BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805139.2.1
(950 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW559283.1|AW559283 EST306326 DSIR Medicago truncatula c... 88 2e-015
gb|AW559538.1|AW559538 EST314586 DSIR Medicago truncatula c... 88 2e-015
gb|AW126403.2|AW126403 N100511e rootphos(-) Medicago trunca... 88 2e-015
gb|BE203860.1|BE203860 EST396536 KV0 Medicago truncatula cD... 88 2e-015
gb|BF638624.1|BF638624 NF062F05PL1F1045 Phosphate starved l... 88 2e-015
gb|AW692114.2|AW692114 NF047H01ST1F1000 Developing stem Med... 88 2e-015
gb|BE323963.2|BE323963 NF011H02PL1F1016 Phosphate starved l... 88 2e-015
gb|BQ148732.1|BQ148732 NF080H09FL1F1080 Developing flower M... 88 2e-015
gb|AJ498553.1|AJ498553 AJ498553 MTPOSE Medicago truncatula ... 88 2e-015
gb|CB893561.1|CB893561 EST646353 HOGA Medicago truncatula c... 88 2e-015
gb|BG454148.1|BG454148 NF107C02LF1F1006 Developing leaf Med... 70 4e-010
gb|CA923157.1|CA923157 EST640875 MTUS Medicago truncatula c... 70 4e-010
gb|AL381624.1|AL381624 MtBC02A07R1 MtBC Medicago truncatula... 66 6e-009
gb|BQ149002.1|BQ149002 NF086D12FL1F1101 Developing flower M... 66 6e-009
gb|AC125482.9| Medicago truncatula clone mth2-15h11, comple... 66 6e-009
gb|BQ165388.1|BQ165388 EST611257 KVKC Medicago truncatula c... 52 9e-005
gb|BV165433.1| NTLIM-1 PCR fragment of the molecular marker... 50 3e-004
gb|BV165434.1| NTLIM-2 PCR fragment of the molecular marker... 50 3e-004
gb|BQ124953.1|BQ124953 EST610529 GLSD Medicago truncatula c... 44 0.021
gb|BQ124994.1|BQ124994 EST610570 GLSD Medicago truncatula c... 44 0.021
gb|AC174278.7| Medicago truncatula clone mth2-9d14, WORKING... 44 0.021
gb|AC149807.10| Medicago truncatula clone mth2-151h1, WORKI... 42 0.084
>gb|AW559283.1|AW559283 EST306326 DSIR Medicago truncatula cDNA clone pDSIR-25A15, mRNA
sequence
Length = 571
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 182 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 123
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 122 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 63
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 62 ttgcttagcttgagggttcctttgcagtggtg 31
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 443 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 384
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 383 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 324
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 323 aaacaactcttatggta 307
>gb|AW559538.1|AW559538 EST314586 DSIR Medicago truncatula cDNA clone pDSIR-19N4, mRNA
sequence
Length = 782
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 311 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 252
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 251 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 192
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 191 ttgcttagcttgagggttcctttgcagtggtg 160
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 572 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 513
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 512 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 453
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 452 aaacaactcttatggta 436
>gb|AW126403.2|AW126403 N100511e rootphos(-) Medicago truncatula cDNA clone MHRP-6G10, mRNA
sequence
Length = 463
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 365 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 306
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 305 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 246
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 245 ttgcttagcttgagggttcctttgcagtggtg 214
>gb|BE203860.1|BE203860 EST396536 KV0 Medicago truncatula cDNA clone pKV0-13C7, mRNA
sequence
Length = 698
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 244 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 185
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 184 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 125
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 124 ttgcttagcttgagggttcctttgcagtggtg 93
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 505 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 446
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 445 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 386
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 385 aaacaactcttatggta 369
>gb|BF638624.1|BF638624 NF062F05PL1F1045 Phosphate starved leaf Medicago truncatula cDNA
clone NF062F05PL 5', mRNA sequence
Length = 657
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 428 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 369
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 368 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 309
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 308 ttgcttagcttgagggttcctttgcagtggtg 277
>gb|AW692114.2|AW692114 NF047H01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF047H01ST 5', mRNA sequence
Length = 468
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 336 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 277
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 276 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 217
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 216 ttgcttagcttgagggttcctttgcagtggtg 185
>gb|BE323963.2|BE323963 NF011H02PL1F1016 Phosphate starved leaf Medicago truncatula cDNA
clone NF011H02PL 5', mRNA sequence
Length = 388
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 349 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 290
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 289 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 230
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 229 ttgcttagcttgagggttcctttgcagtggtg 198
>gb|BQ148732.1|BQ148732 NF080H09FL1F1080 Developing flower Medicago truncatula cDNA clone
NF080H09FL 5', mRNA sequence
Length = 645
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 296 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 237
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 236 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 177
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 176 ttgcttagcttgagggttcctttgcagtggtg 145
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 557 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 498
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 497 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 438
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 437 aaacaactcttatggta 421
>gb|AJ498553.1|AJ498553 AJ498553 MTPOSE Medicago truncatula cDNA clone mt--acc955206a09,
mRNA sequence
Length = 755
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 375 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 316
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 315 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 256
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 255 ttgcttagcttgagggttcctttgcagtggtg 224
Score = 58.0 bits (29), Expect = 1e-006
Identities = 110/137 (80%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| |
Sbjct: 636 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagaat 577
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 576 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 517
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 516 aaacaactcttatggta 500
>gb|CB893561.1|CB893561 EST646353 HOGA Medicago truncatula cDNA clone HOGA-28E14, mRNA
sequence
Length = 781
Score = 87.7 bits (44), Expect = 2e-015
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 239 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 180
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 179 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 120
Query: 726 ttggcgagcttgagggtgcccttgcagtggtg 757
||| ||||||||||| || |||||||||||
Sbjct: 119 ttgcttagcttgagggttcctttgcagtggtg 88
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 500 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 441
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 440 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 381
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 380 aaacaactcttatggta 364
>gb|BG454148.1|BG454148 NF107C02LF1F1006 Developing leaf Medicago truncatula cDNA clone
NF107C02LF 5', mRNA sequence
Length = 667
Score = 69.9 bits (35), Expect = 4e-010
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 134 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 75
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 74 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 15
Query: 726 ttg 728
|||
Sbjct: 14 ttg 12
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 395 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 336
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 335 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 276
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 275 aaacaactcttatggta 259
>gb|CA923157.1|CA923157 EST640875 MTUS Medicago truncatula cDNA clone MTUS-63G9, mRNA
sequence
Length = 720
Score = 69.9 bits (35), Expect = 4e-010
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 606 tttctttctggcttgacaaccttgggagttccttcgaagctcttgtccaagctccctgtc 665
||||||||||||||||||| || || || ||||| ||||| || || | ||| || ||
Sbjct: 594 tttctttctggcttgacaattttcggtgtcccttcaaagcttttctcaaggctaccagtt 653
Query: 666 ctcttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtag 725
|| |||||||| ||||||||||| || |||||||| || |||||||| || || ||||||
Sbjct: 654 cttttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtag 713
Query: 726 ttg 728
|||
Sbjct: 714 ttg 716
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 333 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 392
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 393 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 452
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 453 aaacaactcttatggta 469
>gb|AL381624.1|AL381624 MtBC02A07R1 MtBC Medicago truncatula cDNA clone MtBC02A07 T7, mRNA
sequence
Length = 529
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 244 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 303
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 304 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 363
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 364 aaacaactcttatggta 380
>gb|BQ149002.1|BQ149002 NF086D12FL1F1101 Developing flower Medicago truncatula cDNA clone
NF086D12FL 5', mRNA sequence
Length = 560
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 340 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 281
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 280 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 221
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 220 aaacaactcttatggta 204
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
Length = 129658
Score = 65.9 bits (33), Expect = 6e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 351 agctggctgaagttccccttctccttgatcagctggatgtggtggtgcttgcagtacagc 410
|||||||| || || ||||| | ||||||||| || || |||||||| |||||||| ||
Sbjct: 88839 agctggcttaaatttcccttttgcttgatcagttgaatatggtggtgtttgcagtagagt 88898
Query: 411 ttcccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttg 470
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| || || |||
Sbjct: 88899 tttccctcatgtgctatgtaattggaaggactgatagtacaccctccatgacaacatttg 88958
Query: 471 aagcagctcttgtggta 487
|| || ||||| |||||
Sbjct: 88959 aaacaactcttatggta 88975
Score = 56.0 bits (28), Expect = 6e-006
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 669 ttgaacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtagttg 728
|||||||| ||||||||||| || |||||||| || |||||||| || || |||||||||
Sbjct: 89624 ttgaacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtagttg 89683
>gb|BQ165388.1|BQ165388 EST611257 KVKC Medicago truncatula cDNA clone pKVKC-8G11, mRNA
sequence
Length = 699
Score = 52.0 bits (26), Expect = 9e-005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 390 tggtggtgcttgcagtacagcttcccctcgtgcgcaatgtagttagaagggctgatggtg 449
|||||||| |||||||| || || ||||| || || ||||| || ||||| ||||| ||
Sbjct: 405 tggtggtgtttgcagtagagttttccctcatgtgctatgtaattggaaggactgatagta 464
Query: 450 caccctccatggcagcacttgaagcagctcttgtggta 487
||||||||||| || || ||||| || ||||| |||||
Sbjct: 465 caccctccatgacaacatttgaaacaactcttatggta 502
>gb|BV165433.1| NTLIM-1 PCR fragment of the molecular marker, NTLIM-Mt-A17 Medicago
truncatula STS genomic, sequence tagged site
Length = 819
Score = 50.1 bits (25), Expect = 3e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 672 aacagctggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtagttg 728
||||| ||||||||||| || |||||||| || |||||||| || || |||||||||
Sbjct: 562 aacagttggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtagttg 506
>gb|BV165434.1| NTLIM-2 PCR fragment of the molecular marker, NTLIM-Mt-A20 Medicago
truncatula STS genomic, sequence tagged site
Length = 845
Score = 50.1 bits (25), Expect = 3e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 679 ggtcgaagtgaggcctgcagtagagcactccctcgaaggagttgtagttggcgagct 735
|||||||||| || |||||||| || |||||||| || || ||||||||||| ||||
Sbjct: 552 ggtcgaagtgtggtctgcagtaaagaactccctcaaaagaattgtagttggctagct 496
>gb|BQ124953.1|BQ124953 EST610529 GLSD Medicago truncatula cDNA clone pGLSD-37P15, mRNA
sequence
Length = 775
Score = 44.1 bits (22), Expect = 0.021
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 734 cttgagggtgcccttgcagtggtggcagcggaagcaggccttgtgg 779
|||||| ||||||||||| |||||||| | |||||| | |||||||
Sbjct: 236 cttgagtgtgcccttgcaatggtggcatctgaagcaagacttgtgg 191
>gb|BQ124994.1|BQ124994 EST610570 GLSD Medicago truncatula cDNA clone pGLSD-37H8, mRNA
sequence
Length = 532
Score = 44.1 bits (22), Expect = 0.021
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 734 cttgagggtgcccttgcagtggtggcagcggaagcaggccttgtgg 779
|||||| ||||||||||| |||||||| | |||||| | |||||||
Sbjct: 237 cttgagtgtgcccttgcaatggtggcatctgaagcaagacttgtgg 192
>gb|AC174278.7| Medicago truncatula clone mth2-9d14, WORKING DRAFT SEQUENCE, 24
unordered pieces
Length = 113275
Score = 44.1 bits (22), Expect = 0.021
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 734 cttgagggtgcccttgcagtggtggcagcggaagcaggccttgtgg 779
|||||| ||||||||||| |||||||| | |||||| | |||||||
Sbjct: 40752 cttgagtgtgcccttgcaatggtggcatctgaagcaagacttgtgg 40707
>gb|AC149807.10| Medicago truncatula clone mth2-151h1, WORKING DRAFT SEQUENCE, 11
unordered pieces
Length = 132946
Score = 42.1 bits (21), Expect = 0.084
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 atccaaatatcatcttaaacaaaag 25
||||||||||||||||||| |||||
Sbjct: 108612 atccaaatatcatcttaaaaaaaag 108636
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 198,550
Number of Sequences: 392609
Number of extensions: 198550
Number of successful extensions: 14754
Number of sequences better than 0.5: 22
Number of HSP's better than 0.5 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14678
Number of HSP's gapped (non-prelim): 64
length of query: 950
length of database: 441,732,993
effective HSP length: 20
effective length of query: 930
effective length of database: 433,880,813
effective search space: 403509156090
effective search space used: 403509156090
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)