BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2441599.2.1
         (755 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CR352109.1|  mte1-9H22RM1 BAC end, cultivar Jemalong A17...    40   0.26 
gb|AW686776.1|AW686776  NF042G06NR1F1000 Nodulated root Medi...    40   0.26 
gb|AW774750.1|AW774750  EST333901 KV3 Medicago truncatula cD...    40   0.26 
gb|BI264110.1|BI264110  NF093F01PL1F1014 Phosphate starved l...    40   0.26 
gb|CB893324.1|CB893324  EST646116 HOGA Medicago truncatula c...    40   0.26 
gb|CB893330.1|CB893330  EST646122 HOGA Medicago truncatula c...    40   0.26 
gb|CB893335.1|CB893335  EST646127 HOGA Medicago truncatula c...    40   0.26 
gb|CB893728.1|CB893728  EST646520 HOGA Medicago truncatula c...    40   0.26 
gb|AJ846992.1|AJ846992  AJ846992 MtSTW Medicago truncatula c...    40   0.26 

>emb|CR352109.1| mte1-9H22RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
           genomic survey sequence
          Length = 520

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 22  gcagccaacaaagaagatagaaaa 45



>gb|AW686776.1|AW686776 NF042G06NR1F1000 Nodulated root Medicago truncatula cDNA clone
           NF042G06NR 5', mRNA sequence
          Length = 649

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 307 gcagccaacaaagaagatagaaaa 330



>gb|AW774750.1|AW774750 EST333901 KV3 Medicago truncatula cDNA clone pKV3-23F18, mRNA
           sequence
          Length = 724

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 582 gcagccaacaaagaagatagaaaa 605



>gb|BI264110.1|BI264110 NF093F01PL1F1014 Phosphate starved leaf Medicago truncatula cDNA
           clone NF093F01PL 5', mRNA sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 221 gcagccaacaaagaagatagaaaa 244



>gb|CB893324.1|CB893324 EST646116 HOGA Medicago truncatula cDNA clone HOGA-27B23, mRNA
           sequence
          Length = 791

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 536 gcagccaacaaagaagatagaaaa 559



>gb|CB893330.1|CB893330 EST646122 HOGA Medicago truncatula cDNA clone HOGA-27D13, mRNA
           sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 538 gcagccaacaaagaagatagaaaa 561



>gb|CB893335.1|CB893335 EST646127 HOGA Medicago truncatula cDNA clone HOGA-27D23, mRNA
           sequence
          Length = 788

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 536 gcagccaacaaagaagatagaaaa 559



>gb|CB893728.1|CB893728 EST646520 HOGA Medicago truncatula cDNA clone HOGA-28H4, mRNA
           sequence
          Length = 786

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gcagccaacaaagaagatacaaaa 165
           ||||||||||||||||||| ||||
Sbjct: 96  gcagccaacaaagaagatagaaaa 119



>gb|AJ846992.1|AJ846992 AJ846992 MtSTW Medicago truncatula cDNA clone MtTW03A20N1, mRNA
           sequence
          Length = 439

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 558 cggttggtgtcgaacgttcggtagtaatgctccacgaaggcctt 601
           |||||||||||||| ||   |||||| ||||||||||| |||||
Sbjct: 333 cggttggtgtcgaaggtggtgtagtagtgctccacgaatgcctt 376



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 142,910
Number of Sequences: 392609
Number of extensions: 142910
Number of successful extensions: 11837
Number of sequences better than  0.5: 9
Number of HSP's better than  0.5 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11825
Number of HSP's gapped (non-prelim): 12
length of query: 755
length of database: 441,732,993
effective HSP length: 20
effective length of query: 735
effective length of database: 433,880,813
effective search space: 318902397555
effective search space used: 318902397555
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)