BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478398.2.5
(1385 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula c... 248 1e-063
gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula g... 163 5e-038
emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A1... 163 5e-038
emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17... 155 1e-035
gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Med... 155 1e-035
gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating ... 131 2e-028
gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Med... 119 7e-025
gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula c... 117 3e-024
gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula ... 100 6e-019
gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower M... 98 2e-018
gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved l... 96 1e-017
gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cD... 94 4e-017
gb|AC146572.11| Medicago truncatula clone mth2-104c10, comp... 94 4e-017
emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A1... 72 1e-010
emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A1... 70 5e-010
gb|BI272777.1|BI272777 NF092B03FL1F1028 Developing flower M... 66 9e-009
emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A1... 64 3e-008
>gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula cDNA clone MTUS-37D6, mRNA
sequence
Length = 813
Score = 248 bits (125), Expect = 1e-063
Identities = 414/509 (81%), Gaps = 1/509 (0%)
Strand = Plus / Minus
Query: 423 tggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgac 482
||||| || |||| |||||| || ||||| ||||| ||||| ||||| || || |||||
Sbjct: 768 tggatctcgtggttttgcaatttgagaggaaatgaattcttttgtgaggttgacgatgat 709
Query: 483 tacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatgattat 542
||||| ||||| |||||||| || |||| | ||||| ||||| |||||||||||||||
Sbjct: 708 tacatccaagatgacttcaatctgtgtgtt-tgagcagtcaagtgccttattatgattat 650
Query: 543 gctctcgatctcattttagatattgaatcatctcatggtgatatgttcactgaggaacaa 602
||||| ||| | ||||| ||| |||| || || |||||||| ||||| || |||||||||
Sbjct: 649 gctcttgatttaattttggatgttgagtcctcccatggtgacatgtttaccgaggaacaa 590
Query: 603 aatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacgatacatt 662
|||||| | |||||||| || |||||||||||||| |||| ||||| || || ||
Sbjct: 589 aatgagttaatcgaatcagcagcggagatgctttatggtatgattcatgcccgttatata 530
Query: 663 ctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgactttgggcgg 722
||||||| |||||||||||||| |||||||| ||||| |||||||||||||| || |
Sbjct: 529 ttgaccagcaaaggactggctgccatgctggacaagtacaagaactatgacttcggtaga 470
Query: 723 tgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcagacatccat 782
||||| | |||||||||| || ||||| ||||| |||||||| || || ||||| | |
Sbjct: 469 tgcccaagagtttactgctccggacaaccttgccttccagttggccagtccgacattcct 410
Query: 783 cgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactacccacggtcc 842
| ||||| || ||||||||||| ||||| | |||||||||||| ||||| || ||||||
Sbjct: 409 aggtctagcactgtgaagatatattgcccgaggtgtgaagacatttactatcctcggtcc 350
Query: 843 aagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctg 902
||||| ||||||||||||||||| || || ||||| || || || ||||| ||||| |||
Sbjct: 349 aagtatcaaggcaacatcgacggggcttattttggtactacatttcctcacctgttgctg 290
Query: 903 atgacatacgagcacctcaagccacagaa 931
||||| || | || || |||||||||||
Sbjct: 289 atgacttatggacaactgaagccacagaa 261
>gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula genomic clone 75B7, DNA sequence
Length = 906
Score = 163 bits (82), Expect = 5e-038
Identities = 175/206 (84%)
Strand = Plus / Minus
Query: 378 agtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtat 437
||||||| |||||||| ||||| ||||||||||| ||||| || ||||| |||||||
Sbjct: 569 agtgaagagtcagatgtgagtggttctgatggagaggacacatcttggatctcatggttc 510
Query: 438 tgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgac 497
||||| | ||||| ||||||||||| ||||| || |||||||| ||||| ||||| |||
Sbjct: 509 tgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatccaagatgac 450
Query: 498 ttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatt 557
|||||||||||||| | ||||||||||| ||||| |||||||||||||| ||| | |||
Sbjct: 449 ttcaacctttgtggattgagcagccaagtgccttactatgattatgctcttgatttgatt 390
Query: 558 ttagatattgaatcatctcatggtga 583
|| ||| ||||||| |||||||||||
Sbjct: 389 ttggatgttgaatcctctcatggtga 364
Score = 69.9 bits (35), Expect = 5e-010
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
|||||||||||||| ||||||||||| ||| | ||||| || |||||||||||||||
Sbjct: 148 ggtgatatgttcacagaggaacaaaacgagttaattgaatcggcagcagagatgctttat 89
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgc 685
|| |||| ||||| |||||||| |||| || |||||| |||||||
Sbjct: 88 ggtatgattcatgcgcgatacatattgacaagcaaaggaatggctgc 42
>emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 560
Score = 163 bits (82), Expect = 5e-038
Identities = 175/206 (84%)
Strand = Plus / Minus
Query: 378 agtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtat 437
||||||| |||||||| ||||| ||||||||||| ||||| || ||||| |||||||
Sbjct: 334 agtgaagagtcagatgtgagtggttctgatggagaggacacatcttggatctcatggttc 275
Query: 438 tgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgac 497
||||| | ||||| ||||||||||| ||||| || |||||||| ||||| ||||| |||
Sbjct: 274 tgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatccaagatgac 215
Query: 498 ttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatt 557
|||||||||||||| | ||||||||||| ||||| |||||||||||||| ||| | |||
Sbjct: 214 ttcaacctttgtggattgagcagccaagtgccttactatgattatgctcttgatttgatt 155
Query: 558 ttagatattgaatcatctcatggtga 583
|| ||| ||||||| |||||||||||
Sbjct: 154 ttggatgttgaatcctctcatggtga 129
>emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 626
Score = 155 bits (78), Expect = 1e-035
Identities = 165/194 (85%)
Strand = Plus / Minus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||| ||||| ||||||||||| ||||| || ||||| ||||||| ||||| | |||
Sbjct: 490 gatgtgagtggttctgatggagaggacacatcttggatctcatggttctgcaatctcaga 431
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||||
Sbjct: 430 ggaaatgagttcttttgtgaggttgatgatgattacatccaagatgacttcaacctttgt 371
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||||||||| ||||| |||||||||||||| ||| | ||||| ||| |||||
Sbjct: 370 ggattgagcagccaagtgccttactatgattatgctcttgatttgattttggatgttgaa 311
Query: 570 tcatctcatggtga 583
|| |||||||||||
Sbjct: 310 tcctctcatggtga 297
>gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Medicago truncatula cDNA clone
NF020A01RT 5', mRNA sequence
Length = 390
Score = 155 bits (78), Expect = 1e-035
Identities = 171/202 (84%)
Strand = Plus / Plus
Query: 378 agtgaagcatcagatgttagtggctctgatggagaagacacctcgtggatttcatggtat 437
||||||| |||||||| ||||| ||||||||||| ||||| || ||||| |||||||
Sbjct: 30 agtgaagagtcagatgtgagtggttctgatggagaggacacatcttggatctcatggttc 89
Query: 438 tgcaacttaagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgac 497
||||| | ||||| ||||||||||| ||||| || |||||||| ||||| ||||| |||
Sbjct: 90 tgcaatctcagaggaaatgagttcttttgtgaggttgatgatgattacatccaagatgac 149
Query: 498 ttcaacctttgtggcctcagcagccaagttccttattatgattatgctctcgatctcatt 557
|||||||||||||| | ||||||||||| ||||| |||||||||||||| ||| | |||
Sbjct: 150 ttcaacctttgtggattgagcagccaagtgccttactatgattatgctcttgatttgatt 209
Query: 558 ttagatattgaatcatctcatg 579
|| ||| ||||||| |||||||
Sbjct: 210 ttggatgttgaatcctctcatg 231
Score = 75.8 bits (38), Expect = 9e-012
Identities = 114/138 (82%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||| || ||||||||||||||||| |||| ||||| |||||||| |||| || |||
Sbjct: 252 gaatcggcagcagagatgctttatggtatgattcatgcgcgatacatattgacaagcaaa 311
Query: 675 ggactggctgcaatg-ctggagaagtataagaactatgactttgggcggtgcccgcgtgt 733
||| ||||||| ||| || || ||||| ||||||||||||||||| | ||||| | ||
Sbjct: 312 ggaatggctgctatgccttgacaagtacaagaactatgactttggtagatgcccaagagt 371
Query: 734 ttactgctgtggtcaacc 751
|||||||| ||| |||||
Sbjct: 372 ttactgctctggacaacc 389
>gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 620
Score = 131 bits (66), Expect = 2e-028
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||| ||||| ||||||||||| ||||| || ||||| ||||||| ||||| | |||
Sbjct: 451 gatgtgagtggttctgatggagaggacacatcttggatctcatggttctgcaatctcaga 510
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||||
Sbjct: 511 ggaaatgagttcttttgtgaggttgatgatgattacatccaagatgacttcaacctttgt 570
Query: 510 ggcctcagcagccaagttccttattatgattatgctct 547
|| | ||||||||||| ||||| ||||||||||||||
Sbjct: 571 ggattgagcagccaagtgccttactatgattatgctct 608
>gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Medicago truncatula cDNA clone
NF089F06LF 5', mRNA sequence
Length = 638
Score = 119 bits (60), Expect = 7e-025
Identities = 203/251 (80%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || || || || || || || ||||| || |||| |||||| || |||
Sbjct: 381 gatgttagtggttccgacggtgatgatacatcttggatctcgtggttttgcaatttgaga 440
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||
Sbjct: 441 ggaaatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgt 500
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| ||||| |||||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 501 ggtttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgag 560
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| || |||||||| ||||| || ||||||||||||||| | |||||| | || |||
Sbjct: 561 tcctcccatggtgacatgtttaccgaggaacaaaatgagttaatcgaatcancagcggag 620
Query: 630 atgctttatgg 640
|||||||||||
Sbjct: 621 atgctttatgg 631
>gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula cDNA clone MTYB854, mRNA
sequence
Length = 792
Score = 117 bits (59), Expect = 3e-024
Identities = 203/251 (80%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || || || || || || || ||||| || |||| |||||| || |||
Sbjct: 399 gatgttagtggttccgacggtgatgatacatcttggatctcgtggttttgcaatttgaga 458
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||
Sbjct: 459 ggaaatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgt 518
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| ||||| |||||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 519 ggtttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgag 578
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| || |||||||| ||||| || ||||||||||||||| | ||||||| || |||
Sbjct: 579 tcctcccatggtgacatgtttaccgaggaacaaaatgagttaatcgaatcagtagcggag 638
Query: 630 atgctttatgg 640
|||||||||||
Sbjct: 639 atgctttatgg 649
Score = 63.9 bits (32), Expect = 3e-008
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 732 gtttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagt 791
|||||||||| || ||||| ||||| |||||||| || || ||||| | | | |||||
Sbjct: 668 gtttactgctccggacaaccttgccttccagttggccagtccgacattcctaggtctagc 727
Query: 792 accgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagta 847
|| |||| |||||| ||||| | |||||||||||| ||||| || |||||||||||
Sbjct: 728 actgtgaggatatattgcccgaggtgtgaagacatttactatcctcggtccaagta 783
>gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula cDNA clone mt--acc955211g03,
mRNA sequence
Length = 551
Score = 99.6 bits (50), Expect = 6e-019
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 786 tctagtaccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaag 845
||||| || ||||||||||| ||||| | |||||||||||| ||||| || |||||||||
Sbjct: 67 tctagcactgtgaagatatattgcccgaggtgtgaagacatttactatcctcggtccaag 126
Query: 846 taccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatg 905
|| ||||||||||||||||| || || ||||| || || || ||||| ||||| ||||||
Sbjct: 127 tatcaaggcaacatcgacggggcttattttggtactacatttcctcacctgttgctgatg 186
Query: 906 acatacgagcacctcaagccacagaa 931
|| || | || || |||||||||||
Sbjct: 187 acttatggacaactgaagccacagaa 212
>gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF107D02FL 5', mRNA sequence
Length = 619
Score = 97.6 bits (49), Expect = 2e-018
Identities = 178/220 (80%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || || || || || || || ||||| || |||| |||||| || |||
Sbjct: 397 gatgttagtggttccgacggtgatgatacatcttggatctcgtggttttgcaatttgaga 456
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||
Sbjct: 457 ggaaatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgt 516
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| ||||| |||||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 517 ggtttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgag 576
Query: 570 tcatctcatggtgatatgttca-ctgaggaacaaaatgag 608
|| | |||||||| ||||| | | |||||||||||||||
Sbjct: 577 tcctnccatggtgacatgtttacccgaggaacaaaatgag 616
>gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved leaf Medicago truncatula cDNA
clone NF091D01PL 5', mRNA sequence
Length = 582
Score = 95.6 bits (48), Expect = 1e-017
Identities = 162/200 (81%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || || || || || || || ||||| || |||| |||||| || |||
Sbjct: 378 gatgttagtggttccgacggtgatgatacatcttggatctcgtggttttgcaatttgaga 437
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||
Sbjct: 438 ggaaatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgt 497
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| ||||| |||||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 498 ggtttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgag 557
Query: 570 tcatctcatggtgatatgtt 589
|| || |||||||| |||||
Sbjct: 558 tcctcccatggtgacatgtt 577
>gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cDNA clone pKV1-18I24, mRNA
sequence
Length = 566
Score = 93.7 bits (47), Expect = 4e-017
Identities = 161/199 (80%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || || || || || || || ||||| || |||| |||||| || |||
Sbjct: 356 gatgttagtggttccgacggtgatgatacatcttggatctcgtggttttgcaatttgaga 415
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||
Sbjct: 416 ggaaatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgt 475
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| ||||| |||||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 476 ggtttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgag 535
Query: 570 tcatctcatggtgatatgt 588
|| || |||||||| ||||
Sbjct: 536 tcctcccatggtgacatgt 554
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
Length = 109548
Score = 93.7 bits (47), Expect = 4e-017
Identities = 137/167 (82%)
Strand = Plus / Plus
Query: 689 gctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtca 748
|||||| ||||| |||||||||||||| || | ||||| | |||||||||| || ||
Sbjct: 86787 gctggacaagtacaagaactatgacttcggtagatgcccaagagtttactgctccggaca 86846
Query: 749 accatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactg 808
||| ||||| |||||||| || || ||||| | | | ||||| || ||||||||||| ||
Sbjct: 86847 accttgccttccagttggccagtccgacattcctaggtctagcactgtgaagatatattg 86906
Query: 809 ccccaagtgtgaagacatctactacccacggtccaagtaccaaggca 855
||| | |||||||||||| ||||| || ||||||||||| |||||||
Sbjct: 86907 cccgaggtgtgaagacatttactatcctcggtccaagtatcaaggca 86953
Score = 87.7 bits (44), Expect = 2e-015
Identities = 155/192 (80%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || || || || || || || ||||| || |||| |||||| || |||
Sbjct: 86258 gatgttagtggttccgacggtgatgatacatcttggatctcgtggttttgcaatttgaga 86317
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||
Sbjct: 86318 ggaaatgaattcttttgtgaggttgacgatgattacatccaagatgacttcaatctgtgt 86377
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| ||||| |||||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 86378 ggtttgagcagtcaagtgccttattatgattatgctcttgatttaattttggatgttgag 86437
Query: 570 tcatctcatggt 581
|| || ||||||
Sbjct: 86438 tcctcccatggt 86449
Score = 61.9 bits (31), Expect = 1e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
||||| ||||| || ||||||||||||||| | |||||||| || ||||||||||||
Sbjct: 86589 ggtgacatgtttaccgaggaacaaaatgagttaatcgaatcagcagcggagatgctttat 86648
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgc 685
|| |||| ||||| || || || ||||||| ||||||||||||||
Sbjct: 86649 ggtatgattcatgcccgttatatattgaccagcaaaggactggctgc 86695
>emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 165
Score = 71.9 bits (36), Expect = 1e-010
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 696 aagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgc 755
||||| ||||||||||||||||| | ||||| | |||||||||| ||| ||||| ||
Sbjct: 6 aagtacaagaactatgactttggtagatgcccaagagtttactgctctggacaaccttgt 65
Query: 756 ctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaag 815
|| |||||||| || |||||||| | | | || ||||| ||||| ||||| ||||| | |
Sbjct: 66 cttccagttggtcagtcagacattcctaggtcaagtactgtgaaaatatattgccctagg 125
Query: 816 tgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||| | || || || ||||||||||| |||||||
Sbjct: 126 tgtgaagatctttattatcctcggtccaagtatcaaggca 165
>emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 69.9 bits (35), Expect = 5e-010
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 579 ggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttat 638
|||||||||||||| ||||||||||| ||| | ||||| || |||||||||||||||
Sbjct: 92 ggtgatatgttcacagaggaacaaaacgagttaattgaatcggcagcagagatgctttat 151
Query: 639 gggctgatccatgcacgatacattctgaccagtaaaggactggctgc 685
|| |||| ||||| |||||||| |||| || |||||| |||||||
Sbjct: 152 ggtatgattcatgcgcgatacatattgacaagcaaaggaatggctgc 198
Score = 63.9 bits (32), Expect = 3e-008
Identities = 128/160 (80%)
Strand = Plus / Plus
Query: 696 aagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgc 755
||||| ||||||||||||||||| | ||||| | |||||||||| ||| ||||| ||
Sbjct: 295 aagtacaagaactatgactttggtagatgcccaagagtttactgctctggacaaccttgt 354
Query: 756 ctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaag 815
|| |||||||| || || ||||| | | | || ||||| ||||| ||||| ||||| | |
Sbjct: 355 cttccagttggtcagtcggacattcctaggtcaagtactgtgaaaatatattgccctagg 414
Query: 816 tgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||| | || || || ||||||||||| |||||||
Sbjct: 415 tgtgaagatctttattatcctcggtccaagtatcaaggca 454
>gb|BI272777.1|BI272777 NF092B03FL1F1028 Developing flower Medicago truncatula cDNA clone
NF092B03FL 5', mRNA sequence
Length = 587
Score = 65.9 bits (33), Expect = 9e-009
Identities = 96/116 (82%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtat-tgcaacttaag 448
||||| ||||| ||||||||||| ||||| || ||||| |||||| | ||||| | ||
Sbjct: 472 gatgtgagtggttctgatggagaggacacatcttggatctcatgggttctgcaatctcag 531
Query: 449 agggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacc 504
||| ||||||||||| ||||| | |||||||| ||||| ||||| ||||||||||
Sbjct: 532 aggaaatgagttcttttgtgaggntgatgatgattacatccaagatgacttcaacc 587
>emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 805
Score = 63.9 bits (32), Expect = 3e-008
Identities = 128/160 (80%)
Strand = Plus / Plus
Query: 696 aagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatgc 755
||||| ||||||||||||||||| | ||||| | |||||||||| ||| ||||| ||
Sbjct: 56 aagtacaagaactatgactttggtagatgcccaagagtttactgctctggacaaccttgt 115
Query: 756 ctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaag 815
|| |||||||| || || ||||| | | | || ||||| ||||| ||||| ||||| | |
Sbjct: 116 cttccagttggtcagtcggacattcctaggtcaagtactgtgaaaatatattgccctagg 175
Query: 816 tgtgaagacatctactacccacggtccaagtaccaaggca 855
|||||||| | || || || ||||||||||| |||||||
Sbjct: 176 tgtgaagatctttattatcctcggtccaagtatcaaggca 215
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 305,017
Number of Sequences: 392609
Number of extensions: 305017
Number of successful extensions: 22974
Number of sequences better than 0.5: 18
Number of HSP's better than 0.5 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22932
Number of HSP's gapped (non-prelim): 31
length of query: 1385
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1365
effective length of database: 433,880,813
effective search space: 592247309745
effective search space used: 592247309745
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)