BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCN21e10.yg.2.1
(247 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA... 42 2e-004
gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA... 42 2e-004
gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDN... 40 7e-004
gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA... 40 7e-004
gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA... 40 7e-004
gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA... 40 7e-004
gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted... 40 7e-004
gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted ... 40 7e-004
gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted ... 40 7e-004
gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted... 40 7e-004
gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted... 40 7e-004
gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted ... 40 7e-004
gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted... 40 7e-004
gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted... 40 7e-004
gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted ... 40 7e-004
gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted ... 40 7e-004
gb|AW698886.1|AW698886 r151 non-glandular-haired subtracted... 40 7e-004
gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted ... 40 7e-004
gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA ... 36 0.011
gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted... 36 0.011
gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted... 36 0.011
gb|AW698699.1|AW698699 R149 non-glandular-haired subtracted... 36 0.011
gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted ... 36 0.011
gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted ... 36 0.011
gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted ... 36 0.011
gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted c... 36 0.011
gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x va... 36 0.011
gb|AW698354.1|AW698354 g40 glandular-haired subtracted cDNA... 34 0.043
gb|AW698355.1|AW698355 g43 glandular-haired subtracted cDNA... 34 0.043
gb|AW698680.1|AW698680 R116 non-glandular-haired subtracted... 34 0.043
gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted... 34 0.043
gb|CO513854.1|CO513854 s13dSG73D0600046_156370 Glandular tr... 34 0.043
gb|DQ122784.1| Medicago sativa clone C43 putative splicing ... 34 0.043
gb|AW698346.1|AW698346 G75 glandular-haired subtracted cDNA... 32 0.17
gb|AW698402.1|AW698402 G249 glandular-haired subtracted cDN... 32 0.17
gb|AW698490.1|AW698490 g454 glandular-haired subtracted cDN... 32 0.17
gb|AW698492.1|AW698492 g456 glandular-haired subtracted cDN... 32 0.17
gb|AW698526.1|AW698526 g320 glandular-haired subtracted cDN... 32 0.17
gb|AW698687.1|AW698687 R128 non-glandular-haired subtracted... 32 0.17
gb|AW698884.1|AW698884 r147 non-glandular-haired subtracted... 32 0.17
gb|AW698894.1|AW698894 r167 non-glandular-haired subtracted... 32 0.17
gb|AJ888498.1|AJ888498 AJ888498 Medicago sativa subsp. x va... 32 0.17
gb|AJ248339.1|AJ248339 AJ248339 Medicago sativa subsp. x va... 30 0.67
gb|AW698673.1|AW698673 R101 non-glandular-haired subtracted... 30 0.67
gb|AW698682.1|AW698682 R120 non-glandular-haired subtracted... 30 0.67
gb|AW698887.1|AW698887 r152 non-glandular-haired subtracted... 30 0.67
emb|X88864.1|MSCYCPROT M.sativa mRNA for cyclin protein 30 0.67
emb|AJ132929.1|MSA132929 Medicago sativa cycD3 gene, type I... 30 0.67
emb|AJ132930.1|MSA132930 Medicago sativa cycD3 gene. type I... 30 0.67
gb|AW698339.1|AW698339 g122 glandular-haired subtracted cDN... 28 2.6
gb|AW698340.1|AW698340 G44 glandular-haired subtracted cDNA... 28 2.6
gb|AW698587.1|AW698587 g507 glandular-haired subtracted cDN... 28 2.6
gb|AW698692.1|AW698692 R139 non-glandular-haired subtracted... 28 2.6
gb|AW698900.1|AW698900 r85 non-glandular-haired subtracted ... 28 2.6
gb|AJ410132.1|AJ410132 AJ410132 Medicago sativa library (Ka... 28 2.6
gb|CO512034.1|CO512034 s13dSG18A1000069_108388 Glandular tr... 28 2.6
gb|CO512464.1|CO512464 s13dSG100C090006_114442 Glandular tr... 28 2.6
gb|CO512556.1|CO512556 s13dSG08E0500035_121038 Glandular tr... 28 2.6
gb|CO513321.1|CO513321 s13dSG37F0700059_129806 Glandular tr... 28 2.6
gb|CO513441.1|CO513441 s13dSG10C0100002_130046 Glandular tr... 28 2.6
gb|CO514700.1|CO514700 s13dSG55A0800065_328060 Glandular tr... 28 2.6
gb|CO514784.1|CO514784 s13dSG59B1000089_328228 Glandular tr... 28 2.6
gb|CO515438.1|CO515438 s13dSG50G0300024_417935 Glandular tr... 28 2.6
gb|CO515630.1|CO515630 s13dSG47H0700064_418319 Glandular tr... 28 2.6
gb|CO515841.1|CO515841 s13dSG54F1000089_421221 Glandular tr... 28 2.6
gb|CO515848.1|CO515848 s13dSG54G0700054_421235 Glandular tr... 28 2.6
gb|CO516351.1|CO516351 s13dSG99D1200102_446030 Glandular tr... 28 2.6
gb|CO517167.1|CO517167 s13dSG33D0800074_474418 Glandular tr... 28 2.6
gb|M91076.1|ALFMSENODC Medicago sativa leghemoglobin (ENOD1... 28 2.6
>gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 327
Score = 42.1 bits (21), Expect = 2e-004
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtact 21
|||||||||||||||||||||
Sbjct: 310 gcggccgcccgggcaggtact 290
>gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 365
Score = 42.1 bits (21), Expect = 2e-004
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtact 21
|||||||||||||||||||||
Sbjct: 4 gcggccgcccgggcaggtact 24
>gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 264
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 260 gcggccgcccgggcaggtac 241
>gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 407
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 93 gcggccgcccgggcaggtac 112
>gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 274
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 270 gcggccgcccgggcaggtac 251
>gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 251
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 289
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 168
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 527
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 393
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 389 gcggccgcccgggcaggtac 370
>gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 356
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 4 gcggccgcccgggcaggtac 23
>gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 354
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 326
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 4 gcggccgcccgggcaggtac 23
>gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 440
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 434
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 4 gcggccgcccgggcaggtac 23
>gb|AW698886.1|AW698886 r151 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 129
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggtac 24
>gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 212
Score = 40.1 bits (20), Expect = 7e-004
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 208 gcggccgcccgggcaggtac 189
>gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 483
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 4 gcggccgcccgggcaggt 21
>gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 252
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 248 gcggccgcccgggcaggt 231
>gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 418
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggt 22
>gb|AW698699.1|AW698699 R149 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 275
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 5 gcggccgcccgggcaggt 22
>gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 343
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 339 gcggccgcccgggcaggt 322
>gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 384
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 380 gcggccgcccgggcaggt 363
>gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 330
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 326 gcggccgcccgggcaggt 309
>gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 370
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 366 gcggccgcccgggcaggt 349
>gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 561
Score = 36.2 bits (18), Expect = 0.011
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 555 gcggccgcccgggcaggt 538
>gb|AW698354.1|AW698354 g40 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 307
Score = 34.2 bits (17), Expect = 0.043
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtact 21
||||| |||||||||||||||
Sbjct: 280 gcggcagcccgggcaggtact 260
>gb|AW698355.1|AW698355 g43 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 168
Score = 34.2 bits (17), Expect = 0.043
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 168 ccgcccgggcaggtact 152
>gb|AW698680.1|AW698680 R116 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 290
Score = 34.2 bits (17), Expect = 0.043
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 283 ccgcccgggcaggtact 267
>gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 340
Score = 34.2 bits (17), Expect = 0.043
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcagg 17
|||||||||||||||||
Sbjct: 328 gcggccgcccgggcagg 312
>gb|CO513854.1|CO513854 s13dSG73D0600046_156370 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 594
Score = 34.2 bits (17), Expect = 0.043
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 35 attgttgtgtagtaaca 51
|||||||||||||||||
Sbjct: 4 attgttgtgtagtaaca 20
>gb|DQ122784.1| Medicago sativa clone C43 putative splicing factor Prp8 mRNA,
partial cds
Length = 552
Score = 34.2 bits (17), Expect = 0.043
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtact 21
|||||||||||| ||||||||
Sbjct: 498 gcggccgcccggccaggtact 478
>gb|AW698346.1|AW698346 G75 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 225
Score = 32.2 bits (16), Expect = 0.17
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 225 ccgcccgggcaggtac 210
>gb|AW698402.1|AW698402 G249 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 316
Score = 32.2 bits (16), Expect = 0.17
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcag 16
||||||||||||||||
Sbjct: 304 gcggccgcccgggcag 289
>gb|AW698490.1|AW698490 g454 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 115
Score = 32.2 bits (16), Expect = 0.17
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
|||||||||||| |||||||
Sbjct: 5 gcggccgcccggccaggtac 24
>gb|AW698492.1|AW698492 g456 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 110
Score = 32.2 bits (16), Expect = 0.17
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
|||||||||||| |||||||
Sbjct: 5 gcggccgcccggccaggtac 24
>gb|AW698526.1|AW698526 g320 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 223
Score = 32.2 bits (16), Expect = 0.17
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
|||||||||||| |||||||
Sbjct: 5 gcggccgcccggacaggtac 24
>gb|AW698687.1|AW698687 R128 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 477
Score = 32.2 bits (16), Expect = 0.17
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 3 ggccgcccgggcaggt 18
||||||||||||||||
Sbjct: 470 ggccgcccgggcaggt 455
>gb|AW698884.1|AW698884 r147 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 178
Score = 32.2 bits (16), Expect = 0.17
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 10 ccgcccgggcaggtac 25
>gb|AW698894.1|AW698894 r167 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 262
Score = 32.2 bits (16), Expect = 0.17
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 3 ggccgcccgggcaggt 18
||||||||||||||||
Sbjct: 8 ggccgcccgggcaggt 23
>gb|AJ888498.1|AJ888498 AJ888498 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 530
Score = 32.2 bits (16), Expect = 0.17
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 522 ccgcccgggcaggtac 507
>gb|AJ248339.1|AJ248339 AJ248339 Medicago sativa subsp. x varia young root nodule Medicago
sativa subsp. x varia cDNA clone MsNod800, mRNA sequence
Length = 499
Score = 30.2 bits (15), Expect = 0.67
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 133 tatctttgcctcaaa 147
|||||||||||||||
Sbjct: 153 tatctttgcctcaaa 139
>gb|AW698673.1|AW698673 R101 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 481
Score = 30.2 bits (15), Expect = 0.67
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggta 19
|||||||||||||||
Sbjct: 481 ccgcccgggcaggta 467
>gb|AW698682.1|AW698682 R120 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 181
Score = 30.2 bits (15), Expect = 0.67
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
|||| |||||||||||||
Sbjct: 4 gcggncgcccgggcaggt 21
>gb|AW698887.1|AW698887 r152 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 198
Score = 30.2 bits (15), Expect = 0.67
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtact 21
|||||||||||||||
Sbjct: 187 gcccgggcaggtact 173
>emb|X88864.1|MSCYCPROT M.sativa mRNA for cyclin protein
Length = 1861
Score = 30.2 bits (15), Expect = 0.67
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 135 tctttgcctcaaaca 149
|||||||||||||||
Sbjct: 819 tctttgcctcaaaca 805
>emb|AJ132929.1|MSA132929 Medicago sativa cycD3 gene, type I promoter and exons 1-4
Length = 4553
Score = 30.2 bits (15), Expect = 0.67
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 135 tctttgcctcaaaca 149
|||||||||||||||
Sbjct: 2397 tctttgcctcaaaca 2383
>emb|AJ132930.1|MSA132930 Medicago sativa cycD3 gene. type II promoter and exons 1-2
Length = 3054
Score = 30.2 bits (15), Expect = 0.67
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 135 tctttgcctcaaaca 149
|||||||||||||||
Sbjct: 2963 tctttgcctcaaaca 2949
>gb|AW698339.1|AW698339 g122 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 390
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtac 20
||||||||||||||
Sbjct: 390 gcccgggcaggtac 377
>gb|AW698340.1|AW698340 G44 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 110
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 8 cccgggcaggtact 21
||||||||||||||
Sbjct: 103 cccgggcaggtact 90
>gb|AW698587.1|AW698587 g507 glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 407
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 63 gaagaaatcaaagc 50
>gb|AW698692.1|AW698692 R139 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 269
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggt 18
||||||||||||||
Sbjct: 269 ccgcccgggcaggt 256
>gb|AW698900.1|AW698900 r85 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 301
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtac 20
||||||||||||||
Sbjct: 301 gcccgggcaggtac 288
>gb|AJ410132.1|AJ410132 AJ410132 Medicago sativa library (Kalo P) Medicago sativa cDNA
clone U522, mRNA sequence
Length = 656
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 31 gaagaaatcaaagc 18
>gb|CO512034.1|CO512034 s13dSG18A1000069_108388 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 587
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 151 agatatttgattga 164
||||||||||||||
Sbjct: 388 agatatttgattga 401
>gb|CO512464.1|CO512464 s13dSG100C090006_114442 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 273
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 173 tcccttcctttgcc 186
||||||||||||||
Sbjct: 195 tcccttcctttgcc 182
>gb|CO512556.1|CO512556 s13dSG08E0500035_121038 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 590
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 77 gaagaaatcaaagc 64
>gb|CO513321.1|CO513321 s13dSG37F0700059_129806 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 578
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 152 gatatttgattgag 165
||||||||||||||
Sbjct: 21 gatatttgattgag 8
>gb|CO513441.1|CO513441 s13dSG10C0100002_130046 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 588
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 77 gaagaaatcaaagc 64
>gb|CO514700.1|CO514700 s13dSG55A0800065_328060 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 514
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 29 aaaccaattgttgt 42
||||||||||||||
Sbjct: 412 aaaccaattgttgt 425
>gb|CO514784.1|CO514784 s13dSG59B1000089_328228 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 434
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 77 gaagaaatcaaagc 64
>gb|CO515438.1|CO515438 s13dSG50G0300024_417935 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 581
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 74 gaagaaatcaaagc 61
>gb|CO515630.1|CO515630 s13dSG47H0700064_418319 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 590
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 57 gcatcctgaagaaa 70
||||||||||||||
Sbjct: 439 gcatcctgaagaaa 452
>gb|CO515841.1|CO515841 s13dSG54F1000089_421221 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 569
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 89 gaagaaatcaaagc 76
>gb|CO515848.1|CO515848 s13dSG54G0700054_421235 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 542
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 105 gaagaaatcaaagc 92
>gb|CO516351.1|CO516351 s13dSG99D1200102_446030 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 445
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 64 gaagaaatcaaagc 77
||||||||||||||
Sbjct: 214 gaagaaatcaaagc 201
>gb|CO517167.1|CO517167 s13dSG33D0800074_474418 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 557
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 116 tcgccattgccatt 129
||||||||||||||
Sbjct: 444 tcgccattgccatt 431
>gb|M91076.1|ALFMSENODC Medicago sativa leghemoglobin (ENOD10-3) mRNA, complete cds
Length = 1459
Score = 28.2 bits (14), Expect = 2.6
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 156 tttgattgagacct 169
||||||||||||||
Sbjct: 731 tttgattgagacct 744
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: May 2, 2006 2:40 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 948
Number of Sequences: 7669
Number of extensions: 948
Number of successful extensions: 337
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 267
Number of HSP's gapped (non-prelim): 70
length of query: 247
length of database: 3,745,706
effective HSP length: 15
effective length of query: 232
effective length of database: 3,630,671
effective search space: 842315672
effective search space used: 842315672
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)