BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419155.2.3
(1354 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI271356.1|BI271356 NF014H12FL1F1103 Developing flower M... 194 1e-047
gb|BF004930.1|BF004930 EST433491 DSLC Medicago truncatula c... 192 5e-047
gb|BQ124111.1|BQ124111 EST609687 GLSD Medicago truncatula c... 192 5e-047
gb|BQ146456.1|BQ146456 NF084C01FL1F1006 Developing flower M... 192 5e-047
gb|DW015485.1|DW015485 EST1224446 MTY Medicago truncatula c... 192 5e-047
gb|AW776628.1|AW776628 EST335693 DSIL Medicago truncatula c... 190 2e-046
gb|BE124047.1|BE124047 EST394172 DSIL Medicago truncatula c... 176 3e-042
gb|BF004929.1|BF004929 EST433490 DSLC Medicago truncatula c... 161 2e-037
gb|CA916812.1|CA916812 EST640959 GPOD Medicago truncatula c... 159 7e-037
gb|AW684991.1|AW684991 NF024A04NR1F1000 Nodulated root Medi... 157 3e-036
gb|BE942851.1|BE942851 EST422430 MGHG Medicago truncatula c... 157 3e-036
gb|BG457276.1|BG457276 NF101H06PL1F1058 Phosphate starved l... 157 3e-036
gb|BQ149245.1|BQ149245 NF088F10FL1F1091 Developing flower M... 157 3e-036
gb|BI271527.1|BI271527 NF057F06FL1F1059 Developing flower M... 143 4e-032
gb|BQ149244.1|BQ149244 NF088F10FL1F1090 Developing flower M... 119 6e-025
gb|BF649910.1|BF649910 NF081F10EC1F1089 Elicited cell cultu... 109 6e-022
gb|CX540787.1|CX540787 s13dNF56G12GS100_464852 Germinating ... 103 4e-020
gb|CA918765.1|CA918765 EST636483 MTUS Medicago truncatula c... 96 9e-018
gb|CA922107.1|CA922107 EST639825 MTUS Medicago truncatula c... 90 6e-016
emb|CR494479.1| mth2-168K9RM1 BAC end, cultivar Jemalong A1... 72 1e-010
emb|CR478464.1| mth2-188K19FM1 BAC end, cultivar Jemalong A... 68 2e-009
gb|CG966494.1|CG966494 MBEFU23TF mth2 Medicago truncatula g... 56 8e-006
gb|AJ498460.1|AJ498460 AJ498460 MTPOSE Medicago truncatula ... 56 8e-006
gb|CX535277.1|CX535277 s13dNF37F12MJ103_388730 Methyl Jasmo... 48 0.002
gb|BE203309.1|BE203309 EST403331 KV1 Medicago truncatula cD... 46 0.008
gb|BI311711.1|BI311711 EST5313461 GESD Medicago truncatula ... 46 0.008
gb|DW017244.1|DW017244 EST1226205 MTY Medicago truncatula c... 46 0.008
gb|AW689871.1|AW689871 NF026A12ST1F1000 Developing stem Med... 44 0.031
gb|AL365922.1|AL365922 MtBA03B11F1 MtBA Medicago truncatula... 44 0.031
gb|BQ155172.1|BQ155172 NF076H08IR1F1076 Irradiated Medicago... 42 0.12
gb|AJ496814.1|AJ496814 AJ496814 MTFLOW Medicago truncatula ... 42 0.12
gb|AJ497372.1|AJ497372 AJ497372 MTFLOW Medicago truncatula ... 42 0.12
gb|CA918766.1|CA918766 EST636484 MTUS Medicago truncatula c... 42 0.12
gb|CG953880.1|CG953880 MBEHS87TR mth2 Medicago truncatula g... 40 0.48
emb|CR324632.1| mte1-51J16FM1 BAC end, cultivar Jemalong A1... 40 0.48
emb|CR337875.1| mte1-69L15RM1 BAC end, cultivar Jemalong A1... 40 0.48
emb|CR341595.1| mte1-74A13FM1 BAC end, cultivar Jemalong A1... 40 0.48
gb|AL365923.1|AL365923 MtBA03B11R2 MtBA Medicago truncatula... 40 0.48
>gb|BI271356.1|BI271356 NF014H12FL1F1103 Developing flower Medicago truncatula cDNA clone
NF014H12FL 5', mRNA sequence
Length = 699
Score = 194 bits (98), Expect = 1e-047
Identities = 211/249 (84%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 410 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 469
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 470 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 529
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 530 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 589
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 590 tgcttggatctcgtcattattctaccccagttgatgtttggtcagtgggatgtatatttg 649
Query: 825 cggaaatgg 833
| ||||||
Sbjct: 650 canaaatgg 658
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagat 270
|||||||| ||||| ||||||||||||||
Sbjct: 66 atggagcaatacgaaaaggtggagaagat 94
>gb|BF004930.1|BF004930 EST433491 DSLC Medicago truncatula cDNA clone pDSLC-28L12, mRNA
sequence
Length = 567
Score = 192 bits (97), Expect = 5e-047
Identities = 205/241 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 104 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 163
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 164 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 223
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 224 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 283
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 284 tgcttggatctcgtcattattctaccccagttgatgtttggtcagtgggatgtatatttg 343
Query: 825 c 825
|
Sbjct: 344 c 344
>gb|BQ124111.1|BQ124111 EST609687 GLSD Medicago truncatula cDNA clone pGLSD-34G18, mRNA
sequence
Length = 730
Score = 192 bits (97), Expect = 5e-047
Identities = 205/241 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 356 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 415
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 416 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 475
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 476 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 535
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 536 tgcttggatctcgtcattattctaccccagttgatgtttggtcagtgggatgtatatttg 595
Query: 825 c 825
|
Sbjct: 596 c 596
>gb|BQ146456.1|BQ146456 NF084C01FL1F1006 Developing flower Medicago truncatula cDNA clone
NF084C01FL 5', mRNA sequence
Length = 627
Score = 192 bits (97), Expect = 5e-047
Identities = 205/241 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 228 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 287
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 288 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 347
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 348 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 407
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 408 tgcttggatctcgtcattattctaccccagttgatgtttggtcagtgggatgtatatttg 467
Query: 825 c 825
|
Sbjct: 468 c 468
>gb|DW015485.1|DW015485 EST1224446 MTY Medicago truncatula cDNA clone MTYA577, mRNA
sequence
Length = 877
Score = 192 bits (97), Expect = 5e-047
Identities = 205/241 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 188 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 247
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 248 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 307
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 308 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 367
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 368 tgcttggatctcgtcattattctaccccagttgatgtttggtcagtgggatgtatatttg 427
Query: 825 c 825
|
Sbjct: 428 c 428
>gb|AW776628.1|AW776628 EST335693 DSIL Medicago truncatula cDNA clone pDSIL-11C19, mRNA
sequence
Length = 754
Score = 190 bits (96), Expect = 2e-046
Identities = 204/240 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 471 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 530
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 531 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 590
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 591 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 650
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 651 tgcttggatctcgtcattattctaccccagttgatgtttggtcagtgggatgtatatttg 710
Score = 44.1 bits (22), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| ||||| |||||||||||||| || || || || ||||| || || ||||||
Sbjct: 128 atggagcaatacgaaaaggtggagaagattggtgaaggaacatacggcgtcgtttacaag 187
Query: 302 gc 303
||
Sbjct: 188 gc 189
>gb|BE124047.1|BE124047 EST394172 DSIL Medicago truncatula cDNA clone pDSIL-12C14, mRNA
sequence
Length = 623
Score = 176 bits (89), Expect = 3e-042
Identities = 185/217 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 405 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 464
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 465 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 524
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 525 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 584
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgt 801
|||||||| | | || ||||| || |||||||||||
Sbjct: 585 tgcttggatctcgtcattattctaccccagttgatgt 621
Score = 44.1 bits (22), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| ||||| |||||||||||||| || || || || ||||| || || ||||||
Sbjct: 62 atggagcaatacgaaaaggtggagaagattggtgaaggaacatacggcgtcgtttacaag 121
Query: 302 gc 303
||
Sbjct: 122 gc 123
>gb|BF004929.1|BF004929 EST433490 DSLC Medicago truncatula cDNA clone pDSLC-28L10, mRNA
sequence
Length = 550
Score = 161 bits (81), Expect = 2e-037
Identities = 201/241 (83%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| || || || | ||
Sbjct: 104 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacacaatttgtgga 163
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||| ||||| ||||| || |||||||||||||| |
Sbjct: 164 tagatcgacgtactaattcacttaagctagcagattttggattggccagggcatttggta 223
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | |||||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 224 ttcctgtcagaacatttacacatgaggtagttacactgtggtaccgagctccggaaatat 283
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || ||||| || ||||||||||| |||| ||||| ||||| ||||
Sbjct: 284 tgcttggatctcgtcattattctaccccagttgatgttcggtcagtgggatgtatatttg 343
Query: 825 c 825
|
Sbjct: 344 c 344
>gb|CA916812.1|CA916812 EST640959 GPOD Medicago truncatula cDNA clone GPOD-34C3, mRNA
sequence
Length = 669
Score = 159 bits (80), Expect = 7e-037
Identities = 162/188 (86%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 440 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 499
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
||||||| || |||||| |||| ||||||||||| ||||| || |||||||||||||| |
Sbjct: 500 tagatcgacgtactaattcacttaagcttgcagattttggattggccagggcatttggta 559
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||||| | || ||||| ||||||||||| ||| | |||||| ||||||| |||||
Sbjct: 560 ttcctgtcagaac-tttacacatgaggtagttacactgtggtaccgagctccggaaatat 618
Query: 765 tgcttgga 772
||||||||
Sbjct: 619 tgcttgga 626
Score = 44.1 bits (22), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| ||||| |||||||||||||| || || || || ||||| || || ||||||
Sbjct: 97 atggagcaatacgaaaaggtggagaagattggtgaaggaacatacggcgtcgtttacaag 156
Query: 302 gc 303
||
Sbjct: 157 gc 158
>gb|AW684991.1|AW684991 NF024A04NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF024A04NR 5', mRNA sequence
Length = 555
Score = 157 bits (79), Expect = 3e-036
Identities = 160/187 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 197 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 256
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 257 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 316
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
||||||| | |||||||| |||||||| |||||| | ||||||||||||||||||||
Sbjct: 317 ttcctgttaggacatttacacatgaggtggtgacactctggtacagagctccagaaatat 376
Query: 765 tgcttgg 771
|||||||
Sbjct: 377 tgcttgg 383
>gb|BE942851.1|BE942851 EST422430 MGHG Medicago truncatula cDNA clone pMGHG-9D18, mRNA
sequence
Length = 614
Score = 157 bits (79), Expect = 3e-036
Identities = 160/187 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 410 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 469
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 470 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 529
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
||||||| | |||||||| |||||||| |||||| | ||||||||||||||||||||
Sbjct: 530 ttcctgttaggacatttacacatgaggtggtgacactgtggtacagagctccagaaatat 589
Query: 765 tgcttgg 771
|||||||
Sbjct: 590 tgcttgg 596
Score = 48.1 bits (24), Expect = 0.002
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||| ||||||||||| || |||||||| || || || || ||||| ||||| ||||||
Sbjct: 67 atggaacagtacgagaaagttgagaagataggtgaaggtacatacggtgtggtttacaag 126
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|| | ||| || ||||| ||||||||||| | |||||||| || || ||||||||
Sbjct: 127 gctcgtgaccgtgctaccaatgagacgatcgctttgaagaagattcgtcttgagcaggaa 186
Query: 362 gacgaggg 369
|| |||||
Sbjct: 187 gatgaggg 194
>gb|BG457276.1|BG457276 NF101H06PL1F1058 Phosphate starved leaf Medicago truncatula cDNA
clone NF101H06PL 5', mRNA sequence
Length = 666
Score = 157 bits (79), Expect = 3e-036
Identities = 160/187 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 418 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 477
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 478 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 537
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
||||||| | |||||||| |||||||| |||||| | ||||||||||||||||||||
Sbjct: 538 ttcctgttaggacatttacacatgaggtggtgacactctggtacagagctccagaaatat 597
Query: 765 tgcttgg 771
|||||||
Sbjct: 598 tgcttgg 604
>gb|BQ149245.1|BQ149245 NF088F10FL1F1091 Developing flower Medicago truncatula cDNA clone
NF088F10FL 5', mRNA sequence
Length = 636
Score = 157 bits (79), Expect = 3e-036
Identities = 160/187 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 439 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 498
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 499 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 558
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
||||||| | |||||||| |||||||| |||||| | ||||||||||||||||||||
Sbjct: 559 ttcctgttaggacatttacacatgaggtggtgacactctggtacagagctccagaaatat 618
Query: 765 tgcttgg 771
|||||||
Sbjct: 619 tgcttgg 625
Score = 48.1 bits (24), Expect = 0.002
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||| ||||||||||| || |||||||| || || || || ||||| ||||| ||||||
Sbjct: 96 atggaacagtacgagaaagttgagaagataggtgaaggtacatacggtgtggtttacaag 155
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|| | ||| || ||||| ||||||||||| | |||||||| || || ||||||||
Sbjct: 156 gctcgtgaccgtgctaccaatgagacgatcgctttgaagaagattcgtcttgagcaggaa 215
Query: 362 gacgaggg 369
|| |||||
Sbjct: 216 gatgaggg 223
>gb|BI271527.1|BI271527 NF057F06FL1F1059 Developing flower Medicago truncatula cDNA clone
NF057F06FL 5', mRNA sequence
Length = 660
Score = 143 bits (72), Expect = 4e-032
Identities = 158/187 (84%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 431 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 490
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 491 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 550
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
||||||| | |||||||| ||||||| |||||| | ||||||||||||||| ||||
Sbjct: 551 ttcctgttaggacatttacacatgagggggtgacactctggtacagagctccanaaatat 610
Query: 765 tgcttgg 771
|||||||
Sbjct: 611 tgcttgg 617
Score = 48.1 bits (24), Expect = 0.002
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||| ||||||||||| || |||||||| || || || || ||||| ||||| ||||||
Sbjct: 88 atggaacagtacgagaaagttgagaagataggtgaaggtacatacggtgtggtttacaag 147
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|| | ||| || ||||| ||||||||||| | |||||||| || || ||||||||
Sbjct: 148 gctcgtgaccgtgctaccaatgagacgatcgctttgaagaagattcgtcttgagcaggaa 207
Query: 362 gacgaggg 369
|| |||||
Sbjct: 208 gatgaggg 215
>gb|BQ149244.1|BQ149244 NF088F10FL1F1090 Developing flower Medicago truncatula cDNA clone
NF088F10FL 5', mRNA sequence
Length = 698
Score = 119 bits (60), Expect = 6e-025
Identities = 154/187 (82%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 439 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 498
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 499 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 558
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
|||||| |||||||| ||||| | |||||| | |||||||||||| || ||||
Sbjct: 559 ttcctgntangacatttacacatgaagnggtgacactctggtacagagctncanaaatat 618
Query: 765 tgcttgg 771
|||||||
Sbjct: 619 tgcttgg 625
Score = 48.1 bits (24), Expect = 0.002
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||| ||||||||||| || |||||||| || || || || ||||| ||||| ||||||
Sbjct: 96 atggaacagtacgagaaagttgagaagataggtgaaggtacatacggtgtggtttacaag 155
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|| | ||| || ||||| ||||||||||| | |||||||| || || ||||||||
Sbjct: 156 gctcgtgaccgtgctaccaatgagacgatcgctttgaagaagattcgtcttgagcaggaa 215
Query: 362 gacgaggg 369
|| |||||
Sbjct: 216 gatgaggg 223
>gb|BF649910.1|BF649910 NF081F10EC1F1089 Elicited cell culture Medicago truncatula cDNA
clone NF081F10EC 5', mRNA sequence
Length = 575
Score = 109 bits (55), Expect = 6e-022
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||| |||||||||||||||||||| |||| |||||||| ||||| | ||||
Sbjct: 437 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaatctgttga 496
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || ||||||| || ||||||||||| ||||| || ||||||||||||||||
Sbjct: 497 ttgatcgcagctctaatgcgctaaagcttgcagattttggattggccagggcatttggaa 556
Query: 705 ttcctgt 711
|||||||
Sbjct: 557 ttcctgt 563
>gb|CX540787.1|CX540787 s13dNF56G12GS100_464852 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 514
Score = 103 bits (52), Expect = 4e-020
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| || ||||
Sbjct: 410 ttgcttactgccattcacatagagttcttcatcgagacttgaaaccacagaatttgttga 469
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttgg 684
||||||| || |||||| |||| ||||||||||| |||||
Sbjct: 470 tagatcgacgtactaattcacttaagcttgcagattttgg 509
Score = 44.1 bits (22), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| ||||| |||||||||||||| || || || || ||||| || || ||||||
Sbjct: 67 atggagcaatacgaaaaggtggagaagattggtgaaggaacatacggcgtcgtttacaag 126
Query: 302 gc 303
||
Sbjct: 127 gc 128
>gb|CA918765.1|CA918765 EST636483 MTUS Medicago truncatula cDNA clone MTUS-2H7, mRNA
sequence
Length = 613
Score = 95.6 bits (48), Expect = 9e-018
Identities = 114/136 (83%)
Strand = Plus / Minus
Query: 690 ccagggcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtaca 749
||||||||||||| ||||||||| | |||||||| ||||||||||| ||| | ||||||
Sbjct: 593 ccagggcatttggtattcctgtcagaacatttacacatgaggtagttacactgtggtacc 534
Query: 750 gagctccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctg 809
||||||| ||||| |||||||| | | || ||||| || ||||||||||| ||||| |
Sbjct: 533 gagctccggaaatattgcttggatctcgtcattattctaccccagttgatgtttggtcag 474
Query: 810 tgggctgtatctttgc 825
|||| ||||| |||||
Sbjct: 473 tgggatgtatatttgc 458
>gb|CA922107.1|CA922107 EST639825 MTUS Medicago truncatula cDNA clone MTUS-49C4, mRNA
sequence
Length = 781
Score = 89.7 bits (45), Expect = 6e-016
Identities = 303/389 (77%)
Strand = Plus / Minus
Query: 657 ctaatgcactgaagcttgcagactttggtttagccagggcatttggaattcctgtccgta 716
||||||| || ||||||||||| |||| ||| ||||| |||||||||||||| | |
Sbjct: 775 ctaatgcgctaaagcttgcagattttgatttgcccaggcattttggaattcctgttagga 716
Query: 717 catttactcatgaggtagtgacattatggtacagagctccagaaattctgcttggagcga 776
|||| |||||||| |||||| | || ||||||||||||||||| ||||||| |
Sbjct: 715 cattacaccatgaggtggtgacactctgttacagagctccagaaatattgcttgggtctc 656
Query: 777 ggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtga 836
| || ||||| || || |||||||| ||||| ||||| || || ||||| || ||| | |
Sbjct: 655 gtcattattctaccccggttgatgtctggtcagtgggatgcatatttgcagagatgataa 596
Query: 837 accaaaagccactattccctggcgattctgagatcgacgaactttttaagatattcagga 896
||||| |||||| ||||| || || |||||||| || ||| | ||||| |||||||| |
Sbjct: 595 accaacggccacttttcccaggggactctgagattgatgaattgtttaaaatattcagaa 536
Query: 897 tactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
| ||||||||||||||| | | ||||| ||||| | || |||||||| || ||
Sbjct: 535 tcacgggtacaccgaatgaggaaacatggcctggagtgacttcattgcctgattttaaat 476
Query: 957 cagctttccccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctg 1016
|||| || |||| ||||| |||| ||||||||||||| |||||||||||| || || |
Sbjct: 475 cagcctttcccaagtggccagctaaggacctggcaactcaagtcccaaatctggagccag 416
Query: 1017 ctgggttggaccttctctctaaaatgctt 1045
|||| | || ||||| ||||| ||||||
Sbjct: 415 ctggtcttgatcttctatctaatatgctt 387
>emb|CR494479.1| mth2-168K9RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 504
Score = 71.9 bits (36), Expect = 1e-010
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 669 agcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttactcatg 728
|||||||||| ||||| || ||||||||||||||||||||||| | |||||||| ||||
Sbjct: 1 agcttgcagattttggattggccagggcatttggaattcctgttaggacatttacacatg 60
Query: 729 aggt 732
||||
Sbjct: 61 aggt 64
>emb|CR478464.1| mth2-188K19FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 582
Score = 67.9 bits (34), Expect = 2e-009
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 671 cttgcagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgag 730
|||||||| ||||| || ||||||||||||||||||||||| | |||||||| ||||||
Sbjct: 3 cttgcagattttggattggccagggcatttggaattcctgttaggacatttacacatgag 62
Query: 731 gt 732
||
Sbjct: 63 gt 64
>gb|CG966494.1|CG966494 MBEFU23TF mth2 Medicago truncatula genomic clone 47C21, DNA
sequence
Length = 734
Score = 56.0 bits (28), Expect = 8e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaa 636
|||| ||||| |||||||||||||||||||| |||| |||||||| |||||
Sbjct: 88 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaa 37
>gb|AJ498460.1|AJ498460 AJ498460 MTPOSE Medicago truncatula cDNA clone mt--acc955205a10,
mRNA sequence
Length = 540
Score = 56.0 bits (28), Expect = 8e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaa 636
|||| ||||| |||||||||||||||||||| |||| |||||||| |||||
Sbjct: 474 ttgcttactgtcattctcatagagttcttcatagagacttgaaaccacagaa 525
Score = 48.1 bits (24), Expect = 0.002
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||| ||||||||||| || |||||||| || || || || ||||| ||||| ||||||
Sbjct: 131 atggaacagtacgagaaagttgagaagataggtgaaggtacatacggtgtggtttacaag 190
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|| | ||| || ||||| ||||||||||| | |||||||| || || ||||||||
Sbjct: 191 gctcgtgaccgtgctaccaatgagacgatcgctttgaagaagattcgtcttgagcaggaa 250
Query: 362 gacgaggg 369
|| |||||
Sbjct: 251 gatgaggg 258
>gb|CX535277.1|CX535277 s13dNF37F12MJ103_388730 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 443
Score = 48.1 bits (24), Expect = 0.002
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
||||| ||||||||||| || |||||||| || || || || ||||| ||||| ||||||
Sbjct: 59 atggaacagtacgagaaagttgagaagataggtgaaggtacatacggtgtggtttacaag 118
Query: 302 gcgctggacaaggccaccaacgagacgatcgcgctcaagaagatccgcctcgagcaggag 361
|| | ||| || ||||| ||||||||||| | |||||||| || || ||||||||
Sbjct: 119 gctcgtgaccgtgctaccaatgagacgatcgctttgaagaagattcgtcttgagcaggaa 178
Query: 362 gacgaggg 369
|| |||||
Sbjct: 179 gatgaggg 186
Score = 46.1 bits (23), Expect = 0.008
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 585 ttgcgtactgccattctcatagagttcttca 615
|||| ||||| ||||||||||||||||||||
Sbjct: 402 ttgcttactgtcattctcatagagttcttca 432
>gb|BE203309.1|BE203309 EST403331 KV1 Medicago truncatula cDNA clone pKV1-5I21, mRNA
sequence
Length = 592
Score = 46.1 bits (23), Expect = 0.008
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 794 gttgatgtgtggtctgtgggctgtatctttgcggaaatggtga 836
|||||| | |||||||| || ||||||||||| ||||||||||
Sbjct: 354 gttgatatttggtctgttggatgtatctttgctgaaatggtga 396
>gb|BI311711.1|BI311711 EST5313461 GESD Medicago truncatula cDNA clone pGESD13N21 5' end,
mRNA sequence
Length = 832
Score = 46.1 bits (23), Expect = 0.008
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 794 gttgatgtgtggtctgtgggctgtatctttgcggaaatggtga 836
|||||| | |||||||| || ||||||||||| ||||||||||
Sbjct: 593 gttgatatttggtctgttggatgtatctttgctgaaatggtga 635
>gb|DW017244.1|DW017244 EST1226205 MTY Medicago truncatula cDNA clone MTYAR25, mRNA
sequence
Length = 630
Score = 46.1 bits (23), Expect = 0.008
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 794 gttgatgtgtggtctgtgggctgtatctttgcggaaatggtga 836
|||||| | |||||||| || ||||||||||| ||||||||||
Sbjct: 126 gttgatatttggtctgttggatgtatctttgctgaaatggtga 168
>gb|AW689871.1|AW689871 NF026A12ST1F1000 Developing stem Medicago truncatula cDNA clone
NF026A12ST 5', mRNA sequence
Length = 496
Score = 44.1 bits (22), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| ||||| |||||||||||||| || || || || ||||| || || ||||||
Sbjct: 118 atggagcaatacgaaaaggtggagaagattggtgaaggaacatacggcgtcgtttacaag 177
Query: 302 gc 303
||
Sbjct: 178 gc 179
>gb|AL365922.1|AL365922 MtBA03B11F1 MtBA Medicago truncatula cDNA clone MtBA03B11 T3, mRNA
sequence
Length = 477
Score = 44.1 bits (22), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 242 atggagcagtacgagaaggtggagaagatcggggagggcacgtacggggtggtgtacaag 301
|||||||| ||||| |||||||||||||| || || || || ||||| || || ||||||
Sbjct: 118 atggagcaatacgaaaaggtggagaagattggtgaaggaacatacggcgtcgtttacaag 177
Query: 302 gc 303
||
Sbjct: 178 gc 179
>gb|BQ155172.1|BQ155172 NF076H08IR1F1076 Irradiated Medicago truncatula cDNA clone
NF076H08IR 5', mRNA sequence
Length = 637
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 604 tagagttcttcaccgagatttgaaa 628
||||||| |||||||||||||||||
Sbjct: 107 tagagttattcaccgagatttgaaa 131
>gb|AJ496814.1|AJ496814 AJ496814 MTFLOW Medicago truncatula cDNA clone mt--abc955100a09, mRNA
sequence
Length = 287
Score = 42.1 bits (21), Expect = 0.12
Identities = 135/173 (78%)
Strand = Plus / Plus
Query: 848 ctattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggtaca 907
||||||||||| ||||| ||||| || || | ||||| |||||||| || | ||||||
Sbjct: 52 ctattccctggggattccgagattgatgagttatttaaaatattcagaatcttgggtaca 111
Query: 908 ccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttcccc 967
|| ||||| | | ||||||||||| | || |||||||| || || || | || |||
Sbjct: 112 ccaaatgaagatacatggccaggagtaacttcattgcctgattttaaatcaacatttccc 171
Query: 968 aggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgg 1020
||||||| | || ||||||| ||||| || || ||||||||||| || |||||
Sbjct: 172 aggtggccatctaaggacctagcaaccgtggttccaaatcttgagccagctgg 224
>gb|AJ497372.1|AJ497372 AJ497372 MTFLOW Medicago truncatula cDNA clone mt--abc955108d08, mRNA
sequence
Length = 538
Score = 42.1 bits (21), Expect = 0.12
Identities = 135/173 (78%)
Strand = Plus / Plus
Query: 848 ctattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggtaca 907
||||||||||| ||||| ||||| || || | ||||| |||||||| || | ||||||
Sbjct: 78 ctattccctggggattccgagattgatgagttatttaaaatattcagaatcttgggtaca 137
Query: 908 ccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttcccc 967
|| ||||| | | ||||||||||| | || |||||||| || || || | || |||
Sbjct: 138 ccaaatgaagatacatggccaggagtaacttcattgcctgattttaaatcaacatttccc 197
Query: 968 aggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgg 1020
||||||| | || ||||||| ||||| || || ||||||||||| || |||||
Sbjct: 198 aggtggccatctaaggacctagcaaccgtggttccaaatcttgagccagctgg 250
>gb|CA918766.1|CA918766 EST636484 MTUS Medicago truncatula cDNA clone MTUS-2H8, mRNA
sequence
Length = 581
Score = 42.1 bits (21), Expect = 0.12
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 699 ttggaattcctgtccgtacatttactcatgaggtagt 735
|||| ||||||||| | |||||||| |||||||||||
Sbjct: 581 ttggtattcctgtcagaacatttacacatgaggtagt 545
Score = 42.1 bits (21), Expect = 0.12
Identities = 135/173 (78%)
Strand = Plus / Minus
Query: 848 ctattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggtaca 907
||||||||||| ||||| ||||| || || | ||||| |||||||| || | ||||||
Sbjct: 433 ctattccctggggattccgagattgatgagttatttaaaatattcagaatcttgggtaca 374
Query: 908 ccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttcccc 967
|| ||||| | | ||||||||||| | || |||||||| || || || | || |||
Sbjct: 373 ccaaatgaagatacatggccaggagtaacttcattgcctgattttaaatcaacatttccc 314
Query: 968 aggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgg 1020
||||||| | || ||||||| ||||| || || ||||||||||| || |||||
Sbjct: 313 aggtggccatctaaggacctagcaaccgtggttccaaatcttgagccagctgg 261
Score = 40.1 bits (20), Expect = 0.48
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgc 825
||||| || ||||||||||| ||||| ||||| ||||| |||||
Sbjct: 499 tattctaccccagttgatgtttggtcagtgggatgtatatttgc 456
>gb|CG953880.1|CG953880 MBEHS87TR mth2 Medicago truncatula genomic clone 58P5, DNA sequence
Length = 858
Score = 40.1 bits (20), Expect = 0.48
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgc 825
||||| || ||||||||||| ||||| ||||| ||||| |||||
Sbjct: 98 tattctaccccagttgatgtttggtcagtgggatgtatatttgc 141
>emb|CR324632.1| mte1-51J16FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 689
Score = 40.1 bits (20), Expect = 0.48
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgc 825
||||| || ||||||||||| ||||| ||||| ||||| |||||
Sbjct: 341 tattctaccccagttgatgtttggtcagtgggatgtatatttgc 298
>emb|CR337875.1| mte1-69L15RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 315
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 gcagactttggtttagccag 693
||||||||||||||||||||
Sbjct: 296 gcagactttggtttagccag 315
>emb|CR341595.1| mte1-74A13FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 665
Score = 40.1 bits (20), Expect = 0.48
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 782 tattccacaccagttgatgtgtggtctgtgggctgtatctttgc 825
||||| || ||||||||||| ||||| ||||| ||||| |||||
Sbjct: 354 tattctaccccagttgatgtttggtcagtgggatgtatatttgc 311
>gb|AL365923.1|AL365923 MtBA03B11R2 MtBA Medicago truncatula cDNA clone MtBA03B11 T7, mRNA
sequence
Length = 494
Score = 40.1 bits (20), Expect = 0.48
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgg 1020
|||||||||| | || ||||||| ||||| || || ||||||||||| || |||||
Sbjct: 30 cccaggtggccatctaaggacctagcaaccgtggttccaaatcttgagccagctgg 85
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 242,019
Number of Sequences: 392609
Number of extensions: 242019
Number of successful extensions: 18538
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18446
Number of HSP's gapped (non-prelim): 75
length of query: 1354
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1334
effective length of database: 433,880,813
effective search space: 578797004542
effective search space used: 578797004542
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)