BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 129373.2.1
         (1297 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512184.1|CO512184  s13dSG03A0600037_113882 Glandular tr...    36   0.060
gb|CO512250.1|CO512250  s13dSG03G0600040_114014 Glandular tr...    36   0.060
gb|CO512970.1|CO512970  s13dSG09A0600037_121866 Glandular tr...    36   0.060
gb|CO512999.1|CO512999  s13dSG09D0500042_121924 Glandular tr...    36   0.060
gb|CO513325.1|CO513325  s13dSG37F1100091_129814 Glandular tr...    36   0.060
gb|CO513891.1|CO513891  s13dSG73G0700052_156444 Glandular tr...    36   0.060
gb|CO514061.1|CO514061  s13dSG72H0400032_156784 Glandular tr...    36   0.060
gb|CO514485.1|CO514485  s13dSG43C0800056_327630 Glandular tr...    36   0.060
gb|CO513281.1|CO513281  s13dSG37B0900073_129726 Glandular tr...    34   0.24 

>gb|CO512184.1|CO512184 s13dSG03A0600037_113882 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 596

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 338 cattttccttgattactg 321



>gb|CO512250.1|CO512250 s13dSG03G0600040_114014 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 591

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 332 cattttccttgattactg 315



>gb|CO512970.1|CO512970 s13dSG09A0600037_121866 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 599

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 336 cattttccttgattactg 319



>gb|CO512999.1|CO512999 s13dSG09D0500042_121924 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 595

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 339 cattttccttgattactg 322



>gb|CO513325.1|CO513325 s13dSG37F1100091_129814 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 556

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 339 cattttccttgattactg 322



>gb|CO513891.1|CO513891 s13dSG73G0700052_156444 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 588

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 336 cattttccttgattactg 319



>gb|CO514061.1|CO514061 s13dSG72H0400032_156784 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 509

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 334 cattttccttgattactg 317



>gb|CO514485.1|CO514485 s13dSG43C0800056_327630 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 544

 Score = 36.2 bits (18), Expect = 0.060
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 823 cattttccttgattactg 840
           ||||||||||||||||||
Sbjct: 332 cattttccttgattactg 315



>gb|CO513281.1|CO513281 s13dSG37B0900073_129726 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 445

 Score = 34.2 bits (17), Expect = 0.24
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 612 tcacttgaatcatcatc 628
           |||||||||||||||||
Sbjct: 180 tcacttgaatcatcatc 164



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3338
Number of Sequences: 7669
Number of extensions: 3338
Number of successful extensions: 860
Number of sequences better than  0.5: 9
Number of HSP's better than  0.5 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 851
Number of HSP's gapped (non-prelim): 9
length of query: 1297
length of database: 3,745,706
effective HSP length: 16
effective length of query: 1281
effective length of database: 3,623,002
effective search space: 4641065562
effective search space used: 4641065562
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)