BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440568.2.1
(1135 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA919239.1|CA919239 EST636957 MTUS Medicago truncatula c... 143 4e-032
gb|CX522180.1|CX522180 s13dNF79B12VI101_470164 Virus-Infect... 143 4e-032
gb|AW560612.1|AW560612 EST315660 DSIR Medicago truncatula c... 137 2e-030
gb|AL384220.1|AL384220 MtBC20F11F1 MtBC Medicago truncatula... 137 2e-030
gb|BQ165442.1|BQ165442 EST611311 KVKC Medicago truncatula c... 137 2e-030
gb|AL384221.1|AL384221 MtBC20F11R1 MtBC Medicago truncatula... 135 9e-030
gb|CX534205.1|CX534205 s13dNF0TF09MJ075_322169 Methyl Jasmo... 98 2e-018
gb|AW125976.2|AW125976 N100171e rootphos(-) Medicago trunca... 82 1e-013
gb|AL384150.1|AL384150 MtBC20B09F1 MtBC Medicago truncatula... 82 1e-013
gb|BF638165.1|BF638165 NF043A04PL1F1023 Phosphate starved l... 82 1e-013
gb|CA919918.1|CA919918 EST637636 MTUS Medicago truncatula c... 82 1e-013
gb|CA920914.1|CA920914 EST638632 MTUS Medicago truncatula c... 82 1e-013
gb|AC144728.11| Medicago truncatula clone mth2-6g7, complet... 74 3e-011
gb|AC136840.24| Medicago truncatula clone mth2-33n3, comple... 74 3e-011
gb|AL373043.1|AL373043 MtBA55C10R1 MtBA Medicago truncatula... 66 7e-009
gb|AC152752.18| Medicago truncatula clone mth2-89c9, comple... 62 1e-007
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 62 1e-007
gb|AC153124.12| Medicago truncatula clone mth2-21e10, WORKI... 62 1e-007
gb|BG645026.1|BG645026 EST506645 KV3 Medicago truncatula cD... 54 3e-005
gb|AC140550.31| Medicago truncatula clone mth2-54a24, compl... 54 3e-005
gb|AW560890.1|AW560890 EST315938 DSIR Medicago truncatula c... 52 1e-004
gb|AW574209.1|AW574209 EST316800 GVN Medicago truncatula cD... 52 1e-004
gb|BE321431.1|BE321431 NF025B12IN1F1093 Insect herbivory Me... 52 1e-004
gb|BE997907.1|BE997907 EST429630 GVSN Medicago truncatula c... 52 1e-004
gb|BE999504.1|BE999504 EST431227 GVSN Medicago truncatula c... 52 1e-004
gb|BF521245.1|BF521245 EST458656 DSIL Medicago truncatula c... 52 1e-004
gb|BF647943.1|BF647943 NF013F07EC1F1061 Elicited cell cultu... 52 1e-004
gb|AW684813.2|AW684813 NF021D05NR1F1000 Nodulated root Medi... 52 1e-004
gb|BE326096.2|BE326096 NF086E12ST1F1088 Developing stem Med... 52 1e-004
gb|BE248184.2|BE248184 NF002E08DT1F1055 Drought Medicago tr... 52 1e-004
gb|BG447963.1|BG447963 NF104D07EC1F1060 Elicited cell cultu... 52 1e-004
gb|BG453804.1|BG453804 NF094E02LF1F1008 Developing leaf Med... 52 1e-004
gb|BG645889.1|BG645889 EST507508 KV3 Medicago truncatula cD... 52 1e-004
gb|BG648020.1|BG648020 EST509639 HOGA Medicago truncatula c... 52 1e-004
gb|BG648098.1|BG648098 EST509717 HOGA Medicago truncatula c... 52 1e-004
gb|BI265071.1|BI265071 NF078E03IN1F1023 Insect herbivory Me... 52 1e-004
gb|BI272492.1|BI272492 NF026H02FL1F1027 Developing flower M... 52 1e-004
gb|BM780119.1|BM780119 EST590695 KV2 Medicago truncatula cD... 52 1e-004
gb|BQ149074.1|BQ149074 NF087E07FL1F1054 Developing flower M... 52 1e-004
gb|BQ149448.1|BQ149448 NF090F08FL1F1075 Developing flower M... 52 1e-004
gb|BQ165441.1|BQ165441 EST611310 KVKC Medicago truncatula c... 52 1e-004
gb|AJ503352.1|AJ503352 AJ503352 MTAMP Medicago truncatula c... 52 1e-004
gb|AJ504274.1|AJ504274 AJ504274 MTAMP Medicago truncatula c... 52 1e-004
gb|CB891167.1|CB891167 EST648136 KV3 Medicago truncatula cD... 52 1e-004
gb|CF068540.1|CF068540 EST669261 MTUS Medicago truncatula c... 52 1e-004
gb|CF068656.1|CF068656 EST669377 MTUS Medicago truncatula c... 52 1e-004
gb|AJ845814.1|AJ845814 AJ845814 MtSNF Medicago truncatula c... 52 1e-004
gb|DW015654.1|DW015654 EST1224615 MTY Medicago truncatula c... 52 1e-004
gb|DW015937.1|DW015937 EST1224898 MTY Medicago truncatula c... 52 1e-004
gb|DW018674.1|DW018674 EST1227635 MTY Medicago truncatula c... 52 1e-004
gb|AC146793.7| Medicago truncatula clone mth2-10p9, complet... 52 1e-004
gb|DW017737.1|DW017737 EST1226698 MTY Medicago truncatula c... 50 4e-004
gb|CG958974.1|CG958974 MBELX21TR mth2 Medicago truncatula g... 48 0.002
gb|CG961522.1|CG961522 MBEMT01TF mth2 Medicago truncatula g... 48 0.002
emb|CR328529.1| mte1-57H5RM1 BAC end, cultivar Jemalong A17... 48 0.002
emb|CR481701.1| mth2-145A6FM1 BAC end, cultivar Jemalong A1... 48 0.002
emb|CR508074.1| mth4-6C18RM1 BAC end, cultivar Jemalong A17... 48 0.002
gb|BI271412.1|BI271412 NF050H09FL1F1080 Developing flower M... 48 0.002
gb|CA857877.1|CA857877 EST635132 GLSD Medicago truncatula c... 48 0.002
gb|CA858080.1|CA858080 EST635335 GLSD Medicago truncatula c... 48 0.002
gb|AC123572.15| Medicago truncatula clone mth2-2b2, complet... 48 0.002
emb|CR337941.1| mte1-7A21RM1 BAC end, cultivar Jemalong A17... 46 0.006
gb|AW689792.1|AW689792 NF024E01ST1F1000 Developing stem Med... 46 0.006
gb|AL366370.1|AL366370 MtBA07C04F1 MtBA Medicago truncatula... 46 0.006
gb|BF632829.1|BF632829 NF045A12DT1F1097 Drought Medicago tr... 46 0.006
gb|BF636279.1|BF636279 NF106F01DT1F1013 Drought Medicago tr... 46 0.006
gb|BF641894.1|BF641894 NF050H01IN1F1014 Insect herbivory Me... 46 0.006
gb|BF650460.1|BF650460 NF097A09EC1F1067 Elicited cell cultu... 46 0.006
gb|BG453610.1|BG453610 NF098H06LF1F1057 Developing leaf Med... 46 0.006
gb|BG454296.1|BG454296 NF110A10LF1F1070 Developing leaf Med... 46 0.006
gb|BG588605.1|BG588605 EST490414 MHRP- Medicago truncatula ... 46 0.006
gb|BI272961.1|BI272961 NF099H05FL1F1047 Developing flower M... 46 0.006
gb|CA921635.1|CA921635 EST639353 MTUS Medicago truncatula c... 46 0.006
gb|CX517030.1|CX517030 s13dNF11F10VI091_398531 Virus-Infect... 46 0.006
gb|CX517179.1|CX517179 s13dNF14F06VI059_398829 Virus-Infect... 46 0.006
gb|CX533578.1|CX533578 s13dNF0HB06MJ045_320309 Methyl Jasmo... 46 0.006
gb|AC160012.1| Medicago truncatula chromosome 2 BAC clone m... 46 0.006
gb|AC151674.9| Medicago truncatula clone mth2-28i16, WORKIN... 46 0.006
gb|AC124215.20| Medicago truncatula clone mth2-32m6, WORKIN... 46 0.006
gb|CG935618.1|CG935618 MBEJL43TR mth2 Medicago truncatula g... 44 0.026
emb|CR500785.1| mth2-178C2FM1 BAC end, cultivar Jemalong A1... 44 0.026
gb|AW981479.1|AW981479 EST392632 DSIL Medicago truncatula c... 44 0.026
gb|AL386017.1|AL386017 MtBC32B01F1 MtBC Medicago truncatula... 44 0.026
gb|BF633605.1|BF633605 NF058A04DT1F1033 Drought Medicago tr... 44 0.026
gb|BE320108.2|BE320108 NF025C02RT1F1006 Developing root Med... 44 0.026
gb|BG448533.1|BG448533 NF037A01RT1F1001 Developing root Med... 44 0.026
gb|CA919580.1|CA919580 EST637298 MTUS Medicago truncatula c... 44 0.026
gb|AJ499547.1|AJ499547 AJ499547 MTGIM Medicago truncatula c... 44 0.026
gb|CX526421.1|CX526421 s13dNF35F08AT075_510586 Aphid-Infect... 44 0.026
gb|AC148994.3| Medicago truncatula chromosome 7 BAC clone m... 44 0.026
gb|AC150245.6| Medicago truncatula chromosome 7 clone mth2-... 44 0.026
emb|CR969028.1| mth4-25J4RM1 BAC end, cultivar Jemalong A17... 42 0.10
gb|AW560804.1|AW560804 EST315852 DSIR Medicago truncatula c... 42 0.10
gb|AW329190.2|AW329190 N200402e rootphos(-) Medicago trunca... 42 0.10
gb|BE320701.2|BE320701 NF035H04RT1F1032 Developing root Med... 42 0.10
gb|BG647749.1|BG647749 EST509368 HOGA Medicago truncatula c... 42 0.10
gb|AJ548059.1|AJ548059 AJ548059 MTAPHEU Medicago truncatula... 42 0.10
gb|AC136506.10| Medicago truncatula clone mth2-33c8, comple... 42 0.10
gb|AC149600.1| Medicago truncatula chromosome 2 clone mte1-... 42 0.10
gb|CG937224.1|CG937224 MBEGJ92TF mth2 Medicago truncatula g... 40 0.40
gb|CG940691.1|CG940691 MBEHJ46TR mth2 Medicago truncatula g... 40 0.40
gb|AW776098.1|AW776098 EST335163 DSIL Medicago truncatula c... 40 0.40
gb|BE998533.1|BE998533 EST430256 GVSN Medicago truncatula c... 40 0.40
gb|BF634699.1|BF634699 NF064D01DT1F1012 Drought Medicago tr... 40 0.40
gb|BQ156367.1|BQ156367 NF092A10IR1F1081 Irradiated Medicago... 40 0.40
gb|CA991370.1|CA991370 EST644878 GESD Medicago truncatula c... 40 0.40
gb|CX522814.1|CX522814 s13dNF85D08VI074_471432 Virus-Infect... 40 0.40
gb|CX522873.1|CX522873 s13dNF91B01VI013_471550 Virus-Infect... 40 0.40
gb|DW016873.1|DW016873 EST1225834 MTY Medicago truncatula c... 40 0.40
gb|DW018593.1|DW018593 EST1227554 MTY Medicago truncatula c... 40 0.40
gb|AC144431.11| Medicago truncatula clone mth2-21i14, compl... 40 0.40
gb|AC146587.20| Medicago truncatula clone mth2-144j8, compl... 40 0.40
emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-1... 40 0.40
>gb|CA919239.1|CA919239 EST636957 MTUS Medicago truncatula cDNA clone MTUS-10G7, mRNA
sequence
Length = 787
Score = 143 bits (72), Expect = 4e-032
Identities = 357/452 (78%)
Strand = Plus / Plus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 224 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 283
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 284 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 343
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 344 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 403
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| | |||||| || |||||||| || |||||||| || || ||||| |||||
Sbjct: 404 cctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttccagaaggacaaca 463
Query: 525 ccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggcgca 584
|||||||| ||||||||||| |||| | | || || ||||| ||||| ||||| |||
Sbjct: 464 ccaaaactgtatacatcacttttagcattcaactgtccggtcattgcatattcaggtgca 523
Query: 585 tggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtcaggagct 644
||||| || || ||||| || || | || || ||||| ||||| |||||||| |||||
Sbjct: 524 tggtaaccaaaggttccaaggacacgggtggaatgaagacgagcagccatgtctggagcc 583
Query: 645 tggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaaggacgttg 704
|| || |||| |||||| || || || || || ||||| || || || | || || |||
Sbjct: 584 tgatttgacaaatcaaaatctgcaatttttgcaacatcatcgtcaaagattagcacattg 643
Query: 705 ctagacttgatgtctcggtgtatgatatgggg 736
|| ||||||||||| ||||| || ||||||||
Sbjct: 644 cttgacttgatgtcccggtggataatatgggg 675
>gb|CX522180.1|CX522180 s13dNF79B12VI101_470164 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 581
Score = 143 bits (72), Expect = 4e-032
Identities = 357/452 (78%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 464 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 405
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 404 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 345
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 344 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 285
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| | |||||| || |||||||| || |||||||| || || ||||| |||||
Sbjct: 284 cctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttccagaaggacaaca 225
Query: 525 ccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggcgca 584
|||||||| ||||||||||| |||| | | || || ||||| ||||| ||||| |||
Sbjct: 224 ccaaaactgtatacatcacttttagcattcaactgtccggtcattgcatattcaggtgca 165
Query: 585 tggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtcaggagct 644
||||| || || ||||| || || | || || ||||| ||||| |||||||| |||||
Sbjct: 164 tggtaaccaaaggttccaaggacacgggtggaatgaagacgagcagccatgtctggagcc 105
Query: 645 tggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaaggacgttg 704
|| || |||| |||||| || || || || || ||||| || || || | || || |||
Sbjct: 104 tgatttgacaaatcaaaatctgcaatttttgcaacatcatcgtcaaagattagcacattg 45
Query: 705 ctagacttgatgtctcggtgtatgatatgggg 736
|| ||||||||||| ||||| || ||||||||
Sbjct: 44 cttgacttgatgtcccggtggataatatgggg 13
>gb|AW560612.1|AW560612 EST315660 DSIR Medicago truncatula cDNA clone pDSIR-27B20, mRNA
sequence
Length = 527
Score = 137 bits (69), Expect = 2e-030
Identities = 216/265 (81%)
Strand = Plus / Plus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 223 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 282
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 283 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 342
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 343 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 402
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| | |||||| || |||||||| || |||||||| || || ||||| |||||
Sbjct: 403 cctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttccagaaggacaaca 462
Query: 525 ccaaaactatatacatcactcttag 549
|||||||| ||||||||||| ||||
Sbjct: 463 ccaaaactgtatacatcacttttag 487
>gb|AL384220.1|AL384220 MtBC20F11F1 MtBC Medicago truncatula cDNA clone MtBC20F11 T3, mRNA
sequence
Length = 499
Score = 137 bits (69), Expect = 2e-030
Identities = 216/265 (81%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 433 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 374
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 373 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 314
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 313 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 254
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| | |||||| || |||||||| || |||||||| || || ||||| |||||
Sbjct: 253 cctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttccagaaggacaaca 194
Query: 525 ccaaaactatatacatcactcttag 549
|||||||| ||||||||||| ||||
Sbjct: 193 ccaaaactgtatacatcacttttag 169
>gb|BQ165442.1|BQ165442 EST611311 KVKC Medicago truncatula cDNA clone pKVKC-9C1, mRNA
sequence
Length = 715
Score = 137 bits (69), Expect = 2e-030
Identities = 216/265 (81%)
Strand = Plus / Plus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 156 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 215
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 216 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 275
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 276 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 335
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| | |||||| || |||||||| || |||||||| || || ||||| |||||
Sbjct: 336 cctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttccagaaggacaaca 395
Query: 525 ccaaaactatatacatcactcttag 549
|||||||| ||||||||||| ||||
Sbjct: 396 ccaaaactgtatacatcacttttag 420
>gb|AL384221.1|AL384221 MtBC20F11R1 MtBC Medicago truncatula cDNA clone MtBC20F11 T7, mRNA
sequence
Length = 549
Score = 135 bits (68), Expect = 9e-030
Identities = 212/260 (81%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 262 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 203
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 202 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 143
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 142 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 83
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| | |||||| || |||||||| || |||||||| || || ||||| |||||
Sbjct: 82 cctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttccagaaggacaaca 23
Query: 525 ccaaaactatatacatcact 544
|||||||| |||||||||||
Sbjct: 22 ccaaaactgtatacatcact 3
>gb|CX534205.1|CX534205 s13dNF0TF09MJ075_322169 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 389
Score = 97.6 bits (49), Expect = 2e-018
Identities = 151/185 (81%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 191 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 132
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 131 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 72
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| || || || || || || ||| ||||||||||||| || || ||||||||||||
Sbjct: 71 cactgcctgactttatcctcactgagttttggtgtagcccaagtaaccagactctgctgt 12
Query: 465 cccct 469
|||||
Sbjct: 11 cccct 7
>gb|AW125976.2|AW125976 N100171e rootphos(-) Medicago truncatula cDNA clone MHRP-2H4, mRNA
sequence
Length = 498
Score = 81.8 bits (41), Expect = 1e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 420 tcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggcaatgta 479
||||| || |||||||| |||||||| || |||||||| |||||||| | |||| |||
Sbjct: 145 tcttcacttagtcttggagtagcccatgtgacaagactttgctgtcctcgaggcatggta 86
Query: 480 tggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatataca 539
|| || ||||||||||| || || | ||||||||||||||||| |||||||| || |||
Sbjct: 85 tgatcaacaggtttcctacctgtaaggagctcaagaagaacaacaccaaaactgtaaaca 26
Query: 540 tcact 544
|||||
Sbjct: 25 tcact 21
>gb|AL384150.1|AL384150 MtBC20B09F1 MtBC Medicago truncatula cDNA clone MtBC20B09 T3, mRNA
sequence
Length = 498
Score = 81.8 bits (41), Expect = 1e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 420 tcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggcaatgta 479
||||| || |||||||| |||||||| || |||||||| |||||||| | |||| |||
Sbjct: 404 tcttcacttagtcttggagtagcccatgtgacaagactttgctgtcctcgaggcatggta 345
Query: 480 tggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatataca 539
|| || ||||||||||| || || | ||||||||||||||||| |||||||| || |||
Sbjct: 344 tgatcaacaggtttcctacctgtaaggagctcaagaagaacaacaccaaaactgtaaaca 285
Query: 540 tcact 544
|||||
Sbjct: 284 tcact 280
>gb|BF638165.1|BF638165 NF043A04PL1F1023 Phosphate starved leaf Medicago truncatula cDNA
clone NF043A04PL 5', mRNA sequence
Length = 773
Score = 81.8 bits (41), Expect = 1e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 420 tcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggcaatgta 479
||||| || |||||||| |||||||| || |||||||| |||||||| | |||| |||
Sbjct: 531 tcttcacttagtcttggagtagcccatgtgacaagactttgctgtcctcgaggcatggta 472
Query: 480 tggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatataca 539
|| || ||||||||||| || || | ||||||||||||||||| |||||||| || |||
Sbjct: 471 tgatcaacaggtttcctacctgtaaggagctcaagaagaacaacaccaaaactgtaaaca 412
Query: 540 tcact 544
|||||
Sbjct: 411 tcact 407
>gb|CA919918.1|CA919918 EST637636 MTUS Medicago truncatula cDNA clone MTUS-20F12, mRNA
sequence
Length = 740
Score = 81.8 bits (41), Expect = 1e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 420 tcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggcaatgta 479
||||| || |||||||| |||||||| || |||||||| |||||||| | |||| |||
Sbjct: 437 tcttcacttagtcttggagtagcccatgtgacaagactttgctgtcctcgaggcatggta 496
Query: 480 tggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatataca 539
|| || ||||||||||| || || | ||||||||||||||||| |||||||| || |||
Sbjct: 497 tgatcaacaggtttcctacctgtaaggagctcaagaagaacaacaccaaaactgtaaaca 556
Query: 540 tcact 544
|||||
Sbjct: 557 tcact 561
>gb|CA920914.1|CA920914 EST638632 MTUS Medicago truncatula cDNA clone MTUS-33B4, mRNA
sequence
Length = 645
Score = 81.8 bits (41), Expect = 1e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 420 tcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggcaatgta 479
||||| || |||||||| |||||||| || |||||||| |||||||| | |||| |||
Sbjct: 469 tcttcacttagtcttggagtagcccatgtgacaagactttgctgtcctcgaggcatggta 528
Query: 480 tggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatataca 539
|| || ||||||||||| || || | ||||||||||||||||| |||||||| || |||
Sbjct: 529 tgatcaacaggtttcctacctgtaaggagctcaagaagaacaacaccaaaactgtaaaca 588
Query: 540 tcact 544
|||||
Sbjct: 589 tcact 593
>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence
Length = 105161
Score = 73.8 bits (37), Expect = 3e-011
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
|||||||||||||| | ||| | |||||| || |||||||| || |||||||| || ||
Sbjct: 23469 agactctgctgtcctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttcc 23410
Query: 513 agaagaacaaccccaaaactatatacatcactcttag 549
||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 23409 agaaggacaacaccaaaactgtatacatcacttttag 23373
Score = 42.1 bits (21), Expect = 0.10
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| |||||||||||||| || | ||| || ||||| ||||| ||||||||
Sbjct: 24202 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaa 24150
Score = 40.1 bits (20), Expect = 0.40
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 360 gcaacagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttg 419
||||||||||| || || || || ||||| ||||||| ||||||||||| || || ||
Sbjct: 23703 gcaacagcttttggtgggtattctcctcctagtcttgtatcaacacactgcctgacttta 23644
Query: 420 tcttcgctaagtcttggtgtagcc 443
|| || || ||| |||||||||||
Sbjct: 23643 tcctcactgagttttggtgtagcc 23620
>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence
Length = 106528
Score = 73.8 bits (37), Expect = 3e-011
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
|||||||||||||| | ||| | |||||| || |||||||| || |||||||| || ||
Sbjct: 69837 agactctgctgtcctcgtggtagtgtatgatcaacaggttttcttccagtcaaaagttcc 69778
Query: 513 agaagaacaaccccaaaactatatacatcactcttag 549
||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 69777 agaaggacaacaccaaaactgtatacatcacttttag 69741
Score = 42.1 bits (21), Expect = 0.10
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| |||||||||||||| || | ||| || ||||| ||||| ||||||||
Sbjct: 70570 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaa 70518
Score = 40.1 bits (20), Expect = 0.40
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 360 gcaacagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttg 419
||||||||||| || || || || ||||| ||||||| ||||||||||| || || ||
Sbjct: 70071 gcaacagcttttggtgggtattctcctcctagtcttgtatcaacacactgcctgacttta 70012
Query: 420 tcttcgctaagtcttggtgtagcc 443
|| || || ||| |||||||||||
Sbjct: 70011 tcctcactgagttttggtgtagcc 69988
>gb|AL373043.1|AL373043 MtBA55C10R1 MtBA Medicago truncatula cDNA clone MtBA55C10 T7, mRNA
sequence
Length = 433
Score = 65.9 bits (33), Expect = 7e-009
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| || | ||| || ||||| ||||| |||||||| || ||
Sbjct: 138 ttgactacaatgctcatgttaggtctgaaatcagcttcatattgcacacacaatgcagca 79
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
||||| || | ||| ||||||||||| || || || || ||||| ||||||| ||||||
Sbjct: 78 acagcagccatcttggcaacagcttttggtgggtattctcctcctagtcttgtatcaaca 19
Query: 405 cactg 409
|||||
Sbjct: 18 cactg 14
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence
Length = 117577
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 498 ccagtcaacagctcaagaagaacaaccccaaaactatatacatcact 544
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 92570 ccagtcaaaagttcaagaagaacaacaccaaaactataaacatcact 92524
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 61.9 bits (31), Expect = 1e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 450 acaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagc 509
|||||||| |||||||| | |||| ||||| || ||||||||||| || || | |||
Sbjct: 49402 acaagactttgctgtcctcgaggcatggtatgatcaacaggtttcctacctgtaaggagc 49343
Query: 510 tcaagaagaacaaccccaaaactatatacatcact 544
|||||||||||||| |||||||| || ||||||||
Sbjct: 49342 tcaagaagaacaacaccaaaactgtaaacatcact 49308
>gb|AC153124.12| Medicago truncatula clone mth2-21e10, WORKING DRAFT SEQUENCE, 5 ordered
pieces
Length = 95728
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 498 ccagtcaacagctcaagaagaacaaccccaaaactatatacatcact 544
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 23061 ccagtcaaaagttcaagaagaacaacaccaaaactataaacatcact 23015
>gb|BG645026.1|BG645026 EST506645 KV3 Medicago truncatula cDNA clone pKV3-39C19 5' end,
mRNA sequence
Length = 742
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 489 ggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatatacatcactctt 547
||||||||||| || | ||||| || |||||||| ||||||||||| |||||||||||
Sbjct: 678 ggtttcctccccgttagaagctctagtagaacaactccaaaactataaacatcactctt 620
>gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete sequence
Length = 129388
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 489 ggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatatacatcactctt 547
||||||||||| || | ||||| || |||||||| ||||||||||| |||||||||||
Sbjct: 76104 ggtttcctccccgttagaagctctagtagaacaactccaaaactataaacatcactctt 76046
>gb|AW560890.1|AW560890 EST315938 DSIR Medicago truncatula cDNA clone pDSIR-30C8, mRNA
sequence
Length = 591
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 526 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 467
Query: 987 aa 988
||
Sbjct: 466 aa 465
>gb|AW574209.1|AW574209 EST316800 GVN Medicago truncatula cDNA clone pGVN-51P3, mRNA
sequence
Length = 719
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 540 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 481
Query: 987 aa 988
||
Sbjct: 480 aa 479
>gb|BE321431.1|BE321431 NF025B12IN1F1093 Insect herbivory Medicago truncatula cDNA clone
NF025B12IN 5', mRNA sequence
Length = 639
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 564 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 505
Query: 987 aa 988
||
Sbjct: 504 aa 503
>gb|BE997907.1|BE997907 EST429630 GVSN Medicago truncatula cDNA clone pGVSN-8G4, mRNA
sequence
Length = 623
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 548 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 489
Query: 987 aa 988
||
Sbjct: 488 aa 487
>gb|BE999504.1|BE999504 EST431227 GVSN Medicago truncatula cDNA clone pGVSN-16N19, mRNA
sequence
Length = 435
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 216 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 157
Query: 987 aa 988
||
Sbjct: 156 aa 155
>gb|BF521245.1|BF521245 EST458656 DSIL Medicago truncatula cDNA clone pDSIL-41L23, mRNA
sequence
Length = 572
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 559 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 500
Query: 987 aa 988
||
Sbjct: 499 aa 498
>gb|BF647943.1|BF647943 NF013F07EC1F1061 Elicited cell culture Medicago truncatula cDNA
clone NF013F07EC 5', mRNA sequence
Length = 655
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 530 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 471
Query: 987 aa 988
||
Sbjct: 470 aa 469
>gb|AW684813.2|AW684813 NF021D05NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF021D05NR 5', mRNA sequence
Length = 675
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 514 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 455
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 454 ggttgcttactggaatccaacttttt 429
>gb|BE326096.2|BE326096 NF086E12ST1F1088 Developing stem Medicago truncatula cDNA clone
NF086E12ST 5', mRNA sequence
Length = 600
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 546 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 487
Query: 987 aa 988
||
Sbjct: 486 aa 485
>gb|BE248184.2|BE248184 NF002E08DT1F1055 Drought Medicago truncatula cDNA clone NF002E08DT
5', mRNA sequence
Length = 381
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 128 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 69
Query: 987 aa 988
||
Sbjct: 68 aa 67
>gb|BG447963.1|BG447963 NF104D07EC1F1060 Elicited cell culture Medicago truncatula cDNA
clone NF104D07EC 5', mRNA sequence
Length = 665
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 554 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 495
Query: 987 aa 988
||
Sbjct: 494 aa 493
>gb|BG453804.1|BG453804 NF094E02LF1F1008 Developing leaf Medicago truncatula cDNA clone
NF094E02LF 5', mRNA sequence
Length = 665
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 380 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 321
Query: 987 aa 988
||
Sbjct: 320 aa 319
>gb|BG645889.1|BG645889 EST507508 KV3 Medicago truncatula cDNA clone pKV3-47J16 5' end,
mRNA sequence
Length = 772
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 424 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 365
Query: 987 aa 988
||
Sbjct: 364 aa 363
>gb|BG648020.1|BG648020 EST509639 HOGA Medicago truncatula cDNA clone pHOGA-18H7 5' end, mRNA
sequence
Length = 572
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 433 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 374
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 373 ggttgcttactggaatccaacttttt 348
>gb|BG648098.1|BG648098 EST509717 HOGA Medicago truncatula cDNA clone pHOGA-18F22 5' end,
mRNA sequence
Length = 750
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 501 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 442
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 441 ggttgcttactggaatccaacttttt 416
>gb|BI265071.1|BI265071 NF078E03IN1F1023 Insect herbivory Medicago truncatula cDNA clone
NF078E03IN 5', mRNA sequence
Length = 610
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 423 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 364
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 363 ggttgcttactggaatccaacttttt 338
>gb|BI272492.1|BI272492 NF026H02FL1F1027 Developing flower Medicago truncatula cDNA clone
NF026H02FL 5', mRNA sequence
Length = 418
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 177 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 118
Query: 987 aa 988
||
Sbjct: 117 aa 116
>gb|BM780119.1|BM780119 EST590695 KV2 Medicago truncatula cDNA clone pKV2-54E1, mRNA sequence
Length = 608
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 494 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 435
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 434 ggttgcttactggaatccaacttttt 409
>gb|BQ149074.1|BQ149074 NF087E07FL1F1054 Developing flower Medicago truncatula cDNA clone
NF087E07FL 5', mRNA sequence
Length = 472
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 356 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 297
Query: 987 aa 988
||
Sbjct: 296 aa 295
>gb|BQ149448.1|BQ149448 NF090F08FL1F1075 Developing flower Medicago truncatula cDNA clone
NF090F08FL 5', mRNA sequence
Length = 634
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 577 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 518
Query: 987 aa 988
||
Sbjct: 517 aa 516
>gb|BQ165441.1|BQ165441 EST611310 KVKC Medicago truncatula cDNA clone pKVKC-9C1, mRNA
sequence
Length = 832
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 526 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 467
Query: 987 aa 988
||
Sbjct: 466 aa 465
>gb|AJ503352.1|AJ503352 AJ503352 MTAMP Medicago truncatula cDNA clone mtgmadc120033a09,
mRNA sequence
Length = 473
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 403 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 344
Query: 987 aa 988
||
Sbjct: 343 aa 342
>gb|AJ504274.1|AJ504274 AJ504274 MTAMP Medicago truncatula cDNA clone mtgmadc120045f04, mRNA
sequence
Length = 505
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 396 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 337
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 336 ggttgcttactggaatccaacttttt 311
>gb|CB891167.1|CB891167 EST648136 KV3 Medicago truncatula cDNA clone KV3-49I22, mRNA
sequence
Length = 840
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 507 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 448
Query: 987 aa 988
||
Sbjct: 447 aa 446
>gb|CF068540.1|CF068540 EST669261 MTUS Medicago truncatula cDNA clone MTUS-9C8, mRNA
sequence
Length = 604
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 479 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 420
Query: 987 aa 988
||
Sbjct: 419 aa 418
>gb|CF068656.1|CF068656 EST669377 MTUS Medicago truncatula cDNA clone MTUS-10G7, mRNA
sequence
Length = 786
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 534 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 475
Query: 987 aa 988
||
Sbjct: 474 aa 473
>gb|AJ845814.1|AJ845814 AJ845814 MtSNF Medicago truncatula cDNA clone MtNF11C09N1, mRNA
sequence
Length = 646
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 135 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 76
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 75 ggttgcttactggaatccaacttttt 50
>gb|DW015654.1|DW015654 EST1224615 MTY Medicago truncatula cDNA clone MTYA804, mRNA sequence
Length = 683
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 582 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 523
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 522 ggttgcttactggaatccaacttttt 497
>gb|DW015937.1|DW015937 EST1224898 MTY Medicago truncatula cDNA clone MTYAB41, mRNA
sequence
Length = 904
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 927 ccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgggccaag 986
|||||||| | ||||| || ||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 602 ccaagcaattggacaaagttatcatgtttcagccttgataccattgaaacctgggccaag 543
Query: 987 aa 988
||
Sbjct: 542 aa 541
>gb|DW018674.1|DW018674 EST1227635 MTY Medicago truncatula cDNA clone MTYB954, mRNA sequence
Length = 715
Score = 52.0 bits (26), Expect = 1e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||||||||||||| |||||||| || || || ||||| | | || |||||||||
Sbjct: 462 acaacattttcatgctttagccttgatacgatggagacctgagaaagaaattcttggtct 403
Query: 999 ggctgcttgttagaatccaacttttt 1024
|| ||||| | ||||||||||||||
Sbjct: 402 ggttgcttactggaatccaacttttt 377
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 213,201
Number of Sequences: 392609
Number of extensions: 213201
Number of successful extensions: 15881
Number of sequences better than 0.5: 113
Number of HSP's better than 0.5 without gapping: 111
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15633
Number of HSP's gapped (non-prelim): 239
length of query: 1135
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1115
effective length of database: 433,880,813
effective search space: 483777106495
effective search space used: 483777106495
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)