BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCG11e12.yg.2.1
         (636 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AW698351.1|AW698351  g32 glandular-haired subtracted cDNA...    48   8e-006
gb|AW698352.1|AW698352  g34 glandular-haired subtracted cDNA...    42   5e-004
gb|AW698341.1|AW698341  G143 glandular-haired subtracted cDN...    38   0.007
gb|AW698345.1|AW698345  G73 glandular-haired subtracted cDNA...    38   0.007
gb|AW698347.1|AW698347  G78 glandular-haired subtracted cDNA...    38   0.007
gb|AW698350.1|AW698350  g29 glandular-haired subtracted cDNA...    38   0.007
gb|AW698672.1|AW698672  R103 non-glandular-haired subtracted...    38   0.007
gb|AW698675.1|AW698675  R10 non-glandular-haired subtracted ...    38   0.007
gb|AW698681.1|AW698681  R11 non-glandular-haired subtracted ...    38   0.007
gb|AW698683.1|AW698683  R121 non-glandular-haired subtracted...    38   0.007
gb|AW698685.1|AW698685  R125 non-glandular-haired subtracted...    38   0.007
gb|AW698688.1|AW698688  R12 non-glandular-haired subtracted ...    38   0.007
gb|AW698697.1|AW698697  R145 non-glandular-haired subtracted...    38   0.007
gb|AW698698.1|AW698698  R146 non-glandular-haired subtracted...    38   0.007
gb|AW698715.1|AW698715  R93 non-glandular-haired subtracted ...    38   0.007
gb|AW698716.1|AW698716  R95 non-glandular-haired subtracted ...    38   0.007
gb|AW698886.1|AW698886  r151 non-glandular-haired subtracted...    38   0.007
gb|AW698901.1|AW698901  r97 non-glandular-haired subtracted ...    38   0.007
gb|AW698680.1|AW698680  R116 non-glandular-haired subtracted...    36   0.029
gb|AW698338.1|AW698338  G1 glandular-haired subtracted cDNA ...    34   0.11 
gb|AW698354.1|AW698354  g40 glandular-haired subtracted cDNA...    34   0.11 
gb|AW698355.1|AW698355  g43 glandular-haired subtracted cDNA...    34   0.11 
gb|AW698673.1|AW698673  R101 non-glandular-haired subtracted...    34   0.11 
gb|AW698678.1|AW698678  R113 non-glandular-haired subtracted...    34   0.11 
gb|AW698679.1|AW698679  R115 non-glandular-haired subtracted...    34   0.11 
gb|AW698699.1|AW698699  R149 non-glandular-haired subtracted...    34   0.11 
gb|AW698711.1|AW698711  R89 non-glandular-haired subtracted ...    34   0.11 
gb|AW698717.1|AW698717  R96 non-glandular-haired subtracted ...    34   0.11 
gb|AW698718.1|AW698718  R98 non-glandular-haired subtracted ...    34   0.11 
gb|AW698895.1|AW698895  r3 non-glandular-haired subtracted c...    34   0.11 
gb|CO515135.1|CO515135  s13dSG40G0500040_399135 Glandular tr...    34   0.11 
gb|CO515503.1|CO515503  s13dSG52D0800074_418065 Glandular tr...    34   0.11 
gb|AJ888497.1|AJ888497  AJ888497 Medicago sativa subsp. x va...    34   0.11 
gb|AY196987.1|  Medicago sativa retrotransposon MIRE1, compl...    34   0.11 
gb|DQ122784.1|  Medicago sativa clone C43 putative splicing ...    34   0.11 
gb|AW698346.1|AW698346  G75 glandular-haired subtracted cDNA...    32   0.45 
gb|AW698687.1|AW698687  R128 non-glandular-haired subtracted...    32   0.45 
gb|AW698777.1|AW698777  r361 non-glandular-haired subtracted...    32   0.45 
gb|AW698884.1|AW698884  r147 non-glandular-haired subtracted...    32   0.45 
gb|AW698894.1|AW698894  r167 non-glandular-haired subtracted...    32   0.45 
gb|CO512258.1|CO512258  s13dSG03H0200016_114030 Glandular tr...    32   0.45 
gb|CO514936.1|CO514936  s13dSG63C0300022_397377 Glandular tr...    32   0.45 
gb|CO515154.1|CO515154  s13dSG62A0300021_399173 Glandular tr...    32   0.45 
gb|CO516890.1|CO516890  s13dSG58B0400029_468326 Glandular tr...    32   0.45 
gb|CO517217.1|CO517217  s13dSG32B0800073_486030 Glandular tr...    32   0.45 
gb|AJ888498.1|AJ888498  AJ888498 Medicago sativa subsp. x va...    32   0.45 
gb|AY468362.2|  Medicago sativa sucrose-phosphate synthase g...    32   0.45 
>gb|AW698351.1|AW698351 g32 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 327

 Score = 48.1 bits (24), Expect = 8e-006
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 612 taaaagtacctgcccgggcggccg 635
           ||||||||||||||||||||||||
Sbjct: 286 taaaagtacctgcccgggcggccg 309
>gb|AW698352.1|AW698352 g34 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 365

 Score = 42.1 bits (21), Expect = 5e-004
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 615 aagtacctgcccgggcggccg 635
           |||||||||||||||||||||
Sbjct: 25  aagtacctgcccgggcggccg 5
>gb|AW698341.1|AW698341 G143 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 264

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 241 gtacctgcccgggcggccg 259
>gb|AW698345.1|AW698345 G73 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 407

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 553

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 112 gtacctgcccgggcggccg 94
>gb|AW698350.1|AW698350 g29 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 274

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 251 gtacctgcccgggcggccg 269
>gb|AW698672.1|AW698672 R103 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 251

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698675.1|AW698675 R10 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 289

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698681.1|AW698681 R11 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 168

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698683.1|AW698683 R121 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 527

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698685.1|AW698685 R125 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 393

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 370 gtacctgcccgggcggccg 388
>gb|AW698688.1|AW698688 R12 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 356

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 23  gtacctgcccgggcggccg 5
>gb|AW698697.1|AW698697 R145 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 354

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698698.1|AW698698 R146 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 326

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 23  gtacctgcccgggcggccg 5
>gb|AW698715.1|AW698715 R93 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 440

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698716.1|AW698716 R95 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 434

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 23  gtacctgcccgggcggccg 5
>gb|AW698886.1|AW698886 r151 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 129

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 24  gtacctgcccgggcggccg 6
>gb|AW698901.1|AW698901 r97 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 212

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 617 gtacctgcccgggcggccg 635
           |||||||||||||||||||
Sbjct: 189 gtacctgcccgggcggccg 207
>gb|AW698680.1|AW698680 R116 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 290

 Score = 36.2 bits (18), Expect = 0.029
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 615 aagtacctgcccgggcgg 632
           ||||||||||||||||||
Sbjct: 266 aagtacctgcccgggcgg 283
>gb|AW698338.1|AW698338 G1 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 483

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 21  acctgcccgggcggccg 5
>gb|AW698354.1|AW698354 g40 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 307

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 615 aagtacctgcccgggcggccg 635
           |||||||||||||||| ||||
Sbjct: 259 aagtacctgcccgggctgccg 279
>gb|AW698355.1|AW698355 g43 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 168

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 616 agtacctgcccgggcgg 632
           |||||||||||||||||
Sbjct: 152 agtacctgcccgggcgg 168
>gb|AW698673.1|AW698673 R101 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 481

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 612 taaaagtacctgcccgggcgg 632
           ||||| |||||||||||||||
Sbjct: 461 taaaaatacctgcccgggcgg 481
>gb|AW698678.1|AW698678 R113 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 252

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 231 acctgcccgggcggccg 247
>gb|AW698679.1|AW698679 R115 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 418

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 22  acctgcccgggcggccg 6
>gb|AW698699.1|AW698699 R149 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 275

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 22  acctgcccgggcggccg 6
>gb|AW698711.1|AW698711 R89 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 343

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 322 acctgcccgggcggccg 338
>gb|AW698717.1|AW698717 R96 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 384

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 363 acctgcccgggcggccg 379
>gb|AW698718.1|AW698718 R98 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 330

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 309 acctgcccgggcggccg 325
>gb|AW698895.1|AW698895 r3 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 370

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 349 acctgcccgggcggccg 365
>gb|CO515135.1|CO515135 s13dSG40G0500040_399135 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 330

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 253 tgctgttgtttcaaaga 269
           |||||||||||||||||
Sbjct: 195 tgctgttgtttcaaaga 211
>gb|CO515503.1|CO515503 s13dSG52D0800074_418065 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 431

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 253 tgctgttgtttcaaaga 269
           |||||||||||||||||
Sbjct: 143 tgctgttgtttcaaaga 159
>gb|AJ888497.1|AJ888497 AJ888497 Medicago sativa subsp. x varia 4-day-old Medicago sativa
           subsp. x varia cDNA, mRNA sequence
          Length = 561

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 619 acctgcccgggcggccg 635
           |||||||||||||||||
Sbjct: 538 acctgcccgggcggccg 554
>gb|AY196987.1| Medicago sativa retrotransposon MIRE1, complete sequence
          Length = 13561

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 90   acaagaaaacagcttca 106
            |||||||||||||||||
Sbjct: 1559 acaagaaaacagcttca 1575
>gb|DQ122784.1| Medicago sativa clone C43 putative splicing factor Prp8 mRNA,
           partial cds
          Length = 552

 Score = 34.2 bits (17), Expect = 0.11
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 615 aagtacctgcccgggcggccg 635
           ||||||||| |||||||||||
Sbjct: 477 aagtacctggccgggcggccg 497
>gb|AW698346.1|AW698346 G75 glandular-haired subtracted cDNA library Medicago sativa cDNA,
           mRNA sequence
          Length = 225

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 617 gtacctgcccgggcgg 632
           ||||||||||||||||
Sbjct: 210 gtacctgcccgggcgg 225
>gb|AW698687.1|AW698687 R128 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 477

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 619 acctgcccgggcggcc 634
           ||||||||||||||||
Sbjct: 455 acctgcccgggcggcc 470
>gb|AW698777.1|AW698777 r361 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 340

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 620 cctgcccgggcggccg 635
           ||||||||||||||||
Sbjct: 312 cctgcccgggcggccg 327
>gb|AW698884.1|AW698884 r147 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 178

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 617 gtacctgcccgggcgg 632
           ||||||||||||||||
Sbjct: 25  gtacctgcccgggcgg 10
>gb|AW698894.1|AW698894 r167 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 262

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 619 acctgcccgggcggcc 634
           ||||||||||||||||
Sbjct: 23  acctgcccgggcggcc 8
>gb|CO512258.1|CO512258 s13dSG03H0200016_114030 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 566

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 357 ttgatgggattgttca 372
           ||||||||||||||||
Sbjct: 463 ttgatgggattgttca 478
>gb|CO514936.1|CO514936 s13dSG63C0300022_397377 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 494

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 357 ttgatgggattgttca 372
           ||||||||||||||||
Sbjct: 462 ttgatgggattgttca 477
>gb|CO515154.1|CO515154 s13dSG62A0300021_399173 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 489

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 357 ttgatgggattgttca 372
           ||||||||||||||||
Sbjct: 472 ttgatgggattgttca 487
>gb|CO516890.1|CO516890 s13dSG58B0400029_468326 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 340

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 460 aaaagaaaagtggaacaaat 479
           ||||| ||||||||||||||
Sbjct: 313 aaaaggaaagtggaacaaat 332
>gb|CO517217.1|CO517217 s13dSG32B0800073_486030 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 617

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 550 tgtggatcttgtcatt 565
           ||||||||||||||||
Sbjct: 237 tgtggatcttgtcatt 222
>gb|AJ888498.1|AJ888498 AJ888498 Medicago sativa subsp. x varia 4-day-old Medicago sativa
           subsp. x varia cDNA, mRNA sequence
          Length = 530

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 617 gtacctgcccgggcgg 632
           ||||||||||||||||
Sbjct: 507 gtacctgcccgggcgg 522
>gb|AY468362.2| Medicago sativa sucrose-phosphate synthase gene, promoter region and
            complete cds
          Length = 8933

 Score = 32.2 bits (16), Expect = 0.45
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                                
Query: 131  attttaaattatgatttttc 150
            |||||||||||| |||||||
Sbjct: 1953 attttaaattattatttttc 1934
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1953
Number of Sequences: 7669
Number of extensions: 1953
Number of successful extensions: 548
Number of sequences better than  0.5: 48
Number of HSP's better than  0.5 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 499
Number of HSP's gapped (non-prelim): 49
length of query: 636
length of database: 3,745,706
effective HSP length: 16
effective length of query: 620
effective length of database: 3,623,002
effective search space: 2246261240
effective search space used: 2246261240
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)