BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2477970.2.1
(699 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW684689.1|AW684689 NF019G08NR1F1000 Nodulated root Medi... 155 6e-036
gb|AW171676.2|AW171676 N100570e rootphos(-) Medicago trunca... 155 6e-036
gb|AL374600.1|AL374600 MtBB07E08F1 MtBB Medicago truncatula... 155 6e-036
gb|AL378239.1|AL378239 MtBB36H09F1 MtBB Medicago truncatula... 155 6e-036
gb|AL386526.1|AL386526 MtBC35B12F1 MtBC Medicago truncatula... 155 6e-036
gb|BE999055.1|BE999055 EST430778 GVSN Medicago truncatula c... 155 6e-036
gb|AW683445.2|AW683445 NF012D01LF1F1012 Developing leaf Med... 155 6e-036
gb|BG456415.1|BG456415 NF081C02PL1F1008 Phosphate starved l... 155 6e-036
gb|BG458138.1|BG458138 NF050D04PL1F1031 Phosphate starved l... 155 6e-036
gb|BG581433.1|BG581433 EST483167 GVN Medicago truncatula cD... 155 6e-036
gb|AJ501981.1|AJ501981 AJ501981 MTAMP Medicago truncatula c... 155 6e-036
gb|AJ497329.1|AJ497329 AJ497329 MTFLOW Medicago truncatula ... 155 6e-036
gb|AJ498400.1|AJ498400 AJ498400 MTPOSE Medicago truncatula ... 155 6e-036
gb|CA990121.1|CA990121 EST643629 GESD Medicago truncatula c... 155 6e-036
gb|CX532810.1|CX532810 s13dNF75A06MJ037_271902 Methyl Jasmo... 155 6e-036
gb|CX534096.1|CX534096 s13dNF0SA10MJ069_321953 Methyl Jasmo... 155 6e-036
gb|AC126783.31| Medicago truncatula clone mth2-15k17, WORKI... 155 6e-036
gb|AA660416.1|AA660416 00292 MtRHE Medicago truncatula cDNA... 149 4e-034
gb|AW775611.1|AW775611 EST334676 DSIL Medicago truncatula c... 149 4e-034
gb|AW683211.2|AW683211 NF009A04LF1F1024 Developing leaf Med... 149 4e-034
gb|AW683674.2|AW683674 NF017D09LF1F1077 Developing leaf Med... 149 4e-034
gb|CX524549.1|CX524549 s13dNF07C09AT068_448442 Aphid-Infect... 149 4e-034
gb|CX531736.1|CX531736 s13dNF81G06MJ040_257414 Methyl Jasmo... 149 4e-034
gb|AC147877.10| Medicago truncatula clone mth2-9b13, comple... 149 4e-034
gb|AJ388975.1|AJ388975 AJ388975 Medicago truncatula R108 Me... 147 1e-033
gb|AL381272.1|AL381272 MtBC019A02R1 MtBC Medicago truncatul... 147 1e-033
gb|AJ503521.1|AJ503521 AJ503521 MTAMP Medicago truncatula c... 147 1e-033
gb|AJ496957.1|AJ496957 AJ496957 MTFLOW Medicago truncatula ... 147 1e-033
gb|AW683275.2|AW683275 NF009H11LF1F1095 Developing leaf Med... 145 6e-033
gb|BG452486.1|BG452486 NF089H05LF1F1045 Developing leaf Med... 145 6e-033
gb|AJ846296.1|AJ846296 AJ846296 MtSCF Medicago truncatula c... 145 6e-033
gb|BF638832.1|BF638832 NF060D02PL1F1016 Phosphate starved l... 141 9e-032
gb|BI263915.1|BI263915 NF107B09PL1F1077 Phosphate starved l... 141 9e-032
gb|BF519530.1|BF519530 EST456994 DSIL Medicago truncatula c... 139 4e-031
gb|BE325110.2|BE325110 NF114E06ST1F1050 Developing stem Med... 139 4e-031
gb|CG967587.1|CG967587 MBEHD29TFB mth2 Medicago truncatula ... 135 6e-030
gb|AL375157.1|AL375157 MtBB11G01F1 MtBB Medicago truncatula... 133 2e-029
gb|BG583240.1|BG583240 EST484990 GVN Medicago truncatula cD... 133 2e-029
gb|BQ123811.1|BQ123811 EST609387 GLSD Medicago truncatula c... 133 2e-029
gb|BQ149755.1|BQ149755 NF108E03FL1F1022 Developing flower M... 127 1e-027
gb|BM779620.1|BM779620 EST590196 KV2 Medicago truncatula cD... 125 5e-027
gb|BI311270.1|BI311270 EST5313020 GESD Medicago truncatula ... 123 2e-026
gb|AW683559.2|AW683559 NF015H05LF1F1047 Developing leaf Med... 119 3e-025
gb|BI271455.1|BI271455 NF023A02FL1F1008 Developing flower M... 119 3e-025
gb|BQ122566.1|BQ122566 EST608142 GLSD Medicago truncatula c... 119 3e-025
gb|AJ846636.1|AJ846636 AJ846636 MtSN0 Medicago truncatula c... 105 5e-021
gb|AL373269.1|AL373269 MtBA56G10F1 MtBA Medicago truncatula... 92 7e-017
gb|CX530751.1|CX530751 s13dNF27E04MJ024_247517 Methyl Jasmo... 90 3e-016
gb|CG943721.1|CG943721 MBEBF59TF mth2 Medicago truncatula g... 82 7e-014
gb|AL378240.1|AL378240 MtBB36H09R1 MtBB Medicago truncatula... 82 7e-014
gb|AC146552.16| Medicago truncatula clone mth2-9d1, complet... 52 6e-005
gb|AL374601.1|AL374601 MtBB07E08R2 MtBB Medicago truncatula... 50 3e-004
gb|BQ154254.1|BQ154254 NF056F02IR1F1026 Irradiated Medicago... 50 3e-004
gb|AC152351.7| Medicago truncatula clone mth2-75b20, comple... 44 0.016
gb|AC153121.14| Medicago truncatula clone mth2-80o14, WORKI... 44 0.016
>gb|AW684689.1|AW684689 NF019G08NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF019G08NR 5', mRNA sequence
Length = 487
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 30 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 89
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 90 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 149
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 150 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 209
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 210 tttcacaagctccgtaacaaattcta 235
>gb|AW171676.2|AW171676 N100570e rootphos(-) Medicago truncatula cDNA clone MHRP-8E7, mRNA
sequence
Length = 535
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 23 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 82
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 83 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 142
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 143 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 202
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 203 tttcacaagctccgtaacaaattcta 228
>gb|AL374600.1|AL374600 MtBB07E08F1 MtBB Medicago truncatula cDNA clone MtBB07E08 T3, mRNA
sequence
Length = 496
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 30 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 89
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 90 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 149
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 150 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 209
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 210 tttcacaagctccgtaacaaattcta 235
>gb|AL378239.1|AL378239 MtBB36H09F1 MtBB Medicago truncatula cDNA clone MtBB36H09 T3, mRNA
sequence
Length = 345
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 17 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 76
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 77 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 136
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 137 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 196
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 197 tttcacaagctccgtaacaaattcta 222
>gb|AL386526.1|AL386526 MtBC35B12F1 MtBC Medicago truncatula cDNA clone MtBC35B12 T3, mRNA
sequence
Length = 479
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 24 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 83
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 84 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 143
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 144 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 203
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 204 tttcacaagctccgtaacaaattcta 229
>gb|BE999055.1|BE999055 EST430778 GVSN Medicago truncatula cDNA clone pGVSN-13P4, mRNA
sequence
Length = 539
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 27 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 86
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 87 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 146
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 147 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 206
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 207 tttcacaagctccgtaacaaattcta 232
>gb|AW683445.2|AW683445 NF012D01LF1F1012 Developing leaf Medicago truncatula cDNA clone
NF012D01LF 5', mRNA sequence
Length = 413
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 30 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 89
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 90 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 149
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 150 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 209
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 210 tttcacaagctccgtaacaaattcta 235
>gb|BG456415.1|BG456415 NF081C02PL1F1008 Phosphate starved leaf Medicago truncatula cDNA
clone NF081C02PL 5', mRNA sequence
Length = 575
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 31 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 90
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 91 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 150
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 151 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 210
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 211 tttcacaagctccgtaacaaattcta 236
>gb|BG458138.1|BG458138 NF050D04PL1F1031 Phosphate starved leaf Medicago truncatula cDNA
clone NF050D04PL 5', mRNA sequence
Length = 538
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 28 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 87
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 88 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 147
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 148 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 207
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 208 tttcacaagctccgtaacaaattcta 233
>gb|BG581433.1|BG581433 EST483167 GVN Medicago truncatula cDNA clone pGVN-64H14 5' end,
mRNA sequence
Length = 580
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 20 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 79
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 80 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 139
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 140 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 199
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 200 tttcacaagctccgtaacaaattcta 225
>gb|AJ501981.1|AJ501981 AJ501981 MTAMP Medicago truncatula cDNA clone mtgmadc120014b05,
mRNA sequence
Length = 495
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 54 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 113
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 114 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 173
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 174 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 233
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 234 tttcacaagctccgtaacaaattcta 259
>gb|AJ497329.1|AJ497329 AJ497329 MTFLOW Medicago truncatula cDNA clone mt--abc955107h05,
mRNA sequence
Length = 623
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 36 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 95
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 96 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 155
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 156 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 215
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 216 tttcacaagctccgtaacaaattcta 241
>gb|AJ498400.1|AJ498400 AJ498400 MTPOSE Medicago truncatula cDNA clone mt--acc955204d04,
mRNA sequence
Length = 482
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 37 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 96
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 97 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 156
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 157 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 216
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 217 tttcacaagctccgtaacaaattcta 242
>gb|CA990121.1|CA990121 EST643629 GESD Medicago truncatula cDNA clone GESD-27J13, mRNA
sequence
Length = 371
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 13 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 72
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 73 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 132
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 133 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 192
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 193 tttcacaagctccgtaacaaattcta 218
>gb|CX532810.1|CX532810 s13dNF75A06MJ037_271902 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 639
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 28 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 87
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 88 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 147
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 148 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 207
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 208 tttcacaagctccgtaacaaattcta 233
>gb|CX534096.1|CX534096 s13dNF0SA10MJ069_321953 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 612
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 28 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 87
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 88 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 147
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 148 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 207
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 208 tttcacaagctccgtaacaaattcta 233
>gb|AC126783.31| Medicago truncatula clone mth2-15k17, WORKING DRAFT SEQUENCE
Length = 117439
Score = 155 bits (78), Expect = 6e-036
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 6891 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 6950
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 6951 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 7010
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 7011 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 7070
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 7071 tttcacaagctccgtaacaaattcta 7096
>gb|AA660416.1|AA660416 00292 MtRHE Medicago truncatula cDNA 5' similar to 60S ribosomal
protein L29, mRNA sequence
Length = 720
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 35 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 94
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 95 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 154
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 155 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 214
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 215 ctttcacaagcttcgtaacaaattcta 241
>gb|AW775611.1|AW775611 EST334676 DSIL Medicago truncatula cDNA clone pDSIL-2I4, mRNA
sequence
Length = 454
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 10 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 69
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 70 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 129
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 130 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 189
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 190 ctttcacaagcttcgtaacaaattcta 216
>gb|AW683211.2|AW683211 NF009A04LF1F1024 Developing leaf Medicago truncatula cDNA clone
NF009A04LF 5', mRNA sequence
Length = 341
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 16 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 75
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 76 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 135
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 136 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 195
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 196 ctttcacaagcttcgtaacaaattcta 222
>gb|AW683674.2|AW683674 NF017D09LF1F1077 Developing leaf Medicago truncatula cDNA clone
NF017D09LF 5', mRNA sequence
Length = 568
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 33 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 92
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 93 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 152
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 153 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 212
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 213 ctttcacaagcttcgtaacaaattcta 239
>gb|CX524549.1|CX524549 s13dNF07C09AT068_448442 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 498
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 29 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 88
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 89 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 148
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 149 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 208
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 209 ctttcacaagcttcgtaacaaattcta 235
>gb|CX531736.1|CX531736 s13dNF81G06MJ040_257414 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 608
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Plus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 48 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 107
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 108 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 167
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 168 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 227
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 228 ctttcacaagcttcgtaacaaattcta 254
>gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete sequence
Length = 122251
Score = 149 bits (75), Expect = 4e-034
Identities = 174/207 (84%)
Strand = Plus / Minus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 106028 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 105969
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 105968 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcacca 105909
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| |||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||
Sbjct: 105908 ccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgcta 105849
Query: 229 cttccataagctccgcaacaagttcta 255
||| || ||||| || ||||| |||||
Sbjct: 105848 ctttcacaagcttcgtaacaaattcta 105822
>gb|AJ388975.1|AJ388975 AJ388975 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo348 similar to 60S ribosomal protein L29, mRNA
sequence
Length = 560
Score = 147 bits (74), Expect = 1e-033
Identities = 173/206 (83%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 27 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 86
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || || | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 87 cgtatcggaaaacatcgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 146
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 147 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 206
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 207 tttcacaagctccgtaacaaattcta 232
>gb|AL381272.1|AL381272 MtBC019A02R1 MtBC Medicago truncatula cDNA clone MtBC019A0 T7, mRNA
sequence
Length = 495
Score = 147 bits (74), Expect = 1e-033
Identities = 164/194 (84%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | ||||||||||||||||| ||||| ||||| || ||||| ||
Sbjct: 5 ttcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggtcgtatcggaaaa 64
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||
Sbjct: 65 caccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctc 124
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||||||||||| || ||||||
Sbjct: 125 ttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttactttcacaagctc 184
Query: 242 cgcaacaagttcta 255
|| ||||| |||||
Sbjct: 185 cgtaacaaattcta 198
>gb|AJ503521.1|AJ503521 AJ503521 MTAMP Medicago truncatula cDNA clone mtgmadc120035b02,
mRNA sequence
Length = 552
Score = 147 bits (74), Expect = 1e-033
Identities = 173/206 (83%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || ||| |||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 39 atgacaacccgattcgagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 98
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 99 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 158
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 159 catcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 218
Query: 230 ttccataagctccgcaacaagttcta 255
|| || |||||||| ||||| |||||
Sbjct: 219 tttcacaagctccgtaacaaattcta 244
>gb|AJ496957.1|AJ496957 AJ496957 MTFLOW Medicago truncatula cDNA clone mt--abc955102c06,
mRNA sequence
Length = 567
Score = 147 bits (74), Expect = 1e-033
Identities = 164/194 (84%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | ||||||||||||||||| ||||| ||||| || ||||| ||
Sbjct: 1 ttcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggtcgtatcggaaaa 60
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| | ||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||
Sbjct: 61 caccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctc 120
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||||||||| || |||||||| || ||||| ||||||||||| || ||||||
Sbjct: 121 ttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttactttcacaagctc 180
Query: 242 cgcaacaagttcta 255
|| ||||| |||||
Sbjct: 181 cgtaacaaattcta 194
>gb|AW683275.2|AW683275 NF009H11LF1F1095 Developing leaf Medicago truncatula cDNA clone
NF009H11LF 5', mRNA sequence
Length = 594
Score = 145 bits (73), Expect = 6e-033
Identities = 166/197 (84%)
Strand = Plus / Plus
Query: 59 cgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggc 118
||||||||||||||| | |||||| | || |||||| |||||| ||||| || |||||
Sbjct: 125 cgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacggtcgtatcgga 184
Query: 119 aagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatc 178
||||| | ||||| || |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 185 aagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcaccaccatcgtatc 244
Query: 179 ctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataag 238
|||||||||||||| ||||| || |||||||| |||||||| ||||| ||||| || |||
Sbjct: 245 ctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgctactttcacaag 304
Query: 239 ctccgcaacaagttcta 255
|| || ||||| |||||
Sbjct: 305 cttcgtaacaaattcta 321
>gb|BG452486.1|BG452486 NF089H05LF1F1045 Developing leaf Medicago truncatula cDNA clone
NF089H05LF 5', mRNA sequence
Length = 645
Score = 145 bits (73), Expect = 6e-033
Identities = 168/200 (84%)
Strand = Plus / Minus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 604 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 545
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 544 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 485
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
|| || ||||| ||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 484 catcgcatcctnttcgacaagtaccatccaggttacttcggtaaagttggtatgcgttac 425
Query: 230 ttccataagctccgcaacaa 249
|| || |||||||| |||||
Sbjct: 424 tttcacaagctccgtaacaa 405
>gb|AJ846296.1|AJ846296 AJ846296 MtSCF Medicago truncatula cDNA clone MtCF01A19S6, mRNA
sequence
Length = 622
Score = 145 bits (73), Expect = 6e-033
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 59 cgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggc 118
||||||||||||||| | |||||| | || |||||| |||||| ||||| || |||||
Sbjct: 577 cgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacggtcgtatcgga 518
Query: 119 aagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatc 178
||||| | ||||| || |||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 517 aagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcaccaccatcgtatc 458
Query: 179 ctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataag 238
|||||||||||||| ||||| || |||||||| |||||||| ||||| ||||| || |||
Sbjct: 457 ctcttcgacaagtatcatccaggttacttcggtaaggttggtatgcgctactttcacaag 398
Query: 239 ctccgcaacaagttcta 255
|| || ||||| |||||
Sbjct: 397 cttcgtaacaaattcta 381
>gb|BF638832.1|BF638832 NF060D02PL1F1016 Phosphate starved leaf Medicago truncatula cDNA
clone NF060D02PL 5', mRNA sequence
Length = 534
Score = 141 bits (71), Expect = 9e-032
Identities = 174/207 (84%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgc-ggccacgtgtccgccgggcacgg 108
|||||||| || |||||||||||| | ||||||||| |||||||| ||||| |||||
Sbjct: 28 atgacaacccgattcaagaagaacaggaagaagcgccggccacgtcagtgccggtcacgg 87
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| ||
Sbjct: 88 tcgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatca 147
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| || ||||||||||||||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 148 ccatcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgtta 207
Query: 229 cttccataagctccgcaacaagttcta 255
||| || |||||||| ||||| |||||
Sbjct: 208 ctttcacaagctccgtaacaaattcta 234
>gb|BI263915.1|BI263915 NF107B09PL1F1077 Phosphate starved leaf Medicago truncatula cDNA
clone NF107B09PL 5', mRNA sequence
Length = 574
Score = 141 bits (71), Expect = 9e-032
Identities = 174/207 (84%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccac-gtgtccgccgggcacgg 108
|||||||| || |||||||||||| | ||||||||||||||| || ||||| |||||
Sbjct: 28 atgacaacccgattcaagaagaacaggaagaagcgcggccacngtcagtgccggtcacgg 87
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| ||
Sbjct: 88 tcgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatca 147
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| || ||||||||||||||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 148 ccatcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgtta 207
Query: 229 cttccataagctccgcaacaagttcta 255
||| || |||||||| ||||| |||||
Sbjct: 208 ctttcacaagctccgtaacaaattcta 234
>gb|BF519530.1|BF519530 EST456994 DSIL Medicago truncatula cDNA clone pDSIL-21A9, mRNA
sequence
Length = 429
Score = 139 bits (70), Expect = 4e-031
Identities = 160/190 (84%)
Strand = Plus / Plus
Query: 66 agaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaagcaca 125
|||||||| | ||||||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 1 agaagaacaggaagaagcgcggccacgtcagtgccggtcacggtcgtatcggaaaacacc 60
Query: 126 ggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcg 185
| ||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||||||
Sbjct: 61 gcaagcatcccggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctcttcg 120
Query: 186 acaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctccgca 245
||||||||||||| || |||||||| || ||||| ||||||||||| || |||||||| |
Sbjct: 121 acaagtaccatccaggttacttcggtaaagttggtatgcgttactttcacaagctccgta 180
Query: 246 acaagttcta 255
|||| |||||
Sbjct: 181 acaaattcta 190
>gb|BE325110.2|BE325110 NF114E06ST1F1050 Developing stem Medicago truncatula cDNA clone
NF114E06ST 5', mRNA sequence
Length = 457
Score = 139 bits (70), Expect = 4e-031
Identities = 163/194 (84%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||| | |||||| | || |||||| |||||| ||||| || ||||| |||
Sbjct: 53 ttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacggtcgtatcggaaag 112
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
|| | ||||| || |||||||| ||||||||||| || ||||||||||| |||||||||
Sbjct: 113 catcgcaagcatcccggaggtcgtggtaacgccggaggaatgcaccaccatcgtatcctc 172
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
||||||||||| ||||| || |||||||| |||||||| ||||| ||||| || |||||
Sbjct: 173 ttcgacaagtatcatccaggttacttcggtaaggttggtatgcgctactttcacaagctt 232
Query: 242 cgcaacaagttcta 255
|| ||||| |||||
Sbjct: 233 cgtaacaaattcta 246
>gb|CG967587.1|CG967587 MBEHD29TFB mth2 Medicago truncatula genomic clone 54F10, DNA
sequence
Length = 755
Score = 135 bits (68), Expect = 6e-030
Identities = 167/200 (83%)
Strand = Plus / Minus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || ||||||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 270 atgacaaccagcctcaagaaaaaccggaagaagcgcggccacgtaagcgccggccacggc 211
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | || ||||| ||||| || || |||||||| || ||||||||
Sbjct: 210 cgtatcggaaaacaccgcaaacaccctggaggccgaggaaacgccggaggtatgcaccat 151
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||||||||||||||| || || || ||||||||||| || || |||||||||
Sbjct: 150 caccgcatcctcttcgacaagtatcaccctggttacttcggcaaagtgggtatgcgttac 91
Query: 230 ttccataagctccgcaacaa 249
|| || || |||||||||||
Sbjct: 90 tttcacaaactccgcaacaa 71
>gb|AL375157.1|AL375157 MtBB11G01F1 MtBB Medicago truncatula cDNA clone MtBB11G01 T3, mRNA
sequence
Length = 292
Score = 133 bits (67), Expect = 2e-029
Identities = 173/207 (83%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||| ||||| ||||| |||||
Sbjct: 18 atgacaacccgattcaagaagaacaggaagaagcgcgggcacgtcagtgccggtcacggt 77
Query: 110 cgcatc-ggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||| || || ||| | ||||| || |||||||| ||||||||||| || ||||| ||
Sbjct: 78 cgtatctggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatca 137
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgtta 228
||| || ||||||||||||||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 138 ccatcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgtta 197
Query: 229 cttccataagctccgcaacaagttcta 255
||| || |||||||| ||||| |||||
Sbjct: 198 ctttcacaagctccgtaacaaattcta 224
>gb|BG583240.1|BG583240 EST484990 GVN Medicago truncatula cDNA clone pGVN-72G19 5' end,
mRNA sequence
Length = 722
Score = 133 bits (67), Expect = 2e-029
Identities = 157/187 (83%)
Strand = Plus / Plus
Query: 63 tcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaagc 122
||||||| ||||| ||||||||||||||||| |||||| |||||||| ||||| || |
Sbjct: 13 tcaagaaaaaccggaagaagcgcggccacgtaagcgccggccacggccgtatcggaaaac 72
Query: 123 acaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctct 182
|| | || ||||| ||||| || || |||||||| || |||||||| ||||| |||||||
Sbjct: 73 accgcaaacaccctggaggccgaggaaacgccggaggtatgcaccatcaccgcatcctct 132
Query: 183 tcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctcc 242
|||||||||| || || || ||||||||||| || || ||||||||||| || || ||||
Sbjct: 133 tcgacaagtatcaccctggttacttcggcaaagtgggtatgcgttactttcacaaactcc 192
Query: 243 gcaacaa 249
|||||||
Sbjct: 193 gcaacaa 199
>gb|BQ123811.1|BQ123811 EST609387 GLSD Medicago truncatula cDNA clone pGLSD-33B5, mRNA
sequence
Length = 565
Score = 133 bits (67), Expect = 2e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 77 aagaagcgcggccacgtgtccgccgggcacggccgcatcggcaagcacaggaagcacccg 136
||||||||||||||||| ||||| ||||| || ||||| || ||| | ||||| ||
Sbjct: 8 aagaagcgcggccacgtcagtgccggtcacggtcgtatcggaaaacaccgcaagcatccc 67
Query: 137 ggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgacaagtaccat 196
|||||||| ||||||||||| || ||||| ||||| || |||||||||||||||||||||
Sbjct: 68 ggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctcttcgacaagtaccat 127
Query: 197 ccgggctacttcggcaaggttggcatgcgttacttccataagctccgcaacaagttcta 255
|| || |||||||| || ||||| ||||||||||| || |||||||| ||||| |||||
Sbjct: 128 ccaggttacttcggtaaagttggtatgcgttactttcacaagctccgtaacaaattcta 186
>gb|BQ149755.1|BQ149755 NF108E03FL1F1022 Developing flower Medicago truncatula cDNA clone
NF108E03FL 5', mRNA sequence
Length = 250
Score = 127 bits (64), Expect = 1e-027
Identities = 174/208 (83%), Gaps = 2/208 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccac-gtgtccgccgggcacgg 108
|||||||| || |||||||||||| | ||||||||||||||| || ||||| |||||
Sbjct: 31 atgacaacccgattcaagaagaacaggaagaagcgcggccacngtcagtgccggtcacgg 90
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| ||
Sbjct: 91 tcgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatca 150
Query: 169 ccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatg-cgtt 227
||| || ||||||||||||||||||||||| || |||||||| || ||||| ||| ||||
Sbjct: 151 ccatcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgccgtt 210
Query: 228 acttccataagctccgcaacaagttcta 255
|||| || |||||||| ||||| |||||
Sbjct: 211 actttcacaagctccgtaacaaattcta 238
>gb|BM779620.1|BM779620 EST590196 KV2 Medicago truncatula cDNA clone pKV2-52H7, mRNA
sequence
Length = 504
Score = 125 bits (63), Expect = 5e-027
Identities = 135/159 (84%)
Strand = Plus / Minus
Query: 97 cgccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccgg 156
|||||| ||||| || ||||| ||||| | ||||| || |||||||| |||||||||||
Sbjct: 498 cgccggtcacggtcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccgg 439
Query: 157 tggcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggt 216
|| ||||||||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 438 aggaatgcaccaccatcgtatcctcttcgacaagtatcatccaggttacttcggtaaggt 379
Query: 217 tggcatgcgttacttccataagctccgcaacaagttcta 255
||| ||||| ||||| || ||||| || ||||| |||||
Sbjct: 378 tggtatgcgctactttcacaagcttcgtaacaaattcta 340
>gb|BI311270.1|BI311270 EST5313020 GESD Medicago truncatula cDNA clone pGESD10K20 5' end,
mRNA sequence
Length = 525
Score = 123 bits (62), Expect = 2e-026
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 98 gccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggt 157
||||| ||||| || ||||| || ||| | ||||| || |||||||| |||||||||||
Sbjct: 13 gccggtcacggtcgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccgga 72
Query: 158 ggcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggtt 217
|| ||||| ||||| || ||||||||||||||||||||||| || |||||||| || |||
Sbjct: 73 ggtatgcatcaccatcgcatcctcttcgacaagtaccatccaggttacttcggtaaagtt 132
Query: 218 ggcatgcgttacttccataagctccgcaacaagttcta 255
|| ||||||||||| || |||||||| ||||| |||||
Sbjct: 133 ggtatgcgttactttcacaagctccgtaacaaattcta 170
>gb|AW683559.2|AW683559 NF015H05LF1F1047 Developing leaf Medicago truncatula cDNA clone
NF015H05LF 5', mRNA sequence
Length = 368
Score = 119 bits (60), Expect = 3e-025
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 128 aagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgac 187
||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 108 aagcatcccggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctcttcgac 167
Query: 188 aagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctccgcaac 247
||||||||||| || |||||||| || ||||| ||||||||||| || |||||||| |||
Sbjct: 168 aagtaccatccaggttacttcggtaaagttggtatgcgttactttcacaagctccgtaac 227
Query: 248 aagttcta 255
|| |||||
Sbjct: 228 aaattcta 235
>gb|BI271455.1|BI271455 NF023A02FL1F1008 Developing flower Medicago truncatula cDNA clone
NF023A02FL 5', mRNA sequence
Length = 353
Score = 119 bits (60), Expect = 3e-025
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 128 aagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgac 187
||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 129 aagcatcccggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctcttcgac 188
Query: 188 aagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctccgcaac 247
||||||||||| || |||||||| || ||||| ||||||||||| || |||||||| |||
Sbjct: 189 aagtaccatccaggttacttcggtaaagttggtatgcgttactttcacaagctccgtaac 248
Query: 248 aagttcta 255
|| |||||
Sbjct: 249 aaattcta 256
>gb|BQ122566.1|BQ122566 EST608142 GLSD Medicago truncatula cDNA clone pGLSD-29I6, mRNA
sequence
Length = 442
Score = 119 bits (60), Expect = 3e-025
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 128 aagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgac 187
||||| || |||||||| ||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 101 aagcatcccggaggtcgtggtaacgccggaggtatgcatcaccatcgcatcctcttcgac 160
Query: 188 aagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctccgcaac 247
||||||||||| || |||||||| || ||||| ||||||||||| || |||||||| |||
Sbjct: 161 aagtaccatccaggttacttcggtaaagttggtatgcgttactttcacaagctccgtaac 220
Query: 248 aagttcta 255
|| |||||
Sbjct: 221 aaattcta 228
Score = 56.0 bits (28), Expect = 4e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgt 93
|||||||| || |||||||||||| | |||||||||||||||||
Sbjct: 20 atgacaacccgattcaagaagaacaggaagaagcgcggccacgt 63
>gb|AJ846636.1|AJ846636 AJ846636 MtSN0 Medicago truncatula cDNA clone MtN002L14S6, mRNA
sequence
Length = 206
Score = 105 bits (53), Expect = 5e-021
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 154 atgacaacccgattcaagaagaacaggaagaagcgcggccacgtcagtgccggtcacggt 95
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 94 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 35
Query: 170 caccgtatcctcttcgacaagtacc 194
|| || |||||||||||||||||||
Sbjct: 34 catcgcatcctcttcgacaagtacc 10
>gb|AL373269.1|AL373269 MtBA56G10F1 MtBA Medicago truncatula cDNA clone MtBA56G10 T3, mRNA
sequence
Length = 175
Score = 91.7 bits (46), Expect = 7e-017
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||| || |||||||||||| | | |||||||||||| | ||||| |||||
Sbjct: 18 atgacaacccgattcaagaagaacaggattaagcgcggccactttagtgccggtcacggt 77
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|| ||||| || ||| | ||||| || |||||||| ||||||||||| || ||||| |||
Sbjct: 78 cgtatcggaaaacaccgcaagcatcccggaggtcgtggtaacgccggaggtatgcatcac 137
Query: 170 caccgtatcctcttcgacaagtaccatccgggctactt 207
|| || ||||||||||||||||||||||| || |||||
Sbjct: 138 catcgcatcctcttcgacaagtaccatccaggttactt 175
>gb|CX530751.1|CX530751 s13dNF27E04MJ024_247517 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 647
Score = 89.7 bits (45), Expect = 3e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 149 aacgccggtggcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttc 208
|||||||| || |||||||| ||||| ||||||||||||||||| || || || ||||||
Sbjct: 14 aacgccggaggtatgcaccatcaccgcatcctcttcgacaagtatcaccctggttacttc 73
Query: 209 ggcaaggttggcatgcgttacttccataagctccgcaacaa 249
||||| || || ||||||||||| || || |||||||||||
Sbjct: 74 ggcaaagtgggtatgcgttactttcacaaactccgcaacaa 114
>gb|CG943721.1|CG943721 MBEBF59TF mth2 Medicago truncatula genomic clone 18I22, DNA
sequence
Length = 799
Score = 81.8 bits (41), Expect = 7e-014
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 49 gatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacgg 108
|||||| || ||||||||||||||| | |||||| | || |||||| |||||| |||||
Sbjct: 143 gatgacgacccgcttcaagaagaacaggaagaagagaggtcacgtgagcgccggtcacgg 84
Query: 109 ccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcacca 168
|| ||||| ||||| | ||||| || |||||||| ||||||||||| || |||||||
Sbjct: 83 tcgtatcggaaagcatcgcaagcatcccggaggtcgtggtaacgccggaggaatgcaccc 24
Query: 169 ccaccgtatcctcttcg 185
|| |||||||||||||
Sbjct: 23 ccctcgtatcctcttcg 7
>gb|AL378240.1|AL378240 MtBB36H09R1 MtBB Medicago truncatula cDNA clone MtBB36H09 T7, mRNA
sequence
Length = 479
Score = 81.8 bits (41), Expect = 7e-014
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 167 caccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgt 226
||||| || ||||||||||||||||||||||| || |||||||| || ||||| ||||||
Sbjct: 5 caccatcgcatcctcttcgacaagtaccatccaggttacttcggtaaagttggtatgcgt 64
Query: 227 tacttccataagctccgcaacaagttcta 255
||||| | |||||||| ||||| |||||
Sbjct: 65 tactttcccaagctccgtaacaaattcta 93
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 132,264
Number of Sequences: 392609
Number of extensions: 132264
Number of successful extensions: 10596
Number of sequences better than 0.5: 55
Number of HSP's better than 0.5 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10485
Number of HSP's gapped (non-prelim): 83
length of query: 699
length of database: 441,732,993
effective HSP length: 19
effective length of query: 680
effective length of database: 434,273,422
effective search space: 295305926960
effective search space used: 295305926960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)