BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716365.2.1
(936 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ165763.1|BQ165763 EST611632 KVKC Medicago truncatula c... 141 1e-031
gb|CA858134.1|CA858134 EST635389 GLSD Medicago truncatula c... 117 2e-024
gb|CX533662.1|CX533662 s13dNF0KC03MJ018_320475 Methyl Jasmo... 101 1e-019
gb|CX534322.1|CX534322 s13dNF0KC03MJ018_322401 Methyl Jasmo... 88 2e-015
gb|BE318401.2|BE318401 NF037H02LF1F1025 Developing leaf Med... 68 1e-009
gb|BE202836.1|BE202836 EST402858 KV1 Medicago truncatula cD... 62 9e-008
gb|AL372911.1|AL372911 MtBA54D11R1 MtBA Medicago truncatula... 62 9e-008
gb|BG453827.1|BG453827 NF095C03LF1F1019 Developing leaf Med... 62 9e-008
gb|BI272382.1|BI272382 NF023C12FL1F1097 Developing flower M... 62 9e-008
gb|CA922543.1|CA922543 EST640261 MTUS Medicago truncatula c... 62 9e-008
gb|CX519351.1|CX519351 s13dNF45G11VI088_442754 Virus-Infect... 62 9e-008
gb|AC141866.11| Medicago truncatula clone mth2-12p22, compl... 62 9e-008
gb|AC132565.28| Medicago truncatula clone mth2-4a8, complet... 62 9e-008
gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone m... 56 6e-006
gb|AC170988.4| Medicago truncatula chromosome 7 clone mth2-... 56 6e-006
gb|CX523150.1|CX523150 s13dNF80C08VI066_472104 Virus-Infect... 54 2e-005
gb|CX520726.1|CX520726 s13dNF62C10VI072_449238 Virus-Infect... 50 3e-004
gb|CG938983.1|CG938983 MBELR34TR mth2 Medicago truncatula g... 48 0.001
gb|BI308545.1|BI308545 EST529955 GPOD Medicago truncatula c... 48 0.001
gb|BQ122173.1|BQ122173 EST607749 GLSD Medicago truncatula c... 48 0.001
gb|BI272105.1|BI272105 NF020G11FL1F1087 Developing flower M... 46 0.005
gb|AC144723.5| Medicago truncatula clone mth2-7h1, WORKING ... 46 0.005
emb|CR501666.1| mth2-144D9RM1 BAC end, cultivar Jemalong A1... 40 0.33
emb|CR964831.1| mth4-9J8RM1 BAC end, cultivar Jemalong A17 ... 40 0.33
gb|CA919503.1|CA919503 EST637221 MTUS Medicago truncatula c... 40 0.33
gb|AC152067.21| Medicago truncatula clone mth2-22g24, compl... 40 0.33
>gb|BQ165763.1|BQ165763 EST611632 KVKC Medicago truncatula cDNA clone pKVKC-11E5, mRNA
sequence
Length = 668
Score = 141 bits (71), Expect = 1e-031
Identities = 290/363 (79%)
Strand = Plus / Plus
Query: 404 aaagaacgggtgctgttttatttctgtggctccacgcttatacgctaatcgatgctgagg 463
|||||| || || |||||||| ||||||||||| || | ||||| | |||||||||||
Sbjct: 296 aaagaatggatgttgttttatctctgtggctccgcgtctgtacgcaagacgatgctgagg 355
Query: 464 ttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactacaggtgattc 523
||| || | || || |||||||| | ||||| |||||||| || || ||| |||||
Sbjct: 356 ttctttcacaagtaaacccctaatcaagtccctggcagcaaagctaacactaggggattc 415
Query: 524 tgggaaccttaagggttgtccaactacgttgaacaatgtcgccctattcccagaaccttt 583
||| || |||||||| || || ||||| || || || || |||| |||| | ||||||||
Sbjct: 416 tggaaatcttaagggctgcccgactacattaaataaagttgcccgattcgccgaaccttt 475
Query: 584 gaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccagtctac 643
|||||| || | || || | |||||| || |||||||| ||||||||||||||||||||
Sbjct: 476 gaatggagttctaccaaacaaaagctcgtataagaatataccaaatgtccaccagtctac 535
Query: 644 agcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtgccaac 703
|||||| || || || ||||| || || |||||||| ||||||||||| || ||||||||
Sbjct: 536 agcactgccgtgaccttcgcctttgatgatttcaggcgccaagtactcgtgcgtgccaac 595
Query: 704 aaaagacatagaccttgcatctgtcggctctgcaacaagctcaggaagtggtctgacctg 763
||| ||||| || | |||| ||| ||||| || | ||||||||| |||||| | |||||
Sbjct: 596 aaaggacattgatcgggcatttgtgggctccgccataagctcagggagtggtgtcacctg 655
Query: 764 att 766
|||
Sbjct: 656 att 658
>gb|CA858134.1|CA858134 EST635389 GLSD Medicago truncatula cDNA clone pGLSD-27I3, mRNA
sequence
Length = 500
Score = 117 bits (59), Expect = 2e-024
Identities = 287/363 (79%)
Strand = Plus / Minus
Query: 404 aaagaacgggtgctgttttatttctgtggctccacgcttatacgctaatcgatgctgagg 463
|||||| || || |||||||| ||||||||||| || | ||||| | |||||||||||
Sbjct: 422 aaagaatggatgttgttttatctctgtggctccgcgtctgtacgcaagacgatgctgagg 363
Query: 464 ttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactacaggtgattc 523
||| || | || |||||| |||| | ||||| |||||||| || || ||| ||||
Sbjct: 362 ttctttcacaagtaatcccataatcaagtccctggcagcaaagctaacactaggggattt 303
Query: 524 tgggaaccttaagggttgtccaactacgttgaacaatgtcgccctattcccagaaccttt 583
||| || |||||||| || || ||||| || || || || ||| |||| | ||||||||
Sbjct: 302 tggaaatcttaagggctgcccgactacattaaataaagttgcctgattcgccgaaccttt 243
Query: 584 gaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccagtctac 643
|||||| || | || || | |||||| || |||||||| ||||||||||||||||||||
Sbjct: 242 gaatggagttgtaccaaacaaaagctcgtataagaatataccaaatgtccaccagtctac 183
Query: 644 agcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtgccaac 703
|||||| || || | ||||| || || |||||||| ||||||||||| || ||||||||
Sbjct: 182 agcactgccgtgacattcgcctttgatgatttcaggcgccaagtactcgtgcgtgccaac 123
Query: 704 aaaagacatagaccttgcatctgtcggctctgcaacaagctcaggaagtggtctgacctg 763
||| ||||| || | |||| ||| ||||| || | ||||||||| |||||| | |||||
Sbjct: 122 aaaggacattgatcgggcatttgtgggctccgccataagctcagggagtggtgtcacctg 63
Query: 764 att 766
|||
Sbjct: 62 att 60
>gb|CX533662.1|CX533662 s13dNF0KC03MJ018_320475 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 667
Score = 101 bits (51), Expect = 1e-019
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
|||||||||||||||||||||||||| || || || ||||| || || |||||||| |||
Sbjct: 663 ccaaatgtccaccagtctacagcactgccgtgaccttcgcctttgatgatttcaggcgcc 604
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
|||||||| || ||||||||||| ||||| || | |||| ||| ||||| || | ||||
Sbjct: 603 aagtactcgtgcgtgccaacaaaggacattgatcgggcatttgtgggctccgccataagc 544
Query: 744 tcaggaagtggtctgacctgatt 766
||||| |||||| | ||||||||
Sbjct: 543 tcagggagtggtgtcacctgatt 521
>gb|CX534322.1|CX534322 s13dNF0KC03MJ018_322401 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 656
Score = 87.7 bits (44), Expect = 2e-015
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 631 tccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaagtact 690
||||||||||||||||||| || || || ||||| || || |||||||| ||||||||||
Sbjct: 656 tccaccagtctacagcactgccgtgaccttcgcctttgatgatttcaggcgccaagtact 597
Query: 691 catgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagctcaggaa 750
| || ||||||||||| ||||| || | |||| ||| ||||| || | ||||||||| |
Sbjct: 596 cgtgcgtgccaacaaaggacattgatcgggcatttgtgggctccgccataagctcaggga 537
Query: 751 gtggtctgacctgatt 766
||||| | ||||||||
Sbjct: 536 gtggtgtcacctgatt 521
>gb|BE318401.2|BE318401 NF037H02LF1F1025 Developing leaf Medicago truncatula cDNA clone
NF037H02LF 5', mRNA sequence
Length = 485
Score = 67.9 bits (34), Expect = 1e-009
Identities = 125/153 (81%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 617 gaatatgccaaatgtccaccagtc-tacagcac--ttccatgcccctcgccctttataat 673
|||||| ||||||||||||||||| ||||||| | || || || ||||| || || ||
Sbjct: 485 gaatataccaaatgtccaccagtcctacagcaacatgccgtgaccttcgcctttgatgat 426
Query: 674 ttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctc 733
|||||| ||||||||||| || ||||||||||| ||||| || | |||| ||| |||||
Sbjct: 425 ttcaggcgccaagtactcgtgcgtgccaacaaaggacattgatcgggcatttgtgggctc 366
Query: 734 tgcaacaagctcaggaagtggtctgacctgatt 766
|| | ||||||||| |||||| | ||||||||
Sbjct: 365 cgccataagctcagggagtggtgtcacctgatt 333
>gb|BE202836.1|BE202836 EST402858 KV1 Medicago truncatula cDNA clone pKV1-3M24, mRNA
sequence
Length = 540
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 405 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 464
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 465 ggtgcttctgg 475
>gb|AL372911.1|AL372911 MtBA54D11R1 MtBA Medicago truncatula cDNA clone MtBA54D11 T7, mRNA
sequence
Length = 534
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 71 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 12
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 11 ggtgcttctgg 1
>gb|BG453827.1|BG453827 NF095C03LF1F1019 Developing leaf Medicago truncatula cDNA clone
NF095C03LF 5', mRNA sequence
Length = 561
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 178 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 119
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 118 ggtgcttctgg 108
>gb|BI272382.1|BI272382 NF023C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF023C12FL 5', mRNA sequence
Length = 652
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 399 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 340
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 339 ggtgcttctgg 329
>gb|CA922543.1|CA922543 EST640261 MTUS Medicago truncatula cDNA clone MTUS-55A10, mRNA
sequence
Length = 751
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 366 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 425
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 426 ggtgcttctgg 436
>gb|CX519351.1|CX519351 s13dNF45G11VI088_442754 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 602
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 548 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 489
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 488 ggtgcttctgg 478
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
Length = 126907
Score = 61.9 bits (31), Expect = 9e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 456 tgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactaca 515
|||||||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||
Sbjct: 34450 tgctgaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaaca 34509
Query: 516 ggtgattctgg 526
|||| ||||||
Sbjct: 34510 ggtgcttctgg 34520
>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence
Length = 134155
Score = 61.9 bits (31), Expect = 9e-008
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
|||||||| || |||||||| || || ||||||||||||||||| ||||| | |||||
Sbjct: 34622 gcccaattcactccttcaaaaaatggatgctgttttatttctgttgctcctcttttatat 34681
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatc 493
|| | || | |||||||||||| || | |||||| |||||||||||
Sbjct: 34682 gcaattctcttctgaggttccttaatcaacaatcctctaataagatc 34728
Score = 48.1 bits (24), Expect = 0.001
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
|||||||||||||| || || |||||||| ||||| ||||| || || || || || ||
Sbjct: 34844 tcatacaagaatattccgaaagtccaccaatctaccgcactaccgtgtccttctcctttg 34903
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| ||||||||||| | ||||| || ||||| ||||| |||||
Sbjct: 34904 atgatttcaggtgcgagatactcgtgtgtgcctacaaatgacat 34947
>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence
Length = 125195
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||||||||||||||| || ||| ||||| ||||| | || || || ||||| |||
Sbjct: 120627 ccaaatgtccaccagtcaactgcagcaccatgtccctcttctttgatgatctcaggcgcc 120568
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||| ||||| || |||||||| || | ||||||||||| || ||||| || ||||||
Sbjct: 120567 aagtattcatgtgtaccaacaaatgagtttgaccttgcatcagtgggctcagccacaagc 120508
Query: 744 tcaggaagtggtctga 759
| ||||||| |||||
Sbjct: 120507 tgcggaagtgatctga 120492
>gb|AC170988.4| Medicago truncatula chromosome 7 clone mth2-53m12, *** SEQUENCING IN
PROGRESS ***
Length = 122501
Score = 56.0 bits (28), Expect = 6e-006
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||||||||||||||| || ||| ||||| ||||| | || || || ||||| |||
Sbjct: 16922 ccaaatgtccaccagtcaactgcagcaccatgtccctcttctttgatgatctcaggcgcc 16863
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||| ||||| || |||||||| || | ||||||||||| || ||||| || ||||||
Sbjct: 16862 aagtattcatgtgtaccaacaaatgagtttgaccttgcatcagtgggctcagccacaagc 16803
Query: 744 tcaggaagtggtctga 759
| ||||||| |||||
Sbjct: 16802 tgcggaagtgatctga 16787
>gb|CX523150.1|CX523150 s13dNF80C08VI066_472104 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 544
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 460 gaggttccttgatgagcaatcccctaataagatcccttgcagcaaaactcactacaggtg 519
|||||||||| | ||||| ||||| |||||||||||||| ||||| || || |||||||
Sbjct: 544 gaggttcctttacaagcaaacccctgataagatcccttgctgcaaagctaacaacaggtg 485
Query: 520 attctgg 526
||||||
Sbjct: 484 cttctgg 478
>gb|CX520726.1|CX520726 s13dNF62C10VI072_449238 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 567
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 474 agcaatcccctaataagatcccttgcagcaaaactcactacaggtgattctgg 526
||||| ||||| |||||||||||||| ||||| || || ||||||| ||||||
Sbjct: 530 agcaaacccctgataagatcccttgctgcaaagctaacaacaggtgcttctgg 478
>gb|CG938983.1|CG938983 MBELR34TR mth2 Medicago truncatula genomic clone 82E20, DNA
sequence
Length = 448
Score = 48.1 bits (24), Expect = 0.001
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
|||||||||||||| || || |||||||| ||||| ||||| || || || || || ||
Sbjct: 219 tcatacaagaatattccgaaagtccaccaatctaccgcactaccgtgtccttctcctttg 160
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| ||||||||||| | ||||| || ||||| ||||| |||||
Sbjct: 159 atgatttcaggtgcgagatactcgtgtgtgcctacaaatgacat 116
>gb|BI308545.1|BI308545 EST529955 GPOD Medicago truncatula cDNA clone pGPOD-7M21 5' end,
mRNA sequence
Length = 766
Score = 48.1 bits (24), Expect = 0.001
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 614 caagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttataat 673
|||||| || || ||||||||||| || || ||||||||||| || || || || |||||
Sbjct: 395 caagaaaattccgaatgtccaccaatcaactgcacttccatgaccttctcctttgataat 336
Query: 674 ttcaggtgccaagtactcatgggtgccaacaaaagacatagacc 717
|||||| || | |||||||| || ||||| || ||||| ||||
Sbjct: 335 ttcaggggcgagatactcatgagtaccaacgaaggacattgacc 292
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttt 421
||||| || |||||||||||||| |||||||||||
Sbjct: 622 gcccagttcacaccttcaaagaaagggtgctgttt 588
>gb|BQ122173.1|BQ122173 EST607749 GLSD Medicago truncatula cDNA clone pGLSD-28M11, mRNA
sequence
Length = 724
Score = 48.1 bits (24), Expect = 0.001
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 614 caagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttataat 673
|||||| || || ||||||||||| || || ||||||||||| || || || || |||||
Sbjct: 496 caagaaaattccgaatgtccaccaatcaactgcacttccatgaccttctcctttgataat 437
Query: 674 ttcaggtgccaagtactcatgggtgccaacaaaagacatagacc 717
|||||| || | |||||||| || ||||| || ||||| ||||
Sbjct: 436 ttcaggggcgagatactcatgagtaccaacgaaggacattgacc 393
>gb|BI272105.1|BI272105 NF020G11FL1F1087 Developing flower Medicago truncatula cDNA clone
NF020G11FL 5', mRNA sequence
Length = 645
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 399 ccttcaaagaacgggtgctgttttatttctg 429
||||||||||| || ||||||||||||||||
Sbjct: 480 ccttcaaagaagggatgctgttttatttctg 450
>gb|AC144723.5| Medicago truncatula clone mth2-7h1, WORKING DRAFT SEQUENCE, 18
unordered pieces
Length = 64100
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 399 ccttcaaagaacgggtgctgttttatttctg 429
||||||||||| || ||||||||||||||||
Sbjct: 51300 ccttcaaagaagggatgctgttttatttctg 51270
>emb|CR501666.1| mth2-144D9RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 594
Score = 40.1 bits (20), Expect = 0.33
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 779 ctttgcctttttatcttttt 798
||||||||||||||||||||
Sbjct: 32 ctttgcctttttatcttttt 51
>emb|CR964831.1| mth4-9J8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 555
Score = 40.1 bits (20), Expect = 0.33
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 779 ctttgcctttttatcttttttctc 802
||||| ||||||||||||||||||
Sbjct: 262 ctttgtctttttatcttttttctc 239
>gb|CA919503.1|CA919503 EST637221 MTUS Medicago truncatula cDNA clone MTUS-14E5, mRNA
sequence
Length = 646
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 624 ccaaatgtccaccagtctacagcacttccatg 655
|||||||||||||| || || |||||||||||
Sbjct: 599 ccaaatgtccaccaatccactgcacttccatg 630
>gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete sequence
Length = 86972
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 624 ccaaatgtccaccagtctacagcacttccatg 655
|||||||||||||| || || |||||||||||
Sbjct: 21370 ccaaatgtccaccaatccactgcacttccatg 21339
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 232,136
Number of Sequences: 392609
Number of extensions: 232136
Number of successful extensions: 17431
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17374
Number of HSP's gapped (non-prelim): 48
length of query: 936
length of database: 441,732,993
effective HSP length: 20
effective length of query: 916
effective length of database: 433,880,813
effective search space: 397434824708
effective search space used: 397434824708
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)