BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440773.2.1
(1437 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW980379.1|AW980379 EST391532 GVN Medicago truncatula cD... 70 6e-010
gb|AL379975.1|AL379975 MtBB48E09F1 MtBB Medicago truncatula... 70 6e-010
gb|BF644856.1|BF644856 NF023B01EC1F1011 Elicited cell cultu... 70 6e-010
gb|BF648759.1|BF648759 NF051A12EC1F1087 Elicited cell cultu... 70 6e-010
gb|BG648753.1|BG648753 EST510372 HOGA Medicago truncatula c... 70 6e-010
gb|BQ154515.1|BQ154515 NF071F06IR1F1059 Irradiated Medicago... 70 6e-010
gb|BQ157180.1|BQ157180 NF102A04IR1F1033 Irradiated Medicago... 70 6e-010
gb|BQ157463.1|BQ157463 NF105B07IR1F1061 Irradiated Medicago... 70 6e-010
gb|CA990854.1|CA990854 EST644362 GESD Medicago truncatula c... 70 6e-010
gb|CA990864.1|CA990864 EST644372 GESD Medicago truncatula c... 70 6e-010
gb|CA991198.1|CA991198 EST644706 GESD Medicago truncatula c... 70 6e-010
gb|CX519826.1|CX519826 s13dNF53C03VI018_443704 Virus-Infect... 70 6e-010
gb|CX530345.1|CX530345 s13dNF59F03MJ028_246723 Methyl Jasmo... 70 6e-010
gb|DW016961.1|DW016961 EST1225922 MTY Medicago truncatula c... 70 6e-010
gb|DW019196.1|DW019196 EST1228157 MTY Medicago truncatula c... 70 6e-010
gb|CA989726.1|CA989726 EST643234 GLSD Medicago truncatula c... 66 9e-009
gb|BF636462.1|BF636462 NF091D09DT1F1077 Drought Medicago tr... 64 4e-008
gb|BG457009.1|BG457009 NF099D12PL1F1096 Phosphate starved l... 58 2e-006
gb|BF634060.1|BF634060 NF085C11DT1F1085 Drought Medicago tr... 50 5e-004
gb|AC126007.16| Medicago truncatula clone mth2-11o4, comple... 48 0.002
gb|BE249366.2|BE249366 NF014G06LF1F1051 Developing leaf Med... 46 0.008
gb|BG454647.1|BG454647 NF101H01LF1F1012 Developing leaf Med... 44 0.033
gb|AC175685.1| Medicago truncatula chromosome 2 clone mte1-... 42 0.13
>gb|AW980379.1|AW980379 EST391532 GVN Medicago truncatula cDNA clone pGVN-30K24, mRNA
sequence
Length = 631
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 459 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 518
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 519 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 578
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 579 tgttatgaaatgtggccacacaatgca 605
>gb|AL379975.1|AL379975 MtBB48E09F1 MtBB Medicago truncatula cDNA clone MtBB48E09 T3, mRNA
sequence
Length = 485
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 73 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 132
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 133 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 192
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 193 tgttatgaaatgtggccacacaatgca 219
>gb|BF644856.1|BF644856 NF023B01EC1F1011 Elicited cell culture Medicago truncatula cDNA
clone NF023B01EC 5', mRNA sequence
Length = 659
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 452 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 511
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 512 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 571
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 572 tgttatgaaatgtggccacacaatgca 598
>gb|BF648759.1|BF648759 NF051A12EC1F1087 Elicited cell culture Medicago truncatula cDNA
clone NF051A12EC 5', mRNA sequence
Length = 655
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 453 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 512
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 513 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 572
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 573 tgttatgaaatgtggccacacaatgca 599
>gb|BG648753.1|BG648753 EST510372 HOGA Medicago truncatula cDNA clone pHOGA-23B6 5' end,
mRNA sequence
Length = 797
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 416 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 475
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 476 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 535
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 536 tgttatgaaatgtggccacacaatgca 562
>gb|BQ154515.1|BQ154515 NF071F06IR1F1059 Irradiated Medicago truncatula cDNA clone
NF071F06IR 5', mRNA sequence
Length = 615
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 263 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 322
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 323 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 382
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 383 tgttatgaaatgtggccacacaatgca 409
>gb|BQ157180.1|BQ157180 NF102A04IR1F1033 Irradiated Medicago truncatula cDNA clone
NF102A04IR 5', mRNA sequence
Length = 678
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 230 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 289
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 290 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 349
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 350 tgttatgaaatgtggccacacaatgca 376
>gb|BQ157463.1|BQ157463 NF105B07IR1F1061 Irradiated Medicago truncatula cDNA clone
NF105B07IR 5', mRNA sequence
Length = 674
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 91 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 150
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 151 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 210
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 211 tgttatgaaatgtggccacacaatgca 237
>gb|CA990854.1|CA990854 EST644362 GESD Medicago truncatula cDNA clone GESD-31G21, mRNA
sequence
Length = 707
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 382 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 441
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 442 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 501
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 502 tgttatgaaatgtggccacacaatgca 528
>gb|CA990864.1|CA990864 EST644372 GESD Medicago truncatula cDNA clone GESD-31I21, mRNA
sequence
Length = 455
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 171 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 230
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 231 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 290
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 291 tgttatgaaatgtggccacacaatgca 317
>gb|CA991198.1|CA991198 EST644706 GESD Medicago truncatula cDNA clone GESD-32O23, mRNA
sequence
Length = 839
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 383 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 442
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 443 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 502
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 503 tgttatgaaatgtggccacacaatgca 529
>gb|CX519826.1|CX519826 s13dNF53C03VI018_443704 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 554
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 272 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 331
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 332 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 391
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 392 tgttatgaaatgtggccacacaatgca 418
>gb|CX530345.1|CX530345 s13dNF59F03MJ028_246723 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 655
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 420 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 479
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 480 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 539
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 540 tgttatgaaatgtggccacacaatgca 566
>gb|DW016961.1|DW016961 EST1225922 MTY Medicago truncatula cDNA clone MTYAN76, mRNA
sequence
Length = 845
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 482 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 541
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 542 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 601
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 602 tgttatgaaatgtggccacacaatgca 628
>gb|DW019196.1|DW019196 EST1228157 MTY Medicago truncatula cDNA clone MTYBG09, mRNA
sequence
Length = 832
Score = 69.9 bits (35), Expect = 6e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 482 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 541
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 542 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 601
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 602 tgttatgaaatgtggccacacaatgca 628
>gb|CA989726.1|CA989726 EST643234 GLSD Medicago truncatula cDNA clone pGLSD-42H1, mRNA
sequence
Length = 583
Score = 65.9 bits (33), Expect = 9e-009
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 542 tgtgtggagaactcaatgaggcagaattgcccaatctgttatgagtatctatttgactca 601
|||||||||||||| |||||||| |||| ||||| ||||| ||||| || |||||||||
Sbjct: 42 tgtgtggagaactccatgaggcatcattgtccaatttgttacgagtacctgtttgactca 101
Query: 602 ttacaaggaacaagagttctgaactgtggacacacaatgca 642
|| ||| |||| ||| |||| ||||| |||||||||||
Sbjct: 102 ttgaaagatacaactgttatgaaatgtggccacacaatgca 142
>gb|BF636462.1|BF636462 NF091D09DT1F1077 Drought Medicago truncatula cDNA clone NF091D09DT
5', mRNA sequence
Length = 666
Score = 63.9 bits (32), Expect = 4e-008
Identities = 118/147 (80%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| || |||||||||||
Sbjct: 452 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgngtggagaactc 511
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| ||||| ||||| || ||||||||||| ||| ||||
Sbjct: 512 catgaggcatcattgtccaatttgttacgagtacctgtttgactcattgaaagatacaac 571
Query: 616 agttctgaactgtggacacacaatgca 642
||| |||| ||||| |||||||||||
Sbjct: 572 tgttatgaaatgtggccacacaatgca 598
>gb|BG457009.1|BG457009 NF099D12PL1F1096 Phosphate starved leaf Medicago truncatula cDNA
clone NF099D12PL 5', mRNA sequence
Length = 678
Score = 58.0 bits (29), Expect = 2e-006
Identities = 117/147 (79%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 457 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 516
Query: 556 aatgaggcagaattgcccaatctgttatgagtatctatttgactcattacaaggaacaag 615
|||||||| |||| ||||| || || ||||| || ||||||||||| ||| ||||
Sbjct: 517 catgaggcatcattgtccaatttgntacgagtacctgtttgactcattgaaagatacaac 576
Query: 616 agttctgaactgtggacacacaatgca 642
| | |||| ||||| |||||||||||
Sbjct: 577 tggtatgaaatgtggncacacaatgca 603
>gb|BF634060.1|BF634060 NF085C11DT1F1085 Drought Medicago truncatula cDNA clone NF085C11DT
5', mRNA sequence
Length = 550
Score = 50.1 bits (25), Expect = 5e-004
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 453 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 512
Query: 556 aatgaggcagaattgcccaatctgttatgagta 588
|||||||| |||| ||||| ||||| |||||
Sbjct: 513 catgaggcatcattgtccaatttgttacgagta 545
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence
Length = 106747
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 375 tgggagagtacttttgtgatatatgcaaattttatgatgatgat 418
||||| |||||||||||| || ||||||||| | ||||||||||
Sbjct: 89168 tgggaaagtacttttgtggtacatgcaaattctttgatgatgat 89211
>gb|BE249366.2|BE249366 NF014G06LF1F1051 Developing leaf Medicago truncatula cDNA clone
NF014G06LF 5', mRNA sequence
Length = 565
Score = 46.1 bits (23), Expect = 0.008
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 496 gaagtgtgggtcctgctattctgttatactccgtgataaccatcagtgtgtggagaactc 555
|||||||||||| ||||| || ||| || |||||||| ||| ||||||||||||||
Sbjct: 418 gaagtgtgggtcttgctactcagttgctctgcgtgataatcatttatgtgtggagaactc 477
Query: 556 aatgaggcagaattgcccaatctgtta 582
|||||||| |||| ||||| |||||
Sbjct: 478 catgaggcatcattgtccaatttgtta 504
>gb|BG454647.1|BG454647 NF101H01LF1F1012 Developing leaf Medicago truncatula cDNA clone
NF101H01LF 5', mRNA sequence
Length = 580
Score = 44.1 bits (22), Expect = 0.033
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 547 ggagaactcaatgaggcagaattgcccaatctgttatgagtatctatttgactcatt 603
||||||||| |||||||| |||| ||||| ||||| |||| || |||||||||||
Sbjct: 514 ggagaactccatgaggcatcattgtccaatttgttacnagtacctgtttgactcatt 570
>gb|AC175685.1| Medicago truncatula chromosome 2 clone mte1-55k6, *** SEQUENCING IN
PROGRESS ***, 8 ordered pieces
Length = 120404
Score = 42.1 bits (21), Expect = 0.13
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 542 tgtgtggagaactcaatgaggcagaattgcccaatctgtta 582
|||||||||||||| |||||||| |||| ||||| |||||
Sbjct: 25595 tgtgtggagaactccatgaggcatcattgtccaatttgtta 25635
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 364,627
Number of Sequences: 392609
Number of extensions: 364627
Number of successful extensions: 26817
Number of sequences better than 0.5: 23
Number of HSP's better than 0.5 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26731
Number of HSP's gapped (non-prelim): 67
length of query: 1437
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1417
effective length of database: 433,880,813
effective search space: 614809112021
effective search space used: 614809112021
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)