BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521462.2.2
(1311 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula g... 125 1e-026
emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A1... 125 1e-026
gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula c... 125 1e-026
emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17... 117 2e-024
gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Med... 117 2e-024
gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating ... 96 9e-018
gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Med... 94 4e-017
gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula c... 94 4e-017
gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved l... 86 9e-015
gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cD... 84 3e-014
gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower M... 80 5e-013
gb|AC146572.11| Medicago truncatula clone mth2-104c10, comp... 78 2e-012
gb|BI272777.1|BI272777 NF092B03FL1F1028 Developing flower M... 60 5e-007
gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula ... 58 2e-006
gb|BF640668.1|BF640668 NF032H03IN1F1031 Insect herbivory Me... 52 1e-004
gb|BE315920.2|BE315920 NF028C07LF1F1050 Developing leaf Med... 48 0.002
emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A1... 42 0.12
gb|AC121244.13| Medicago truncatula clone mth2-31b9, comple... 40 0.46
>gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula genomic clone 75B7, DNA sequence
Length = 906
Score = 125 bits (63), Expect = 1e-026
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 412 gaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatt 471
||||| ||||| ||||| ||||||||||||||||||||||| || || || || |||||
Sbjct: 578 gaaacagacagtgaagagtcagatgtgagtggttctgatggagaggacacatcttggatc 519
Query: 472 tcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacata 531
||||||||||| | | | || ||||| || || ||||||||||||||||| |||||
Sbjct: 518 tcatggttctgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatc 459
Query: 532 caagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgcactt 591
|||||||| |||||||| ||||| | |||| |||||| || || ||||| ||||| |||
Sbjct: 458 caagatgacttcaacctttgtggattgagcagccaagtgccttactatgattatgctctt 399
Query: 592 gatctgatattagatgttgaatcttcccatggtga 626
||| |||| || ||||||||||| || ||||||||
Sbjct: 398 gatttgattttggatgttgaatcctctcatggtga 364
Score = 42.1 bits (21), Expect = 0.12
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 622 ggtgatatgttgacagaagagcaaaatgaacttattgaatcagctgctgagatgctctat 681
||||||||||| ||||| || ||||| || | |||||||| || || |||||||| |||
Sbjct: 148 ggtgatatgttcacagaggaacaaaacgagttaattgaatcggcagcagagatgctttat 89
Query: 682 ggattgattcatg 694
|| |||||||||
Sbjct: 88 ggtatgattcatg 76
>emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 560
Score = 125 bits (63), Expect = 1e-026
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 412 gaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatt 471
||||| ||||| ||||| ||||||||||||||||||||||| || || || || |||||
Sbjct: 343 gaaacagacagtgaagagtcagatgtgagtggttctgatggagaggacacatcttggatc 284
Query: 472 tcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacata 531
||||||||||| | | | || ||||| || || ||||||||||||||||| |||||
Sbjct: 283 tcatggttctgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatc 224
Query: 532 caagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgcactt 591
|||||||| |||||||| ||||| | |||| |||||| || || ||||| ||||| |||
Sbjct: 223 caagatgacttcaacctttgtggattgagcagccaagtgccttactatgattatgctctt 164
Query: 592 gatctgatattagatgttgaatcttcccatggtga 626
||| |||| || ||||||||||| || ||||||||
Sbjct: 163 gatttgattttggatgttgaatcctctcatggtga 129
>gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula cDNA clone MTUS-37D6, mRNA
sequence
Length = 813
Score = 125 bits (63), Expect = 1e-026
Identities = 358/455 (78%), Gaps = 1/455 (0%)
Strand = Plus / Minus
Query: 496 aatgaatttttctgtgaggttgatgatgactacatacaagatgatttcaacctctgtggg 555
|||||||| || ||||||||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct: 738 aatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgtgtt 679
Query: 556 ctaagcaaccaagttccatattatgactatgcacttgatctgatattagatgttgaatct 615
| |||| ||||| || |||||||| ||||| |||||| | || || |||||||| ||
Sbjct: 678 -tgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgagtcc 620
Query: 616 tcccatggtgatatgttgacagaagagcaaaatgaacttattgaatcagctgctgagatg 675
||||||||||| ||||| || || || |||||||| | || |||||||| || ||||||
Sbjct: 619 tcccatggtgacatgtttaccgaggaacaaaatgagttaatcgaatcagcagcggagatg 560
Query: 676 ctctatggattgattcatgttcggtatattattacaagtaaagggctgtccgcaatgctg 735
|| ||||| ||||||||| || ||||| | || || ||||| ||| | || ||||||
Sbjct: 559 ctttatggtatgattcatgcccgttatatattgaccagcaaaggactggctgccatgctg 500
Query: 736 gataagtacaggaacgttgagttcggcagatgccctcgagtgaattgcagcggccaacca 795
|| ||||||| |||| ||| ||||| |||||||| |||| | ||| ||| |||||
Sbjct: 499 gacaagtacaagaactatgacttcggtagatgcccaagagtttactgctccggacaacct 440
Query: 796 tgccttcctgttgggcaatcggatgttcctcgttcaagtacggtgaagatttactgccct 855
|||||||| ||||| || || || ||||| | || || || |||||||| || |||||
Sbjct: 439 tgccttccagttggccagtccgacattcctaggtctagcactgtgaagatatattgcccg 380
Query: 856 agatgtgaagacatctacactccaagatccaaatatctaagcaacatcgacgggacttac 915
|| ||||||||||| ||| ||| | ||||| |||| | |||||||||||||| ||||
Sbjct: 379 aggtgtgaagacatttactatcctcggtccaagtatcaaggcaacatcgacggggcttat 320
Query: 916 tttgggacaacattcccccacttgttcctgatgac 950
||||| || ||||| || ||| |||| ||||||||
Sbjct: 319 tttggtactacatttcctcacctgttgctgatgac 285
>emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 626
Score = 117 bits (59), Expect = 2e-024
Identities = 176/215 (81%)
Strand = Plus / Minus
Query: 412 gaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatt 471
||||| ||||| ||||| || |||||||||||||||||||| || || || || |||||
Sbjct: 511 gaaacagacagtgaagagtcggatgtgagtggttctgatggagaggacacatcttggatc 452
Query: 472 tcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacata 531
||||||||||| | | | || ||||| || || ||||||||||||||||| |||||
Sbjct: 451 tcatggttctgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatc 392
Query: 532 caagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgcactt 591
|||||||| |||||||| ||||| | |||| |||||| || || ||||| ||||| |||
Sbjct: 391 caagatgacttcaacctttgtggattgagcagccaagtgccttactatgattatgctctt 332
Query: 592 gatctgatattagatgttgaatcttcccatggtga 626
||| |||| || ||||||||||| || ||||||||
Sbjct: 331 gatttgattttggatgttgaatcctctcatggtga 297
>gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Medicago truncatula cDNA clone
NF020A01RT 5', mRNA sequence
Length = 390
Score = 117 bits (59), Expect = 2e-024
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 412 gaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatt 471
||||| ||||| ||||| ||||||||||||||||||||||| || || || || |||||
Sbjct: 21 gaaacagacagtgaagagtcagatgtgagtggttctgatggagaggacacatcttggatc 80
Query: 472 tcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacata 531
||||||||||| | | | || ||||| || || ||||||||||||||||| |||||
Sbjct: 81 tcatggttctgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatc 140
Query: 532 caagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgcactt 591
|||||||| |||||||| ||||| | |||| |||||| || || ||||| ||||| |||
Sbjct: 141 caagatgacttcaacctttgtggattgagcagccaagtgccttactatgattatgctctt 200
Query: 592 gatctgatattagatgttgaatc 614
||| |||| || |||||||||||
Sbjct: 201 gatttgattttggatgttgaatc 223
>gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 620
Score = 95.6 bits (48), Expect = 9e-018
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 412 gaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatt 471
||||| ||||| ||||| || |||||||||||||||||||| || || || || |||||
Sbjct: 430 gaaacagacagtgaagagtcggatgtgagtggttctgatggagaggacacatcttggatc 489
Query: 472 tcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacata 531
||||||||||| | | | || ||||| || || ||||||||||||||||| |||||
Sbjct: 490 tcatggttctgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatc 549
Query: 532 caagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgcactt 591
|||||||| |||||||| ||||| | |||| |||||| || || ||||| ||||| |||
Sbjct: 550 caagatgacttcaacctttgtggattgagcagccaagtgccttactatgattatgctctt 609
Query: 592 gatctgat 599
||| ||||
Sbjct: 610 gatttgat 617
>gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Medicago truncatula cDNA clone
NF089F06LF 5', mRNA sequence
Length = 638
Score = 93.7 bits (47), Expect = 4e-017
Identities = 220/278 (79%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| ||||| ||||| ||||| || ||||| |||||||| || || || ||||| ||
Sbjct: 354 gaatctgaaacggacagtgaagagtctgatgttagtggttccgacggtgatgatacatct 413
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| || | || | || |||||||| || ||||||||||| |||||
Sbjct: 414 tggatctcgtggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgat 473
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| ||||| || ||||| | |||| ||||| || |||||||| |||
Sbjct: 474 tacatccaagatgacttcaatctgtgtggtttgagcagtcaagtgccttattatgattat 533
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
|| |||||| | || || |||||||| || ||||||||||| ||||| || || || |||
Sbjct: 534 gctcttgatttaattttggatgttgagtcctcccatggtgacatgtttaccgaggaacaa 593
Query: 646 aatgaacttattgaatcagctgctgagatgctctatgg 683
||||| | || |||||| | || |||||||| |||||
Sbjct: 594 aatgagttaatcgaatcancagcggagatgctttatgg 631
>gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula cDNA clone MTYB854, mRNA
sequence
Length = 792
Score = 93.7 bits (47), Expect = 4e-017
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 496 aatgaatttttctgtgaggttgatgatgactacatacaagatgatttcaacctctgtggg 555
|||||||| || ||||||||||| ||||| ||||| |||||||| ||||| || |||||
Sbjct: 462 aatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgtggt 521
Query: 556 ctaagcaaccaagttccatattatgactatgcacttgatctgatattagatgttgaatct 615
| |||| ||||| || |||||||| ||||| |||||| | || || |||||||| ||
Sbjct: 522 ttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgagtcc 581
Query: 616 tcccatggtgatatgttgacagaagagcaaaatgaacttattgaatcagctgctgagatg 675
||||||||||| ||||| || || || |||||||| | || ||||||| || ||||||
Sbjct: 582 tcccatggtgacatgtttaccgaggaacaaaatgagttaatcgaatcagtagcggagatg 641
Query: 676 ctctatggattgattcatg 694
|| ||||| |||||||||
Sbjct: 642 ctttatggtatgattcatg 660
>gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved leaf Medicago truncatula cDNA
clone NF091D01PL 5', mRNA sequence
Length = 582
Score = 85.7 bits (43), Expect = 9e-015
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| ||||| ||||| ||||| || ||||| |||||||| || || || ||||| ||
Sbjct: 351 gaatctgaaacggacagtgaagagtctgatgttagtggttccgacggtgatgatacatct 410
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| || | || | || |||||||| || ||||||||||| |||||
Sbjct: 411 tggatctcgtggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgat 470
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| ||||| || ||||| | |||| ||||| || |||||||| |||
Sbjct: 471 tacatccaagatgacttcaatctgtgtggtttgagcagtcaagtgccttattatgattat 530
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgtt 632
|| |||||| | || || |||||||| || ||||||||||| |||||
Sbjct: 531 gctcttgatttaattttggatgttgagtcctcccatggtgacatgtt 577
>gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cDNA clone pKV1-18I24, mRNA
sequence
Length = 566
Score = 83.8 bits (42), Expect = 3e-014
Identities = 180/226 (79%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| ||||| ||||| ||||| || ||||| |||||||| || || || ||||| ||
Sbjct: 329 gaatctgaaacggacagtgaagagtctgatgttagtggttccgacggtgatgatacatct 388
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| || | || | || |||||||| || ||||||||||| |||||
Sbjct: 389 tggatctcgtggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgat 448
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| ||||| || ||||| | |||| ||||| || |||||||| |||
Sbjct: 449 tacatccaagatgacttcaatctgtgtggtttgagcagtcaagtgccttattatgattat 508
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgt 631
|| |||||| | || || |||||||| || ||||||||||| ||||
Sbjct: 509 gctcttgatttaattttggatgttgagtcctcccatggtgacatgt 554
>gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF107D02FL 5', mRNA sequence
Length = 619
Score = 79.8 bits (40), Expect = 5e-013
Identities = 180/227 (79%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| ||||| ||||| ||||| || ||||| |||||||| || || || ||||| ||
Sbjct: 370 gaatctgaaacggacagtgaagagtctgatgttagtggttccgacggtgatgatacatct 429
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| || | || | || |||||||| || ||||||||||| |||||
Sbjct: 430 tggatctcgtggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgat 489
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| ||||| || ||||| | |||| ||||| || |||||||| |||
Sbjct: 490 tacatccaagatgacttcaatctgtgtggtttgagcagtcaagtgccttattatgattat 549
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgtt 632
|| |||||| | || || |||||||| || | ||||||||| |||||
Sbjct: 550 gctcttgatttaattttggatgttgagtcctnccatggtgacatgtt 596
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
Length = 109548
Score = 77.8 bits (39), Expect = 2e-012
Identities = 174/219 (79%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| ||||| ||||| ||||| || ||||| |||||||| || || || ||||| ||
Sbjct: 86231 gaatctgaaacggacagtgaagagtctgatgttagtggttccgacggtgatgatacatct 86290
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| || | || | || |||||||| || ||||||||||| |||||
Sbjct: 86291 tggatctcgtggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgat 86350
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| ||||| || ||||| | |||| ||||| || |||||||| |||
Sbjct: 86351 tacatccaagatgacttcaatctgtgtggtttgagcagtcaagtgccttattatgattat 86410
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggt 624
|| |||||| | || || |||||||| || |||||||||
Sbjct: 86411 gctcttgatttaattttggatgttgagtcctcccatggt 86449
Score = 40.1 bits (20), Expect = 0.46
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 899 acatcgacgggacttactttgggacaacattcccccacttgttcctgatgac 950
||||||||||| |||| ||||| || ||||| || ||| |||| ||||||||
Sbjct: 88157 acatcgacggggcttattttggtactacatttcctcacctgttgctgatgac 88208
>gb|BI272777.1|BI272777 NF092B03FL1F1028 Developing flower Medicago truncatula cDNA clone
NF092B03FL 5', mRNA sequence
Length = 587
Score = 60.0 bits (30), Expect = 5e-007
Identities = 111/137 (81%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 412 gaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtggatt 471
||||| ||||| ||||| || |||||||||||||||||||| || || || || |||||
Sbjct: 451 gaaacagacagtgaagagtcggatgtgagtggttctgatggagaggacacatcttggatc 510
Query: 472 tcatgg-ttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgactacat 530
|||||| ||||| | | | || ||||| || || ||||||| ||||||||| |||||
Sbjct: 511 tcatgggttctgcaatctcagaggaaatgagttcttttgtgaggntgatgatgattacat 570
Query: 531 acaagatgatttcaacc 547
|||||||| |||||||
Sbjct: 571 ccaagatgacttcaacc 587
>gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula cDNA clone mt--acc955211g03,
mRNA sequence
Length = 551
Score = 58.0 bits (29), Expect = 2e-006
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 838 gtgaagatttactgccctagatgtgaagacatctacactccaagatccaaatatctaagc 897
|||||||| || ||||| || ||||||||||| ||| ||| | ||||| |||| | ||
Sbjct: 76 gtgaagatatattgcccgaggtgtgaagacatttactatcctcggtccaagtatcaaggc 135
Query: 898 aacatcgacgggacttactttgggacaacattcccccacttgttcctgatgac 950
|||||||||||| |||| ||||| || ||||| || ||| |||| ||||||||
Sbjct: 136 aacatcgacggggcttattttggtactacatttcctcacctgttgctgatgac 188
>gb|BF640668.1|BF640668 NF032H03IN1F1031 Insect herbivory Medicago truncatula cDNA clone
NF032H03IN 5', mRNA sequence
Length = 546
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 496 aatgaatttttctgtgaggttgatgatgactacatacaagatgatttcaa 545
|||||||| || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 489 aatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaa 538
>gb|BE315920.2|BE315920 NF028C07LF1F1050 Developing leaf Medicago truncatula cDNA clone
NF028C07LF 5', mRNA sequence
Length = 467
Score = 48.1 bits (24), Expect = 0.002
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 413 aaactgacagcgaagaatcagatgtgagtggttctgatgg 452
|||| ||||| ||||| || ||||||||||||||||||||
Sbjct: 415 aaacagacagtgaagagtcggatgtgagtggttctgatgg 454
>emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 42.1 bits (21), Expect = 0.12
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 622 ggtgatatgttgacagaagagcaaaatgaacttattgaatcagctgctgagatgctctat 681
||||||||||| ||||| || ||||| || | |||||||| || || |||||||| |||
Sbjct: 92 ggtgatatgttcacagaggaacaaaacgagttaattgaatcggcagcagagatgctttat 151
Query: 682 ggattgattcatg 694
|| |||||||||
Sbjct: 152 ggtatgattcatg 164
>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence
Length = 146189
Score = 40.1 bits (20), Expect = 0.46
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1021 aagccatgacaaatttgaag 1040
||||||||||||||||||||
Sbjct: 67967 aagccatgacaaatttgaag 67986
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 288,968
Number of Sequences: 392609
Number of extensions: 288968
Number of successful extensions: 19617
Number of sequences better than 0.5: 18
Number of HSP's better than 0.5 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19574
Number of HSP's gapped (non-prelim): 42
length of query: 1311
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1291
effective length of database: 433,880,813
effective search space: 560140129583
effective search space used: 560140129583
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)