BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405110.2.1
(945 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW685468.1|AW685468 NF030B04NR1F1000 Nodulated root Medi... 157 2e-036
gb|BE203469.1|BE203469 EST403491 KV1 Medicago truncatula cD... 157 2e-036
gb|BF003380.1|BF003380 EST431878 KV1 Medicago truncatula cD... 157 2e-036
gb|BG647015.1|BG647015 EST508634 HOGA Medicago truncatula c... 157 2e-036
gb|BQ255160.1|BQ255160 MTNAG49TKM KVKC Medicago truncatula ... 157 2e-036
gb|CX529695.1|CX529695 s13dNF50F09MJ076_245436 Methyl Jasmo... 157 2e-036
gb|DW017671.1|DW017671 EST1226632 MTY Medicago truncatula c... 157 2e-036
gb|AW773957.1|AW773957 EST332943 KV3 Medicago truncatula cD... 155 8e-036
gb|AW980464.1|AW980464 EST391617 GVN Medicago truncatula cD... 155 8e-036
gb|BG581524.1|BG581524 EST483258 GVN Medicago truncatula cD... 155 8e-036
gb|BG447731.1|BG447731 NF093C12EC1F1098 Elicited cell cultu... 151 1e-034
gb|AW561027.1|AW561027 EST316075 DSIR Medicago truncatula c... 141 1e-031
gb|AJ501255.1|AJ501255 AJ501255 MTAMP Medicago truncatula c... 139 5e-031
gb|CA920475.1|CA920475 EST638193 MTUS Medicago truncatula c... 135 8e-030
gb|AC146747.7| Medicago truncatula clone mth2-14h5, complet... 133 3e-029
gb|BE204647.1|BE204647 EST397323 KV0 Medicago truncatula cD... 42 0.084
gb|BF647079.1|BF647079 NF006A10EC1F1070 Elicited cell cultu... 42 0.084
gb|AW687804.2|AW687804 NF013F07RT1F1062 Developing root Med... 42 0.084
gb|BI271155.1|BI271155 NF007C12FL1F1098 Developing flower M... 42 0.084
gb|BM779662.1|BM779662 EST590238 KV2 Medicago truncatula cD... 42 0.084
gb|BM779706.1|BM779706 EST590282 KV2 Medicago truncatula cD... 42 0.084
gb|BQ141508.1|BQ141508 NF020D05PH1F1046 Phoma-infected Medi... 42 0.084
gb|AJ501634.1|AJ501634 AJ501634 MTAMP Medicago truncatula c... 42 0.084
gb|CA920876.1|CA920876 EST638594 MTUS Medicago truncatula c... 42 0.084
gb|CX519737.1|CX519737 s13dNF52B02VI013_443526 Virus-Infect... 42 0.084
gb|CX520659.1|CX520659 s13dNF61D09VI076_449104 Virus-Infect... 42 0.084
gb|CX531819.1|CX531819 s13dNF87H06MJ048_257580 Methyl Jasmo... 42 0.084
gb|DW016896.1|DW016896 EST1225857 MTY Medicago truncatula c... 42 0.084
gb|AC149600.1| Medicago truncatula chromosome 2 clone mte1-... 42 0.084
>gb|AW685468.1|AW685468 NF030B04NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF030B04NR 5', mRNA sequence
Length = 657
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 439 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 380
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 379 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 320
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 319 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 260
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 259 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 200
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 199 ggttcaaaggggtatccatcggg 177
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 502 cccatctcaaccagtttctgtaccttatcttc 471
>gb|BE203469.1|BE203469 EST403491 KV1 Medicago truncatula cDNA clone pKV1-5N17, mRNA
sequence
Length = 572
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 497 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 438
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 437 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 378
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 377 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 318
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 317 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 258
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 257 ggttcaaaggggtatccatcggg 235
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 560 cccatctcaaccagtttctgtaccttatcttc 529
>gb|BF003380.1|BF003380 EST431878 KV1 Medicago truncatula cDNA clone pKV1-5N17, mRNA
sequence
Length = 563
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 499 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 440
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 439 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 380
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 379 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 320
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 319 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 260
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 259 ggttcaaaggggtatccatcggg 237
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 562 cccatctcaaccagtttctgtaccttatcttc 531
>gb|BG647015.1|BG647015 EST508634 HOGA Medicago truncatula cDNA clone pHOGA-15M24 5' end,
mRNA sequence
Length = 775
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 545 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 486
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 485 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 426
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 425 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 366
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 365 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 306
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 305 ggttcaaaggggtatccatcggg 283
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 608 cccatctcaaccagtttctgtaccttatcttc 577
>gb|BQ255160.1|BQ255160 MTNAG49TKM KVKC Medicago truncatula cDNA clone pKVKC-7E1, mRNA
sequence
Length = 758
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 558 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 499
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 498 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 439
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 438 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 379
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 378 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 319
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 318 ggttcaaaggggtatccatcggg 296
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 621 cccatctcaaccagtttctgtaccttatcttc 590
>gb|CX529695.1|CX529695 s13dNF50F09MJ076_245436 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 661
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 481 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 422
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 421 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 362
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 361 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 302
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 301 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 242
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 241 ggttcaaaggggtatccatcggg 219
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 544 cccatctcaaccagtttctgtaccttatcttc 513
>gb|DW017671.1|DW017671 EST1226632 MTY Medicago truncatula cDNA clone MTYAW55, mRNA
sequence
Length = 660
Score = 157 bits (79), Expect = 2e-036
Identities = 217/263 (82%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 583 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 524
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 523 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgtacggaaagt 464
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 463 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 404
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 403 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 344
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 343 ggttcaaaggggtatccatcggg 321
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 646 cccatctcaaccagtttctgtaccttatcttc 615
>gb|AW773957.1|AW773957 EST332943 KV3 Medicago truncatula cDNA clone pKV3-16N7, mRNA
sequence
Length = 656
Score = 155 bits (78), Expect = 8e-036
Identities = 183/218 (83%)
Strand = Plus / Plus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 425 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 484
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 485 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 544
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 545 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 604
Query: 599 gctccattttggctgctgatgttagggtgccatacttt 636
|| ||||||||||||||||| || |||||||| |||||
Sbjct: 605 gcaccattttggctgctgatatttgggtgccagacttt 642
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 362 cccatctcaaccagtttctgtaccttatcttc 393
>gb|AW980464.1|AW980464 EST391617 GVN Medicago truncatula cDNA clone pGVN-30L18, mRNA
sequence
Length = 630
Score = 155 bits (78), Expect = 8e-036
Identities = 183/218 (83%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 222 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 163
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 162 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 103
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 102 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 43
Query: 599 gctccattttggctgctgatgttagggtgccatacttt 636
|| ||||||||||||||||| || |||||||| |||||
Sbjct: 42 gcaccattttggctgctgatatttgggtgccagacttt 5
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 285 cccatctcaaccagtttctgtaccttatcttc 254
>gb|BG581524.1|BG581524 EST483258 GVN Medicago truncatula cDNA clone pGVN-65I11 5' end,
mRNA sequence
Length = 637
Score = 155 bits (78), Expect = 8e-036
Identities = 183/218 (83%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 229 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 170
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 169 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 110
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 109 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 50
Query: 599 gctccattttggctgctgatgttagggtgccatacttt 636
|| ||||||||||||||||| || |||||||| |||||
Sbjct: 49 gcaccattttggctgctgatatttgggtgccagacttt 12
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 292 cccatctcaaccagtttctgtaccttatcttc 261
>gb|BG447731.1|BG447731 NF093C12EC1F1098 Elicited cell culture Medicago truncatula cDNA
clone NF093C12EC 5', mRNA sequence
Length = 498
Score = 151 bits (76), Expect = 1e-034
Identities = 214/261 (81%)
Strand = Plus / Minus
Query: 421 tgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggcaac 480
||||||||||||||| ||| | ||||||| ||||||| ||| || || || || ||
Sbjct: 469 tgtccagtagcgagcagtattgacaaatgtntgatagtctttcagatantgntgtgccac 410
Query: 481 aacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaaggag 540
||||||||| ||||||||||||||| ||||| |||||| || ||||| | |||||| ||
Sbjct: 409 aacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagtag 350
Query: 541 agcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaattgc 600
|||||||||| ||||| || ||||||||||||||||||| ||||||| |||||| ||
Sbjct: 349 tgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaatagc 290
Query: 601 tccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcggagg 660
||||||||||||||||| || |||||||| ||||| || ||| |||||| |||||
Sbjct: 289 accattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttggagg 230
Query: 661 ctcaaagggatatccaccggg 681
|||||||| |||||| ||||
Sbjct: 229 ttcaaaggggtatccatcggg 209
>gb|AW561027.1|AW561027 EST316075 DSIR Medicago truncatula cDNA clone pDSIR-31I21, mRNA
sequence
Length = 612
Score = 141 bits (71), Expect = 1e-031
Identities = 215/263 (81%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| ||||||| ||||||| ||| ||||| || ||
Sbjct: 542 tctgtccagtagcgagcagtattcacaaatgtctgatagtctttcagatactgctgtgcc 483
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||| ||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 482 acatcagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 423
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 422 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 363
Query: 599 gctccattttggctgctgatgttagggtgccatactttggtgatgaactgcatcttcgga 658
|| ||||||||||||||||| || |||||||| ||||| || ||| |||||| |||
Sbjct: 362 gcaccattttggctgctgatatttgggtgccagactttagttgaaaacctcatctttgga 303
Query: 659 ggctcaaagggatatccaccggg 681
|| |||||||| |||||| ||||
Sbjct: 302 ggttcaaaggggtatccatcggg 280
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 605 cccatctcaaccagtttctgtaccttatcttc 574
>gb|AJ501255.1|AJ501255 AJ501255 MTAMP Medicago truncatula cDNA clone mtgmadc120004f10,
mRNA sequence
Length = 614
Score = 139 bits (70), Expect = 5e-031
Identities = 181/218 (83%)
Strand = Plus / Minus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 543 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 484
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 483 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 424
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 423 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 364
Query: 599 gctccattttggctgctgatgttagggtgccatacttt 636
|| |||||||| ||||| || || |||||||| |||||
Sbjct: 363 gcaccattttgcctgcttatatttgggtgccagacttt 326
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 606 cccatctcaaccagtttctgtaccttatcttc 575
>gb|CA920475.1|CA920475 EST638193 MTUS Medicago truncatula cDNA clone MTUS-28G1, mRNA
sequence
Length = 670
Score = 135 bits (68), Expect = 8e-030
Identities = 176/212 (83%)
Strand = Plus / Plus
Query: 419 tctgtccagtagcgagccgtagcggcaaatgttggatagtcacgcaggtactgttgggca 478
||||||||||||||||| ||| | ||||||| ||||||| ||| ||||| || ||
Sbjct: 456 tctgtccagtagcgagcagtattgacaaatgtctgatagtctttcagatactgctgtgcc 515
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 516 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 575
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || |||||||||||||||||| |||||| ||| |||
Sbjct: 576 agtgcagtcttcagagtaagtgccgggctccactgatctttccagatgtcccagccaata 635
Query: 599 gctccattttggctgctgatgttagggtgcca 630
|| ||||||||||||||||| || ||||||||
Sbjct: 636 gcaccattttggctgctgatatttgggtgcca 667
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 356 cccatctcaaccagcttctgcaccttctcttc 387
|||||||||||||| ||||| ||||| |||||
Sbjct: 393 cccatctcaaccagtttctgtaccttatcttc 424
>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence
Length = 129204
Score = 133 bits (67), Expect = 3e-029
Identities = 130/151 (86%)
Strand = Plus / Minus
Query: 479 acaacagcatcctgaggatcatcaggtgcaggagaagaaagcagagcttgaagggaaagg 538
||||||||||| ||||||||||||||| ||||| |||||| || ||||| | ||||||
Sbjct: 75852 acaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacggaaagt 75793
Query: 539 agagcagtcttcaaggtaagggctgggctccactgatctttcagaatgtccaagcaaatt 598
|| |||||||||| ||||| || ||||||||||||||||||| ||||||| ||||||
Sbjct: 75792 agtgcagtcttcagagtaagtgccgggctccactgatctttcaagatgtccaggcaaata 75733
Query: 599 gctccattttggctgctgatgttagggtgcc 629
|| ||||||||||||||||| || |||||||
Sbjct: 75732 gcaccattttggctgctgatatttgggtgcc 75702
>gb|BE204647.1|BE204647 EST397323 KV0 Medicago truncatula cDNA clone pKV0-16P10, mRNA
sequence
Length = 490
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 324 gctgggctccactgttccttcagaatgtc 296
>gb|BF647079.1|BF647079 NF006A10EC1F1070 Elicited cell culture Medicago truncatula cDNA
clone NF006A10EC 5', mRNA sequence
Length = 379
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 218 gctgggctccactgttccttcagaatgtc 190
>gb|AW687804.2|AW687804 NF013F07RT1F1062 Developing root Medicago truncatula cDNA clone
NF013F07RT 5', mRNA sequence
Length = 497
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 86 gctgggctccactgttccttcagaatgtc 58
>gb|BI271155.1|BI271155 NF007C12FL1F1098 Developing flower Medicago truncatula cDNA clone
NF007C12FL 5', mRNA sequence
Length = 642
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 328 gctgggctccactgttccttcagaatgtc 300
>gb|BM779662.1|BM779662 EST590238 KV2 Medicago truncatula cDNA clone pKV2-52P7, mRNA
sequence
Length = 688
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 420 gctgggctccactgttccttcagaatgtc 448
>gb|BM779706.1|BM779706 EST590282 KV2 Medicago truncatula cDNA clone pKV2-52H6, mRNA
sequence
Length = 723
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 420 gctgggctccactgttccttcagaatgtc 448
>gb|BQ141508.1|BQ141508 NF020D05PH1F1046 Phoma-infected Medicago truncatula cDNA clone
NF020D05PH 5', mRNA sequence
Length = 545
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 299 gctgggctccactgttccttcagaatgtc 271
>gb|AJ501634.1|AJ501634 AJ501634 MTAMP Medicago truncatula cDNA clone mtgmadc120009g04,
mRNA sequence
Length = 644
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 356 gctgggctccactgttccttcagaatgtc 328
>gb|CA920876.1|CA920876 EST638594 MTUS Medicago truncatula cDNA clone MTUS-33E10, mRNA
sequence
Length = 715
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 378 gctgggctccactgttccttcagaatgtc 406
>gb|CX519737.1|CX519737 s13dNF52B02VI013_443526 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 502
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 263 gctgggctccactgttccttcagaatgtc 235
>gb|CX520659.1|CX520659 s13dNF61D09VI076_449104 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 580
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 92 gctgggctccactgttccttcagaatgtc 64
>gb|CX531819.1|CX531819 s13dNF87H06MJ048_257580 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 667
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 330 gctgggctccactgttccttcagaatgtc 302
>gb|DW016896.1|DW016896 EST1225857 MTY Medicago truncatula cDNA clone MTYAM96, mRNA
sequence
Length = 769
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 335 gctgggctccactgttccttcagaatgtc 307
>gb|AC149600.1| Medicago truncatula chromosome 2 clone mte1-41j24, *** SEQUENCING IN
PROGRESS ***, 12 unordered pieces
Length = 151612
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 560 gctgggctccactgatctttcagaatgtc 588
|||||||||||||| || |||||||||||
Sbjct: 13890 gctgggctccactgttccttcagaatgtc 13862
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 147,355
Number of Sequences: 392609
Number of extensions: 147355
Number of successful extensions: 10042
Number of sequences better than 0.5: 29
Number of HSP's better than 0.5 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9982
Number of HSP's gapped (non-prelim): 59
length of query: 945
length of database: 441,732,993
effective HSP length: 20
effective length of query: 925
effective length of database: 433,880,813
effective search space: 401339752025
effective search space used: 401339752025
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)