BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.36
(834 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X13674.1|MSHIS3C1 Medicago sativa mRNA for histone H3 c... 182 3e-046
emb|X13673.1|MSHIS311 Medicago sativa H3 histone gene ALH3-1.1 174 6e-044
emb|X13675.1|MSHIS3C2 Medicago sativa mRNA for histone H3 c... 174 6e-044
gb|M35867.1|ALFHISH3A Alfalfa histone H3 (H3-1.1) gene, com... 167 2e-041
gb|CO516855.1|CO516855 s13dSG98E1100085_447038 Glandular tr... 123 2e-028
gb|U09465.1|MSU09465 Medicago sativa clone pH3c131 histone ... 123 2e-028
gb|CO516992.1|CO516992 s13dSG81F0300027_468530 Glandular tr... 115 5e-026
gb|U09460.1|MSU09460 Medicago sativa clone pH3c110 histone ... 107 1e-023
gb|U09461.1|MSU09461 Medicago sativa clone pH3c118 histone ... 107 1e-023
gb|U09464.1|MSU09464 Medicago sativa clone pH3c130 histone ... 107 1e-023
gb|U09459.1|MSU09459 Medicago sativa cultivar Chief histone... 105 5e-023
gb|CO514105.1|CO514105 s13dSG75D0200014_156872 Glandular tr... 100 3e-021
gb|CO516875.1|CO516875 s13dSG98H1100094_447078 Glandular tr... 100 3e-021
gb|CO516695.1|CO516695 s13dSG74C0500035_446718 Glandular tr... 96 5e-020
gb|CO517274.1|CO517274 s13dSG32H0900080_486144 Glandular tr... 96 5e-020
emb|X13676.1|MSHIS3C3 Medicago sativa mRNA for histone H3 c... 96 5e-020
gb|U09463.1|MSU09463 Medicago sativa Regen S clone pH3c127 ... 96 5e-020
gb|U09462.1|MSU09462 Medicago sativa clone pH3c126 histone ... 88 1e-017
emb|X13677.1|MSHIS3C4 Medicago sativa mRNA for histone H3 C... 84 2e-016
gb|CO513649.1|CO513649 s13dSG17C0300018_140080 Glandular tr... 58 1e-008
gb|CO516848.1|CO516848 s13dSG98E0300019_447024 Glandular tr... 58 1e-008
gb|U09458.1|MSU09458 Medicago sativa cultivar Chief histone... 58 1e-008
gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA... 54 2e-007
gb|CO515400.1|CO515400 s13dSG49H1000092_417859 Glandular tr... 54 2e-007
gb|AW698444.1|AW698444 g394 glandular-haired subtracted cDN... 48 1e-005
gb|CO514111.1|CO514111 s13dSG75D0800062_156884 Glandular tr... 44 2e-004
gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted... 34 0.15
>emb|X13674.1|MSHIS3C1 Medicago sativa mRNA for histone H3 clone pH3c-1
Length = 618
Score = 182 bits (92), Expect = 3e-046
Identities = 326/404 (80%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||| ||||| ||||| ||||| ||||| |||||||| ||||| || || | |||||
Sbjct: 64 atggcacgtaccaagcaaaccgctcgcaaatccaccggtggcaaagctccaaggaagcaa 123
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||| || || || | || || || ||| | |||||||| |||||||| || |||
Sbjct: 124 ctcgccacaaaagccgctcgcaaatctgctccggccaccggcggagtgaagaaacctcac 183
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| | |||||| || || || || || || |||||||||||||||||||||||||| |||
Sbjct: 184 cgtttcaggccaggaaccgtcgctctccgtgagatccgcaagtaccagaagagcactgag 243
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| || ||||| || | ||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 244 ctcctcatccgcaaactccccttccagcgtcttgtccgtgagatcgctcaggatttcaag 303
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|| ||||| || ||||||||| |||||| ||| || || ||||| |||||||| ||
Sbjct: 304 actgatctccgtttccagagctccgccgtgtcggcactgcaagaagcggccgaggcttat 363
Query: 431 ctcgtcggcctgttcgaggacaccaacctctgcgccatccacgcaaagcgcgtcaccatc 490
|||||||| || || ||||| || || ||||||||||| || || ||||| ||||| |||
Sbjct: 364 ctcgtcggtctctttgaggatactaatctctgcgccattcatgctaagcgtgtcactatc 423
Query: 491 atgcccaaagacatccagctcgcccgccgcatccgcggcgagcg 534
|||||||| || ||||||||||| | || ||||| ||||||||
Sbjct: 424 atgcccaaggatatccagctcgctaggcgtatccgtggcgagcg 467
>emb|X13673.1|MSHIS311 Medicago sativa H3 histone gene ALH3-1.1
Length = 1089
Score = 174 bits (88), Expect = 6e-044
Identities = 325/404 (80%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||| ||||| ||||| ||||| ||||| |||||||| ||||| || || | |||||
Sbjct: 285 atggcacgtaccaagcaaaccgctcgcaaatccaccggtggcaaagctccaaggaagcaa 344
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||| || || || | || || || ||| | |||||||| |||||||| || |||
Sbjct: 345 ctcgccacaaaagccgctcgcaaatctgctccggccaccggcggagtgaagaaacctcac 404
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| | |||||| || || || || || || |||||||||||||||||||||||||| |||
Sbjct: 405 cgtttcaggccaggaaccgtcgctctccgtgagatccgcaagtaccagaagagcactgag 464
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| || ||||| || | ||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 465 ctcctcatccgcaaactccccttccagcgtcttgtccgtgagatcgctcaggatttcaag 524
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|| ||||| || ||||||||| |||||| ||| | || ||||| |||||||| ||
Sbjct: 525 actgatctccgtttccagagctccgccgtgtcggctttgcaagaagcggccgaggcttat 584
Query: 431 ctcgtcggcctgttcgaggacaccaacctctgcgccatccacgcaaagcgcgtcaccatc 490
|||||||| || || ||||| || |||||||||||||| || || ||||| ||||| |||
Sbjct: 585 ctcgtcggtctctttgaggatactaacctctgcgccattcatgctaagcgtgtcactatc 644
Query: 491 atgcccaaagacatccagctcgcccgccgcatccgcggcgagcg 534
||||| || || ||||||||||| | || ||||| ||||||||
Sbjct: 645 atgcctaaggatatccagctcgctaggcgtatccgtggcgagcg 688
>emb|X13675.1|MSHIS3C2 Medicago sativa mRNA for histone H3 clone pH3c-3
Length = 513
Score = 174 bits (88), Expect = 6e-044
Identities = 253/308 (82%)
Strand = Plus / Plus
Query: 227 accggcggcgtgaagaagccccacaggtacaggcccgggacggtggcgctgcgcgagatc 286
|||||||| |||||||| || ||| | | |||||| || || || || || || ||||||
Sbjct: 58 accggcggagtgaagaaacctcaccgtttcaggcctggaaccgtcgctctccgtgagatc 117
Query: 287 cgcaagtaccagaagagcacggagctgctgatccggaagttgcccttccagcgcctggtc 346
|||||||||||||||||||| ||||| || ||||| || | ||||||||||| || |||
Sbjct: 118 cgcaagtaccagaagagcactgagctcctcatccgcaaactccccttccagcgtcttgtc 177
Query: 347 cgtgagatcgctcaggacttcaagacggatctgcggttccagagccacgccgtcctggcc 406
||||||||||||||||| |||||||| ||||| || ||||||||| |||||| |||
Sbjct: 178 cgtgagatcgctcaggatttcaagactgatctccgtttccagagctccgccgtgtcggca 237
Query: 407 ctccaggaagccgccgaggcctacctcgtcggcctgttcgaggacaccaacctctgcgcc 466
|| || ||||| |||||||| || |||||||| || || ||||| || ||||||||||||
Sbjct: 238 ctgcaagaagcggccgaggcttatctcgtcggtctctttgaggatactaacctctgcgcc 297
Query: 467 atccacgcaaagcgcgtcaccatcatgcccaaagacatccagctcgcccgccgcatccgc 526
|| || || ||||| ||||| |||||||| || || ||||||||||| | || |||||
Sbjct: 298 attcatgccaagcgtgtcactatcatgcctaaggatatccagctcgctaggcgtatccgt 357
Query: 527 ggcgagcg 534
||||||||
Sbjct: 358 ggcgagcg 365
>gb|M35867.1|ALFHISH3A Alfalfa histone H3 (H3-1.1) gene, complete cds
Length = 1089
Score = 167 bits (84), Expect = 2e-041
Identities = 324/404 (80%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||| ||||| ||||| ||||| ||||| |||||||| ||||| || || | |||||
Sbjct: 285 atggcacgtaccaagcaaaccgctcgcaaatccaccggtggcaaagctccaaggaagcaa 344
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||| || || || | || || || ||| | |||||||| |||||||| || |||
Sbjct: 345 ctcgccacaaaagccgctcgcaaatctgctccggccaccggcggagtgaagaaacctcac 404
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| | |||||| || || || || || || |||||||||||||||||||||||||| |||
Sbjct: 405 cgtttcaggccaggaaccgtcgctctccgtgagatccgcaagtaccagaagagcactgag 464
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| || ||||| || | ||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 465 ctcctcatccgcaaactccccttccagcgtcttgtccgtgagatcgctcaggatttcaag 524
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|| ||||| || ||||||||| || ||| ||| | || ||||| |||||||| ||
Sbjct: 525 actgatctccgtttccagagctccgtcgtgtcggctttgcaagaagcggccgaggcttat 584
Query: 431 ctcgtcggcctgttcgaggacaccaacctctgcgccatccacgcaaagcgcgtcaccatc 490
|||||||| || || ||||| || |||||||||||||| || || ||||| ||||| |||
Sbjct: 585 ctcgtcggtctctttgaggatactaacctctgcgccattcatgctaagcgtgtcactatc 644
Query: 491 atgcccaaagacatccagctcgcccgccgcatccgcggcgagcg 534
||||| || || ||||||||||| | || ||||| ||||||||
Sbjct: 645 atgcctaaggatatccagctcgctaggcgtatccgtggcgagcg 688
>gb|CO516855.1|CO516855 s13dSG98E1100085_447038 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 469
Score = 123 bits (62), Expect = 2e-028
Identities = 260/326 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| |||||||| || ||||| || | ||||||
Sbjct: 73 atggctcgtaccaagcaaaccgctcgcaaatccaccggtggtaaggctccaaggaagcag 132
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||||||||| || ||||| || || || || || || || || ||||| || |||
Sbjct: 133 ctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaacctcac 192
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| ||| | || || || || || || || |||||||| |||||||||||||| || |||
Sbjct: 193 cgataccgccctggaactgtcgctcttcgtgagatccgtaagtaccagaagagtaccgag 252
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || || ||||| || |||||||| || ||||| || ||||||
Sbjct: 253 cttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagatttcaag 312
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
||||||||| | ||||||||||| || || || || || |||||||| || ||||| |||
Sbjct: 313 acggatctgagattccagagccatgcagttcttgcacttcaggaagcagctgaggcttac 372
Query: 431 ctcgtcggcctgttcgaggacaccaa 456
|| || || |||| |||||||||||
Sbjct: 373 ctggttggattgtttgaggacaccaa 398
Score = 50.1 bits (25), Expect = 3e-006
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| |||||||| || ||||| || | ||||||
Sbjct: 73 atggctcgtaccaagcaaaccgctcgcaaatccaccggtggtaaggctccaaggaagcag 132
Query: 88 ctcgc 92
|||||
Sbjct: 133 ctcgc 137
>gb|U09465.1|MSU09465 Medicago sativa clone pH3c131 histone H3.2 mRNA, complete cds
Length = 617
Score = 123 bits (62), Expect = 2e-028
Identities = 260/326 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| |||||||| || ||||| || | ||||||
Sbjct: 18 atggctcgtaccaagcaaaccgctcgcaaatccaccggtggtaaggctccaaggaagcag 77
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||||||||| || ||||| || || || || || || || || ||||| || |||
Sbjct: 78 ctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaacctcac 137
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| ||| | || || || || || || || |||||||| |||||||||||||| || |||
Sbjct: 138 cgataccgccctggaactgtcgctcttcgtgagatccgtaagtaccagaagagtaccgag 197
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || || ||||| || |||||||| |||||||| || ||||||
Sbjct: 198 cttttgatccgcaagcttccatttcagcgtcttgtccgtgaaatcgctcaagatttcaag 257
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|||||| || | ||||||||||| || || || || || |||||||| || ||||| |||
Sbjct: 258 acggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgaggcttac 317
Query: 431 ctcgtcggcctgttcgaggacaccaa 456
|| || || |||| |||||||||||
Sbjct: 318 ctggttggattgtttgaggacaccaa 343
Score = 50.1 bits (25), Expect = 3e-006
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| |||||||| || ||||| || | ||||||
Sbjct: 18 atggctcgtaccaagcaaaccgctcgcaaatccaccggtggtaaggctccaaggaagcag 77
Query: 88 ctcgc 92
|||||
Sbjct: 78 ctcgc 82
>gb|CO516992.1|CO516992 s13dSG81F0300027_468530 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 496
Score = 115 bits (58), Expect = 5e-026
Identities = 259/326 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| |||||||| || ||||| || | ||||||
Sbjct: 90 atggctcgtaccaagcaaaccgctcgcaaatccaccggtggtaaggctccaaggaagcag 149
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||||||||| || ||||| || || || || || || || || ||||| || |||
Sbjct: 150 ctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaacctcac 209
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| ||| | || || || || || || || |||||||| |||||||||||||| || |||
Sbjct: 210 cgataccgccctggaactgtcgctcttcgtgagatccgtaagtaccagaagagtaccgag 269
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || || ||||| || |||||||| || ||||| || ||||||
Sbjct: 270 cttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagatttcaag 329
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|||||| || | ||||||||||| || || || || || |||||||| || ||||| |||
Sbjct: 330 acggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgaggcttac 389
Query: 431 ctcgtcggcctgttcgaggacaccaa 456
|| || || |||| |||||||||||
Sbjct: 390 ctggttggattgtttgaggacaccaa 415
Score = 50.1 bits (25), Expect = 3e-006
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| |||||||| || ||||| || | ||||||
Sbjct: 90 atggctcgtaccaagcaaaccgctcgcaaatccaccggtggtaaggctccaaggaagcag 149
Query: 88 ctcgc 92
|||||
Sbjct: 150 ctcgc 154
>gb|U09460.1|MSU09460 Medicago sativa clone pH3c110 histone H3.2 mRNA, complete cds
Length = 693
Score = 107 bits (54), Expect = 1e-023
Identities = 258/326 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 56 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 115
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||||||||| || ||||| || || || || || || || || ||||| || |||
Sbjct: 116 ctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaacctcac 175
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| ||| | || || || || || || || |||||||| |||||||||||||| || |||
Sbjct: 176 cgataccgccctggaaccgtcgctcttcgtgagatccgtaagtaccagaagagtaccgag 235
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || || ||||| || |||||||| || ||||| || ||||||
Sbjct: 236 cttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagatttcaag 295
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|||||| || | ||||||||||| || || || || || |||||||| || ||||| |||
Sbjct: 296 acggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgaggcttac 355
Query: 431 ctcgtcggcctgttcgaggacaccaa 456
|| || || |||| |||||||||||
Sbjct: 356 ctggttggattgtttgaggacaccaa 381
Score = 42.1 bits (21), Expect = 6e-004
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 56 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 115
Query: 88 ctcgc 92
|||||
Sbjct: 116 ctcgc 120
>gb|U09461.1|MSU09461 Medicago sativa clone pH3c118 histone H3.2 mRNA, complete cds
Length = 679
Score = 107 bits (54), Expect = 1e-023
Identities = 258/326 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 42 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 101
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||||||||| || ||||| || || || || || || || || ||||| || |||
Sbjct: 102 ctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaacctcac 161
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| ||| | || || || || || || || |||||||| |||||||||||||| || |||
Sbjct: 162 cgataccgccctggaaccgtcgctcttcgtgagatccgtaagtaccagaagagtaccgag 221
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || || ||||| || |||||||| || ||||| || ||||||
Sbjct: 222 cttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagatttcaag 281
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|||||| || | ||||||||||| || || || || || |||||||| || ||||| |||
Sbjct: 282 acggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgaggcttac 341
Query: 431 ctcgtcggcctgttcgaggacaccaa 456
|| || || |||| |||||||||||
Sbjct: 342 ctggttggattgtttgaggacaccaa 367
Score = 42.1 bits (21), Expect = 6e-004
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 42 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 101
Query: 88 ctcgc 92
|||||
Sbjct: 102 ctcgc 106
>gb|U09464.1|MSU09464 Medicago sativa clone pH3c130 histone H3.2 mRNA, complete cds
Length = 660
Score = 107 bits (54), Expect = 1e-023
Identities = 258/326 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 18 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 77
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||||||||| || ||||| || || || || || || || || ||||| || |||
Sbjct: 78 ctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaacctcac 137
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| ||| | || || || || || || || |||||||| |||||||||||||| || |||
Sbjct: 138 cgataccgccctggaaccgtcgctcttcgtgagatccgtaagtaccagaagagtaccgag 197
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || || ||||| || |||||||| || ||||| || ||||||
Sbjct: 198 cttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagatttcaag 257
Query: 371 acggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcctac 430
|||||| || | ||||||||||| || || || || || |||||||| || ||||| |||
Sbjct: 258 acggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgaggcttac 317
Query: 431 ctcgtcggcctgttcgaggacaccaa 456
|| || || |||| |||||||||||
Sbjct: 318 ctggttggattgtttgaggacaccaa 343
Score = 42.1 bits (21), Expect = 6e-004
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 18 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 77
Query: 88 ctcgc 92
|||||
Sbjct: 78 ctcgc 82
>gb|U09459.1|MSU09459 Medicago sativa cultivar Chief histone H3.1 gene, 5' region and
complete cds
Length = 922
Score = 105 bits (53), Expect = 5e-023
Identities = 209/261 (80%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| || || || ||||||||||| |||||||| || || ||||||
Sbjct: 295 atggctcgtaccaagcaaacagctcgtaagtccaccggcggcaaggctccccggaagcag 354
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
|||||||| ||||| || | || || || ||| ||||||| || ||||||||||| |||
Sbjct: 355 ctcgccacaaaggccgctcgaaaatcagctccggcgaccggaggagtgaagaagccacac 414
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
|| | ||| || || || || || || | |||||||| ||||| ||||||||||| |||
Sbjct: 415 agattcagacctggaacagttgctttgagagagatccgtaagtatcagaagagcactgag 474
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| || ||||| || | || ||||| || || || ||||| |||||||| || ||||||
Sbjct: 475 cttctcatccgtaaacttccattccaacgtcttgttcgtgaaatcgctcaagatttcaag 534
Query: 371 acggatctgcggttccagagc 391
|| |||||| | |||||||||
Sbjct: 535 acagatctgagattccagagc 555
Score = 58.0 bits (29), Expect = 1e-008
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| || || || ||||||||||| |||||||| || || ||||||
Sbjct: 295 atggctcgtaccaagcaaacagctcgtaagtccaccggcggcaaggctccccggaagcag 354
Query: 88 ctcgc 92
|||||
Sbjct: 355 ctcgc 359
>gb|CO514105.1|CO514105 s13dSG75D0200014_156872 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 599
Score = 99.6 bits (50), Expect = 3e-021
Identities = 209/262 (79%)
Strand = Plus / Plus
Query: 130 gatggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 189
|||||| ||||| ||||| || || |||||||||||||| |||||||| || || |||||
Sbjct: 73 gatggcacgtaccaagcaaacagctcgcaagtccaccggcggcaaggctccccggaagca 132
Query: 190 gctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagcccca 249
||||||||| ||||| || |||| || || ||| ||||||| || ||||||||||| ||
Sbjct: 133 gctcgccacaaaggccgctcggaaatcagctccggcgaccggaggagtgaagaagccaca 192
Query: 250 caggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacgga 309
||| | ||| || || || || || || | ||||| || ||||| ||||||||||| ||
Sbjct: 193 cagattcagacctggaacagttgctttgagagagattcgtaagtatcagaagagcactga 252
Query: 310 gctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaa 369
||| || ||||| || | || ||||| || || || ||||| |||||||| || |||||
Sbjct: 253 gcttctcatccgtaaacttccattccaacgtcttgttcgtgaaatcgctcaagatttcaa 312
Query: 370 gacggatctgcggttccagagc 391
||| ||||| | |||||||||
Sbjct: 313 gacagatcttagattccagagc 334
Score = 60.0 bits (30), Expect = 3e-009
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 27 gatggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 86
|||||| ||||| ||||| || || |||||||||||||| |||||||| || || |||||
Sbjct: 73 gatggcacgtaccaagcaaacagctcgcaagtccaccggcggcaaggctccccggaagca 132
Query: 87 gctcgc 92
||||||
Sbjct: 133 gctcgc 138
>gb|CO516875.1|CO516875 s13dSG98H1100094_447078 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 565
Score = 99.6 bits (50), Expect = 3e-021
Identities = 209/262 (79%)
Strand = Plus / Plus
Query: 130 gatggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 189
|||||| ||||| ||||| || || |||||||||||||| |||||||| || || |||||
Sbjct: 68 gatggcacgtaccaagcaaacagctcgcaagtccaccggcggcaaggctccccggaagca 127
Query: 190 gctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagcccca 249
||||||||| ||||| || |||| || || ||| ||||||| || ||||||||||| ||
Sbjct: 128 gctcgccacaaaggccgctcggaaatcagctccggcgaccggaggagtgaagaagccaca 187
Query: 250 caggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacgga 309
||| | ||| || || || || || || | ||||| || ||||| ||||||||||| ||
Sbjct: 188 cagattcagacctggaacagttgctttgagagagattcgtaagtatcagaagagcactga 247
Query: 310 gctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaa 369
||| || ||||| || | || ||||| || || || ||||| |||||||| || |||||
Sbjct: 248 gcttctcatccgtaaacttccattccaacgtcttgttcgtgaaatcgctcaagatttcaa 307
Query: 370 gacggatctgcggttccagagc 391
||| ||||| | |||||||||
Sbjct: 308 gacagatcttagattccagagc 329
Score = 60.0 bits (30), Expect = 3e-009
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 27 gatggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 86
|||||| ||||| ||||| || || |||||||||||||| |||||||| || || |||||
Sbjct: 68 gatggcacgtaccaagcaaacagctcgcaagtccaccggcggcaaggctccccggaagca 127
Query: 87 gctcgc 92
||||||
Sbjct: 128 gctcgc 133
>gb|CO516695.1|CO516695 s13dSG74C0500035_446718 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 434
Score = 95.6 bits (48), Expect = 5e-020
Identities = 207/260 (79%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||||||||| || || ||||| |||||||| ||||| || || | |||||
Sbjct: 92 atggctcgtacgaagcaaactgctcgcaaatccaccggcggcaaagcaccaaggaagcaa 151
Query: 191 ctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaagccccac 250
||||||||||| || || ||||| || || || || |||||||| ||||||||||| ||
Sbjct: 152 ctcgccaccaaagctgcaaggaaatctgctccaaccaccggcggagtgaagaagccacat 211
Query: 251 aggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagcacggag 310
| || | || || || || || || || |||||||| ||||| |||||||| || |||
Sbjct: 212 cgttatcgtcctggaaccgttgctcttcgtgagatccgtaagtatcagaagagtaccgag 271
Query: 311 ctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaag 370
|| ||||||| ||| | || |||||||| || || ||||| || |||||||| |||||
Sbjct: 272 cttttgatccgtaagcttccattccagcgtcttgttcgtgaaattgctcaggatttcaaa 331
Query: 371 acggatctgcggttccagag 390
||||||||| |||| |||||
Sbjct: 332 acggatctgaggtttcagag 351
Score = 48.1 bits (24), Expect = 1e-005
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaa 71
||||||||||||||||| || || ||||| |||||||| |||||
Sbjct: 92 atggctcgtacgaagcaaactgctcgcaaatccaccggcggcaa 135
>gb|CO517274.1|CO517274 s13dSG32H0900080_486144 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 576
Score = 95.6 bits (48), Expect = 5e-020
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 281 gagatccgcaagtaccagaagagcacggagctgctgatccggaagttgcccttccagcgc 340
|||||||| |||||||||||||| || ||||| ||||||| ||| | || || |||||
Sbjct: 575 gagatccgtaagtaccagaagagtaccgagcttttgatccgcaagcttccatttcagcgt 516
Query: 341 ctggtccgtgagatcgctcaggacttcaagacggatctgcggttccagagccacgccgtc 400
|| |||||||| || ||||| || ||||||||||||||| | ||||||||||| || ||
Sbjct: 515 cttgtccgtgaaattgctcaagatttcaagacggatctgagattccagagccatgcagtt 456
Query: 401 ctggccctccaggaagccgccgaggcctacctcgtcggcctgttcgaggacaccaa 456
|| || || |||||||| || ||||| ||||| || || |||| |||||||||||
Sbjct: 455 cttgcacttcaggaagcagctgaggcttacctggttggattgtttgaggacaccaa 400
>emb|X13676.1|MSHIS3C3 Medicago sativa mRNA for histone H3 clone pH3c-11
Length = 579
Score = 95.6 bits (48), Expect = 5e-020
Identities = 216/272 (79%)
Strand = Plus / Plus
Query: 185 aagcagctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaag 244
|||||||||||||||||||| || ||||| || || || || || || || || |||||
Sbjct: 6 aagcagctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaa 65
Query: 245 ccccacaggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagc 304
|| ||| | ||| | || || || || || || || |||||||| ||||||||||||||
Sbjct: 66 cctcaccgataccgccctggaactgtcgctcttcgtgagatccgtaagtaccagaagagt 125
Query: 305 acggagctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggac 364
|| ||||| ||||||| ||| | || || ||||| || |||||||| || ||||| ||
Sbjct: 126 accgagcttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagat 185
Query: 365 ttcaagacggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgag 424
||||||||||||||| | ||||||||||| || || || || || |||||||| || |||
Sbjct: 186 ttcaagacggatctgagattccagagccatgcagttcttgcacttcaggaagcagctgag 245
Query: 425 gcctacctcgtcggcctgttcgaggacaccaa 456
|| ||||| || || |||| |||||||||||
Sbjct: 246 gcttacctggttggattgtttgaggacaccaa 277
>gb|U09463.1|MSU09463 Medicago sativa Regen S clone pH3c127 histone H3.2 mRNA, partial
cds
Length = 595
Score = 95.6 bits (48), Expect = 5e-020
Identities = 216/272 (79%)
Strand = Plus / Plus
Query: 185 aagcagctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaag 244
|||||||||||||||||||| || ||||| || || || || || || || || |||||
Sbjct: 19 aagcagctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaa 78
Query: 245 ccccacaggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagc 304
|| ||| | ||| | || || || || || || || |||||||| ||||||||||||||
Sbjct: 79 cctcaccgataccgccctggaactgtcgctcttcgtgagatccgtaagtaccagaagagt 138
Query: 305 acggagctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggac 364
|| ||||| ||||||| ||| | || || ||||| || |||||||| |||||||| ||
Sbjct: 139 accgagcttttgatccgcaagcttccatttcagcgtcttgtccgtgaaatcgctcaagat 198
Query: 365 ttcaagacggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgag 424
|||||||||||| || | ||||||||||| || || || || || |||||||| || |||
Sbjct: 199 ttcaagacggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgag 258
Query: 425 gcctacctcgtcggcctgttcgaggacaccaa 456
|| ||||| || || |||| |||||||||||
Sbjct: 259 gcttacctggttggattgtttgaggacaccaa 290
>gb|U09462.1|MSU09462 Medicago sativa clone pH3c126 histone H3.2 mRNA, partial cds
Length = 571
Score = 87.7 bits (44), Expect = 1e-017
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 185 aagcagctcgccaccaaggcggcgaggaagtcggcgccgacgaccggcggcgtgaagaag 244
|||||||||||||||||||| || ||||| || || || || || || || || |||||
Sbjct: 28 aagcagctcgccaccaaggctgctaggaaatctgctcctactactggaggagtcaagaaa 87
Query: 245 ccccacaggtacaggcccgggacggtggcgctgcgcgagatccgcaagtaccagaagagc 304
|| ||| | ||| | || || || || || || || |||||||| ||||||||||||||
Sbjct: 88 cctcaccgataccgccctggaaccgtcgctcttcgtgagatccgtaagtaccagaagagt 147
Query: 305 acggagctgctgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggac 364
|| ||||| ||||||| ||| | || || ||||| || |||||||| || ||||| ||
Sbjct: 148 accgagcttttgatccgcaagcttccatttcagcgtcttgtccgtgaaattgctcaagat 207
Query: 365 ttcaagacggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgag 424
|||||||||||| || | ||||||||||| || || || || || |||||||| || |||
Sbjct: 208 ttcaagacggatttgagattccagagccatgcagttcttgcacttcaggaagcagctgag 267
Query: 425 gcctacctcgtcggcctgttcgaggacaccaa 456
|| ||||| || || |||| |||||||||||
Sbjct: 268 gcttacctggttggattgtttgaggacaccaa 299
>emb|X13677.1|MSHIS3C4 Medicago sativa mRNA for histone H3 C-terminal clone pH3c-12
Length = 322
Score = 83.8 bits (42), Expect = 2e-016
Identities = 138/170 (81%)
Strand = Plus / Plus
Query: 365 ttcaagacggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgag 424
|||||||| ||||| || ||||||||| |||||| ||| || || ||||| ||||||
Sbjct: 1 ttcaagactgatctccgtttccagagctccgccgtgtcggcactgcaagaagcggccgag 60
Query: 425 gcctacctcgtcggcctgttcgaggacaccaacctctgcgccatccacgcaaagcgcgtc 484
|| || |||||||| || || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 61 gcttatctcgtcggtctctttgaggatactaacctctgcgccattcatgccaagcgtgtc 120
Query: 485 accatcatgcccaaagacatccagctcgcccgccgcatccgcggcgagcg 534
|| |||||||| || || ||||||||||| | || ||||| ||||||||
Sbjct: 121 actatcatgcctaaggatatccagctcgctaggcgtatccgtggcgagcg 170
>gb|CO513649.1|CO513649 s13dSG17C0300018_140080 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 368
Score = 58.0 bits (29), Expect = 1e-008
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 290 aagtaccagaagagcacggagctgctgatccggaagttgcccttccagcgcctggtccgt 349
||||| |||||||| || ||||| ||||| ||||| | ||||||||| | |||| |||
Sbjct: 227 aagtatcagaagagtactgagctcttgatcaggaagctccccttccagaggttggttcgt 286
Query: 350 gagatcgctcaggacttcaagacggatctgcggttccagag 390
|| || ||||||||||||||||| || || || ||||||||
Sbjct: 287 gaaattgctcaggacttcaagactgaccttcgtttccagag 327
>gb|CO516848.1|CO516848 s13dSG98E0300019_447024 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 166
Score = 58.0 bits (29), Expect = 1e-008
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 290 aagtaccagaagagcacggagctgctgatccggaagttgcccttccagcgcctggtccgt 349
||||| |||||||| || ||||| ||||| ||||| | ||||||||| | |||| |||
Sbjct: 15 aagtatcagaagagtactgagctcttgatcaggaagctccccttccagaggttggttcgt 74
Query: 350 gagatcgctcaggacttcaagacggatctgcggttccagag 390
|| || ||||||||||||||||| || || || ||||||||
Sbjct: 75 gaaattgctcaggacttcaagactgaccttcgtttccagag 115
>gb|U09458.1|MSU09458 Medicago sativa cultivar Chief histone H3.2 gene, 5' region and
complete cds
Length = 1676
Score = 58.0 bits (29), Expect = 1e-008
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 131 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 190
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 483 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 542
Query: 191 ctcgccaccaagg 203
|||||||||||||
Sbjct: 543 ctcgccaccaagg 555
Score = 52.0 bits (26), Expect = 6e-007
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 281 gagatccgcaagtaccagaagagcacggagctgctgatccggaagttgcccttccagcgc 340
|||||||| |||||||||||||| || ||||| ||||||| ||| | || || |||||
Sbjct: 964 gagatccgtaagtaccagaagagtaccgagcttttgatccgcaagcttccatttcagcgt 1023
Query: 341 ctggtccgtgagatcgctcaggacttcaag 370
|| |||||||| || ||||| || ||||||
Sbjct: 1024 cttgtccgtgaaattgctcaagatttcaag 1053
Score = 48.1 bits (24), Expect = 1e-005
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 369 agacggatctgcggttccagagccacgccgtcctggccctccaggaagccgccgaggcct 428
||||||||||| | ||||||||||| || || || || || |||||||| || ||||| |
Sbjct: 1173 agacggatctgagattccagagccatgcagttcttgcacttcaggaagcagctgaggctt 1232
Query: 429 acctcgtcggcctgttcgaggacaccaa 456
|||| || || |||| |||||||||||
Sbjct: 1233 acctggttggattgtttgaggacaccaa 1260
Score = 42.1 bits (21), Expect = 6e-004
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 28 atggctcgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagcag 87
||||||||||| ||||| ||||| ||||| ||||| || || ||||| || | ||||||
Sbjct: 483 atggctcgtaccaagcaaaccgctcgcaaatccactggtggtaaggctccaaggaagcag 542
Query: 88 ctcgc 92
|||||
Sbjct: 543 ctcgc 547
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 54.0 bits (27), Expect = 2e-007
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 292 gtaccagaagagcacggagctgctgatccggaagttgcccttccagcgcctggtccgtga 351
||||||||||||||| ||||| |||||| |||| | || ||||| || || || |||||
Sbjct: 109 gtaccagaagagcacagagcttctgatcaggaaacttccattccaacgtcttgttcgtga 168
Query: 352 gatcgctcaggacttcaagacggatct 378
|||||| ||||| ||||| || |||||
Sbjct: 169 gatcgcacaggatttcaaaaccgatct 195
>gb|CO515400.1|CO515400 s13dSG49H1000092_417859 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 591
Score = 54.0 bits (27), Expect = 2e-007
Identities = 171/219 (78%)
Strand = Plus / Plus
Query: 290 aagtaccagaagagcacggagctgctgatccggaagttgcccttccagcgcctggtccgt 349
||||| |||||||| || ||||| ||||| ||||| | |||| |||| | |||| |||
Sbjct: 229 aagtatcagaagagtactgagctcttgatcaggaagctcccctcccagaggttggttcgt 288
Query: 350 gagatcgctcaggacttcaagacggatctgcggttccagagccacgccgtcctggccctc 409
|| || ||||||||||||||||| || || || |||||||| || || || || || |
Sbjct: 289 gaaattgctcaggacttcaagactgaccttcgtttccagagtcatgctgtgcttgcattg 348
Query: 410 caggaagccgccgaggcctacctcgtcggcctgttcgaggacaccaacctctgcgccatc 469
|| || || || ||||| || || || || ||||| |||||||| ||| | ||||| |||
Sbjct: 349 caagaggctgctgaggcatatcttgttggtctgtttgaggacactaacttgtgcgctatc 408
Query: 470 cacgcaaagcgcgtcaccatcatgcccaaagacatccag 508
|| || ||||| || || || |||||||| |||||||||
Sbjct: 409 catgccaagcgagttactattatgcccaaggacatccag 447
>gb|AW698444.1|AW698444 g394 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 406
Score = 48.1 bits (24), Expect = 1e-005
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 315 tgatccggaagttgcccttccagcgcctggtccgtgagatcgctcaggacttcaagacgg 374
||||| ||||| | ||||||||| | |||| ||||| || ||||||||||||||||| |
Sbjct: 11 tgatcaggaagctccccttccagaggttggttcgtgaaattgctcaggacttcaagactg 70
Query: 375 atctgcggttccagag 390
| || || ||||||||
Sbjct: 71 accttcgtttccagag 86
>gb|CO514111.1|CO514111 s13dSG75D0800062_156884 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 511
Score = 44.1 bits (22), Expect = 2e-004
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 332 ttccagcgcctggtccgtgagatcgctcaggacttcaagacggatctgcggttccagagc 391
|||||||| || || ||||| || |||||||| |||||||| ||| || | |||||||||
Sbjct: 250 ttccagcgtcttgttcgtgaaattgctcaggatttcaagacagatttgagattccagagc 309
Query: 392 ca 393
||
Sbjct: 310 ca 311
>gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 366
Score = 34.2 bits (17), Expect = 0.15
Identities = 35/41 (85%)
Strand = Plus / Plus
Query: 347 cgtgagatcgctcaggacttcaagacggatctgcggttcca 387
||||| ||||||||||| ||||| || ||||| || |||||
Sbjct: 74 cgtgaaatcgctcaggatttcaaaacagatctccgattcca 114
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1115
Number of Sequences: 7669
Number of extensions: 1115
Number of successful extensions: 230
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 173
Number of HSP's gapped (non-prelim): 55
length of query: 834
length of database: 3,745,706
effective HSP length: 16
effective length of query: 818
effective length of database: 3,623,002
effective search space: 2963615636
effective search space used: 2963615636
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)