BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804972.2.1
(1311 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW690208.1|AW690208 NF030B03ST1F1000 Developing stem Med... 46 0.007
gb|AW207966.2|AW207966 M111197e GVN Medicago truncatula cDN... 46 0.007
gb|BF641457.1|BF641457 NF056H06IN1F1059 Insect herbivory Me... 46 0.007
gb|BF642565.1|BF642565 NF060H05IN1F1046 Insect herbivory Me... 46 0.007
gb|BF649177.1|BF649177 NF054H06EC1F1058 Elicited cell cultu... 46 0.007
gb|BF649457.1|BF649457 NF064E11EC1F1085 Elicited cell cultu... 46 0.007
gb|BF651179.1|BF651179 NF102C11EC1F1084 Elicited cell cultu... 46 0.007
gb|AW694444.2|AW694444 NF076E01ST1F1005 Developing stem Med... 46 0.007
gb|BG457169.1|BG457169 NF100F04PL1F1041 Phosphate starved l... 46 0.007
gb|BG645219.1|BG645219 EST506838 KV3 Medicago truncatula cD... 46 0.007
gb|AJ503266.1|AJ503266 AJ503266 MTAMP Medicago truncatula c... 46 0.007
gb|AJ504141.1|AJ504141 AJ504141 MTAMP Medicago truncatula c... 46 0.007
gb|AJ498407.1|AJ498407 AJ498407 MTPOSE Medicago truncatula ... 46 0.007
gb|AJ499064.1|AJ499064 AJ499064 MTPOSE Medicago truncatula ... 46 0.007
gb|CB891591.1|CB891591 EST648560 KV3 Medicago truncatula cD... 46 0.007
gb|DW016317.1|DW016317 EST1225278 MTY Medicago truncatula c... 46 0.007
gb|DW017377.1|DW017377 EST1226338 MTY Medicago truncatula c... 46 0.007
gb|AC125481.23| Medicago truncatula clone mth2-15n13, compl... 46 0.007
gb|AC149130.2| Medicago truncatula chromosome 2 BAC clone m... 42 0.12
gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone m... 42 0.12
gb|AC152496.13| Medicago truncatula clone mth2-15e22, WORKI... 42 0.12
gb|AW685382.1|AW685382 NF028B06NR1F1000 Nodulated root Medi... 40 0.46
gb|AW689661.1|AW689661 NF022H10ST1F1000 Developing stem Med... 40 0.46
gb|BF632511.1|BF632511 NF027C11DT1F1083 Drought Medicago tr... 40 0.46
gb|BF633213.1|BF633213 NF052C11DT1F1086 Drought Medicago tr... 40 0.46
gb|BF635045.1|BF635045 NF078H04DT1F1043 Drought Medicago tr... 40 0.46
gb|BF635479.1|BF635479 NF070D07DT1F1061 Drought Medicago tr... 40 0.46
gb|BF637627.1|BF637627 NF032H10PL1F1090 Phosphate starved l... 40 0.46
gb|BF639494.1|BF639494 NF013D04IN1F1042 Insect herbivory Me... 40 0.46
gb|BF639747.1|BF639747 NF018A09IN1F1069 Insect herbivory Me... 40 0.46
gb|BE318575.2|BE318575 NF041D05LF1F1043 Developing leaf Med... 40 0.46
gb|BE248076.2|BE248076 NF003D02DT1F1014 Drought Medicago tr... 40 0.46
gb|BE247881.2|BE247881 NF023A12DT1F1086 Drought Medicago tr... 40 0.46
gb|BE323440.2|BE323440 NF008A04PL1F1021 Phosphate starved l... 40 0.46
gb|BG452563.1|BG452563 NF107D02LF1F1014 Developing leaf Med... 40 0.46
gb|BG453124.1|BG453124 NF092F02LF1F1016 Developing leaf Med... 40 0.46
gb|BG453165.1|BG453165 NF086G12LF1F1097 Developing leaf Med... 40 0.46
gb|BG456785.1|BG456785 NF098B07PL1F1059 Phosphate starved l... 40 0.46
gb|BG457113.1|BG457113 NF095C07PL1F1052 Phosphate starved l... 40 0.46
gb|BQ149182.1|BQ149182 NF088D03FL1F1029 Developing flower M... 40 0.46
gb|BQ149184.1|BQ149184 NF088D03FL1F1030 Developing flower M... 40 0.46
gb|DW015414.1|DW015414 EST1224375 MTY Medicago truncatula c... 40 0.46
gb|AC135103.17| Medicago truncatula clone mth2-11l2, comple... 40 0.46
>gb|AW690208.1|AW690208 NF030B03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF030B03ST 5', mRNA sequence
Length = 673
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 279 tttcacactgcatctcccttttatcatgatgtcaaggat 317
>gb|AW207966.2|AW207966 M111197e GVN Medicago truncatula cDNA clone N173, mRNA sequence
Length = 381
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 260 tttcacactgcatctcccttttatcatgatgtcaaggat 298
>gb|BF641457.1|BF641457 NF056H06IN1F1059 Insect herbivory Medicago truncatula cDNA clone
NF056H06IN 5', mRNA sequence
Length = 598
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 333 tttcacactgcatctcccttttatcatgatgtcaaggat 371
>gb|BF642565.1|BF642565 NF060H05IN1F1046 Insect herbivory Medicago truncatula cDNA clone
NF060H05IN 5', mRNA sequence
Length = 524
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 262 tttcacactgcatctcccttttatcatgatgtcaaggat 300
>gb|BF649177.1|BF649177 NF054H06EC1F1058 Elicited cell culture Medicago truncatula cDNA
clone NF054H06EC 5', mRNA sequence
Length = 670
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 225 tttcacactgcatctcccttttatcatgatgtcaaggat 263
>gb|BF649457.1|BF649457 NF064E11EC1F1085 Elicited cell culture Medicago truncatula cDNA
clone NF064E11EC 5', mRNA sequence
Length = 663
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 256 tttcacactgcatctcccttttatcatgatgtcaaggat 294
>gb|BF651179.1|BF651179 NF102C11EC1F1084 Elicited cell culture Medicago truncatula cDNA
clone NF102C11EC 5', mRNA sequence
Length = 676
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 263 tttcacactgcatctcccttttatcatgatgtcaaggat 301
>gb|AW694444.2|AW694444 NF076E01ST1F1005 Developing stem Medicago truncatula cDNA clone
NF076E01ST 5', mRNA sequence
Length = 499
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 256 tttcacactgcatctcccttttatcatgatgtcaaggat 294
>gb|BG457169.1|BG457169 NF100F04PL1F1041 Phosphate starved leaf Medicago truncatula cDNA
clone NF100F04PL 5', mRNA sequence
Length = 647
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 270 tttcacactgcatctcccttttatcatgatgtcaaggat 308
>gb|BG645219.1|BG645219 EST506838 KV3 Medicago truncatula cDNA clone pKV3-39H13 5' end,
mRNA sequence
Length = 777
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 264 tttcacactgcatctcccttttatcatgatgtcaaggat 302
>gb|AJ503266.1|AJ503266 AJ503266 MTAMP Medicago truncatula cDNA clone mtgmadc120032b01,
mRNA sequence
Length = 552
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 263 tttcacactgcatctcccttttatcatgatgtcaaggat 301
>gb|AJ504141.1|AJ504141 AJ504141 MTAMP Medicago truncatula cDNA clone mtgmadc120043d12,
mRNA sequence
Length = 531
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 272 tttcacactgcatctcccttttatcatgatgtcaaggat 310
>gb|AJ498407.1|AJ498407 AJ498407 MTPOSE Medicago truncatula cDNA clone mt--acc955204e01,
mRNA sequence
Length = 479
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 301 tttcacactgcatctcccttttatcatgatgtcaaggat 339
>gb|AJ499064.1|AJ499064 AJ499064 MTPOSE Medicago truncatula cDNA clone mt--acc955211g04,
mRNA sequence
Length = 503
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 287 tttcacactgcatctcccttttatcatgatgtcaaggat 325
>gb|CB891591.1|CB891591 EST648560 KV3 Medicago truncatula cDNA clone KV3-51A23, mRNA
sequence
Length = 749
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 221 tttcacactgcatctcccttttatcatgatgtcaaggat 259
>gb|DW016317.1|DW016317 EST1225278 MTY Medicago truncatula cDNA clone MTYAF70, mRNA
sequence
Length = 749
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 263 tttcacactgcatctcccttttatcatgatgtcaaggat 301
>gb|DW017377.1|DW017377 EST1226338 MTY Medicago truncatula cDNA clone MTYAS86, mRNA
sequence
Length = 361
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 78 tttcacactgcatctcccttttatcatgatgtcaaggat 116
>gb|AC125481.23| Medicago truncatula clone mth2-15n13, complete sequence
Length = 121953
Score = 46.1 bits (23), Expect = 0.007
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||||| |||||||||||
Sbjct: 40553 tttcacactgcatctcccttttatcatgatgtcaaggat 40515
>gb|AC149130.2| Medicago truncatula chromosome 2 BAC clone mth2-193n2, complete sequence
Length = 132313
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 467 aaaggtggttgtaacatcatctatg 491
||||||||| |||||||||||||||
Sbjct: 101828 aaaggtggtggtaacatcatctatg 101804
>gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-145o9, complete sequence
Length = 107765
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 467 aaaggtggttgtaacatcatctatg 491
||||||||| |||||||||||||||
Sbjct: 104493 aaaggtggtggtaacatcatctatg 104517
>gb|AC152496.13| Medicago truncatula clone mth2-15e22, WORKING DRAFT SEQUENCE
Length = 115944
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 467 aaaggtggttgtaacatcatctatg 491
||||||||| |||||||||||||||
Sbjct: 89966 aaaggtggtggtaacatcatctatg 89990
>gb|AW685382.1|AW685382 NF028B06NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF028B06NR 5', mRNA sequence
Length = 599
Score = 40.1 bits (20), Expect = 0.46
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 351 tttcatactgcctctcccttttatcacaatgtcaaggat 389
||||| ||||| |||||||||||| | |||||||||||
Sbjct: 327 tttcacactgcatctcccttttatnatgatgtcaaggat 365
>gb|AW689661.1|AW689661 NF022H10ST1F1000 Developing stem Medicago truncatula cDNA clone
NF022H10ST 5', mRNA sequence
Length = 687
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 89 ctcctcctcgaacgaggctacaccgtcc 116
>gb|BF632511.1|BF632511 NF027C11DT1F1083 Drought Medicago truncatula cDNA clone NF027C11DT
5', mRNA sequence
Length = 585
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|BF633213.1|BF633213 NF052C11DT1F1086 Drought Medicago truncatula cDNA clone NF052C11DT
5', mRNA sequence
Length = 413
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|BF635045.1|BF635045 NF078H04DT1F1043 Drought Medicago truncatula cDNA clone NF078H04DT
5', mRNA sequence
Length = 668
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 88 ctcctcctcgaacgaggctacaccgtcc 115
>gb|BF635479.1|BF635479 NF070D07DT1F1061 Drought Medicago truncatula cDNA clone NF070D07DT
5', mRNA sequence
Length = 675
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 64 ctcctcctcgaacgaggctacaccgtcc 91
>gb|BF637627.1|BF637627 NF032H10PL1F1090 Phosphate starved leaf Medicago truncatula cDNA
clone NF032H10PL 5', mRNA sequence
Length = 660
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 77 ctcctcctcgaacgaggctacaccgtcc 104
>gb|BF639494.1|BF639494 NF013D04IN1F1042 Insect herbivory Medicago truncatula cDNA clone
NF013D04IN 5', mRNA sequence
Length = 383
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|BF639747.1|BF639747 NF018A09IN1F1069 Insect herbivory Medicago truncatula cDNA clone
NF018A09IN 5', mRNA sequence
Length = 141
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 84 ctcctcctcgaacgaggctacaccgtcc 111
>gb|BE318575.2|BE318575 NF041D05LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF041D05LF 5', mRNA sequence
Length = 379
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|BE248076.2|BE248076 NF003D02DT1F1014 Drought Medicago truncatula cDNA clone NF003D02DT
5', mRNA sequence
Length = 320
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|BE247881.2|BE247881 NF023A12DT1F1086 Drought Medicago truncatula cDNA clone NF023A12DT
5', mRNA sequence
Length = 573
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 91 ctcctcctcgaacgaggctacaccgtcc 118
>gb|BE323440.2|BE323440 NF008A04PL1F1021 Phosphate starved leaf Medicago truncatula cDNA
clone NF008A04PL 5', mRNA sequence
Length = 277
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 88 ctcctcctcgaacgaggctacaccgtcc 115
>gb|BG452563.1|BG452563 NF107D02LF1F1014 Developing leaf Medicago truncatula cDNA clone
NF107D02LF 5', mRNA sequence
Length = 663
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 91 ctcctcctcgaacgaggctacaccgtcc 118
>gb|BG453124.1|BG453124 NF092F02LF1F1016 Developing leaf Medicago truncatula cDNA clone
NF092F02LF 5', mRNA sequence
Length = 656
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 86 ctcctcctcgaacgaggctacaccgtcc 113
>gb|BG453165.1|BG453165 NF086G12LF1F1097 Developing leaf Medicago truncatula cDNA clone
NF086G12LF 5', mRNA sequence
Length = 671
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 92 ctcctcctcgaacgaggctacaccgtcc 119
>gb|BG456785.1|BG456785 NF098B07PL1F1059 Phosphate starved leaf Medicago truncatula cDNA
clone NF098B07PL 5', mRNA sequence
Length = 645
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 58 ctcctcctcgaacgaggctacaccgtcc 85
>gb|BG457113.1|BG457113 NF095C07PL1F1052 Phosphate starved leaf Medicago truncatula cDNA
clone NF095C07PL 5', mRNA sequence
Length = 658
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 92 ctcctcctcgaacgaggctacaccgtcc 119
>gb|BQ149182.1|BQ149182 NF088D03FL1F1029 Developing flower Medicago truncatula cDNA clone
NF088D03FL 5', mRNA sequence
Length = 503
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|BQ149184.1|BQ149184 NF088D03FL1F1030 Developing flower Medicago truncatula cDNA clone
NF088D03FL 5', mRNA sequence
Length = 560
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 85 ctcctcctcgaacgaggctacaccgtcc 112
>gb|DW015414.1|DW015414 EST1224375 MTY Medicago truncatula cDNA clone MTYA478, mRNA
sequence
Length = 854
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtcc 204
||||||||||| || |||||||||||||
Sbjct: 116 ctcctcctcgaacgaggctacaccgtcc 143
>gb|AC135103.17| Medicago truncatula clone mth2-11l2, complete sequence
Length = 99399
Score = 40.1 bits (20), Expect = 0.46
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 876 cactactcagaactggtgaa 895
||||||||||||||||||||
Sbjct: 78733 cactactcagaactggtgaa 78714
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 281,561
Number of Sequences: 392609
Number of extensions: 281561
Number of successful extensions: 19578
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19480
Number of HSP's gapped (non-prelim): 98
length of query: 1311
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1291
effective length of database: 433,880,813
effective search space: 560140129583
effective search space used: 560140129583
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)