BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419405.2.1
(1293 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CG937974.1|CG937974 MBEBO56TR mth2 Medicago truncatula g... 46 0.007
gb|CG942283.1|CG942283 MBEII26TR mth2 Medicago truncatula g... 46 0.007
gb|CL314680.1|CL314680 mth2-132G12_T7 Medicago truncatula B... 46 0.007
emb|CR484642.1| mth2-152E24RM1 BAC end, cultivar Jemalong A... 46 0.007
emb|CR504944.1| mth4-1B12FM1 BAC end, cultivar Jemalong A17... 46 0.007
gb|DW016272.1|DW016272 EST1225233 MTY Medicago truncatula c... 46 0.007
gb|DW018367.1|DW018367 EST1227328 MTY Medicago truncatula c... 46 0.007
gb|AC149307.17| Medicago truncatula clone mth2-91a15, compl... 46 0.007
gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone m... 46 0.007
gb|AC153129.20| Medicago truncatula clone mth2-103o2, compl... 46 0.007
gb|CG955077.1|CG955077 MBECL60TR mth2 Medicago truncatula g... 44 0.029
gb|AW688942.1|AW688942 NF013E04ST1F1000 Developing stem Med... 44 0.029
gb|AL367148.1|AL367148 MtBA12E07F1 MtBA Medicago truncatula... 44 0.029
gb|BG647350.1|BG647350 EST508969 HOGA Medicago truncatula c... 44 0.029
gb|BG648654.1|BG648654 EST510273 HOGA Medicago truncatula c... 44 0.029
gb|BQ144139.1|BQ144139 NF046H03DT1F1032 Drought Medicago tr... 44 0.029
gb|BQ148417.1|BQ148417 NF067G10FL1F1084 Developing flower M... 44 0.029
gb|CA917931.1|CA917931 EST642078 GPOD Medicago truncatula c... 44 0.029
gb|CX533238.1|CX533238 s13dNF0DH02MJ016_319639 Methyl Jasmo... 44 0.029
gb|CX533385.1|CX533385 s13dNF0BA06MJ037_319930 Methyl Jasmo... 44 0.029
gb|CX539096.1|CX539096 s13dNF60A09GS065_461452 Germinating ... 44 0.029
gb|DW016574.1|DW016574 EST1225535 MTY Medicago truncatula c... 44 0.029
gb|DW016845.1|DW016845 EST1225806 MTY Medicago truncatula c... 44 0.029
gb|DW017270.1|DW017270 EST1226231 MTY Medicago truncatula c... 44 0.029
gb|AC135565.18| Medicago truncatula clone mth2-19b12, compl... 44 0.029
gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone m... 44 0.029
gb|AC146790.16| Medicago truncatula clone mth2-123b21, comp... 44 0.029
gb|AC147435.22| Medicago truncatula clone mth2-19c18, compl... 44 0.029
gb|AC124960.26| Medicago truncatula clone mth2-26j24, compl... 44 0.029
gb|AC142394.19| Medicago truncatula clone mth2-11d4, comple... 44 0.029
gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone m... 44 0.029
emb|CT009656.1| Medicago truncatula chromosome 5 clone mth2... 44 0.029
gb|AC163383.2| Medicago truncatula chromosome 7 clone mte1-... 44 0.029
gb|AC159124.12| Medicago truncatula clone mth2-172h20, WORK... 44 0.029
gb|CG945985.1|CG945985 MBEBS39TRB mth2 Medicago truncatula ... 42 0.12
gb|CG950267.1|CG950267 MBEEG71TR mth2 Medicago truncatula g... 42 0.12
gb|CG950773.1|CG950773 MBENT73TR mth2 Medicago truncatula g... 42 0.12
gb|BE203002.1|BE203002 EST403024 KV1 Medicago truncatula cD... 42 0.12
gb|AL374432.1|AL374432 MtBB06E12F1 MtBB Medicago truncatula... 42 0.12
gb|BF003348.1|BF003348 EST431846 KV1 Medicago truncatula cD... 42 0.12
gb|BF003612.1|BF003612 EST432110 KV1 Medicago truncatula cD... 42 0.12
gb|BF632866.1|BF632866 NF048E12DT1F1099 Drought Medicago tr... 42 0.12
gb|BF635614.1|BF635614 NF106D12DT1F1096 Drought Medicago tr... 42 0.12
gb|BF646807.1|BF646807 NF066H06EC1F1059 Elicited cell cultu... 42 0.12
gb|BG453859.1|BG453859 NF102A07LF1F1050 Developing leaf Med... 42 0.12
gb|BG455488.1|BG455488 NF059H01PL1F1014 Phosphate starved l... 42 0.12
gb|BI309649.1|BI309649 EST531059 GPOD Medicago truncatula c... 42 0.12
gb|CB891564.1|CB891564 EST648533 KV3 Medicago truncatula cD... 42 0.12
gb|CX533129.1|CX533129 s13dNF0CB11MJ089_319422 Methyl Jasmo... 42 0.12
gb|CX533179.1|CX533179 s13dNF0CH05MJ044_319521 Methyl Jasmo... 42 0.12
gb|CX533230.1|CX533230 s13dNF0DG05MJ036_319623 Methyl Jasmo... 42 0.12
gb|CX534660.1|CX534660 s13dNF78G07MJ056_331017 Methyl Jasmo... 42 0.12
gb|CX540718.1|CX540718 s13dNF56A02GS017_464714 Germinating ... 42 0.12
gb|DW015959.1|DW015959 EST1224920 MTY Medicago truncatula c... 42 0.12
gb|AC133862.6| Medicago truncatula clone mth2-30d7, complet... 42 0.12
gb|AC124957.18| Medicago truncatula clone mth2-15k14, compl... 42 0.12
gb|AC147499.5| Medicago truncatula clone mth2-22h5, complet... 42 0.12
gb|AC121241.32| Medicago truncatula clone mth2-4n3, complet... 42 0.12
gb|AC147498.14| Medicago truncatula clone mth2-6f18, comple... 42 0.12
gb|AC146749.23| Medicago truncatula clone mth2-145a1, compl... 42 0.12
gb|AC157376.2| Medicago truncatula chromosome 7 BAC clone m... 42 0.12
gb|AC144342.26| Medicago truncatula clone mth2-10n2, comple... 42 0.12
emb|CT010521.4| M.truncatula DNA sequence from clone MTH2-3... 42 0.12
emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-2... 42 0.12
gb|AC159125.9| Medicago truncatula clone mth2-189o22, WORKI... 42 0.12
gb|AC146719.32| Medicago truncatula clone mth2-17f11, compl... 42 0.12
gb|AC148470.13| Medicago truncatula clone mth2-12e8, WORKIN... 42 0.12
gb|AC146711.22| Medicago truncatula clone mth2-114d1, WORKI... 42 0.12
gb|AC175537.2| Medicago truncatula clone mth2-39i6, WORKING... 42 0.12
emb|CT025842.1| Medicago truncatula chromosome 5 clone mth2... 42 0.12
gb|AC148470.14| Medicago truncatula clone mth2-12e8, WORKIN... 42 0.12
gb|CG938726.1|CG938726 MBEFX31TF mth2 Medicago truncatula g... 40 0.46
gb|CG954273.1|CG954273 MBENR60TR mth2 Medicago truncatula g... 40 0.46
emb|CR306030.1| mte1-26K23FM1 BAC end, cultivar Jemalong A1... 40 0.46
gb|AW689463.1|AW689463 NF019E10ST1F1000 Developing stem Med... 40 0.46
gb|AW689889.1|AW689889 NF026C05ST1F1000 Developing stem Med... 40 0.46
gb|AL380035.1|AL380035 MtBB48H09F1 MtBB Medicago truncatula... 40 0.46
gb|BF632941.1|BF632941 NF051H12DT1F1104 Drought Medicago tr... 40 0.46
gb|BF641963.1|BF641963 NF012C03IN1F1019 Insect herbivory Me... 40 0.46
gb|BF650659.1|BF650659 NF099D11EC1F1092 Elicited cell cultu... 40 0.46
gb|BG454864.1|BG454864 NF108D11LF1F1091 Developing leaf Med... 40 0.46
gb|BG456756.1|BG456756 NF096C12PL1F1088 Phosphate starved l... 40 0.46
gb|BG644352.1|BG644352 EST505971 KV3 Medicago truncatula cD... 40 0.46
gb|BI263801.1|BI263801 NF093G03PL1F1024 Phosphate starved l... 40 0.46
gb|BI264376.1|BI264376 NF120H12PL1F1104 Phosphate starved l... 40 0.46
gb|BI264893.1|BI264893 NF109B08PL1F1073 Phosphate starved l... 40 0.46
gb|BI265100.1|BI265100 NF077E01IN1F1006 Insect herbivory Me... 40 0.46
gb|BI312107.1|BI312107 EST5313857 GESD Medicago truncatula ... 40 0.46
gb|BQ140733.1|BQ140733 NF042D07PH1F1062 Phoma-infected Medi... 40 0.46
gb|AJ501382.1|AJ501382 AJ501382 MTAMP Medicago truncatula c... 40 0.46
gb|CB892119.1|CB892119 EST649088 KV3 Medicago truncatula cD... 40 0.46
gb|CX533086.1|CX533086 s13dNF70E10MJ071_272449 Methyl Jasmo... 40 0.46
gb|CX533724.1|CX533724 s13dNF0LC07MJ050_320732 Methyl Jasmo... 40 0.46
gb|CX534901.1|CX534901 s13dNF0ME06MJ051_336205 Methyl Jasmo... 40 0.46
gb|AC148405.5| Medicago truncatula clone mth2-37m7, complet... 40 0.46
gb|AC148290.3| Medicago truncatula chromosome 2 BAC clone m... 40 0.46
gb|AC136954.14| Medicago truncatula clone mth2-7i1, complet... 40 0.46
gb|AC144564.12| Medicago truncatula clone mth2-17n4, comple... 40 0.46
gb|AC174277.7| Medicago truncatula clone mth2-5i22, WORKING... 40 0.46
gb|AC135313.9| Medicago truncatula clone mth2-7n18, WORKING... 40 0.46
>gb|CG937974.1|CG937974 MBEBO56TR mth2 Medicago truncatula genomic clone 20J15, DNA sequence
Length = 904
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 186 tatcatcatcatcttcttcttct 164
>gb|CG942283.1|CG942283 MBEII26TR mth2 Medicago truncatula genomic clone 62E3, DNA sequence
Length = 817
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 502 tatcatcatcatcttcttcttct 480
>gb|CL314680.1|CL314680 mth2-132G12_T7 Medicago truncatula BAC end sequences Medicago
truncatula genomic 5', DNA sequence
Length = 625
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 184 tatcatcatcatcttcttcttct 162
>emb|CR484642.1| mth2-152E24RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 574
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 190 tatcatcatcatcttcttcttct 168
>emb|CR504944.1| mth4-1B12FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 520
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 103 tatcatcatcatcttcttcttct 81
>gb|DW016272.1|DW016272 EST1225233 MTY Medicago truncatula cDNA clone MTYAF22, mRNA sequence
Length = 765
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 419 tatcatcatcatcttcttcttct 441
>gb|DW018367.1|DW018367 EST1227328 MTY Medicago truncatula cDNA clone MTYB573, mRNA sequence
Length = 610
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 424 tatcatcatcatcttcttcttct 446
>gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete sequence
Length = 136553
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 59762 tatcatcatcatcttcttcttct 59740
>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence
Length = 127058
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttct 1227
|||||||||||||||||||||||
Sbjct: 26875 tatcatcatcatcttcttcttct 26853
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence
Length = 111951
Score = 46.1 bits (23), Expect = 0.007
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttctcc 1229
|||||||||||||||||||||||
Sbjct: 97263 tcatcatcatcttcttcttctcc 97241
>gb|CG955077.1|CG955077 MBECL60TR mth2 Medicago truncatula genomic clone 26J24, DNA sequence
Length = 726
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 257 atcatcatcatcttcttcttct 236
>gb|AW688942.1|AW688942 NF013E04ST1F1000 Developing stem Medicago truncatula cDNA clone
NF013E04ST 5', mRNA sequence
Length = 397
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 193 atcatcatcatcttcttcttct 172
>gb|AL367148.1|AL367148 MtBA12E07F1 MtBA Medicago truncatula cDNA clone MtBA12E07 T3, mRNA
sequence
Length = 269
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 192 atcatcatcatcttcttcttct 171
>gb|BG647350.1|BG647350 EST508969 HOGA Medicago truncatula cDNA clone pHOGA-16L7 5' end, mRNA
sequence
Length = 668
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 522 atcatcatcatcatcttcttctccat 497
>gb|BG648654.1|BG648654 EST510273 HOGA Medicago truncatula cDNA clone pHOGA-23M2 5' end, mRNA
sequence
Length = 708
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 467 atcatcatcatcttcttcttct 446
>gb|BQ144139.1|BQ144139 NF046H03DT1F1032 Drought Medicago truncatula cDNA clone NF046H03DT
5', mRNA sequence
Length = 792
Score = 44.1 bits (22), Expect = 0.029
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1193 ttataatctctatatcatcatcatcttcttcttc 1226
||||||||||||| | ||| ||||||||||||||
Sbjct: 225 ttataatctctatttgatcttcatcttcttcttc 258
>gb|BQ148417.1|BQ148417 NF067G10FL1F1084 Developing flower Medicago truncatula cDNA clone
NF067G10FL 5', mRNA sequence
Length = 666
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 613 atcatcatcatcatcttcttctccat 588
>gb|CA917931.1|CA917931 EST642078 GPOD Medicago truncatula cDNA clone GPOD-37B22, mRNA
sequence
Length = 811
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 461 atcatcatcatcatcttcttctccat 486
>gb|CX533238.1|CX533238 s13dNF0DH02MJ016_319639 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 642
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 622 atcatcatcatcatcttcttctccat 597
>gb|CX533385.1|CX533385 s13dNF0BA06MJ037_319930 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 633
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 618 atcatcatcatcatcttcttctccat 593
>gb|CX539096.1|CX539096 s13dNF60A09GS065_461452 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 601
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 394 atcatcatcatcatcttcttctccat 369
>gb|DW016574.1|DW016574 EST1225535 MTY Medicago truncatula cDNA clone MTYAI92, mRNA sequence
Length = 752
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 417 atcatcatcatcttcttcttct 396
>gb|DW016845.1|DW016845 EST1225806 MTY Medicago truncatula cDNA clone MTYAM32, mRNA sequence
Length = 667
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 639 atcatcatcatcatcttcttctccat 614
>gb|DW017270.1|DW017270 EST1226231 MTY Medicago truncatula cDNA clone MTYAR56, mRNA sequence
Length = 763
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 587 atcatcatcatcatcttcttctccat 562
>gb|AC135565.18| Medicago truncatula clone mth2-19b12, complete sequence
Length = 121647
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1205 tatcatcatcatcttcttcttc 1226
||||||||||||||||||||||
Sbjct: 53678 tatcatcatcatcttcttcttc 53657
>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete sequence
Length = 126437
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 108118 atcatcatcatcttcttcttct 108097
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence
Length = 114449
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 71283 atcatcatcatcttcttcttct 71262
>gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete sequence
Length = 137284
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 97823 atcatcatcatcatcttcttctccat 97798
>gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete sequence
Length = 125894
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 297 atcatcatcatcttcttcttct 276
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttct 1227
|||||||||||||||||||||
Sbjct: 33448 tcatcatcatcttcttcttct 33428
>gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete sequence
Length = 111262
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttctccat 1231
|||||||||||| |||||||||||||
Sbjct: 107485 atcatcatcatcatcttcttctccat 107460
>gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone mte1-60l24, complete
sequence
Length = 107210
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 80012 atcatcatcatcttcttcttct 79991
>emb|CT009656.1| Medicago truncatula chromosome 5 clone mth2-154o18, WORKING DRAFT
SEQUENCE
Length = 107180
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 57892 atcatcatcatcttcttcttct 57871
>gb|AC163383.2| Medicago truncatula chromosome 7 clone mte1-56p23, *** SEQUENCING IN
PROGRESS ***, 3 ordered pieces
Length = 79137
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 51828 atcatcatcatcttcttcttct 51807
>gb|AC159124.12| Medicago truncatula clone mth2-172h20, WORKING DRAFT SEQUENCE, 2
ordered pieces
Length = 117155
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1206 atcatcatcatcttcttcttct 1227
||||||||||||||||||||||
Sbjct: 56487 atcatcatcatcttcttcttct 56508
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1207 tcatcatcatcttcttcttct 1227
|||||||||||||||||||||
Sbjct: 23336 tcatcatcatcttcttcttct 23356
>gb|CG945985.1|CG945985 MBEBS39TRB mth2 Medicago truncatula genomic clone 22H5, DNA sequence
Length = 842
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttct 1227
|||||||||||||||||||||
Sbjct: 482 tcatcatcatcttcttcttct 462
>gb|CG950267.1|CG950267 MBEEG71TR mth2 Medicago truncatula genomic clone 37L21, DNA sequence
Length = 613
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1207 tcatcatcatcttcttcttct 1227
|||||||||||||||||||||
Sbjct: 194 tcatcatcatcttcttcttct 214
>gb|CG950773.1|CG950773 MBENT73TR mth2 Medicago truncatula genomic clone 10N2, DNA sequence
Length = 955
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1207 tcatcatcatcttcttcttct 1227
|||||||||||||||||||||
Sbjct: 740 tcatcatcatcttcttcttct 760
>gb|BE203002.1|BE203002 EST403024 KV1 Medicago truncatula cDNA clone pKV1-3L14, mRNA sequence
Length = 647
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1209 atcatcatcttcttcttctcc 1229
|||||||||||||||||||||
Sbjct: 10 atcatcatcttcttcttctcc 30
>gb|AL374432.1|AL374432 MtBB06E12F1 MtBB Medicago truncatula cDNA clone MtBB06E12 T3, mRNA
sequence
Length = 492
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1209 atcatcatcttcttcttctcc 1229
|||||||||||||||||||||
Sbjct: 7 atcatcatcttcttcttctcc 27
>gb|BF003348.1|BF003348 EST431846 KV1 Medicago truncatula cDNA clone pKV1-5D1, mRNA sequence
Length = 670
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1209 atcatcatcttcttcttctcc 1229
|||||||||||||||||||||
Sbjct: 15 atcatcatcttcttcttctcc 35
>gb|BF003612.1|BF003612 EST432110 KV1 Medicago truncatula cDNA clone pKV1-7N16, mRNA sequence
Length = 467
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttctccat 1231
||||||||||| |||||||||||||
Sbjct: 129 tcatcatcatcatcttcttctccat 105
>gb|BF632866.1|BF632866 NF048E12DT1F1099 Drought Medicago truncatula cDNA clone NF048E12DT
5', mRNA sequence
Length = 680
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttctccat 1231
||||||||||| |||||||||||||
Sbjct: 677 tcatcatcatcatcttcttctccat 653
>gb|BF635614.1|BF635614 NF106D12DT1F1096 Drought Medicago truncatula cDNA clone NF106D12DT
5', mRNA sequence
Length = 451
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttctccat 1231
||||||||||| |||||||||||||
Sbjct: 120 tcatcatcatcatcttcttctccat 96
>gb|BF646807.1|BF646807 NF066H06EC1F1059 Elicited cell culture Medicago truncatula cDNA clone
NF066H06EC 5', mRNA sequence
Length = 627
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1209 atcatcatcttcttcttctcc 1229
|||||||||||||||||||||
Sbjct: 19 atcatcatcttcttcttctcc 39
>gb|BG453859.1|BG453859 NF102A07LF1F1050 Developing leaf Medicago truncatula cDNA clone
NF102A07LF 5', mRNA sequence
Length = 664
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1206 atcatcatcatcttcttcttctcca 1230
||||||||||||||| |||||||||
Sbjct: 12 atcatcatcatcttcatcttctcca 36
>gb|BG455488.1|BG455488 NF059H01PL1F1014 Phosphate starved leaf Medicago truncatula cDNA
clone NF059H01PL 5', mRNA sequence
Length = 662
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1203 tatatcatcatcatcttcttcttct 1227
|||||||||||||||| ||||||||
Sbjct: 66 tatatcatcatcatctccttcttct 90
>gb|BI309649.1|BI309649 EST531059 GPOD Medicago truncatula cDNA clone pGPOD-13P17 5' end,
mRNA sequence
Length = 557
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttctccat 1231
||||||||||| |||||||||||||
Sbjct: 89 tcatcatcatcatcttcttctccat 65
>gb|CB891564.1|CB891564 EST648533 KV3 Medicago truncatula cDNA clone KV3-50J4, mRNA sequence
Length = 560
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1207 tcatcatcatcttcttcttctccat 1231
||||||||||| |||||||||||||
Sbjct: 467 tcatcatcatcatcttcttctccat 443
>gb|CX533129.1|CX533129 s13dNF0CB11MJ089_319422 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 667
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1209 atcatcatcttcttcttctcc 1229
|||||||||||||||||||||
Sbjct: 11 atcatcatcttcttcttctcc 31
>gb|CX533179.1|CX533179 s13dNF0CH05MJ044_319521 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 627
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1209 atcatcatcttcttcttctcc 1229
|||||||||||||||||||||
Sbjct: 24 atcatcatcttcttcttctcc 44
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 313,790
Number of Sequences: 392609
Number of extensions: 313790
Number of successful extensions: 25375
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24883
Number of HSP's gapped (non-prelim): 481
length of query: 1293
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1273
effective length of database: 433,880,813
effective search space: 552330274949
effective search space used: 552330274949
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)