1|CB066659 EST645282 GPOD Medicago truncatula cDNA clone GPOD-34Z62, mRNA
sequence
Length = 740
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggc 542
|||||||||||||| |||||||||||||| || |||||
Sbjct: 724 gtgtcgttcttggtaggcttccagttgccaacaaaggc 687
>gb|AL365836.1|AL365836 MtBA02F09R2 MtBA Medicago truncatula cDNA clone MtBA02F09 T7, mRNA
sequence
Length = 549
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcc 533
|||||||||||||| ||||||||||||||
Sbjct: 33 gtgtcgttcttggtaggcttccagttgcc 5
>gb|BI312370.1|BI312370 EST5314120 GESD Medicago truncatula cDNA clone pGESD17H20 5' end,
mRNA sequence
Length = 765
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||||| |||| ||||||||| || ||||| || || || || || || |
Sbjct: 718 gtgtcgttcttggtaggctcccagttgccaacaaaggcatcatgagcagagggttgtgac 659
Query: 565 ttcttgatcggcgtcatcca 584
|| |||||||||||||||||
Sbjct: 658 tttttgatcggcgtcatcca 639
>gb|BI307960.1|BI307960 EST529370 GPOD Medicago truncatula cDNA clone pGPOD-1B2 5' end,
mRNA sequence
Length = 748
Score = 44.1 bits (22), Expect = 0.015
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggc 542
|||||||||||||| |||| ||||||||| || |||||
Sbjct: 728 gtgtcgttcttggtaggctcccagttgccaacaaaggc 691
>gb|AW257466.1|AW257466 EST305603 KV2 Medicago truncatula cDNA clone KV2-9N4, mRNA sequence
Length = 486
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 278 attgctgctgcttctggtcat 298
|||||||||||||||||||||
Sbjct: 141 attgctgctgcttctggtcat 161
>gb|AW687952.1|AW687952 NF001D04ST1F1000 Developing stem Medicago truncatula cDNA clone
NF001D04ST 5', mRNA sequence
Length = 623
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 278 attgctgctgcttctggtcat 298
|||||||||||||||||||||
Sbjct: 11 attgctgctgcttctggtcat 31
>gb|AC146719.32| Medicago truncatula clone mth2-17f11, complete sequence
Length = 127364
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 278 attgctgctgcttctggtcat 298
|||||||||||||||||||||
Sbjct: 101736 attgctgctgcttctggtcat 101716
>gb|AC147364.7| Medicago truncatula clone mth2-68g24, complete sequence
Length = 109540
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 156 attcaaaacaacatcaacac 175
||||||||||||||||||||
Sbjct: 74146 attcaaaacaacatcaacac 74127
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 123,198
Number of Sequences: 392609
Number of extensions: 123198
Number of successful extensions: 11624
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11533
Number of HSP's gapped (non-prelim): 59
length of query: 681
length of database: 441,732,993
effective HSP length: 19
effective length of query: 662
effective length of database: 434,273,422
effective search space: 287489005364
effective search space used: 287489005364
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)