BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.1
(1264 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF519079.1|BF519079 EST456539 DSIL Medicago truncatula c... 121 2e-025
gb|BI308637.1|BI308637 EST530047 GPOD Medicago truncatula c... 121 2e-025
gb|BQ154720.1|BQ154720 NF099G01IR1F1008 Irradiated Medicago... 121 2e-025
gb|CA922013.1|CA922013 EST639731 MTUS Medicago truncatula c... 121 2e-025
gb|CA990471.1|CA990471 EST643979 GESD Medicago truncatula c... 121 2e-025
gb|CA990480.1|CA990480 EST643988 GESD Medicago truncatula c... 121 2e-025
gb|CX523674.1|CX523674 s13dNF02F03AT029_322732 Aphid-Infect... 121 2e-025
gb|BQ165647.1|BQ165647 EST611516 KVKC Medicago truncatula c... 105 9e-021
gb|AC137820.11| Medicago truncatula clone mth2-15f9, comple... 94 3e-017
gb|BE323225.2|BE323225 NF004A06PL1F1037 Phosphate starved l... 78 2e-012
gb|CA917813.1|CA917813 EST641960 GPOD Medicago truncatula c... 78 2e-012
gb|CX539370.1|CX539370 s13dNF70B11GS089_462000 Germinating ... 78 2e-012
gb|BE324374.2|BE324374 NF015G01PL1F1005 Phosphate starved l... 76 8e-012
gb|AC155101.19| Medicago truncatula clone mth2-139j13, comp... 74 3e-011
gb|CX528962.1|CX528962 s13dNF10H09MJ076_243984 Methyl Jasmo... 70 5e-010
gb|BI311684.1|BI311684 EST5313434 GESD Medicago truncatula ... 64 3e-008
gb|AL365525.1|AL365525 MtBA01A02F3 MtBA Medicago truncatula... 56 7e-006
gb|AL370137.1|AL370137 MtBA36A02F1 MtBA Medicago truncatula... 56 7e-006
gb|BF518853.1|BF518853 EST456309 DSIL Medicago truncatula c... 56 7e-006
gb|CX523990.1|CX523990 s13dNF12D02AT014_447324 Aphid-Infect... 56 7e-006
gb|BF631862.1|BF631862 NF025F04DT1F1032 Drought Medicago tr... 54 3e-005
gb|AW697470.2|AW697470 NF099C02ST1F1008 Developing stem Med... 48 0.002
gb|BI308624.1|BI308624 EST530034 GPOD Medicago truncatula c... 44 0.029
gb|AC152921.8| Medicago truncatula clone mth2-102h2, comple... 40 0.45
gb|AC165276.2| Medicago truncatula chromosome 2 clone mth2-... 40 0.45
gb|AC175685.1| Medicago truncatula chromosome 2 clone mte1-... 40 0.45
>gb|BF519079.1|BF519079 EST456539 DSIL Medicago truncatula cDNA clone pDSIL-19L9, mRNA
sequence
Length = 651
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Minus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 524 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 465
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 464 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 405
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 404 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 345
Query: 978 a 978
|
Sbjct: 344 a 344
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 242 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 183
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 182 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 123
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 122 agaacaaagcagcaagccctgcgagtggagg 92
>gb|BI308637.1|BI308637 EST530047 GPOD Medicago truncatula cDNA clone pGPOD-7O2 5' end,
mRNA sequence
Length = 760
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Minus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 719 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 660
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 659 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 600
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 599 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 540
Query: 978 a 978
|
Sbjct: 539 a 539
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 437 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 378
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 377 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 318
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 317 agaacaaagcagcaagccctgcgagtggagg 287
>gb|BQ154720.1|BQ154720 NF099G01IR1F1008 Irradiated Medicago truncatula cDNA clone
NF099G01IR 5', mRNA sequence
Length = 666
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Minus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 344 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 285
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 284 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 225
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 224 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 165
Query: 978 a 978
|
Sbjct: 164 a 164
Score = 75.8 bits (38), Expect = 8e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 621 atcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggat 680
|||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 521 atcacctgtggcattgtcattcctccagaaacaatgatttctattccttctcgaatggaa 462
Query: 681 aaattaggtcttat 694
| ||| ||||||||
Sbjct: 461 agatttggtcttat 448
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgt 1126
||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 62 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgt 16
>gb|CA922013.1|CA922013 EST639731 MTUS Medicago truncatula cDNA clone MTUS-47E10, mRNA
sequence
Length = 779
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Plus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 423 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 482
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 483 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 542
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 543 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 602
Query: 978 a 978
|
Sbjct: 603 a 603
Score = 75.8 bits (38), Expect = 8e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 621 atcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggat 680
|||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 246 atcacctgtggcattgtcattcctccagaaacaatgatttctattccttctcgaatggaa 305
Query: 681 aaattaggtcttat 694
| ||| ||||||||
Sbjct: 306 agatttggtcttat 319
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgt 1126
||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 705 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgt 751
>gb|CA990471.1|CA990471 EST643979 GESD Medicago truncatula cDNA clone GESD-28D22, mRNA
sequence
Length = 821
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Minus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 600 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 541
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 540 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 481
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 480 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 421
Query: 978 a 978
|
Sbjct: 420 a 420
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 318 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 259
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 258 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 199
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 198 agaacaaagcagcaagccctgcgagtggagg 168
>gb|CA990480.1|CA990480 EST643988 GESD Medicago truncatula cDNA clone GESD-28F22, mRNA
sequence
Length = 712
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Minus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 573 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 514
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 513 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 454
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 453 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 394
Query: 978 a 978
|
Sbjct: 393 a 393
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 291 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 232
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 231 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 172
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 171 agaacaaagcagcaagccctgcgagtggagg 141
>gb|CX523674.1|CX523674 s13dNF02F03AT029_322732 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 692
Score = 121 bits (61), Expect = 2e-025
Identities = 151/181 (83%)
Strand = Plus / Plus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 447 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 506
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 507 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 566
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 567 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 626
Query: 978 a 978
|
Sbjct: 627 a 627
Score = 75.8 bits (38), Expect = 8e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 621 atcacctgaggcatggtcattcctcctgacacaattatttcaattccttctcgaatggat 680
|||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 270 atcacctgtggcattgtcattcctccagaaacaatgatttctattccttctcgaatggaa 329
Query: 681 aaattaggtcttat 694
| ||| ||||||||
Sbjct: 330 agatttggtcttat 343
>gb|BQ165647.1|BQ165647 EST611516 KVKC Medicago truncatula cDNA clone pKVKC-10G1, mRNA
sequence
Length = 798
Score = 105 bits (53), Expect = 9e-021
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || || ||
Sbjct: 763 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataatgcca 704
Query: 858 acttctttgaaagcagtcgtattttgatctggtgaaattgcagtgctgacttgctttgat 917
|| ||||| |||||||| ||||||||||| || |||||||||| || | ||||| |||
Sbjct: 703 acctctttaaaagcagtggtattttgatccggagaaattgcagcactaatctgcttggat 644
Query: 918 gctgaatatatatgtcttacaaatggcattttctttataaaccactcgcccacccagaag 977
|| || ||||||||||| |||| ||||||| |||||| ||||| || || | |||||||
Sbjct: 643 gcagagtatatatgtctaacaaggggcatttgctttatcaaccattctccaatccagaag 584
Query: 978 a 978
|
Sbjct: 583 a 583
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 481 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 422
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 421 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 362
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 361 agaacaaagcagcaagccctgcgagtggagg 331
>gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete sequence
Length = 134674
Score = 93.7 bits (47), Expect = 3e-017
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 798 acagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacgaattattgca 857
||||||||||| ||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct: 118820 acagttgatgtaatgaagccaaaagcatattcaccaacgcgcggatgacggataattgca 118879
Query: 858 acttctttgaaagcagtcgtattttgatctg 888
|| ||||| |||||||| |||||||||||||
Sbjct: 118880 acctctttaaaagcagtggtattttgatctg 118910
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgt 1126
||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 122384 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgt 122430
Score = 44.1 bits (22), Expect = 0.029
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 909 tgctttgatgctgaatatatatgtcttacaaatggcattttctttataaaccactcgccc 968
||||| ||||| || ||||||||||| |||| ||||||| |||||| ||||| || ||
Sbjct: 121656 tgcttggatgcagagtatatatgtctaacaaggggcatttgctttatcaaccattctcca 121715
Query: 969 acccagaaga 978
| ||||||||
Sbjct: 121716 atccagaaga 121725
Score = 42.1 bits (21), Expect = 0.11
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 621 atcacctgaggcatggtcattcctcctgacacaattatttc 661
|||||||| ||||| ||||||||||| || ||||| |||||
Sbjct: 117248 atcacctgtggcattgtcattcctccagaaacaatgatttc 117288
Score = 40.1 bits (20), Expect = 0.45
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 663 attccttctcgaatggataaattaggtcttat 694
||||||||||||||||| | ||| ||||||||
Sbjct: 117523 attccttctcgaatggaaagatttggtcttat 117554
>gb|BE323225.2|BE323225 NF004A06PL1F1037 Phosphate starved leaf Medicago truncatula cDNA
clone NF004A06PL 5', mRNA sequence
Length = 373
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 337 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 278
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 277 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 218
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 217 agaacaaagcagcaagccctgcgagtggagg 187
>gb|CA917813.1|CA917813 EST641960 GPOD Medicago truncatula cDNA clone GPOD-37I6, mRNA
sequence
Length = 432
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 292 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 233
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 232 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 173
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 172 agaacaaagcagcaagccctgcgagtggagg 142
>gb|CX539370.1|CX539370 s13dNF70B11GS089_462000 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 542
Score = 77.8 bits (39), Expect = 2e-012
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 1080 tataggggactgaaaaaaccatcaacaaattgaataaaccaccatgtgatgaagaacgtg 1139
||||| ||||| || |||||||||||||| ||||||||||||||||| || || || ||
Sbjct: 487 tatagcggactaaagaaaccatcaacaaactgaataaaccaccatgtaataaaaaaggta 428
Query: 1140 actgcaacaggaaaaaggactacacatccagtcataaactttcttgagacccaactttga 1199
||||| || || || | || |||||||| ||||||||||| | || |||||||| |||
Sbjct: 427 actgcgaccgggaataaaaccacacatccggtcataaacttcttagaaacccaactctga 368
Query: 1200 agaacagcacagcatgccttgcgtgtggagg 1230
|||||| ||||| ||| |||| |||||||
Sbjct: 367 agaacaaagcagcaagccctgcgagtggagg 337
>gb|BE324374.2|BE324374 NF015G01PL1F1005 Phosphate starved leaf Medicago truncatula cDNA
clone NF015G01PL 5', mRNA sequence
Length = 346
Score = 75.8 bits (38), Expect = 8e-012
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 787 tctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgac 846
|||||||||| || | ||| || ||||||||||||||||||||||||| |||||||| |
Sbjct: 240 tctgaaggacaacggatgaggtaatgaatccaaatgcatattcaccaacacgtggatgtc 181
Query: 847 gaattattgcaacttctttgaaagcagtcgtattttgatctggtga 892
|||| || || ||||||||||| || | |||||||||||||||
Sbjct: 180 gaatgatagctacttctttgaaggcttgtgaattttgatctggtga 135
>gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete sequence
Length = 124152
Score = 73.8 bits (37), Expect = 3e-011
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
||||||||| || | ||| || ||||||||||||||||||||||||| |||||||| ||
Sbjct: 106989 ctgaaggacaacggatgaggtaatgaatccaaatgcatattcaccaacacgtggatgtcg 107048
Query: 848 aattattgcaacttctttgaa 868
||| || || |||||||||||
Sbjct: 107049 aatgatagctacttctttgaa 107069
Score = 58.0 bits (29), Expect = 2e-006
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 788 ctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatgacg 847
||||||||| |||| || || |||||||| |||||||||||||| | |||||||| ||
Sbjct: 113369 ctgaaggacaacagacgaggtgatgaatcccaatgcatattcacctacacgtggatgtcg 113428
Query: 848 aattattgcaacttctttgaa 868
||| || || |||||||||||
Sbjct: 113429 aatgatggctacttctttgaa 113449
>gb|CX528962.1|CX528962 s13dNF10H09MJ076_243984 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 611
Score = 69.9 bits (35), Expect = 5e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 810 atgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttgaaa 869
||||||||||||||||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 603 atgaatccaaatgcatattcaccaacacgtggatgtcgaatgatagctacttctttgaag 544
Query: 870 gcagtcgtattttgatctggtga 892
|| | |||||||||||||||
Sbjct: 543 gcttgtgaattttgatctggtga 521
Score = 56.0 bits (28), Expect = 7e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
||||||||||| ||||||||||||| || ||||| | ||| ||||| ||||| ||
Sbjct: 365 ccaagaccaaagatgtcgattccaagttgagcatagattggagaaaaaaatccatccacg 306
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
|| ||||| ||||||||||| ||| |||| |||| ||||| |||| ||| | ||||||
Sbjct: 305 aaatgaatgaaccaccatgttatgtagaaggtgattgcaattggaagaagaatgacacat 246
Query: 1167 ccagtcat 1174
||||||||
Sbjct: 245 ccagtcat 238
>gb|BI311684.1|BI311684 EST5313434 GESD Medicago truncatula cDNA clone pGESD13J1 5' end,
mRNA sequence
Length = 687
Score = 63.9 bits (32), Expect = 3e-008
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 785 agtctgaaggaccacagttgatgttatgaatccaaatgcatattcaccaattcgtggatg 844
|||||||||||| |||| || || |||||||| |||||||||||||| | ||||||||
Sbjct: 276 agtctgaaggacaacagacgaggtgatgaatcccaatgcatattcacctacacgtggatg 217
Query: 845 acgaattattgcaacttctttgaaagcagtcgtattttgatctggtga 892
||||| || || ||||||||||| || | |||||||||||||||
Sbjct: 216 tcgaatgatggctacttctttgaaggcttgtgaattttgatctggtga 169
>gb|AL365525.1|AL365525 MtBA01A02F3 MtBA Medicago truncatula cDNA clone MtBA01A02 T3, mRNA
sequence
Length = 491
Score = 56.0 bits (28), Expect = 7e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
||||||||||| ||||||||||||| || ||||| | ||| ||||| ||||| ||
Sbjct: 404 ccaagaccaaagatgtcgattccaagttgagcatagattggagaaaaaaatccatccacg 345
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
|| ||||| ||||||||||| ||| |||| |||| ||||| |||| ||| | ||||||
Sbjct: 344 aaatgaatgaaccaccatgttatgtagaaggtgattgcaattggaagaagaatgacacat 285
Query: 1167 ccagtcat 1174
||||||||
Sbjct: 284 ccagtcat 277
>gb|AL370137.1|AL370137 MtBA36A02F1 MtBA Medicago truncatula cDNA clone MtBA36A02 T3, mRNA
sequence
Length = 422
Score = 56.0 bits (28), Expect = 7e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
||||||||||| ||||||||||||| || ||||| | ||| ||||| ||||| ||
Sbjct: 404 ccaagaccaaagatgtcgattccaagttgagcatagattggagaaaaaaatccatccacg 345
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
|| ||||| ||||||||||| ||| |||| |||| ||||| |||| ||| | ||||||
Sbjct: 344 aaatgaatgaaccaccatgttatgtagaaggtgattgcaattggaagaagaatgacacat 285
Query: 1167 ccagtcat 1174
||||||||
Sbjct: 284 ccagtcat 277
>gb|BF518853.1|BF518853 EST456309 DSIL Medicago truncatula cDNA clone pDSIL-19A5, mRNA
sequence
Length = 401
Score = 56.0 bits (28), Expect = 7e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
||||||||||| ||||||||||||| || ||||| | ||| ||||| ||||| ||
Sbjct: 204 ccaagaccaaagatgtcgattccaagttgagcatagattggagaaaaaaatccatccacg 145
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
|| ||||| ||||||||||| ||| |||| |||| ||||| |||| ||| | ||||||
Sbjct: 144 aaatgaatgaaccaccatgttatgtagaaggtgattgcaattggaagaagaatgacacat 85
Query: 1167 ccagtcat 1174
||||||||
Sbjct: 84 ccagtcat 77
>gb|CX523990.1|CX523990 s13dNF12D02AT014_447324 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 56.0 bits (28), Expect = 7e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 1047 ccaagaccaaatatgtcgattccaatttttgcatataggggactgaaaaaaccatcaaca 1106
||||||||||| ||||||||||||| || ||||| | ||| ||||| ||||| ||
Sbjct: 409 ccaagaccaaagatgtcgattccaagttgagcatagattggagaaaaaaatccatccacg 350
Query: 1107 aattgaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacat 1166
|| ||||| ||||||||||| ||| |||| |||| ||||| |||| ||| | ||||||
Sbjct: 349 aaatgaatgaaccaccatgttatgtagaaggtgattgcaattggaagaagaatgacacat 290
Query: 1167 ccagtcat 1174
||||||||
Sbjct: 289 ccagtcat 282
>gb|BF631862.1|BF631862 NF025F04DT1F1032 Drought Medicago truncatula cDNA clone NF025F04DT
5', mRNA sequence
Length = 643
Score = 54.0 bits (27), Expect = 3e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 810 atgaatccaaatgcatattcaccaattcgtggatgacgaattattgcaacttctttgaaa 869
|||||||| |||||||||||||| | |||||||| ||||| || || |||||||||||
Sbjct: 611 atgaatcccaatgcatattcacctacacgtggatgtcgaatgatggctacttctttgaag 552
Query: 870 gcagtcgtattttgatctggtga 892
|| | |||||||||||||||
Sbjct: 551 gcttgtgaattttgatctggtga 529
>gb|AW697470.2|AW697470 NF099C02ST1F1008 Developing stem Medicago truncatula cDNA clone
NF099C02ST 5', mRNA sequence
Length = 438
Score = 48.1 bits (24), Expect = 0.002
Identities = 96/120 (80%)
Strand = Plus / Minus
Query: 1111 gaataaaccaccatgtgatgaagaacgtgactgcaacaggaaaaaggactacacatccag 1170
|||||||||||||||| || || || || ||||| || || || | || |||||||| |
Sbjct: 438 gaataaaccaccatgtaataaaaaaggtaactgcgaccgggaataaaaccacacatccgg 379
Query: 1171 tcataaactttcttgagacccaactttgaagaacagcacagcatgccttgcgtgtggagg 1230
|||||||||| | || |||||||| ||||||||| ||||| ||| |||| |||||||
Sbjct: 378 tcataaacttcttagaaacccaactctgaagaacaaagcagcaagccctgcgagtggagg 319
>gb|BI308624.1|BI308624 EST530034 GPOD Medicago truncatula cDNA clone pGPOD-7K24 5' end, mRNA
sequence
Length = 375
Score = 44.1 bits (22), Expect = 0.029
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1161 acacatccagtcataaactttcttgagacccaactttgaagaacagcacagcatgccttg 1220
|||||||| ||||||||||| | || |||||||| ||||||||| ||||| ||| ||
Sbjct: 350 acacatccggtcataaacttcttagaaacccaactctgaagaacaaagcagcaagccctg 291
Query: 1221 cgtgtggagg 1230
|| |||||||
Sbjct: 290 cgagtggagg 281
>gb|AC152921.8| Medicago truncatula clone mth2-102h2, complete sequence
Length = 110614
Score = 40.1 bits (20), Expect = 0.45
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 287 tattttttaagggaaaataa 306
||||||||||||||||||||
Sbjct: 72312 tattttttaagggaaaataa 72293
>gb|AC165276.2| Medicago truncatula chromosome 2 clone mth2-139p17, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 128631
Score = 40.1 bits (20), Expect = 0.45
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 306 aactatattttcttgaaaaa 325
||||||||||||||||||||
Sbjct: 107147 aactatattttcttgaaaaa 107128
>gb|AC175685.1| Medicago truncatula chromosome 2 clone mte1-55k6, *** SEQUENCING IN
PROGRESS ***, 8 ordered pieces
Length = 120404
Score = 40.1 bits (20), Expect = 0.45
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 306 aactatattttcttgaaaaa 325
||||||||||||||||||||
Sbjct: 108967 aactatattttcttgaaaaa 108986
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 468,368
Number of Sequences: 392609
Number of extensions: 468368
Number of successful extensions: 44306
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44170
Number of HSP's gapped (non-prelim): 119
length of query: 1264
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1244
effective length of database: 433,880,813
effective search space: 539747731372
effective search space used: 539747731372
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)