BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.680
(461 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|CR323359.1| mte1-50I9FM1 BAC end, cultivar Jemalong A17... 101 5e-020
gb|BE204236.1|BE204236 EST396912 KV0 Medicago truncatula cD... 101 5e-020
gb|AL382681.1|AL382681 MtBC09D04F1 MtBC Medicago truncatula... 101 5e-020
gb|BE999730.1|BE999730 EST431453 GVSN Medicago truncatula c... 101 5e-020
gb|BF639844.1|BF639844 NF019H01IN1F1013 Insect herbivory Me... 101 5e-020
gb|BG580808.1|BG580808 EST482537 GVN Medicago truncatula cD... 101 5e-020
gb|BI312315.1|BI312315 EST5314065 GESD Medicago truncatula ... 101 5e-020
gb|BQ138013.1|BQ138013 NF012B12PH1F1094 Phoma-infected Medi... 101 5e-020
gb|BQ149590.1|BQ149590 NF106B04FL1F1041 Developing flower M... 101 5e-020
gb|CB891862.1|CB891862 EST648831 KV3 Medicago truncatula cD... 101 5e-020
gb|CB894192.1|CB894192 EST646984 HOGA Medicago truncatula c... 101 5e-020
gb|AJ845578.1|AJ845578 AJ845578 MtSNF Medicago truncatula c... 101 5e-020
gb|CX516750.1|CX516750 s13dNF04D03VI030_390509 Virus-Infect... 101 5e-020
gb|BI270117.1|BI270117 NF009D01FL1F1014 Developing flower M... 100 2e-019
gb|CB893982.1|CB893982 EST646774 HOGA Medicago truncatula c... 94 1e-017
gb|BQ147767.1|BQ147767 NF046E01FL1F1006 Developing flower M... 92 5e-017
gb|CX538987.1|CX538987 s13dNF45H01GS012_461234 Germinating ... 90 2e-016
gb|BM778933.1|BM778933 EST589508 KV2 Medicago truncatula cD... 88 8e-016
gb|CG928999.1|CG928999 MBEBS42TRB mth2 Medicago truncatula ... 84 1e-014
gb|BE205491.1|BE205491 EST398167 KV0 Medicago truncatula cD... 84 1e-014
gb|AL381619.1|AL381619 MtBC02A05F3 MtBC Medicago truncatula... 84 1e-014
gb|BI272068.1|BI272068 NF019C09FL1F1069 Developing flower M... 84 1e-014
gb|CA990247.1|CA990247 EST643755 GESD Medicago truncatula c... 84 1e-014
gb|AJ845437.1|AJ845437 AJ845437 MtSNF Medicago truncatula c... 84 1e-014
gb|AC146783.3| Medicago truncatula clone mth2-115m15, WORKI... 84 1e-014
gb|AW774326.1|AW774326 EST333477 KV3 Medicago truncatula cD... 82 5e-014
gb|AL373484.1|AL373484 MtBB01A12F2 MtBB Medicago truncatula... 82 5e-014
gb|AL388872.1|AL388872 MtBC51C08R2 MtBC Medicago truncatula... 82 5e-014
gb|AL389311.1|AL389311 MtBC54A11F1 MtBC Medicago truncatula... 82 5e-014
gb|BI272786.1|BI272786 NF092B07FL1F1060 Developing flower M... 82 5e-014
gb|BQ147880.1|BQ147880 NF048C04FL1F1033 Developing flower M... 82 5e-014
gb|CB895063.1|CB895063 EST647855 HOGA Medicago truncatula c... 82 5e-014
gb|CA919763.1|CA919763 EST637481 MTUS Medicago truncatula c... 82 5e-014
gb|BI270747.1|BI270747 NF001F06FL1F1059 Developing flower M... 78 7e-013
gb|AW257173.1|AW257173 EST305310 KV2 Medicago truncatula cD... 68 7e-010
gb|BG645562.1|BG645562 EST507181 KV3 Medicago truncatula cD... 60 2e-007
gb|CF069218.1|CF069218 EST669939 MTUS Medicago truncatula c... 58 7e-007
gb|AJ846898.1|AJ846898 AJ846898 MtSTW Medicago truncatula c... 52 4e-005
gb|BG453625.1|BG453625 NF097B11LF1F1090 Developing leaf Med... 50 2e-004
gb|BG582041.1|BG582041 EST483779 GVN Medicago truncatula cD... 50 2e-004
gb|AJ500082.1|AJ500082 AJ500082 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ500141.1|AJ500141 AJ500141 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ500542.1|AJ500542 AJ500542 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ500564.1|AJ500564 AJ500564 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ500591.1|AJ500591 AJ500591 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ500841.1|AJ500841 AJ500841 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ499636.1|AJ499636 AJ499636 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ499814.1|AJ499814 AJ499814 MTGIM Medicago truncatula c... 48 6e-004
gb|AJ864411.1|AJ864411 AJ864411 Medicago truncatula cv. J5 ... 48 6e-004
gb|AJ500058.1|AJ500058 AJ500058 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500142.1|AJ500142 AJ500142 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500169.1|AJ500169 AJ500169 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500179.1|AJ500179 AJ500179 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500199.1|AJ500199 AJ500199 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500204.1|AJ500204 AJ500204 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500279.1|AJ500279 AJ500279 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500399.1|AJ500399 AJ500399 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500507.1|AJ500507 AJ500507 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500541.1|AJ500541 AJ500541 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500579.1|AJ500579 AJ500579 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500615.1|AJ500615 AJ500615 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500633.1|AJ500633 AJ500633 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500744.1|AJ500744 AJ500744 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500747.1|AJ500747 AJ500747 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500758.1|AJ500758 AJ500758 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500834.1|AJ500834 AJ500834 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500874.1|AJ500874 AJ500874 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500875.1|AJ500875 AJ500875 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500879.1|AJ500879 AJ500879 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500908.1|AJ500908 AJ500908 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500916.1|AJ500916 AJ500916 MTGIM Medicago truncatula c... 46 0.003
gb|AJ500940.1|AJ500940 AJ500940 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499543.1|AJ499543 AJ499543 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499713.1|AJ499713 AJ499713 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499723.1|AJ499723 AJ499723 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499788.1|AJ499788 AJ499788 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499850.1|AJ499850 AJ499850 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499978.1|AJ499978 AJ499978 MTGIM Medicago truncatula c... 46 0.003
gb|AJ499991.1|AJ499991 AJ499991 MTGIM Medicago truncatula c... 46 0.003
gb|AJ548235.1|AJ548235 AJ548235 MTAPHEU Medicago truncatula... 46 0.003
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 46 0.003
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 46 0.003
gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 ... 46 0.003
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500313.1|AJ500313 AJ500313 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500321.1|AJ500321 AJ500321 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500346.1|AJ500346 AJ500346 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500388.1|AJ500388 AJ500388 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500430.1|AJ500430 AJ500430 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500466.1|AJ500466 AJ500466 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500506.1|AJ500506 AJ500506 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500743.1|AJ500743 AJ500743 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500761.1|AJ500761 AJ500761 MTGIM Medicago truncatula c... 44 0.010
gb|AJ500913.1|AJ500913 AJ500913 MTGIM Medicago truncatula c... 44 0.010
gb|AJ499251.1|AJ499251 AJ499251 MTGIM Medicago truncatula c... 44 0.010
gb|AJ499345.1|AJ499345 AJ499345 MTGIM Medicago truncatula c... 44 0.010
gb|AJ499430.1|AJ499430 AJ499430 MTGIM Medicago truncatula c... 44 0.010
gb|AJ499628.1|AJ499628 AJ499628 MTGIM Medicago truncatula c... 44 0.010
gb|AJ499752.1|AJ499752 AJ499752 MTGIM Medicago truncatula c... 44 0.010
gb|AJ499771.1|AJ499771 AJ499771 MTGIM Medicago truncatula c... 44 0.010
gb|BG581556.1|BG581556 EST483290 GVN Medicago truncatula cD... 42 0.040
gb|BG644566.1|BG644566 EST506185 KV3 Medicago truncatula cD... 42 0.040
gb|BM779839.1|BM779839 EST590415 KV2 Medicago truncatula cD... 42 0.040
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 42 0.040
gb|AJ864414.1|AJ864414 AJ864414 Medicago truncatula cv. J5 ... 42 0.040
gb|AJ864442.1|AJ864442 AJ864442 Medicago truncatula cv. J5 ... 42 0.040
gb|AJ500151.1|AJ500151 AJ500151 MTGIM Medicago truncatula c... 40 0.16
gb|AJ500201.1|AJ500201 AJ500201 MTGIM Medicago truncatula c... 40 0.16
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 40 0.16
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 40 0.16
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 40 0.16
gb|AJ500847.1|AJ500847 AJ500847 MTGIM Medicago truncatula c... 40 0.16
gb|AJ499925.1|AJ499925 AJ499925 MTGIM Medicago truncatula c... 40 0.16
>emb|CR323359.1| mte1-50I9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 782
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 197 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 256
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 257 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 316
Query: 376 ttc 378
|||
Sbjct: 317 ttc 319
>gb|BE204236.1|BE204236 EST396912 KV0 Medicago truncatula cDNA clone pKV0-14L16, mRNA
sequence
Length = 708
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 557 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 498
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 497 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 438
Query: 376 ttc 378
|||
Sbjct: 437 ttc 435
>gb|AL382681.1|AL382681 MtBC09D04F1 MtBC Medicago truncatula cDNA clone MtBC09D04 T3, mRNA
sequence
Length = 454
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 424 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 365
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 364 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 305
Query: 376 ttc 378
|||
Sbjct: 304 ttc 302
>gb|BE999730.1|BE999730 EST431453 GVSN Medicago truncatula cDNA clone pGVSN-24K2, mRNA
sequence
Length = 480
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 459 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 400
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 399 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 340
Query: 376 ttc 378
|||
Sbjct: 339 ttc 337
>gb|BF639844.1|BF639844 NF019H01IN1F1013 Insect herbivory Medicago truncatula cDNA clone
NF019H01IN 5', mRNA sequence
Length = 653
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 304 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 245
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 244 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 185
Query: 376 ttc 378
|||
Sbjct: 184 ttc 182
>gb|BG580808.1|BG580808 EST482537 GVN Medicago truncatula cDNA clone pGVN-62K19 5' end,
mRNA sequence
Length = 557
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 311 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 252
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 251 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 192
Query: 376 ttc 378
|||
Sbjct: 191 ttc 189
>gb|BI312315.1|BI312315 EST5314065 GESD Medicago truncatula cDNA clone pGESD17N11 5' end,
mRNA sequence
Length = 778
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 227 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 168
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 167 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 108
Query: 376 ttc 378
|||
Sbjct: 107 ttc 105
>gb|BQ138013.1|BQ138013 NF012B12PH1F1094 Phoma-infected Medicago truncatula cDNA clone
NF012B12PH 5', mRNA sequence
Length = 669
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 253 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 194
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 193 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 134
Query: 376 ttc 378
|||
Sbjct: 133 ttc 131
>gb|BQ149590.1|BQ149590 NF106B04FL1F1041 Developing flower Medicago truncatula cDNA clone
NF106B04FL 5', mRNA sequence
Length = 639
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 229 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 170
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 169 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 110
Query: 376 ttc 378
|||
Sbjct: 109 ttc 107
>gb|CB891862.1|CB891862 EST648831 KV3 Medicago truncatula cDNA clone KV3-52K12, mRNA
sequence
Length = 672
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 538 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 597
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 598 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 657
Query: 376 ttc 378
|||
Sbjct: 658 ttc 660
>gb|CB894192.1|CB894192 EST646984 HOGA Medicago truncatula cDNA clone HOGA-30I24, mRNA
sequence
Length = 805
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 795 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 736
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 735 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 676
Query: 376 ttc 378
|||
Sbjct: 675 ttc 673
>gb|AJ845578.1|AJ845578 AJ845578 MtSNF Medicago truncatula cDNA clone MtNF07G18N1, mRNA
sequence
Length = 311
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 136 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 77
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 76 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 17
Query: 376 ttc 378
|||
Sbjct: 16 ttc 14
>gb|CX516750.1|CX516750 s13dNF04D03VI030_390509 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 531
Score = 101 bits (51), Expect = 5e-020
Identities = 105/123 (85%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 191 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 132
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 131 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 72
Query: 376 ttc 378
|||
Sbjct: 71 ttc 69
>gb|BI270117.1|BI270117 NF009D01FL1F1014 Developing flower Medicago truncatula cDNA clone
NF009D01FL 5', mRNA sequence
Length = 332
Score = 99.6 bits (50), Expect = 2e-019
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 116 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 57
Query: 316 agcaataccatcag 329
||||| |||||||
Sbjct: 56 agcaactccatcag 43
>gb|CB893982.1|CB893982 EST646774 HOGA Medicago truncatula cDNA clone HOGA-29L21, mRNA
sequence
Length = 864
Score = 93.7 bits (47), Expect = 1e-017
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || ||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 839 gtacagaccacggtagacaatgattcccacacaggagatgttgaaaccacggtaaagccc 780
Query: 316 agcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcct 375
||||| ||||||| || ||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 779 agcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcct 720
Query: 376 ttc 378
|||
Sbjct: 719 ttc 717
>gb|BQ147767.1|BQ147767 NF046E01FL1F1006 Developing flower Medicago truncatula cDNA clone
NF046E01FL 5', mRNA sequence
Length = 360
Score = 91.7 bits (46), Expect = 5e-017
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 207 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 148
Query: 316 ag 317
||
Sbjct: 147 ag 146
>gb|CX538987.1|CX538987 s13dNF45H01GS012_461234 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 537
Score = 89.7 bits (45), Expect = 2e-016
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 256 gtacagaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagccc 315
|||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 62 gtacagaccacggtagacaatgattccaacacaggagatgttgaaaccacggtaaagccc 3
Query: 316 a 316
|
Sbjct: 2 a 2
>gb|BM778933.1|BM778933 EST589508 KV2 Medicago truncatula cDNA clone pKV2-20O9, mRNA
sequence
Length = 790
Score = 87.7 bits (44), Expect = 8e-016
Identities = 105/124 (84%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 256 gtacagaccacgataaacaatgattccaacaca-ggagatgttaaatccacggtaaagcc 314
|||||||||||| || ||||||||||||||||| ||||||||| || |||||||||||||
Sbjct: 666 gtacagaccacggtagacaatgattccaacacagggagatgttgaaaccacggtaaagcc 725
Query: 315 cagcaataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcc 374
|||||| ||||||| || ||||| ||| ||||| ||||| |||||||||||||
Sbjct: 726 cagcaactccatcagtagcaagagtcttcttgtaaacatcaacaagaccattgaactgcc 785
Query: 375 tttc 378
||||
Sbjct: 786 tttc 789
>gb|CG928999.1|CG928999 MBEBS42TRB mth2 Medicago truncatula genomic clone 22H11, DNA
sequence
Length = 954
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 742 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 683
Query: 320 ataccatcag 329
||||||||||
Sbjct: 682 ataccatcag 673
>gb|BE205491.1|BE205491 EST398167 KV0 Medicago truncatula cDNA clone pKV0-21F2, mRNA
sequence
Length = 583
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 426 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 367
Query: 320 ataccatcag 329
||||||||||
Sbjct: 366 ataccatcag 357
>gb|AL381619.1|AL381619 MtBC02A05F3 MtBC Medicago truncatula cDNA clone MtBC02A05 T3, mRNA
sequence
Length = 491
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 111 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 52
Query: 320 ataccatcag 329
||||||||||
Sbjct: 51 ataccatcag 42
>gb|BI272068.1|BI272068 NF019C09FL1F1069 Developing flower Medicago truncatula cDNA clone
NF019C09FL 5', mRNA sequence
Length = 718
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 514 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 455
Query: 320 ataccatcag 329
||||||||||
Sbjct: 454 ataccatcag 445
>gb|CA990247.1|CA990247 EST643755 GESD Medicago truncatula cDNA clone GESD-28C13, mRNA
sequence
Length = 488
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 149 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 90
Query: 320 ataccatcag 329
||||||||||
Sbjct: 89 ataccatcag 80
>gb|AJ845437.1|AJ845437 AJ845437 MtSNF Medicago truncatula cDNA clone MtNF04J08N1, mRNA
sequence
Length = 316
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 149 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 208
Query: 320 ataccatcag 329
||||||||||
Sbjct: 209 ataccatcag 218
>gb|AC146783.3| Medicago truncatula clone mth2-115m15, WORKING DRAFT SEQUENCE, 16
unordered pieces
Length = 43877
Score = 83.8 bits (42), Expect = 1e-014
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 29388 agaccacgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 29329
Query: 320 ataccatcag 329
||||||||||
Sbjct: 29328 ataccatcag 29319
>gb|AW774326.1|AW774326 EST333477 KV3 Medicago truncatula cDNA clone pKV3-22A20, mRNA
sequence
Length = 682
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 549 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 490
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 489 atgccatcagact 477
>gb|AL373484.1|AL373484 MtBB01A12F2 MtBB Medicago truncatula cDNA clone MtBB01A12 T3, mRNA
sequence
Length = 496
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 264 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 205
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 204 atgccatcagact 192
>gb|AL388872.1|AL388872 MtBC51C08R2 MtBC Medicago truncatula cDNA clone MtBC51C08 T7, mRNA
sequence
Length = 501
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 86 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 27
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 26 atgccatcagact 14
>gb|AL389311.1|AL389311 MtBC54A11F1 MtBC Medicago truncatula cDNA clone MtBC54A11 T3, mRNA
sequence
Length = 492
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 222 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 163
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 162 atgccatcagact 150
>gb|BI272786.1|BI272786 NF092B07FL1F1060 Developing flower Medicago truncatula cDNA clone
NF092B07FL 5', mRNA sequence
Length = 661
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 355 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 296
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 295 atgccatcagact 283
>gb|BQ147880.1|BQ147880 NF048C04FL1F1033 Developing flower Medicago truncatula cDNA clone
NF048C04FL 5', mRNA sequence
Length = 448
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 358 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 299
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 298 atgccatcagact 286
>gb|CB895063.1|CB895063 EST647855 HOGA Medicago truncatula cDNA clone HOGA-33B1, mRNA
sequence
Length = 811
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 760 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 701
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 700 atgccatcagact 688
>gb|CA919763.1|CA919763 EST637481 MTUS Medicago truncatula cDNA clone MTUS-17G7, mRNA
sequence
Length = 596
Score = 81.8 bits (41), Expect = 5e-014
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| |||||||| ||||| ||||||
Sbjct: 521 agaccacgatacactataattccaacacacgagatgttgaatccacgataaaggccagca 580
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 581 atgccatcagact 593
>gb|BI270747.1|BI270747 NF001F06FL1F1059 Developing flower Medicago truncatula cDNA clone
NF001F06FL 5', mRNA sequence
Length = 583
Score = 77.8 bits (39), Expect = 7e-013
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 483 agaccncgatacacaatgattccgacacaagagatattgaaaccacggtaaaggccagca 424
Query: 320 ataccatcag 329
||||||||||
Sbjct: 423 ataccatcag 414
>gb|AW257173.1|AW257173 EST305310 KV2 Medicago truncatula cDNA clone KV2-7B3, mRNA sequence
Length = 396
Score = 67.9 bits (34), Expect = 7e-010
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||| ||||| ||||| || || ||||||||||| ||||||
Sbjct: 385 agaccacgatactcaatgattcggacacaagagatattgaaaccacggtaaaggccagca 326
Query: 320 ataccatcag 329
||||||||||
Sbjct: 325 ataccatcag 316
>gb|BG645562.1|BG645562 EST507181 KV3 Medicago truncatula cDNA clone pKV3-46N1 5' end, mRNA
sequence
Length = 731
Score = 60.0 bits (30), Expect = 2e-007
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 272 acaatgattccaacacaggagatgttaaatccacggtaaagcccagcaataccatcag 329
||||||||||| ||||| ||||| | ||| ||||||||||| ||||||||||||||||
Sbjct: 716 acaatgattccgacacaagagatatgaaa-ccacggtaaaggccagcaataccatcag 660
>gb|CF069218.1|CF069218 EST669939 MTUS Medicago truncatula cDNA clone MTUS-17G7, mRNA
sequence
Length = 773
Score = 58.0 bits (29), Expect = 7e-007
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| || || ||||||||||| |||||||| ||||||| ||||| ||||||
Sbjct: 760 agaccacgatacactat-attccaacacacgagatgtt-gatccacgataaaggccagca 703
Query: 320 ataccatcagact 332
|| ||||||||||
Sbjct: 702 atgccatcagact 690
>gb|AJ846898.1|AJ846898 AJ846898 MtSTW Medicago truncatula cDNA clone MtTW01A03N1, mRNA
sequence
Length = 196
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 436 ggagtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||||
Sbjct: 171 ggagtacctcggccgcgaccacgcta 196
>gb|BG453625.1|BG453625 NF097B11LF1F1090 Developing leaf Medicago truncatula cDNA clone
NF097B11LF 5', mRNA sequence
Length = 661
Score = 50.1 bits (25), Expect = 2e-004
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 287 caggagatgttaaatccacggtaaagcccagcaataccatcagacttgagtgtcttgcgg 346
||| ||||||| || ||||||||||||||||||| ||||||| || ||||| |
Sbjct: 661 cagnagatgttgaaaccacggtaaagcccagcaactccatcagtagcaagagtcttcttg 602
Query: 347 tagacatcgacaagcccattgaactgcctttc 378
|| ||||| ||||| |||||||||||||||||
Sbjct: 601 taaacatcaacaagaccattgaactgcctttc 570
>gb|BG582041.1|BG582041 EST483779 GVN Medicago truncatula cDNA clone pGVN-66F17 5' end,
mRNA sequence
Length = 801
Score = 50.1 bits (25), Expect = 2e-004
Identities = 83/101 (82%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 279 ttccaacacaggagatgttaaatccacggt-aaagcccagcaataccatcagacttgagt 337
||||| |||||||||||| ||| ||||||| |||||||||||| ||||||| ||
Sbjct: 801 ttccaccacaggagatgtgaaacccacggtaaaagcccagcaactccatcagtagcaaga 742
Query: 338 gtcttgcggtagacatcgacaagcccattgaactgcctttc 378
||||| ||| ||||| ||||| |||||||||||||||||
Sbjct: 741 gtcttcttgtaaacatcaacaagaccattgaactgcctttc 701
>gb|AJ500082.1|AJ500082 AJ500082 MTGIM Medicago truncatula cDNA clone mtgmacc120012d08,
mRNA sequence
Length = 181
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 158 agtacctcggccgcgaccacgcta 181
>gb|AJ500141.1|AJ500141 AJ500141 MTGIM Medicago truncatula cDNA clone mtgmacc120013b10,
mRNA sequence
Length = 141
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 118 agtacctcggccgcgaccacgcta 141
>gb|AJ500542.1|AJ500542 AJ500542 MTGIM Medicago truncatula cDNA clone mtgmacc120017e10,
mRNA sequence
Length = 302
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 279 agtacctcggccgcgaccacgcta 302
>gb|AJ500564.1|AJ500564 AJ500564 MTGIM Medicago truncatula cDNA clone mtgmacc120017g08,
mRNA sequence
Length = 319
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 296 agtacctcggccgcgaccacgcta 319
>gb|AJ500591.1|AJ500591 AJ500591 MTGIM Medicago truncatula cDNA clone mtgmacc120018b01,
mRNA sequence
Length = 303
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 280 agtacctcggccgcgaccacgcta 303
>gb|AJ500841.1|AJ500841 AJ500841 MTGIM Medicago truncatula cDNA clone mtgmacc120020g07,
mRNA sequence
Length = 229
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 437 gagtacctcggccgcgaccacgct 460
||||||||||||||||||||||||
Sbjct: 24 gagtacctcggccgcgaccacgct 1
>gb|AJ499636.1|AJ499636 AJ499636 MTGIM Medicago truncatula cDNA clone mtgmacc120006f02,
mRNA sequence
Length = 291
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 268 agtacctcggccgcgaccacgcta 291
>gb|AJ499814.1|AJ499814 AJ499814 MTGIM Medicago truncatula cDNA clone mtgmacc120008g12,
mRNA sequence
Length = 261
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 238 agtacctcggccgcgaccacgcta 261
>gb|AJ864411.1|AJ864411 AJ864411 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs313, mRNA sequence
Length = 500
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 438 agtacctcggccgcgaccacgcta 461
||||||||||||||||||||||||
Sbjct: 76 agtacctcggccgcgaccacgcta 53
>gb|AJ500058.1|AJ500058 AJ500058 MTGIM Medicago truncatula cDNA clone mtgmacc120012b02,
mRNA sequence
Length = 182
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 438 agtacctcggccgcgaccacgct 460
|||||||||||||||||||||||
Sbjct: 23 agtacctcggccgcgaccacgct 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 78,364
Number of Sequences: 392609
Number of extensions: 78364
Number of successful extensions: 6122
Number of sequences better than 0.5: 120
Number of HSP's better than 0.5 without gapping: 119
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5973
Number of HSP's gapped (non-prelim): 147
length of query: 461
length of database: 441,732,993
effective HSP length: 19
effective length of query: 442
effective length of database: 434,273,422
effective search space: 191948852524
effective search space used: 191948852524
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)