BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131543.2.5
(545 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW329629.1|AW329629 N200889e rootphos(-) Medicago trunca... 101 6e-020
gb|AL377900.1|AL377900 MtBB34F10F1 MtBB Medicago truncatula... 101 6e-020
gb|AL377901.1|AL377901 MtBB34F10R1 MtBB Medicago truncatula... 101 6e-020
gb|AL381163.1|AL381163 MtBB57C08F1 MtBB Medicago truncatula... 101 6e-020
gb|AL381164.1|AL381164 MtBB57C08R1 MtBB Medicago truncatula... 101 6e-020
gb|AL388578.1|AL388578 MtBC49E02F1 MtBC Medicago truncatula... 101 6e-020
gb|BG457047.1|BG457047 NF069A08PL1F1055 Phosphate starved l... 101 6e-020
gb|BI264033.1|BI264033 NF113F02PL1F1027 Phosphate starved l... 101 6e-020
gb|BI264320.1|BI264320 NF118G02PL1F1020 Phosphate starved l... 101 6e-020
gb|BQ150120.1|BQ150120 NF008E07LF1F1054 Developing leaf Med... 101 6e-020
gb|CX520493.1|CX520493 s13dNF55D10VI080_448772 Virus-Infect... 101 6e-020
gb|CX539905.1|CX539905 s13dNF0FE08GS055_463082 Germinating ... 101 6e-020
gb|DW017375.1|DW017375 EST1226336 MTY Medicago truncatula c... 101 6e-020
gb|AL377934.1|AL377934 MtBB34H08F1 MtBB Medicago truncatula... 98 9e-019
gb|AL377935.1|AL377935 MtBB34H08R1 MtBB Medicago truncatula... 98 9e-019
gb|BI268734.1|BI268734 NF024G10GS1F1083 Germinating Seed Me... 96 4e-018
gb|BQ149926.1|BQ149926 NF040A09LF1F1066 Developing leaf Med... 94 1e-017
gb|AJ498678.1|AJ498678 AJ498678 MTPOSE Medicago truncatula ... 94 1e-017
gb|CX536563.1|CX536563 s13dNF24G10GS083_456300 Germinating ... 94 1e-017
gb|BQ150662.1|BQ150662 NF041F03LF1F1028 Developing leaf Med... 88 9e-016
gb|BG646768.1|BG646768 EST508387 HOGA Medicago truncatula c... 86 4e-015
gb|BI311882.1|BI311882 EST5313632 GESD Medicago truncatula ... 86 4e-015
gb|AL388579.1|AL388579 MtBC49E02R1 MtBC Medicago truncatula... 84 1e-014
gb|BI272910.1|BI272910 NF098H01FL1F1015 Developing flower M... 84 1e-014
gb|AJ497870.1|AJ497870 AJ497870 MTFLOW Medicago truncatula ... 84 1e-014
gb|CF068747.1|CF068747 EST669468 MTUS Medicago truncatula c... 84 1e-014
gb|BF634623.1|BF634623 NF061H06DT1F1059 Drought Medicago tr... 78 9e-013
gb|AC126780.18| Medicago truncatula clone mth2-10n4, comple... 68 8e-010
gb|BI309783.1|BI309783 EST5311533 GESD Medicago truncatula ... 60 2e-007
>gb|AW329629.1|AW329629 N200889e rootphos(-) Medicago truncatula cDNA clone MHRP-22D2, mRNA
sequence
Length = 369
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 192 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 133
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 132 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 73
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 72 tggttgtgagcagtgtgattcttcgacttcgccat 38
>gb|AL377900.1|AL377900 MtBB34F10F1 MtBB Medicago truncatula cDNA clone MtBB34F10 T3, mRNA
sequence
Length = 409
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 191 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 132
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 131 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 72
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 71 tggttgtgagcagtgtgattcttcgacttcgccat 37
>gb|AL377901.1|AL377901 MtBB34F10R1 MtBB Medicago truncatula cDNA clone MtBB34F10 T7, mRNA
sequence
Length = 430
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 191 ttcttgttgggcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 132
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 131 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 72
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 71 tggttgtgagcagtgtgattcttcgacttcgccat 37
>gb|AL381163.1|AL381163 MtBB57C08F1 MtBB Medicago truncatula cDNA clone MtBB57C08 T3, mRNA
sequence
Length = 436
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 190 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 131
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 130 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 71
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 70 tggttgtgagcagtgtgattcttcgacttcgccat 36
>gb|AL381164.1|AL381164 MtBB57C08R1 MtBB Medicago truncatula cDNA clone MtBB57C08 T7, mRNA
sequence
Length = 458
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 190 ttcttgttgggcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 131
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 130 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 71
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 70 tggttgtgagcagtgtgattcttcgacttcgccat 36
>gb|AL388578.1|AL388578 MtBC49E02F1 MtBC Medicago truncatula cDNA clone MtBC49E02 T3, mRNA
sequence
Length = 367
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 192 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 133
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 132 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 73
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 72 tggttgtgagcagtgtgattcttcgacttcgccat 38
>gb|BG457047.1|BG457047 NF069A08PL1F1055 Phosphate starved leaf Medicago truncatula cDNA
clone NF069A08PL 5', mRNA sequence
Length = 441
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 199 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 140
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 139 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 80
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 79 tggttgtgagcagtgtgattcttcgacttcgccat 45
>gb|BI264033.1|BI264033 NF113F02PL1F1027 Phosphate starved leaf Medicago truncatula cDNA
clone NF113F02PL 5', mRNA sequence
Length = 438
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 193 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 134
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 133 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 74
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 73 tggttgtgagcagtgtgattcttcgacttcgccat 39
>gb|BI264320.1|BI264320 NF118G02PL1F1020 Phosphate starved leaf Medicago truncatula cDNA
clone NF118G02PL 5', mRNA sequence
Length = 424
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 199 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 140
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 139 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 80
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 79 tggttgtgagcagtgtgattcttcgacttcgccat 45
>gb|BQ150120.1|BQ150120 NF008E07LF1F1054 Developing leaf Medicago truncatula cDNA clone
NF008E07LF 5', mRNA sequence
Length = 801
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 303 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 244
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 243 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 184
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 183 tggttgtgagcagtgtgattcttcgacttcgccat 149
>gb|CX520493.1|CX520493 s13dNF55D10VI080_448772 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 421
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 194 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 135
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 134 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 75
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 74 tggttgtgagcagtgtgattcttcgacttcgccat 40
>gb|CX539905.1|CX539905 s13dNF0FE08GS055_463082 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 418
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 191 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 132
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 131 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 72
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 71 tggttgtgagcagtgtgattcttcgacttcgccat 37
>gb|DW017375.1|DW017375 EST1226336 MTY Medicago truncatula cDNA clone MTYAS84, mRNA
sequence
Length = 396
Score = 101 bits (51), Expect = 6e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 211 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 152
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 151 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 92
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 91 tggttgtgagcagtgtgattcttcgacttcgccat 57
>gb|AL377934.1|AL377934 MtBB34H08F1 MtBB Medicago truncatula cDNA clone MtBB34H08 T3, mRNA
sequence
Length = 308
Score = 97.6 bits (49), Expect = 9e-019
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 282 cttccttgagtacctcaagttcctcagaaacttcgggtccatccccttggtggaggtctg 341
|||||||| ||||||| |||||||| |||||| || |||||||| |||||||| || ||
Sbjct: 169 cttccttgcgtacctctggttcctcaaaaactttggatccatccctttggtggaagtgtg 110
Query: 342 gcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgattggttatgcgc 401
||| || | ||| |||||||||||||| || ||||| |||||| | || ||||| || ||
Sbjct: 109 gcgatgcctctttggcttcttgatgccatttttgtgggccttgtaagactggttgtgagc 50
Query: 402 cgtgtggttcttcgacttggccatc 426
||||| ||||||||||| ||||||
Sbjct: 49 ggtgtgattcttcgactttgccatc 25
>gb|AL377935.1|AL377935 MtBB34H08R1 MtBB Medicago truncatula cDNA clone MtBB34H08 T7, mRNA
sequence
Length = 343
Score = 97.6 bits (49), Expect = 9e-019
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 282 cttccttgagtacctcaagttcctcagaaacttcgggtccatccccttggtggaggtctg 341
|||||||| ||||||| |||||||| |||||| || |||||||| |||||||| || ||
Sbjct: 173 cttccttgcgtacctctggttcctcaaaaactttggatccatccctttggtggaagtgtg 114
Query: 342 gcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgattggttatgcgc 401
||| || | ||| |||||||||||||| || ||||| |||||| | || ||||| || ||
Sbjct: 113 gcgatgcctctttggcttcttgatgccatttttgtgggccttgtaagactggttgtgagc 54
Query: 402 cgtgtggttcttcgacttggccatc 426
||||| ||||||||||| ||||||
Sbjct: 53 ggtgtgattcttcgactttgccatc 29
>gb|BI268734.1|BI268734 NF024G10GS1F1083 Germinating Seed Medicago truncatula cDNA clone
NF024G10GS 5', mRNA sequence
Length = 435
Score = 95.6 bits (48), Expect = 4e-018
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 174 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 115
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| | | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 114 gtggaagtgtggcgangcctctttggctttttgatgccattcttgtgagccttgtaagac 55
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 54 tggttgtgagcagtgtgattcttcgacttcgccat 20
>gb|BQ149926.1|BQ149926 NF040A09LF1F1066 Developing leaf Medicago truncatula cDNA clone
NF040A09LF 5', mRNA sequence
Length = 873
Score = 93.7 bits (47), Expect = 1e-017
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 304 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 245
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||| | || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 244 gtggaagtgtggagatgcctctttggctttttgatgccattcttgtgagccttgtaagac 185
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 184 tggttgtgagcagtgtgattcttcgacttcgccat 150
>gb|AJ498678.1|AJ498678 AJ498678 MTPOSE Medicago truncatula cDNA clone mt--acc955207d11,
mRNA sequence
Length = 436
Score = 93.7 bits (47), Expect = 1e-017
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 214 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 155
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||| ||| |||||||| |||||| | ||
Sbjct: 154 gtggaagtgtggcgatgcctctttggctttttgacgccattcttgtgagccttgtaagac 95
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 94 tggttgtgagcagtgtgattcttcgacttcgccat 60
>gb|CX536563.1|CX536563 s13dNF24G10GS083_456300 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 426
Score = 93.7 bits (47), Expect = 1e-017
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 199 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 140
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| | | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 139 gtggaagtgtggcgacgcctctttggctttttgatgccattcttgtgagccttgtaagac 80
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||||| ||||||||||| |||||
Sbjct: 79 tggttgtgagcagtgtgattcttcgacttcgccat 45
>gb|BQ150662.1|BQ150662 NF041F03LF1F1028 Developing leaf Medicago truncatula cDNA clone
NF041F03LF 5', mRNA sequence
Length = 836
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 306 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 247
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 246 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 187
Query: 391 tggttatgcgccg-tgtggttcttcgacttggccat 425
||||| || || | |||| ||||||||||| |||||
Sbjct: 186 tggttgtgagcagatgtgattcttcgacttcgccat 151
>gb|BG646768.1|BG646768 EST508387 HOGA Medicago truncatula cDNA clone pHOGA-9B24 5' end,
mRNA sequence
Length = 404
Score = 85.7 bits (43), Expect = 4e-015
Identities = 128/155 (82%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 177 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 118
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 117 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 58
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || ||| | ||||||||||| |||||
Sbjct: 57 tggttgtgagcagtg-gattcttcgacttcgccat 24
>gb|BI311882.1|BI311882 EST5313632 GESD Medicago truncatula cDNA clone pGESD15D16 5' end,
mRNA sequence
Length = 409
Score = 85.7 bits (43), Expect = 4e-015
Identities = 128/155 (82%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 185 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 126
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 125 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 66
Query: 391 tggttatgcgccgtgtggttcttcgacttggccat 425
||||| || || |||| ||||||||||| |||||
Sbjct: 65 tggttgtgagcagtgt-attcttcgacttcgccat 32
>gb|AL388579.1|AL388579 MtBC49E02R1 MtBC Medicago truncatula cDNA clone MtBC49E02 T7, mRNA
sequence
Length = 390
Score = 83.8 bits (42), Expect = 1e-014
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 201 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 142
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttg 384
||||| || ||||| || | ||| ||||| |||||||| |||||||| ||||||
Sbjct: 141 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttg 88
>gb|BI272910.1|BI272910 NF098H01FL1F1015 Developing flower Medicago truncatula cDNA clone
NF098H01FL 5', mRNA sequence
Length = 260
Score = 83.8 bits (42), Expect = 1e-014
Identities = 119/145 (82%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| ||||| |||||||| |||||| || ||||||||||||
Sbjct: 195 ttcttgttgtgcttccttgcatacctntggttcctcaaaaactttggatccatccccttg 136
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaacgat 390
||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||| | ||
Sbjct: 135 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttgtaagac 76
Query: 391 tggttatgcgccgtgtggttcttcg 415
||||| || || ||||| |||||||
Sbjct: 75 tggttgtgagcagtgtgattcttcg 51
>gb|AJ497870.1|AJ497870 AJ497870 MTFLOW Medicago truncatula cDNA clone mt--abc955115f03,
mRNA sequence
Length = 369
Score = 83.8 bits (42), Expect = 1e-014
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 142 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 83
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttg 384
||||| || ||||| || | ||| ||||| |||||||| |||||||| ||||||
Sbjct: 82 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttg 29
>gb|CF068747.1|CF068747 EST669468 MTUS Medicago truncatula cDNA clone MTUS-12A1, mRNA
sequence
Length = 367
Score = 83.8 bits (42), Expect = 1e-014
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 143 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 84
Query: 331 gtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttg 384
||||| || ||||| || | ||| ||||| |||||||| |||||||| ||||||
Sbjct: 83 gtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagccttg 30
>gb|BF634623.1|BF634623 NF061H06DT1F1059 Drought Medicago truncatula cDNA clone NF061H06DT
5', mRNA sequence
Length = 458
Score = 77.8 bits (39), Expect = 9e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 355 ggcttcttgatgccgttcttgtgcgccttgaacgattggttatgcgccgtgtggttcttc 414
|||||||||||||||||||||||| |||| ||| |||||||| |||||||| |||||
Sbjct: 94 ggcttcttgatgccgttcttgtgccacttgtacgtctggttatgagccgtgtgattcttt 35
Query: 415 gacttggccat 425
|||||||||||
Sbjct: 34 gacttggccat 24
>gb|AC126780.18| Medicago truncatula clone mth2-10n4, complete sequence
Length = 139213
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 324 ccccttggtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgcctt 383
|||||||||||| || ||||| || | ||| ||||| |||||||| |||||||| |||||
Sbjct: 113907 ccccttggtggaagtgtggcgatgcctctttggctttttgatgccattcttgtgagcctt 113966
Query: 384 gaacgattggttatgcgccgtgtggttcttcgacttggccat 425
| | || ||||| || || ||||| ||||||||||| |||||
Sbjct: 113967 gtaagactggttgtgagcagtgtgattcttcgacttcgccat 114008
Score = 61.9 bits (31), Expect = 5e-008
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 328 ttggtggaggtctggcggtggcgcttgggcttcttgatgccgttcttgtgcgccttgaac 387
|||||||| || ||||| || | ||| |||||||||||||| || ||||| |||||| |
Sbjct: 109564 ttggtggaagtgtggcgatgcctctttggcttcttgatgccatttttgtgggccttgtaa 109623
Query: 388 gattggttatgcgccgtgtggttcttcgacttggccatc 426
|| ||||| || || ||||| ||||||||||| ||||||
Sbjct: 109624 gactggttgtgagcggtgtgattcttcgactttgccatc 109662
>gb|BI309783.1|BI309783 EST5311533 GESD Medicago truncatula cDNA clone pGESD4I15 5' end,
mRNA sequence
Length = 242
Score = 60.0 bits (30), Expect = 2e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 271 ttcttgttgcccttccttgagtacctcaagttcctcagaaacttcgggtccatccccttg 330
||||||||| |||||||| |||||| |||||||| |||||| || ||||||||||||
Sbjct: 87 ttcttgttgtgcttccttgcatacctctggttcctcaaaaactttggatccatccccttg 28
Query: 331 gtggaggtctggcg 344
||||| || |||||
Sbjct: 27 gtggaagtgtggcg 14
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 129,848
Number of Sequences: 392609
Number of extensions: 129848
Number of successful extensions: 9477
Number of sequences better than 0.5: 29
Number of HSP's better than 0.5 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9441
Number of HSP's gapped (non-prelim): 33
length of query: 545
length of database: 441,732,993
effective HSP length: 19
effective length of query: 526
effective length of database: 434,273,422
effective search space: 228427819972
effective search space used: 228427819972
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)