BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3042568.2.1
(1174 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 123 4e-026
gb|AC137603.16| Medicago truncatula clone mth2-14b10, compl... 78 2e-012
gb|CG959572.1|CG959572 MBEAP05TRB mth2 Medicago truncatula ... 60 4e-007
gb|AL381590.1|AL381590 MtBC01H02R2 MtBC Medicago truncatula... 52 1e-004
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 52 1e-004
gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone m... 52 1e-004
gb|AC122723.6| Medicago truncatula clone mth2-5i15, complet... 52 1e-004
gb|AL389186.1|AL389186 MtBC53C09R1 MtBC Medicago truncatula... 50 4e-004
gb|BF520841.1|BF520841 EST458314 DSIL Medicago truncatula c... 50 4e-004
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 50 4e-004
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 50 4e-004
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 50 4e-004
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 48 0.002
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 48 0.002
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 48 0.002
gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula c... 46 0.007
emb|CR510206.1| mth4-21J10FM1 BAC end, cultivar Jemalong A1... 44 0.026
gb|AJ499720.1|AJ499720 AJ499720 MTGIM Medicago truncatula c... 44 0.026
gb|CX533175.1|CX533175 s13dNF0CG12MJ088_319513 Methyl Jasmo... 44 0.026
gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula c... 42 0.10
gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula c... 42 0.10
gb|AJ500295.1|AJ500295 AJ500295 MTGIM Medicago truncatula c... 42 0.10
gb|AJ500529.1|AJ500529 AJ500529 MTGIM Medicago truncatula c... 42 0.10
gb|AJ500700.1|AJ500700 AJ500700 MTGIM Medicago truncatula c... 42 0.10
gb|AJ499278.1|AJ499278 AJ499278 MTGIM Medicago truncatula c... 42 0.10
gb|AJ499442.1|AJ499442 AJ499442 MTGIM Medicago truncatula c... 42 0.10
gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula c... 42 0.10
gb|AJ499517.1|AJ499517 AJ499517 MTGIM Medicago truncatula c... 42 0.10
gb|AJ499942.1|AJ499942 AJ499942 MTGIM Medicago truncatula c... 42 0.10
gb|AJ499990.1|AJ499990 AJ499990 MTGIM Medicago truncatula c... 42 0.10
gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKIN... 42 0.10
gb|AC157648.18| Medicago truncatula clone mth2-68d9, comple... 42 0.10
emb|CR305360.1| mte1-24P20FM2 BAC end, cultivar Jemalong A1... 40 0.41
gb|BQ147161.1|BQ147161 NF034H03FL1F1031 Developing flower M... 40 0.41
gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula c... 40 0.41
gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula c... 40 0.41
gb|AJ499414.1|AJ499414 AJ499414 MTGIM Medicago truncatula c... 40 0.41
gb|AJ499829.1|AJ499829 AJ499829 MTGIM Medicago truncatula c... 40 0.41
gb|AC158209.13| Medicago truncatula clone mth2-154h5, compl... 40 0.41
gb|AC146584.35| Medicago truncatula clone mth2-68k18, WORKI... 40 0.41
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 123 bits (62), Expect = 4e-026
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 830 cagttcttcttcccaccaagcttcccagctttcttctcctttaacaccaataccacctcg 889
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 10302 cagttcttcttcccaccaagcttcccagctttcttctcccttaacaccaattccacctct 10243
Query: 890 ataaaacagccaatttgtccagtctc 915
|||| |||||||||||||||||||
Sbjct: 10242 gtaaagtagccaatttgtccagtctc 10217
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 936 tgccattcaaatccagatgggttaaataaatagggagcaaaaagccaagacaatgccata 995
||||| |||||||| || ||||| ||||||||||||||||| | ||| || | ||||||
Sbjct: 9858 tgccactcaaatcctgaagggttgaataaatagggagcaaacaaccaggatagagccata 9799
Query: 996 atccaactgcttat 1009
| ||||||||||||
Sbjct: 9798 aaccaactgcttat 9785
Score = 50.1 bits (25), Expect = 4e-004
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 243 atcccagcatttggattgttgccagcaaggatcagagatatctccaaacctctgctgaac 302
||||||| ||| |||||||| ||||||||||| | ||| || || || |||| ||| ||
Sbjct: 16797 atcccagtattgggattgttcccagcaaggattaaagaaatttctaaccctcggctaaaa 16738
Query: 303 gcctggttgaacagaagtcgcgtctggaaagtggatatgaatggaaaccacga 355
|||||||| |||| || || || ||||| || |||| ||||||||||||||
Sbjct: 16737 gcctggttaaacatcaggcgagtttggaatgtcgatacaaatggaaaccacga 16685
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
Length = 109793
Score = 77.8 bits (39), Expect = 2e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 853 cccagctttcttctcctttaacaccaataccacctcgataaaacagccaatttgtccagt 912
|||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 1 cccagctttcttctcccttaacaccaattccacctctgtaaagtagccaatttgtccagt 60
Query: 913 ctc 915
|||
Sbjct: 61 ctc 63
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 936 tgccattcaaatccagatgggttaaataaatagggagcaaaaagccaagacaatgccata 995
||||| |||||||| || ||||| ||||||||||||||||| | ||| || | ||||||
Sbjct: 422 tgccactcaaatcctgaagggttgaataaatagggagcaaacaaccaggatagagccata 481
Query: 996 atccaactgcttat 1009
| ||||||||||||
Sbjct: 482 aaccaactgcttat 495
Score = 40.1 bits (20), Expect = 0.41
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 919 aatcctcaacaatcttctgccattcaaatccagatgggttaaataaatagggagcaaaaa 978
|||| ||||||||||| ||||| ||||| ||||| || || || || |||||||| |||
Sbjct: 61433 aatcatcaacaatcttttgccactcaaacccagaaggattgaacaagaagggagcataaa 61492
Query: 979 gcca 982
||||
Sbjct: 61493 gcca 61496
>gb|CG959572.1|CG959572 MBEAP05TRB mth2 Medicago truncatula genomic clone 14B10, DNA sequence
Length = 521
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 936 tgccattcaaatccagatgggttaaataaatagggagcaaaaagccaagacaatgccata 995
||||| |||||||| || ||||| ||||||||||||||||| | ||| || | ||||||
Sbjct: 42 tgccactcaaatcctgaagggttgaataaatagggagcaaacaaccaggatagagccata 101
Query: 996 atccaactgcttat 1009
| ||||||||||||
Sbjct: 102 aaccaactgcttat 115
>gb|AL381590.1|AL381590 MtBC01H02R2 MtBC Medicago truncatula cDNA clone MtBC01H02 T7, mRNA
sequence
Length = 548
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 287 caaacctctgctgaacgcctggttgaacag 316
|||||||||||||||||| |||||||||||
Sbjct: 337 caaacctctgctgaacgcttggttgaacag 308
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03, mRNA
sequence
Length = 614
Score = 52.0 bits (26), Expect = 1e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1148 tcgtacctgcccgggcggccgctcga 1173
||||||||||||||||||||||||||
Sbjct: 202 tcgtacctgcccgggcggccgctcga 227
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete sequence
Length = 103090
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 287 caaacctctgctgaacgcctggttgaacag 316
|||||||||||||||||| |||||||||||
Sbjct: 10128 caaacctctgctgaacgcttggttgaacag 10099
Score = 44.1 bits (22), Expect = 0.026
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 832 gttcttcttcccaccaagcttcccagcttt 861
|||||||||||||||||| |||||| ||||
Sbjct: 8716 gttcttcttcccaccaagattcccaacttt 8687
Score = 40.1 bits (20), Expect = 0.41
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 919 aatcctcaacaatcttctgccattcaaatccagatgggtt 958
|||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 8629 aatcatcaacaattttttgccattcaaacccagaggggtt 8590
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
Length = 105353
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 287 caaacctctgctgaacgcctggttgaacag 316
|||||||||||||||||| |||||||||||
Sbjct: 81525 caaacctctgctgaacgcttggttgaacag 81496
Score = 44.1 bits (22), Expect = 0.026
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 832 gttcttcttcccaccaagcttcccagcttt 861
|||||||||||||||||| |||||| ||||
Sbjct: 80113 gttcttcttcccaccaagattcccaacttt 80084
Score = 40.1 bits (20), Expect = 0.41
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 919 aatcctcaacaatcttctgccattcaaatccagatgggtt 958
|||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 80026 aatcatcaacaattttttgccattcaaacccagaggggtt 79987
>gb|AL389186.1|AL389186 MtBC53C09R1 MtBC Medicago truncatula cDNA clone MtBC53C09 T7, mRNA
sequence
Length = 544
Score = 50.1 bits (25), Expect = 4e-004
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 243 atcccagcatttggattgttgccagcaaggatcagagatatctccaaacctctgctgaac 302
||||||| ||| |||||||| ||||||||||| | ||| || || || |||| ||| ||
Sbjct: 377 atcccagtattgggattgttcccagcaaggattaaagaaatttctaaccctcggctaaaa 318
Query: 303 gcctggttgaacagaagtcgcgtctggaaagtggatatgaatggaaaccacga 355
|||||||| |||| || || || ||||| || |||| ||||||||||||||
Sbjct: 317 gcctggttaaacatcaggcgagtttggaatgtcgatacaaatggaaaccacga 265
>gb|BF520841.1|BF520841 EST458314 DSIL Medicago truncatula cDNA clone pDSIL-39F19, mRNA
sequence
Length = 474
Score = 50.1 bits (25), Expect = 4e-004
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 243 atcccagcatttggattgttgccagcaaggatcagagatatctccaaacctctgctgaac 302
||||||| ||| |||||||| ||||||||||| | ||| || || || |||| ||| ||
Sbjct: 275 atcccagtattgggattgttcccagcaaggattaaagaaatttctaaccctcggctaaaa 216
Query: 303 gcctggttgaacagaagtcgcgtctggaaagtggatatgaatggaaaccacga 355
|||||||| |||| || || || ||||| || |||| ||||||||||||||
Sbjct: 215 gcctggttaaacatcaggcgagtttggaatgtcgatacaaatggaaaccacga 163
>gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula cDNA clone mtgmacc120014h08, mRNA
sequence
Length = 164
Score = 50.1 bits (25), Expect = 4e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||||||||||||
Sbjct: 45 gtacctgcccgggcggccgctcgaa 21
>gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula cDNA clone mtgmacc120017g10, mRNA
sequence
Length = 406
Score = 50.1 bits (25), Expect = 4e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||||||||||||
Sbjct: 290 gtacctgcccgggcggccgctcgaa 314
>gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 roots Medicago truncatula cDNA clone
MtGmEs470, mRNA sequence
Length = 1151
Score = 50.1 bits (25), Expect = 4e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||||||||||||
Sbjct: 297 gtacctgcccgggcggccgctcgaa 273
>gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula cDNA clone mtgmacc120014a04, mRNA
sequence
Length = 458
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcga 1173
||||||||||||||||||||||||
Sbjct: 300 gtacctgcccgggcggccgctcga 323
>gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula cDNA clone mtgmacc120019d05, mRNA
sequence
Length = 591
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcga 1173
||||||||||||||||||||||||
Sbjct: 339 gtacctgcccgggcggccgctcga 316
>gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs361, mRNA sequence
Length = 593
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcga 1173
||||||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgctcga 1
>gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula cDNA clone mtgmacc120001a07, mRNA
sequence
Length = 366
Score = 46.1 bits (23), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1149 cgtacctgcccgggcggccgctcgaa 1174
||||||||||||||||| ||||||||
Sbjct: 341 cgtacctgcccgggcggncgctcgaa 366
>emb|CR510206.1| mth4-21J10FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 432
Score = 44.1 bits (22), Expect = 0.026
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 830 cagttcttcttcccaccaagct 851
||||||||||||||||||||||
Sbjct: 22 cagttcttcttcccaccaagct 1
>gb|AJ499720.1|AJ499720 AJ499720 MTGIM Medicago truncatula cDNA clone mtgmacc120007f12, mRNA
sequence
Length = 374
Score = 44.1 bits (22), Expect = 0.026
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||| ||||||||
Sbjct: 350 gtacctgcccgggcggncgctcgaa 374
>gb|CX533175.1|CX533175 s13dNF0CG12MJ088_319513 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 611
Score = 44.1 bits (22), Expect = 0.026
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 326 ctggaaagtggatatgaatggaaaccacgagcaaatggctatgggtatgaaaatgaccat 385
|||||||||||| ||||| |||||||| || ||| ||||| ||| ||||| | |||
Sbjct: 265 ctggaaagtggaaatgaacggaaaccatgataaaaatgctattggtgaaaaaataatcat 206
Query: 386 ccccattccagcatcata 403
|||||||||||||||||
Sbjct: 205 acccattccagcatcata 188
>gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula cDNA clone mtgmacc120012e05, mRNA
sequence
Length = 114
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1149 cgtacctgcccgggcggccgctcga 1173
|||||||||||||||| ||||||||
Sbjct: 25 cgtacctgcccgggcgcccgctcga 1
>gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula cDNA clone mtgmacc120013f07, mRNA
sequence
Length = 557
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1149 cgtacctgcccgggcggccgctcga 1173
||||||||||||||| |||||||||
Sbjct: 25 cgtacctgcccgggcagccgctcga 1
>gb|AJ500295.1|AJ500295 AJ500295 MTGIM Medicago truncatula cDNA clone mtgmacc120014h01, mRNA
sequence
Length = 611
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||| ||||||||||||
Sbjct: 33 gtacctgcccggccggccgctcgaa 9
>gb|AJ500529.1|AJ500529 AJ500529 MTGIM Medicago truncatula cDNA clone mtgmacc120017d07, mRNA
sequence
Length = 557
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||| ||||||||||||
Sbjct: 533 gtacctgcccggacggccgctcgaa 557
>gb|AJ500700.1|AJ500700 AJ500700 MTGIM Medicago truncatula cDNA clone mtgmacc120019c06, mRNA
sequence
Length = 451
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
||||||||||||||||||| |||||
Sbjct: 427 gtacctgcccgggcggccgttcgaa 451
>gb|AJ499278.1|AJ499278 AJ499278 MTGIM Medicago truncatula cDNA clone mtgmacc120002b11, mRNA
sequence
Length = 438
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||| ||||||||
Sbjct: 414 gtacctgcccgggcggtcgctcgaa 438
>gb|AJ499442.1|AJ499442 AJ499442 MTGIM Medicago truncatula cDNA clone mtgmacc120004c11, mRNA
sequence
Length = 430
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||| ||||||||
Sbjct: 406 gtacctgcccgggcggacgctcgaa 430
>gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula cDNA clone mtgmacc120004f05, mRNA
sequence
Length = 128
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1149 cgtacctgcccgggcggccgctcga 1173
|||||||||||||||||||| ||||
Sbjct: 25 cgtacctgcccgggcggccgttcga 1
>gb|AJ499517.1|AJ499517 AJ499517 MTGIM Medicago truncatula cDNA clone mtgmacc120005b12, mRNA
sequence
Length = 321
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||| ||||||||
Sbjct: 297 gtacctgcccgggcggacgctcgaa 321
>gb|AJ499942.1|AJ499942 AJ499942 MTGIM Medicago truncatula cDNA clone mtgmacc120010e04, mRNA
sequence
Length = 527
Score = 42.1 bits (21), Expect = 0.10
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcga 1173
|||||||||||||||| |||||||
Sbjct: 504 gtacctgcccgggcggncgctcga 527
>gb|AJ499990.1|AJ499990 AJ499990 MTGIM Medicago truncatula cDNA clone mtgmacc120011b09, mRNA
sequence
Length = 314
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1150 gtacctgcccgggcggccgctcgaa 1174
|||||||||||||||| ||||||||
Sbjct: 290 gtacctgcccgggcggacgctcgaa 314
>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 116277
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 833 ttcttcttcccaccaagcttcccagcttt 861
|||||| |||||||||| |||||||||||
Sbjct: 96829 ttcttcatcccaccaagattcccagcttt 96857
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
Length = 84361
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 833 ttcttcttcccaccaagcttcccagcttt 861
|||||| |||||||||| |||||||||||
Sbjct: 77005 ttcttcatcccaccaagattcccagcttt 76977
>emb|CR305360.1| mte1-24P20FM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 654
Score = 40.1 bits (20), Expect = 0.41
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 483 attccccacccagttggcacaaat 506
|||||||| |||||||||||||||
Sbjct: 42 attccccaaccagttggcacaaat 19
>gb|BQ147161.1|BQ147161 NF034H03FL1F1031 Developing flower Medicago truncatula cDNA clone
NF034H03FL 5', mRNA sequence
Length = 266
Score = 40.1 bits (20), Expect = 0.41
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 919 aatcctcaacaatcttctgccattcaaatccagatgggtt 958
|||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 245 aatcatcaacaattttttgccattcaaacccagaggggtt 206
>gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula cDNA clone mtgmacc120012g12, mRNA
sequence
Length = 398
Score = 40.1 bits (20), Expect = 0.41
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1149 cgtacctgcccgggcggccg 1168
||||||||||||||||||||
Sbjct: 378 cgtacctgcccgggcggccg 397
>gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula cDNA clone mtgmacc120017e07, mRNA
sequence
Length = 489
Score = 40.1 bits (20), Expect = 0.41
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1149 cgtacctgcccgggcggccg 1168
||||||||||||||||||||
Sbjct: 23 cgtacctgcccgggcggccg 4
>gb|AJ499414.1|AJ499414 AJ499414 MTGIM Medicago truncatula cDNA clone mtgmacc120004a05, mRNA
sequence
Length = 360
Score = 40.1 bits (20), Expect = 0.41
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcga 1173
||||||||||||||| ||||||||
Sbjct: 24 gtacctgcccgggcgcccgctcga 1
>gb|AJ499829.1|AJ499829 AJ499829 MTGIM Medicago truncatula cDNA clone mtgmacc120009a05, mRNA
sequence
Length = 298
Score = 40.1 bits (20), Expect = 0.41
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1150 gtacctgcccgggcggccgctcga 1173
||||||||||||||| ||||||||
Sbjct: 24 gtacctgcccgggcgcccgctcga 1
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
Length = 93864
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 930 atcttctgccattcaaatccagatgggttaaa 961
||||||||||| |||||||| ||||| |||||
Sbjct: 55600 atcttctgccactcaaatcccgatggattaaa 55631
>gb|AC146584.35| Medicago truncatula clone mth2-68k18, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 102059
Score = 40.1 bits (20), Expect = 0.41
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 cacatgtcaatgtcaaaagaaggg 33
||||||||||| ||||||||||||
Sbjct: 19094 cacatgtcaatatcaaaagaaggg 19117
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 358,566
Number of Sequences: 392609
Number of extensions: 358566
Number of successful extensions: 25403
Number of sequences better than 0.5: 40
Number of HSP's better than 0.5 without gapping: 39
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25291
Number of HSP's gapped (non-prelim): 112
length of query: 1174
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1154
effective length of database: 433,880,813
effective search space: 500698458202
effective search space used: 500698458202
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)