BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750422.2.1
(1599 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF635584.1|BF635584 NF080F07DT1F1062 Drought Medicago tr... 96 1e-017
gb|CB892286.1|CB892286 EST649255 KV3 Medicago truncatula cD... 96 1e-017
gb|CB893127.1|CB893127 EST645919 HOGA Medicago truncatula c... 96 1e-017
gb|DW017962.1|DW017962 EST1226923 MTY Medicago truncatula c... 96 1e-017
gb|BF650146.1|BF650146 NF084G11EC1F1086 Elicited cell cultu... 90 7e-016
gb|CG922639.1|CG922639 MBEAH79TR mth2 Medicago truncatula g... 88 3e-015
gb|CG951718.1|CG951718 MBEDI57TFC mth2 Medicago truncatula ... 88 3e-015
gb|CG958285.1|CG958285 MBEAL90TR mth2 Medicago truncatula g... 88 3e-015
gb|CG932690.1|CG932690 MBELA54TF mth2 Medicago truncatula g... 68 3e-009
gb|AL366267.1|AL366267 MtBA05H12R1 MtBA Medicago truncatula... 66 1e-008
gb|BI269796.1|BI269796 NF016C08IR1F1065 Irradiated Medicago... 66 1e-008
gb|BI307827.1|BI307827 EST529237 GPOD Medicago truncatula c... 66 1e-008
gb|BQ154221.1|BQ154221 NF056G11IR1F1087 Irradiated Medicago... 66 1e-008
gb|BQ156418.1|BQ156418 NF092F04IR1F1043 Irradiated Medicago... 66 1e-008
gb|CB894475.1|CB894475 EST647267 HOGA Medicago truncatula c... 66 1e-008
gb|CX540688.1|CX540688 s13dNF55F02GS027_464652 Germinating ... 66 1e-008
gb|DW015103.1|DW015103 EST1224064 MTY Medicago truncatula c... 66 1e-008
gb|BE941416.1|BE941416 EST420995 MGHG Medicago truncatula c... 62 2e-007
gb|BG452833.1|BG452833 NF081C08LF1F1055 Developing leaf Med... 62 2e-007
gb|BF632292.1|BF632292 NF017E08DT1F1056 Drought Medicago tr... 58 2e-006
gb|CA920578.1|CA920578 EST638296 MTUS Medicago truncatula c... 58 2e-006
gb|CA922662.1|CA922662 EST640380 MTUS Medicago truncatula c... 58 2e-006
gb|AC143339.12| Medicago truncatula clone mth2-20g20, compl... 58 2e-006
gb|AC174311.4| Medicago truncatula clone mth2-145p15, WORKI... 58 2e-006
gb|AC174311.6| Medicago truncatula clone mth2-145p15, WORKI... 58 2e-006
gb|BF642465.1|BF642465 NF069A07IN1F1052 Insect herbivory Me... 56 1e-005
gb|DW016107.1|DW016107 EST1225068 MTY Medicago truncatula c... 56 1e-005
gb|CA917686.1|CA917686 EST641833 GPOD Medicago truncatula c... 54 4e-005
gb|CB893029.1|CB893029 EST645821 HOGA Medicago truncatula c... 54 4e-005
gb|AJ499364.1|AJ499364 AJ499364 MTGIM Medicago truncatula c... 54 4e-005
gb|CX521297.1|CX521297 s13dNF81C08VI056_450380 Virus-Infect... 54 4e-005
gb|CX532848.1|CX532848 s13dNF75G04MJ024_271978 Methyl Jasmo... 54 4e-005
gb|DW019063.1|DW019063 EST1228024 MTY Medicago truncatula c... 54 4e-005
gb|AW691981.1|AW691981 NF046C12ST1F1000 Developing stem Med... 52 1e-004
gb|AW207972.2|AW207972 M110993e DSIR Medicago truncatula cD... 52 1e-004
gb|AW683499.2|AW683499 NF015A07LF1F1052 Developing leaf Med... 52 1e-004
gb|BQ147738.1|BQ147738 NF046B10FL1F1080 Developing flower M... 52 1e-004
gb|AJ502181.1|AJ502181 AJ502181 MTAMP Medicago truncatula c... 52 1e-004
gb|CX525215.1|CX525215 s13dNF20G08AT068_479064 Aphid-Infect... 52 1e-004
gb|DW019174.1|DW019174 EST1228135 MTY Medicago truncatula c... 52 1e-004
gb|BF648487.1|BF648487 NF048A08EC1F1056 Elicited cell cultu... 50 6e-004
gb|BG450097.1|BG450097 NF015C01DT1F1004 Drought Medicago tr... 50 6e-004
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 50 6e-004
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 50 6e-004
gb|CX531457.1|CX531457 s13dNF34E04MJ024_256864 Methyl Jasmo... 50 6e-004
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 50 6e-004
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 48 0.002
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 48 0.002
gb|CG930961.1|CG930961 MBEKU64TF mth2 Medicago truncatula g... 46 0.009
gb|AW127174.2|AW127174 M110112 GVN Medicago truncatula cDNA... 46 0.009
gb|AL366266.1|AL366266 MtBA05H12F1 MtBA Medicago truncatula... 46 0.009
gb|AL367647.1|AL367647 MtBA16D02F1 MtBA Medicago truncatula... 46 0.009
gb|BF004158.1|BF004158 EST432656 KV1 Medicago truncatula cD... 46 0.009
gb|AW692843.2|AW692843 NF056C09ST1F1000 Developing stem Med... 46 0.009
gb|BM779848.1|BM779848 EST590424 KV2 Medicago truncatula cD... 46 0.009
gb|BM779949.1|BM779949 EST590525 KV2 Medicago truncatula cD... 46 0.009
gb|AJ499720.1|AJ499720 AJ499720 MTGIM Medicago truncatula c... 46 0.009
emb|CR486997.1| mth2-139J23FM1 BAC end, cultivar Jemalong A... 44 0.036
emb|CR499478.1| mth2-176G6FM1 BAC end, cultivar Jemalong A1... 44 0.036
gb|AW560852.1|AW560852 EST315900 DSIR Medicago truncatula c... 44 0.036
gb|BF632380.1|BF632380 NF033C11DT1F1083 Drought Medicago tr... 44 0.036
gb|BF648177.1|BF648177 NF038D08EC1F1073 Elicited cell cultu... 44 0.036
gb|AW686606.2|AW686606 NF043C01NR1F1000 Nodulated root Medi... 44 0.036
gb|AW688414.2|AW688414 NF007B05ST1F1000 Developing stem Med... 44 0.036
gb|BG450516.1|BG450516 NF034E09DT1F1071 Drought Medicago tr... 44 0.036
gb|BG647922.1|BG647922 EST509541 HOGA Medicago truncatula c... 44 0.036
gb|CA858248.1|CA858248 EST635503 GLSD Medicago truncatula c... 44 0.036
gb|CA858308.1|CA858308 EST635563 GLSD Medicago truncatula c... 44 0.036
gb|CB894164.1|CB894164 EST646956 HOGA Medicago truncatula c... 44 0.036
gb|AJ500295.1|AJ500295 AJ500295 MTGIM Medicago truncatula c... 44 0.036
gb|AJ500529.1|AJ500529 AJ500529 MTGIM Medicago truncatula c... 44 0.036
gb|AJ500700.1|AJ500700 AJ500700 MTGIM Medicago truncatula c... 44 0.036
gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula c... 44 0.036
gb|AJ499517.1|AJ499517 AJ499517 MTGIM Medicago truncatula c... 44 0.036
gb|AJ499942.1|AJ499942 AJ499942 MTGIM Medicago truncatula c... 44 0.036
gb|AC159613.12| Medicago truncatula clone mth2-157l7, WORKI... 44 0.036
gb|AJ499278.1|AJ499278 AJ499278 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499442.1|AJ499442 AJ499442 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499829.1|AJ499829 AJ499829 MTGIM Medicago truncatula c... 42 0.14
gb|AJ499990.1|AJ499990 AJ499990 MTGIM Medicago truncatula c... 42 0.14
>gb|BF635584.1|BF635584 NF080F07DT1F1062 Drought Medicago truncatula cDNA clone NF080F07DT
5', mRNA sequence
Length = 666
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| |||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 612 acacaacgggaatcaccagcatttgcaacaacaacttggttgtttctaataactgcaaca 553
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 552 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 493
Query: 1164 caatcatc 1171
||||||||
Sbjct: 492 caatcatc 485
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 457 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 404
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 243 cctccatgaccatcataaacaccaaaaaatg 213
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 181 atgagcatcttccattgatgcacgccagccttgcattgatga 140
>gb|CB892286.1|CB892286 EST649255 KV3 Medicago truncatula cDNA clone KV3-53D8, mRNA sequence
Length = 826
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| |||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 514 acacaacgggaatcaccagcatttgcaacaacaacttggttgtttctaataactgcaaca 455
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 454 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 395
Query: 1164 caatcatc 1171
||||||||
Sbjct: 394 caatcatc 387
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 359 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 306
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 145 cctccatgaccatcataaacaccaaaaaatg 115
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 83 atgagcatcttccattgatgcacgccagccttgcattgatga 42
>gb|CB893127.1|CB893127 EST645919 HOGA Medicago truncatula cDNA clone HOGA-26J24, mRNA
sequence
Length = 794
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| |||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 499 acacaacgggaatcaccagcatttgcaacaacaacttggttgtttctaataactgcaaca 440
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 439 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 380
Query: 1164 caatcatc 1171
||||||||
Sbjct: 379 caatcatc 372
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 344 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 291
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 130 cctccatgaccatcataaacaccaaaaaatg 100
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 68 atgagcatcttccattgatgcacgccagccttgcattgatga 27
>gb|DW017962.1|DW017962 EST1226923 MTY Medicago truncatula cDNA clone MTYB048, mRNA sequence
Length = 777
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| |||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 771 acacaacgggaatcaccagcatttgcaacaacaacttggttgtttctaataactgcaaca 712
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 711 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 652
Query: 1164 caatcatc 1171
||||||||
Sbjct: 651 caatcatc 644
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 616 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 563
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 402 cctccatgaccatcataaacaccaaaaaatg 372
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 340 atgagcatcttccattgatgcacgccagccttgcattgatga 299
>gb|BF650146.1|BF650146 NF084G11EC1F1086 Elicited cell culture Medicago truncatula cDNA clone
NF084G11EC 5', mRNA sequence
Length = 664
Score = 89.7 bits (45), Expect = 7e-016
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| |||||||||||||||||||| ||||||| |||| ||||| | || | ||| |||
Sbjct: 558 acacaacgggaatcaccagcatttgcaacaacaacttggttgtttntaataactgcaaca 499
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 498 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 439
Query: 1164 caatcatc 1171
||||||||
Sbjct: 438 caatcatc 431
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 403 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 350
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 189 cctccatgaccatcataaacaccaaaaaatg 159
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 127 atgagcatcttccattgatgcacgccagccttgcattgatga 86
>gb|CG922639.1|CG922639 MBEAH79TR mth2 Medicago truncatula genomic clone 12N14, DNA sequence
Length = 833
Score = 87.7 bits (44), Expect = 3e-015
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| ||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 191 acacaacgggaatcaccagcatttgaaacaacaacttggttgtttctaataactgcaaca 132
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 131 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 72
Query: 1164 caatcatc 1171
||||||||
Sbjct: 71 caatcatc 64
Score = 46.1 bits (23), Expect = 0.009
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcat 1225
||||||||||||||| |||||||||||
Sbjct: 36 tggagaccaaatcaacccttctatcat 10
>gb|CG951718.1|CG951718 MBEDI57TFC mth2 Medicago truncatula genomic clone 32I17, DNA sequence
Length = 870
Score = 87.7 bits (44), Expect = 3e-015
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| ||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 273 acacaacgggaatcaccagcatttgaaacaacaacttggttgtttctaataactgcaaca 214
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 213 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 154
Query: 1164 caatcatc 1171
||||||||
Sbjct: 153 caatcatc 146
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 118 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 65
>gb|CG958285.1|CG958285 MBEAL90TR mth2 Medicago truncatula genomic clone 13P12, DNA sequence
Length = 752
Score = 87.7 bits (44), Expect = 3e-015
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctaca 1103
||||| ||||||||||||||||||| ||||||| |||| ||||||| || | ||| |||
Sbjct: 192 acacaacgggaatcaccagcatttgaaacaacaacttggttgtttctaataactgcaaca 133
Query: 1104 cacgctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcc 1163
|| ||||| || || | ||||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 132 caggctgtgcttcctgaagttggtccagcaaaatcagaatgaggtccctcctcaaaggcc 73
Query: 1164 caatcatc 1171
||||||||
Sbjct: 72 caatcatc 65
Score = 54.0 bits (27), Expect = 4e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaa 1233
||||||||||||||| ||||||||||| |||||||
Sbjct: 37 tggagaccaaatcaacccttctatcatcccactaa 3
>gb|CG932690.1|CG932690 MBELA54TF mth2 Medicago truncatula genomic clone 78I11, DNA sequence
Length = 934
Score = 67.9 bits (34), Expect = 3e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 630 tggagaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 577
>gb|AL366267.1|AL366267 MtBA05H12R1 MtBA Medicago truncatula cDNA clone MtBA05H12 T7, mRNA
sequence
Length = 524
Score = 65.9 bits (33), Expect = 1e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 598 caggttttttgaactgcaccaggatcatggtcatgtt 634
||||||||||||||||||||| |||||||||||||||
Sbjct: 133 caggttttttgaactgcaccaagatcatggtcatgtt 97
>gb|BI269796.1|BI269796 NF016C08IR1F1065 Irradiated Medicago truncatula cDNA clone NF016C08IR
5', mRNA sequence
Length = 704
Score = 65.9 bits (33), Expect = 1e-008
Identities = 162/205 (79%)
Strand = Plus / Minus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 381 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 322
Query: 936 cgtcccatatggatgaagccccctgctttcattatcctttctctctcagctgcaagctct 995
||||| | |||||||| || || ||||| | ||||| ||| ||||| | |||| ||
Sbjct: 321 cgtccaacttggatgaaaccgccagcttttagaatcctgtctttctcaacctcaagatca 262
Query: 996 ggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacacatcgggaa 1055
|| ||||| || | || ||||||| ||||| || |||||| | ||||||| |||
Sbjct: 261 ggcttgtgatctttagacaaattgtgtgcctggcctttccttgataacacacatctagaa 202
Query: 1056 tcaccagcatttgccacaacaagtt 1080
|||||||||||||| ||||||||||
Sbjct: 201 tcaccagcatttgcaacaacaagtt 177
>gb|BI307827.1|BI307827 EST529237 GPOD Medicago truncatula cDNA clone pGPOD-1A9 5' end, mRNA
sequence
Length = 516
Score = 65.9 bits (33), Expect = 1e-008
Identities = 162/205 (79%)
Strand = Plus / Minus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 331 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 272
Query: 936 cgtcccatatggatgaagccccctgctttcattatcctttctctctcagctgcaagctct 995
||||| | |||||||| || || ||||| | ||||| ||| ||||| | |||| ||
Sbjct: 271 cgtccaacttggatgaaaccgccagcttttagaatcctgtctttctcaacctcaagatca 212
Query: 996 ggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacacatcgggaa 1055
|| ||||| || | || ||||||| ||||| || |||||| | ||||||| |||
Sbjct: 211 ggcttgtgatctttagacaaattgtgtgcctggcctttccttgataacacacatctagaa 152
Query: 1056 tcaccagcatttgccacaacaagtt 1080
|||||||||||||| ||||||||||
Sbjct: 151 tcaccagcatttgcaacaacaagtt 127
>gb|BQ154221.1|BQ154221 NF056G11IR1F1087 Irradiated Medicago truncatula cDNA clone NF056G11IR
5', mRNA sequence
Length = 631
Score = 65.9 bits (33), Expect = 1e-008
Identities = 162/205 (79%)
Strand = Plus / Minus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 381 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 322
Query: 936 cgtcccatatggatgaagccccctgctttcattatcctttctctctcagctgcaagctct 995
||||| | |||||||| || || ||||| | ||||| ||| ||||| | |||| ||
Sbjct: 321 cgtccaacttggatgaaaccgccagcttttagaatcctgtctttctcaacctcaagatca 262
Query: 996 ggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacacatcgggaa 1055
|| ||||| || | || ||||||| ||||| || |||||| | ||||||| |||
Sbjct: 261 ggcttgtgatctttagacaaattgtgtgcctggcctttccttgataacacacatctagaa 202
Query: 1056 tcaccagcatttgccacaacaagtt 1080
|||||||||||||| ||||||||||
Sbjct: 201 tcaccagcatttgcaacaacaagtt 177
>gb|BQ156418.1|BQ156418 NF092F04IR1F1043 Irradiated Medicago truncatula cDNA clone
NF092F04IR 5', mRNA sequence
Length = 577
Score = 65.9 bits (33), Expect = 1e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 598 caggttttttgaactgcaccaggatcatggtcatgtt 634
||||||||||||||||||||| |||||||||||||||
Sbjct: 288 caggttttttgaactgcaccaagatcatggtcatgtt 252
Score = 46.1 bits (23), Expect = 0.009
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 750 tgttggcttgacatgcagtcccaaatgccatcaca 784
||||| ||||||| ||||||||| |||||||||||
Sbjct: 136 tgttgacttgacaagcagtcccatatgccatcaca 102
>gb|CB894475.1|CB894475 EST647267 HOGA Medicago truncatula cDNA clone HOGA-31G14, mRNA
sequence
Length = 843
Score = 65.9 bits (33), Expect = 1e-008
Identities = 162/205 (79%)
Strand = Plus / Minus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 625 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 566
Query: 936 cgtcccatatggatgaagccccctgctttcattatcctttctctctcagctgcaagctct 995
||||| | |||||||| || || ||||| | ||||| ||| ||||| | |||| ||
Sbjct: 565 cgtccaacttggatgaaaccgccagcttttagaatcctgtctttctcaacctcaagatca 506
Query: 996 ggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacacatcgggaa 1055
|| ||||| || | || ||||||| ||||| || |||||| | ||||||| |||
Sbjct: 505 ggcttgtgatctttagacaaattgtgtgcctggcctttccttgataacacacatctagaa 446
Query: 1056 tcaccagcatttgccacaacaagtt 1080
|||||||||||||| ||||||||||
Sbjct: 445 tcaccagcatttgcaacaacaagtt 421
Score = 44.1 bits (22), Expect = 0.036
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1265 ttctcgccaacctctctgtccttgcatcatttcatccattctgaagaaag 1314
||||| ||| ||||| ||||| ||||||| ||||||||||||| |||||
Sbjct: 236 ttctctccaccctctttgtccacgcatcatctcatccattctgaggaaag 187
>gb|CX540688.1|CX540688 s13dNF55F02GS027_464652 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 589
Score = 65.9 bits (33), Expect = 1e-008
Identities = 162/205 (79%)
Strand = Plus / Minus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 507 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 448
Query: 936 cgtcccatatggatgaagccccctgctttcattatcctttctctctcagctgcaagctct 995
||||| | |||||||| || || ||||| | ||||| ||| ||||| | |||| ||
Sbjct: 447 cgtccaacttggatgaaaccgccagcttttagaatcctgtctttctcaacctcaagatca 388
Query: 996 ggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacacatcgggaa 1055
|| ||||| || | || ||||||| ||||| || |||||| | ||||||| |||
Sbjct: 387 ggcttgtgatctttagacaaattgtgtgcctggcctttccttgataacacacatctagaa 328
Query: 1056 tcaccagcatttgccacaacaagtt 1080
|||||||||||||| ||||||||||
Sbjct: 327 tcaccagcatttgcaacaacaagtt 303
Score = 44.1 bits (22), Expect = 0.036
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1265 ttctcgccaacctctctgtccttgcatcatttcatccattctgaagaaag 1314
||||| ||| ||||| ||||| ||||||| ||||||||||||| |||||
Sbjct: 118 ttctctccaccctctttgtccacgcatcatctcatccattctgaggaaag 69
>gb|DW015103.1|DW015103 EST1224064 MTY Medicago truncatula cDNA clone MTYA095, mRNA
sequence
Length = 620
Score = 65.9 bits (33), Expect = 1e-008
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 598 caggttttttgaactgcaccaggatcatggtcatgtt 634
||||||||||||||||||||| |||||||||||||||
Sbjct: 337 caggttttttgaactgcaccaagatcatggtcatgtt 301
Score = 46.1 bits (23), Expect = 0.009
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 750 tgttggcttgacatgcagtcccaaatgccatcaca 784
||||| ||||||| ||||||||| |||||||||||
Sbjct: 185 tgttgacttgacaagcagtcccatatgccatcaca 151
>gb|BE941416.1|BE941416 EST420995 MGHG Medicago truncatula cDNA clone pMGHG-3P10, mRNA
sequence
Length = 493
Score = 61.9 bits (31), Expect = 2e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
||||| |||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 65 acacaacgggaatcaccagcatttgcaacaacaacttggttgtttct 19
Score = 54.0 bits (27), Expect = 4e-005
Identities = 150/191 (78%)
Strand = Plus / Minus
Query: 750 tgttggcttgacatgcagtcccaaatgccatcacatgctacaacaacaaagtcgtcatca 809
||||| ||||||| ||||||||| ||||||||||| || | || | ||| || || |||
Sbjct: 358 tgttgacttgacaagcagtcccatatgccatcacaagccaacaccataaactcatcttca 299
Query: 810 tcgcagagctccacgacgttgatatcaggattggccgtcacaatttgcttctcgggaggc 869
|| || ||||| || ||| ||||| |||||||| || |||| |||||| || | ||
Sbjct: 298 tcacaaagctcaacagtgtttatatctggattggcagttacaacttgcttttcagcggga 239
Query: 870 aggaatttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttcca 929
|| || || |||||||| ||||||| ||| ||||| || |||| | ||||||||| |||
Sbjct: 238 agaaacttattctgtttaaattccatgtcaccaatagctcttgcaaggtttaaactgcca 179
Query: 930 tttactcgtcc 940
|| ||||||||
Sbjct: 178 ttcactcgtcc 168
>gb|BG452833.1|BG452833 NF081C08LF1F1055 Developing leaf Medicago truncatula cDNA clone
NF081C08LF 5', mRNA sequence
Length = 673
Score = 61.9 bits (31), Expect = 2e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 1202 agaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
|||||||||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 571 agaccaaatcaacccttctatcatcccactgaacttgtttatcttatctcc 521
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 360 cctccatgaccatcataaacaccaaaaaatg 330
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 298 atgagcatcttccattgatgcacgccagccttgcattgatga 257
>gb|BF632292.1|BF632292 NF017E08DT1F1056 Drought Medicago truncatula cDNA clone NF017E08DT
5', mRNA sequence
Length = 556
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 179 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 120
Query: 936 cgtcc 940
|||||
Sbjct: 119 cgtcc 115
>gb|CA920578.1|CA920578 EST638296 MTUS Medicago truncatula cDNA clone MTUS-29H7, mRNA
sequence
Length = 698
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 876 ttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttccatttact 935
|||||||| || ||||||| ||||||||||| || | |||||| ||||||||||| |||
Sbjct: 591 ttgttctgcttgaattccatatctccaattgctctagccaagttcaaacttccattgact 650
Query: 936 cgtcc 940
|||||
Sbjct: 651 cgtcc 655
>gb|CA922662.1|CA922662 EST640380 MTUS Medicago truncatula cDNA clone MTUS-56F6, mRNA
sequence
Length = 808
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 600 ggttttttgaactgcaccaggatcatggtcatgttgtcgca 640
||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 270 ggttttttgaactgcaccaagatcattgtcatgttatcgca 310
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 658 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 717
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
| || |||||||||||||| || |||| |||| || |||||||
Sbjct: 718 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttct 760
Score = 42.1 bits (21), Expect = 0.14
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 737 aaaatccaccagctgttggcttgacatgcagtcccaaatgccatcacatgcta 789
|||||| |||| ||||||||||| | ||| ||||| ||||||||||| ||||
Sbjct: 407 aaaatctaccaattgttggcttgataggcaatcccatatgccatcacaagcta 459
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence
Length = 99993
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 600 ggttttttgaactgcaccaggatcatggtcatgttgtcgca 640
||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 67094 ggttttttgaactgcaccaagatcattgtcatgttatcgca 67134
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 70630 gcatcttccattgttgcacgccaaccttgcatagatga 70667
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgcct 1026
||||||| |||||||| || || ||||||||||||||||
Sbjct: 69050 caagctcaggtttgtgatctctagataaattgtatgcct 69088
>gb|AC174311.4| Medicago truncatula clone mth2-145p15, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 121657
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 600 ggttttttgaactgcaccaggatcatggtcatgttgtcgca 640
||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 54451 ggttttttgaactgcaccaagatcattgtcatgttatcgca 54411
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 50914 gcatcttccattgttgcacgccaaccttgcatagatga 50877
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgcct 1026
||||||| |||||||| || || ||||||||||||||||
Sbjct: 52494 caagctcaggtttgtgatctctagataaattgtatgcct 52456
>gb|AC174311.6| Medicago truncatula clone mth2-145p15, WORKING DRAFT SEQUENCE, 8
unordered pieces
Length = 132586
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 600 ggttttttgaactgcaccaggatcatggtcatgttgtcgca 640
||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 65371 ggttttttgaactgcaccaagatcattgtcatgttatcgca 65331
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 61835 gcatcttccattgttgcacgccaaccttgcatagatga 61798
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgcct 1026
||||||| |||||||| || || ||||||||||||||||
Sbjct: 63415 caagctcaggtttgtgatctctagataaattgtatgcct 63377
>gb|BF642465.1|BF642465 NF069A07IN1F1052 Insect herbivory Medicago truncatula cDNA clone
NF069A07IN 5', mRNA sequence
Length = 625
Score = 56.0 bits (28), Expect = 1e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 1199 tggagaccaaatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
||||| ||||||||| | ||||||||| ||||| ||||||||||| || |||||
Sbjct: 581 tggagnccaaatcaaccnttctatcatcccactgaacttgtttatcttatctcc 528
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 367 cctccatgaccatcataaacaccaaaaaatg 337
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 305 atgagcatcttccattgatgcacgccagccttgcattgatga 264
>gb|DW016107.1|DW016107 EST1225068 MTY Medicago truncatula cDNA clone MTYAD26, mRNA sequence
Length = 864
Score = 56.0 bits (28), Expect = 1e-005
Identities = 145/184 (78%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 703 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 644
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttcttattaatgctacacacg 1107
| || |||||||||||||| || |||| |||| || ||||||| || | ||| ||||| |
Sbjct: 643 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttctaatgattgcaacacaag 584
Query: 1108 ctgtactcccacatgttggcccagcaaagtcagagtgaggtccctcctctgaagcccaat 1167
| ||||| || | |||| ||| ||||||| || ||||| |||| ||| | |||||||
Sbjct: 583 cagtacttcctgaatttggtccatcaaagtctgaatgaggccccttctcaaaggcccaat 524
Query: 1168 catc 1171
||||
Sbjct: 523 catc 520
Score = 50.1 bits (25), Expect = 6e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1480 catcttccatggttgctcgccatccttgcatagatga 1516
|||||||||| ||||| ||||| ||||||||||||||
Sbjct: 212 catcttccattgttgcacgccaaccttgcatagatga 176
>gb|CA917686.1|CA917686 EST641833 GPOD Medicago truncatula cDNA clone GPOD-36P18, mRNA
sequence
Length = 740
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 696 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 637
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
| || |||||||||||||| || |||| |||| || |||||||
Sbjct: 636 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttct 594
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 205 gcatcttccattgttgcacgccaaccttgcatagatga 168
>gb|CB893029.1|CB893029 EST645821 HOGA Medicago truncatula cDNA clone HOGA-26F5, mRNA
sequence
Length = 906
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 617 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 558
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
| || |||||||||||||| || |||| |||| || |||||||
Sbjct: 557 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttct 515
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 126 gcatcttccattgttgcacgccaaccttgcatagatga 89
>gb|AJ499364.1|AJ499364 AJ499364 MTGIM Medicago truncatula cDNA clone mtgmacc120003c01,
mRNA sequence
Length = 385
Score = 54.0 bits (27), Expect = 4e-005
Identities = 150/191 (78%)
Strand = Plus / Plus
Query: 750 tgttggcttgacatgcagtcccaaatgccatcacatgctacaacaacaaagtcgtcatca 809
||||| ||||||| ||||||||| ||||||||||| || | || | ||| || || |||
Sbjct: 65 tgttgacttgacaagcagtcccatatgccatcacaagccaacaccataaactcatcttca 124
Query: 810 tcgcagagctccacgacgttgatatcaggattggccgtcacaatttgcttctcgggaggc 869
|| || ||||| || ||| ||||| |||||||| || |||| |||||| || | ||
Sbjct: 125 tcacaaagctcaacagtgtttatatctggattggcagttacaacttgcttttcagcggga 184
Query: 870 aggaatttgttctgtttcaattccacgtctccaattgcccttgacaagtttaaacttcca 929
|| || || |||||||| ||||||| ||| ||||| || |||| | ||||||||| |||
Sbjct: 185 agaaacttattctgtttaaattccatgtcaccaatagctcttgcaaggtttaaactgcca 244
Query: 930 tttactcgtcc 940
|| ||||||||
Sbjct: 245 ttcactcgtcc 255
>gb|CX521297.1|CX521297 s13dNF81C08VI056_450380 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 604
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 257 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 198
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
| || |||||||||||||| || |||| |||| || |||||||
Sbjct: 197 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttct 155
Score = 42.1 bits (21), Expect = 0.14
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 737 aaaatccaccagctgttggcttgacatgcagtcccaaatgccatcacatgcta 789
|||||| |||| ||||||||||| | ||| ||||| ||||||||||| ||||
Sbjct: 508 aaaatctaccaattgttggcttgataggcaatcccatatgccatcacaagcta 456
>gb|CX532848.1|CX532848 s13dNF75G04MJ024_271978 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 658
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 653 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 594
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
| || |||||||||||||| || |||| |||| || |||||||
Sbjct: 593 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttct 551
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 162 gcatcttccattgttgcacgccaaccttgcatagatga 125
>gb|DW019063.1|DW019063 EST1228024 MTY Medicago truncatula cDNA clone MTYBE42, mRNA sequence
Length = 815
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 731 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 672
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgtttct 1090
| || |||||||||||||| || |||| |||| || |||||||
Sbjct: 671 agcgtgaatcaccagcattcgcaacaaaaagtaggttgtttct 629
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 240 gcatcttccattgttgcacgccaaccttgcatagatga 203
>gb|AW691981.1|AW691981 NF046C12ST1F1000 Developing stem Medicago truncatula cDNA clone
NF046C12ST 5', mRNA sequence
Length = 661
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 194 gcatcttccattgttgcacgccaaccttgcatagatga 157
>gb|AW207972.2|AW207972 M110993e DSIR Medicago truncatula cDNA clone IR26, mRNA sequence
Length = 391
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 168 gcatcttccattgttgcacgccaaccttgcatagatga 131
>gb|AW683499.2|AW683499 NF015A07LF1F1052 Developing leaf Medicago truncatula cDNA clone
NF015A07LF 5', mRNA sequence
Length = 370
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 222 gcatcttccattgttgcacgccaaccttgcatagatga 185
>gb|BQ147738.1|BQ147738 NF046B10FL1F1080 Developing flower Medicago truncatula cDNA clone
NF046B10FL 5', mRNA sequence
Length = 717
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 185 gcatcttccattgttgcacgccaaccttgcatagatga 148
>gb|AJ502181.1|AJ502181 AJ502181 MTAMP Medicago truncatula cDNA clone mtgmadc120017d05, mRNA
sequence
Length = 476
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 228 gcatcttccattgttgcacgccaaccttgcatagatga 191
>gb|CX525215.1|CX525215 s13dNF20G08AT068_479064 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 551
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 228 gcatcttccattgttgcacgccaaccttgcatagatga 191
>gb|DW019174.1|DW019174 EST1228135 MTY Medicago truncatula cDNA clone MTYBF79, mRNA sequence
Length = 725
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1479 gcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 250 gcatcttccattgttgcacgccaaccttgcatagatga 213
>gb|BF648487.1|BF648487 NF048A08EC1F1056 Elicited cell culture Medicago truncatula cDNA clone
NF048A08EC 5', mRNA sequence
Length = 560
Score = 50.1 bits (25), Expect = 6e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1208 aatcaatccttctatcataccactaaacttgtttattttgtctcc 1252
|||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 556 aatcaacccttctatcatcccactgaacttgtttatcttatctcc 512
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1413 cctccatgaccatcaaaaacaccaaagaatg 1443
||||||||||||||| |||||||||| ||||
Sbjct: 351 cctccatgaccatcataaacaccaaaaaatg 321
Score = 44.1 bits (22), Expect = 0.036
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1475 atgagcatcttccatggttgctcgccatccttgcatagatga 1516
||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 289 atgagcatcttccattgatgcacgccagccttgcattgatga 248
>gb|BG450097.1|BG450097 NF015C01DT1F1004 Drought Medicago truncatula cDNA clone NF015C01DT
5', mRNA sequence
Length = 460
Score = 50.1 bits (25), Expect = 6e-004
Identities = 82/101 (81%)
Strand = Plus / Minus
Query: 988 caagctctggtttgtggtccctcgataaattgtatgccttcccaccccttgaaataacac 1047
||||||| |||||||| || || |||||||||||||||| ||| ||| || || || |
Sbjct: 297 caagctcaggtttgtgatctctagataaattgtatgcctgaccattcctagatattacgc 238
Query: 1048 atcgggaatcaccagcatttgccacaacaagttgggtgttt 1088
| || |||||||||||||| || |||| |||| || |||||
Sbjct: 237 agcgtgaatcaccagcattcgcaacaaaaagtaggttgttt 197
>gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula cDNA clone mtgmacc120014a04, mRNA
sequence
Length = 458
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1574 agtacctgcccgggcggccgctcga 1598
|||||||||||||||||||||||||
Sbjct: 299 agtacctgcccgggcggccgctcga 323
>gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula cDNA clone mtgmacc120014h08, mRNA
sequence
Length = 164
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1575 gtacctgcccgggcggccgctcgaa 1599
|||||||||||||||||||||||||
Sbjct: 45 gtacctgcccgggcggccgctcgaa 21
>gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula cDNA clone mtgmacc120017g10, mRNA
sequence
Length = 406
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1575 gtacctgcccgggcggccgctcgaa 1599
|||||||||||||||||||||||||
Sbjct: 290 gtacctgcccgggcggccgctcgaa 314
>gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula cDNA clone mtgmacc120019d05, mRNA
sequence
Length = 591
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1574 agtacctgcccgggcggccgctcga 1598
|||||||||||||||||||||||||
Sbjct: 340 agtacctgcccgggcggccgctcga 316
>gb|CX531457.1|CX531457 s13dNF34E04MJ024_256864 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 629
Score = 50.1 bits (25), Expect = 6e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1044 acacatcgggaatcaccagcatttgccacaacaagtt 1080
||||||| ||||||||||||||||| ||||||||||
Sbjct: 623 acacatctagaatcaccagcatttgcaacaacaagtt 587
Score = 44.1 bits (22), Expect = 0.036
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1265 ttctcgccaacctctctgtccttgcatcatttcatccattctgaagaaag 1314
||||| ||| ||||| ||||| ||||||| ||||||||||||| |||||
Sbjct: 402 ttctctccaccctctttgtccacgcatcatctcatccattctgaggaaag 353
>gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 roots Medicago truncatula cDNA clone
MtGmEs470, mRNA sequence
Length = 1151
Score = 50.1 bits (25), Expect = 6e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1575 gtacctgcccgggcggccgctcgaa 1599
|||||||||||||||||||||||||
Sbjct: 297 gtacctgcccgggcggccgctcgaa 273
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03, mRNA
sequence
Length = 614
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1575 gtacctgcccgggcggccgctcga 1598
||||||||||||||||||||||||
Sbjct: 204 gtacctgcccgggcggccgctcga 227
>gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs361, mRNA sequence
Length = 593
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1575 gtacctgcccgggcggccgctcga 1598
||||||||||||||||||||||||
Sbjct: 24 gtacctgcccgggcggccgctcga 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 414,636
Number of Sequences: 392609
Number of extensions: 414636
Number of successful extensions: 29868
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29588
Number of HSP's gapped (non-prelim): 270
length of query: 1599
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1579
effective length of database: 433,880,813
effective search space: 685097803727
effective search space used: 685097803727
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)