BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2437687.2.1
         (1171 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CG950829.1|CG950829  MBELR29TFB mth2 Medicago truncatula ...    40   0.41 
gb|AW559985.1|AW559985  EST315033 DSIR Medicago truncatula c...    40   0.41 
gb|CA919151.1|CA919151  EST636869 MTUS Medicago truncatula c...    40   0.41 
gb|CF068480.1|CF068480  EST669201 MTUS Medicago truncatula c...    40   0.41 
gb|DW015185.1|DW015185  EST1224146 MTY Medicago truncatula c...    40   0.41 

>gb|CG950829.1|CG950829 MBELR29TFB mth2 Medicago truncatula genomic clone 82E10, DNA
           sequence
          Length = 885

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 701 ctggatggggaggaggaaat 720
           ||||||||||||||||||||
Sbjct: 777 ctggatggggaggaggaaat 796



>gb|AW559985.1|AW559985 EST315033 DSIR Medicago truncatula cDNA clone pDSIR-26A13, mRNA
           sequence
          Length = 720

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 caacgttgctgattaggact 581
           ||||||||||||||||||||
Sbjct: 622 caacgttgctgattaggact 603



>gb|CA919151.1|CA919151 EST636869 MTUS Medicago truncatula cDNA clone MTUS-8E8, mRNA
           sequence
          Length = 744

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 562 caacgttgctgattaggact 581
           ||||||||||||||||||||
Sbjct: 383 caacgttgctgattaggact 402



>gb|CF068480.1|CF068480 EST669201 MTUS Medicago truncatula cDNA clone MTUS-8E8, mRNA
           sequence
          Length = 739

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 caacgttgctgattaggact 581
           ||||||||||||||||||||
Sbjct: 580 caacgttgctgattaggact 561



>gb|DW015185.1|DW015185 EST1224146 MTY Medicago truncatula cDNA clone MTYA208, mRNA
           sequence
          Length = 880

 Score = 40.1 bits (20), Expect = 0.41
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 caacgttgctgattaggact 581
           ||||||||||||||||||||
Sbjct: 676 caacgttgctgattaggact 657



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 201,825
Number of Sequences: 392609
Number of extensions: 201825
Number of successful extensions: 13663
Number of sequences better than  0.5: 5
Number of HSP's better than  0.5 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13658
Number of HSP's gapped (non-prelim): 5
length of query: 1171
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1151
effective length of database: 433,880,813
effective search space: 499396815763
effective search space used: 499396815763
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)