BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Y13733
(1516 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachi... 646 0.0
gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedl... 638 0.0
gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. v... 626 e-178
gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedl... 611 e-173
gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 ... 607 e-172
gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke devel... 563 e-159
gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedl... 557 e-157
gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hyd... 541 e-152
gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. v... 502 e-140
gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgar... 502 e-140
gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. v... 500 e-140
gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. v... 500 e-140
gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedl... 498 e-139
gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. v... 494 e-138
gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke devel... 472 e-131
gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-a... 470 e-131
gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, ... 468 e-130
gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedl... 446 e-123
gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. v... 438 e-121
gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachi... 432 e-119
gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. v... 414 e-114
gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. v... 410 e-113
gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. v... 408 e-112
gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. v... 406 e-112
gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. v... 402 e-110
gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. v... 402 e-110
gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachi... 398 e-109
gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachi... 394 e-108
gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hyd... 367 e-100
gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachi... 359 2e-097
gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke devel... 329 2e-088
gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. v... 313 9e-084
gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgar... 309 1e-082
gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA,... 285 2e-075
gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike... 281 3e-074
gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke devel... 274 8e-072
gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke devel... 228 4e-058
gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedl... 228 4e-058
gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA,... 198 4e-049
gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hyd... 180 9e-044
gb|BE602616.3|BE602616 HVSMEh0100I13f Hordeum vulgare 5-45 ... 123 2e-026
gb|BQ661990.1|BQ661990 HR01B24u HR Hordeum vulgare subsp. v... 117 1e-024
gb|BM097022.2|BM097022 EBpi07_SQ002_C11_R pistil, 12 DPA, n... 100 3e-019
gb|BE213985.3|BE213985 HV_CEb0001N07f Hordeum vulgare seedl... 78 1e-012
gb|AV917273.1|AV917273 AV917273 K. Sato unpublished cDNA li... 76 4e-012
gb|AV922443.1|AV922443 AV922443 K. Sato unpublished cDNA li... 76 4e-012
gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. v... 76 4e-012
gb|BI949722.1|BI949722 HVSMEl0015I24f Hordeum vulgare spike... 62 6e-008
gb|BG310264.2|BG310264 HVSMEc0016L11f Hordeum vulgare seedl... 62 6e-008
gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedl... 62 6e-008
gb|AV913778.1|AV913778 AV913778 K. Sato unpublished cDNA li... 62 6e-008
gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA li... 62 6e-008
gb|AV921205.1|AV921205 AV921205 K. Sato unpublished cDNA li... 62 6e-008
gb|AV921385.1|AV921385 AV921385 K. Sato unpublished cDNA li... 62 6e-008
gb|BQ467844.1|BQ467844 HR01B18r HR Hordeum vulgare subsp. v... 62 6e-008
gb|CA001190.1|CA001190 HS05A02u HS Hordeum vulgare subsp. v... 62 6e-008
gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedl... 60 2e-007
gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedl... 60 2e-007
gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green... 60 2e-007
gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachi... 60 2e-007
gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedl... 60 2e-007
gb|BQ761570.1|BQ761570 EBem10_SQ001_K03_R embryo, 2 Day ger... 60 2e-007
gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots... 54 1e-005
gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedl... 54 1e-005
gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedl... 54 1e-005
gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedl... 54 1e-005
gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedl... 54 1e-005
gb|BI960471.1|BI960471 HVSMEn0024L10f Hordeum vulgare rachi... 54 1e-005
gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachi... 54 1e-005
gb|BE454565.3|BE454565 HVSMEh0094E10f Hordeum vulgare 5-45 ... 54 1e-005
gb|BJ447263.1|BJ447263 BJ447263 K. Sato unpublished cDNA li... 54 1e-005
gb|BJ454765.1|BJ454765 BJ454765 K. Sato unpublished cDNA li... 54 1e-005
gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA,... 54 1e-005
gb|BM443343.2|BM443343 EBro02_SQ003_K20_R root, 3 week, hyd... 54 1e-005
gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, dro... 54 1e-005
gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, dro... 54 1e-005
gb|CA010065.1|CA010065 HT11L08u HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. v... 54 1e-005
gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiol... 52 5e-005
gb|AL501883.1|AL501883 AL501883 Hordeum vulgare Barke roots... 52 5e-005
gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedl... 52 5e-005
gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedl... 52 5e-005
gb|BF627817.2|BF627817 HVSMEb0005O02f Hordeum vulgare seedl... 52 5e-005
gb|BF628744.2|BF628744 HVSMEb0007K23f Hordeum vulgare seedl... 52 5e-005
gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedl... 52 5e-005
gb|BI957762.1|BI957762 HVSMEn0011B06f Hordeum vulgare rachi... 52 5e-005
gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, sal... 52 5e-005
gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, sal... 52 5e-005
gb|CB877686.1|CB877686 HP05N08T HP Hordeum vulgare subsp. v... 52 5e-005
gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots... 48 9e-004
gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedl... 48 9e-004
gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots... 46 0.003
gb|BQ467546.1|BQ467546 HS04C02r HS Hordeum vulgare subsp. v... 46 0.003
gb|CX662371.1|CX662371 EST 159 Expressed sequences from Bar... 46 0.003
gb|AL500806.1|AL500806 AL500806 Hordeum vulgare Barke roots... 44 0.013
gb|AL510227.1|AL510227 AL510227 Hordeum vulgare Barke devel... 44 0.013
gb|BG299533.1|BG299533 HVSMEa0020J23f Hordeum vulgare seedl... 44 0.013
gb|BF616628.3|BF616628 HVSMEc0010N21f Hordeum vulgare seedl... 44 0.013
gb|BF620700.3|BF620700 HVSMEc0020J23f Hordeum vulgare seedl... 44 0.013
gb|BE214044.2|BE214044 HV_CEb0001P23f Hordeum vulgare seedl... 44 0.013
gb|BQ467311.1|BQ467311 HS03F21r HS Hordeum vulgare subsp. v... 44 0.013
gb|BM368074.2|BM368074 EBed01_SQ002_B12_R endosperm, 6 DPA,... 44 0.013
gb|BM376461.2|BM376461 EBem05_SQ002_F07_R embryo, 14 DPA, n... 44 0.013
gb|BU999120.1|BU999120 HI13F05r HI Hordeum vulgare subsp. v... 44 0.013
gb|AL508480.1|AL508480 AL508480 Hordeum vulgare Barke devel... 42 0.053
gb|AV832545.1|AV832545 AV832545 K. Sato unpublished cDNA li... 42 0.053
gb|AV836836.1|AV836836 AV836836 K. Sato unpublished cDNA li... 42 0.053
gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedl... 42 0.053
gb|BI947283.1|BI947283 HVSMEl0005A06f Hordeum vulgare spike... 42 0.053
gb|BI950483.1|BI950483 HVSMEl0020O11f Hordeum vulgare spike... 42 0.053
gb|BI959387.1|BI959387 HVSMEn0019H17f Hordeum vulgare rachi... 42 0.053
gb|BQ458310.1|BQ458310 HA05J23r HA Hordeum vulgare subsp. v... 42 0.053
gb|BM099579.2|BM099579 EBes01_SQ003_K13_R embryo sac, 4-6 D... 42 0.053
gb|BQ756210.1|BQ756210 EBem06_SQ001_B07_R embryo, 21 DPA, n... 42 0.053
gb|BQ768475.1|BQ768475 EBro08_SQ011_G19_R root, 3 week, dro... 42 0.053
gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. v... 42 0.053
gb|BU997001.1|BU997001 HI06J07r HI Hordeum vulgare subsp. v... 42 0.053
gb|BJ545538.1|BJ545538 BJ545538 K. Sato unpublished cDNA li... 42 0.053
gb|CV055924.1|CV055924 BNEL12A11 Barley EST endosperm libra... 42 0.053
gb|CV063949.1|CV063949 BNEL95b11 Barley EST endosperm libra... 42 0.053
gb|AL500489.1|AL500489 AL500489 Hordeum vulgare Barke etiol... 40 0.21
gb|AL503929.1|AL503929 AL503929 Hordeum vulgare Barke roots... 40 0.21
gb|AL506872.1|AL506872 AL506872 Hordeum vulgare Barke devel... 40 0.21
gb|AL507217.1|AL507217 AL507217 Hordeum vulgare Barke devel... 40 0.21
gb|AL507368.1|AL507368 AL507368 Hordeum vulgare Barke devel... 40 0.21
gb|AL507704.1|AL507704 AL507704 Hordeum vulgare Barke devel... 40 0.21
gb|AL507814.1|AL507814 AL507814 Hordeum vulgare Barke devel... 40 0.21
gb|AL508127.1|AL508127 AL508127 Hordeum vulgare Barke devel... 40 0.21
gb|AL508630.1|AL508630 AL508630 Hordeum vulgare Barke devel... 40 0.21
gb|BF622994.1|BF622994 HVSMEa0012I07f Hordeum vulgare seedl... 40 0.21
gb|BG299306.1|BG299306 HVSMEa0019F01f Hordeum vulgare seedl... 40 0.21
gb|BF630849.2|BF630849 HVSMEb0014D17f Hordeum vulgare seedl... 40 0.21
gb|BF256346.2|BF256346 HVSMEf0009F04f Hordeum vulgare seedl... 40 0.21
gb|BI951899.1|BI951899 HVSMEm0003K08f Hordeum vulgare green... 40 0.21
gb|BI953573.1|BI953573 HVSMEm0013G03f Hordeum vulgare green... 40 0.21
gb|BI955335.1|BI955335 HVSMEm0022J16f Hordeum vulgare green... 40 0.21
gb|BI955729.1|BI955729 HVSMEm0024E04f Hordeum vulgare green... 40 0.21
gb|BI955740.1|BI955740 HVSMEm0024E20f Hordeum vulgare green... 40 0.21
gb|BF261490.2|BF261490 HV_CEa0001G19f Hordeum vulgare seedl... 40 0.21
gb|BF065362.2|BF065362 HV_CEb0012D17f Hordeum vulgare seedl... 40 0.21
gb|BI958051.1|BI958051 HVSMEn0013B20f Hordeum vulgare rachi... 40 0.21
gb|BF254616.3|BF254616 HVSMEf0004I10f Hordeum vulgare seedl... 40 0.21
gb|BF259935.3|BF259935 HVSMEf0020K16f Hordeum vulgare seedl... 40 0.21
gb|BE195901.3|BE195901 HVSMEh0090N09f Hordeum vulgare 5-45 ... 40 0.21
gb|BE214059.2|BE214059 HV_CEb0002B09f Hordeum vulgare seedl... 40 0.21
gb|BQ460148.1|BQ460148 HA07B12r HA Hordeum vulgare subsp. v... 40 0.21
gb|BQ461129.1|BQ461129 HE01B23r HE Hordeum vulgare subsp. v... 40 0.21
gb|BQ464396.1|BQ464396 HF02C14r HF Hordeum vulgare subsp. v... 40 0.21
gb|BQ464412.1|BQ464412 HF02D08r HF Hordeum vulgare subsp. v... 40 0.21
gb|BQ467691.1|BQ467691 HS04J05r HS Hordeum vulgare subsp. v... 40 0.21
gb|BQ468263.1|BQ468263 HP01K07T HP Hordeum vulgare subsp. v... 40 0.21
gb|BQ468806.1|BQ468806 HM02G10r HM Hordeum vulgare subsp. v... 40 0.21
gb|BQ469009.1|BQ469009 HM03B14r HM Hordeum vulgare subsp. v... 40 0.21
gb|BQ469579.1|BQ469579 HZ01D15r HZ Hordeum vulgare subsp. v... 40 0.21
gb|BM377158.2|BM377158 EBem05_SQ004_E18_R embryo, 14 DPA, n... 40 0.21
gb|BM368992.2|BM368992 EBem07_SQ002_D17_R embryo, 28 DPA, n... 40 0.21
gb|BM370600.2|BM370600 EBro08_SQ004_L09_R root, 3 week, dro... 40 0.21
gb|BQ757020.1|BQ757020 EBem10_SQ002_I13_R embryo, 2 Day ger... 40 0.21
gb|BQ768733.1|BQ768733 EBro08_SQ012_D17_R root, 3 week, dro... 40 0.21
gb|BU976563.1|BU976563 HA03O16r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU978209.1|BU978209 HA12M04r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU978517.1|BU978517 HA13H11r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU978527.1|BU978527 HA13H23r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU978729.1|BU978729 HA14B19r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU981723.1|BU981723 HA24H04r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU982919.1|BU982919 HA27P20r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU983414.1|BU983414 HA29K13r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU983461.1|BU983461 HA29N06r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU983705.1|BU983705 HA30L10r HA Hordeum vulgare subsp. v... 40 0.21
gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. v... 40 0.21
gb|BU995425.1|BU995425 HM10D13r HM Hordeum vulgare subsp. v... 40 0.21
gb|BU999740.1|BU999740 HI15J03r HI Hordeum vulgare subsp. v... 40 0.21
gb|CA002238.1|CA002238 HS06O15r HS Hordeum vulgare subsp. v... 40 0.21
gb|CA003040.1|CA003040 HS09D04r HS Hordeum vulgare subsp. v... 40 0.21
gb|CA007420.1|CA007420 HU07O14r HU Hordeum vulgare subsp. v... 40 0.21
gb|CA018337.1|CA018337 HV08F10r HV Hordeum vulgare subsp. v... 40 0.21
gb|CA023327.1|CA023327 HZ45O06r HZ Hordeum vulgare subsp. v... 40 0.21
gb|CA025213.1|CA025213 HZ51I11r HZ Hordeum vulgare subsp. v... 40 0.21
gb|CA027364.1|CA027364 HZ58K23r HZ Hordeum vulgare subsp. v... 40 0.21
gb|CA028332.1|CA028332 HZ61K16r HZ Hordeum vulgare subsp. v... 40 0.21
gb|CA030777.1|CA030777 HX08B16r HX Hordeum vulgare subsp. v... 40 0.21
gb|CA031768.1|CA031768 HX11B08r HX Hordeum vulgare subsp. v... 40 0.21
gb|CB876748.1|CB876748 HP02E12T HP Hordeum vulgare subsp. v... 40 0.21
gb|CB877472.1|CB877472 HP05A21T HP Hordeum vulgare subsp. v... 40 0.21
gb|CB879324.1|CB879324 HP11M01T HP Hordeum vulgare subsp. v... 40 0.21
gb|CB882751.1|CB882751 HL02L24w HL Hordeum vulgare subsp. v... 40 0.21
gb|CK124459.1|CK124459 BES1824109d13 BES1824 Hordeum vulgar... 40 0.21
gb|CK125767.1|CK125767 BES1824110l22 BES1824 Hordeum vulgar... 40 0.21
gb|AF294753.1| Hordeum vulgare subsp. vulgare glutamyl-tRNA... 40 0.21
gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene lo... 40 0.21
gb|AL505892.1|AL505892 AL505892 Hordeum vulgare Barke roots... 38 0.83
gb|AL506224.1|AL506224 AL506224 Hordeum vulgare Barke devel... 38 0.83
gb|AL506492.1|AL506492 AL506492 Hordeum vulgare Barke devel... 38 0.83
gb|AL507853.1|AL507853 AL507853 Hordeum vulgare Barke devel... 38 0.83
gb|AL508242.1|AL508242 AL508242 Hordeum vulgare Barke devel... 38 0.83
gb|BF621498.1|BF621498 HVSMEa0011D06f Hordeum vulgare seedl... 38 0.83
gb|BF621349.2|BF621349 HVSMEa0006J13f Hordeum vulgare seedl... 38 0.83
gb|BF623129.3|BF623129 HVSMEa0014J20f Hordeum vulgare seedl... 38 0.83
gb|BF628195.2|BF628195 HVSMEb0003G06f Hordeum vulgare seedl... 38 0.83
gb|BF629950.2|BF629950 HVSMEb0007H03f Hordeum vulgare seedl... 38 0.83
gb|BF631575.2|BF631575 HVSMEb0016H13f Hordeum vulgare seedl... 38 0.83
gb|BG300418.1|BG300418 HVSMEb0016P18f Hordeum vulgare seedl... 38 0.83
gb|BF254703.2|BF254703 HVSMEf0004M13f Hordeum vulgare seedl... 38 0.83
gb|BF255211.2|BF255211 HVSMEf0006E02f Hordeum vulgare seedl... 38 0.83
gb|BF256229.2|BF256229 HVSMEf0009D07f Hordeum vulgare seedl... 38 0.83
gb|BF256422.2|BF256422 HVSMEf0009J10f Hordeum vulgare seedl... 38 0.83
gb|BF257343.2|BF257343 HVSMEf0012J20f Hordeum vulgare seedl... 38 0.83
gb|BF257655.2|BF257655 HVSMEf0013H15f Hordeum vulgare seedl... 38 0.83
gb|BF257799.2|BF257799 HVSMEf0013O11f Hordeum vulgare seedl... 38 0.83
gb|BF259803.2|BF259803 HVSMEf0020E23f Hordeum vulgare seedl... 38 0.83
gb|BE194891.2|BE194891 HVSMEh0087H04f Hordeum vulgare 5-45 ... 38 0.83
gb|BG367021.1|BG367021 HVSMEi0009N14f Hordeum vulgare 20 DA... 38 0.83
gb|BI947534.1|BI947534 HVSMEl0005M21f Hordeum vulgare spike... 38 0.83
gb|BI956379.1|BI956379 HVSMEn0003A09f Hordeum vulgare rachi... 38 0.83
gb|BI957670.1|BI957670 HVSMEn0010J13f Hordeum vulgare rachi... 38 0.83
gb|BI957877.1|BI957877 HVSMEn0011N21f Hordeum vulgare rachi... 38 0.83
gb|BF263809.2|BF263809 HV_CEa0007L18f Hordeum vulgare seedl... 38 0.83
gb|BE214873.2|BE214873 HV_CEb0004P08f Hordeum vulgare seedl... 38 0.83
gb|BE215275.2|BE215275 HV_CEb0006F17f Hordeum vulgare seedl... 38 0.83
gb|BE215567.2|BE215567 HV_CEb0008C14f Hordeum vulgare seedl... 38 0.83
gb|BI959345.1|BI959345 HVSMEn0019F04f Hordeum vulgare rachi... 38 0.83
gb|BF255672.3|BF255672 HVSMEf0007H21f Hordeum vulgare seedl... 38 0.83
gb|BF257006.3|BF257006 HVSMEf0011J16f Hordeum vulgare seedl... 38 0.83
gb|AW982552.3|AW982552 HVSMEg0003J07f Hordeum vulgare pre-a... 38 0.83
gb|AW982976.3|AW982976 HVSMEg0004L10f Hordeum vulgare pre-a... 38 0.83
gb|BE060287.3|BE060287 HVSMEg0011N20f Hordeum vulgare pre-a... 38 0.83
gb|BG344999.2|BG344999 HVSMEg0018D23f Hordeum vulgare pre-a... 38 0.83
gb|BE454994.3|BE454994 HVSMEh0095M19f Hordeum vulgare 5-45 ... 38 0.83
gb|BE455148.3|BE455148 HVSMEh0096F22f Hordeum vulgare 5-45 ... 38 0.83
gb|BG368904.2|BG368904 HVSMEi0021D19f Hordeum vulgare 20 DA... 38 0.83
gb|BG414719.2|BG414719 HVSMEk0003I05f Hordeum vulgare testa... 38 0.83
gb|BG416159.2|BG416159 HVSMEk0009P23f Hordeum vulgare testa... 38 0.83
gb|BG416695.2|BG416695 HVSMEk0014C10f Hordeum vulgare testa... 38 0.83
gb|BG417130.2|BG417130 HVSMEk0016G04f Hordeum vulgare testa... 38 0.83
gb|BF264414.3|BF264414 HV_CEa0009F20f Hordeum vulgare seedl... 38 0.83
gb|BF267750.3|BF267750 HV_CEa0018M15f Hordeum vulgare seedl... 38 0.83
gb|BE213867.3|BE213867 HV_CEb0001H23f Hordeum vulgare seedl... 38 0.83
gb|BF065394.3|BF065394 HV_CEb0012F02f Hordeum vulgare seedl... 38 0.83
gb|BM101138.1|BM101138 EBpi01_SQ002_P22_R pistil, 1 DPA, no... 38 0.83
gb|BM374916.1|BM374916 EBma05_SQ003_I16_R maternal, 12 DPA,... 38 0.83
gb|BM374939.1|BM374939 EBma05_SQ003_L05_R maternal, 12 DPA,... 38 0.83
gb|BM374955.1|BM374955 EBma05_SQ003_M13_R maternal, 12 DPA,... 38 0.83
gb|AV913780.1|AV913780 AV913780 K. Sato unpublished cDNA li... 38 0.83
gb|AV922832.1|AV922832 AV922832 K. Sato unpublished cDNA li... 38 0.83
gb|AV923405.1|AV923405 AV923405 K. Sato unpublished cDNA li... 38 0.83
gb|AV923627.1|AV923627 AV923627 K. Sato unpublished cDNA li... 38 0.83
gb|AV923677.1|AV923677 AV923677 K. Sato unpublished cDNA li... 38 0.83
gb|AV923826.1|AV923826 AV923826 K. Sato unpublished cDNA li... 38 0.83
gb|AV923952.1|AV923952 AV923952 K. Sato unpublished cDNA li... 38 0.83
gb|AV925376.1|AV925376 AV925376 K. Sato unpublished cDNA li... 38 0.83
gb|AV925997.1|AV925997 AV925997 K. Sato unpublished cDNA li... 38 0.83
gb|AV932756.1|AV932756 AV932756 K. Sato unpublished cDNA li... 38 0.83
gb|BM444695.1|BM444695 EBem09_SQ006_D11_R embryo, 1 Day ger... 38 0.83
gb|BM817279.1|BM817279 HC05F10_T3.ab1 HC Hordeum vulgare su... 38 0.83
gb|BJ451037.1|BJ451037 BJ451037 K. Sato unpublished cDNA li... 38 0.83
gb|BJ458543.1|BJ458543 BJ458543 K. Sato unpublished cDNA li... 38 0.83
gb|BJ469563.1|BJ469563 BJ469563 K. Sato unpublished cDNA li... 38 0.83
gb|BJ470214.1|BJ470214 BJ470214 K. Sato unpublished cDNA li... 38 0.83
gb|BJ470315.1|BJ470315 BJ470315 K. Sato unpublished cDNA li... 38 0.83
gb|BJ471556.1|BJ471556 BJ471556 K. Sato unpublished cDNA li... 38 0.83
gb|BJ472147.1|BJ472147 BJ472147 K. Sato unpublished cDNA li... 38 0.83
gb|BJ473655.1|BJ473655 BJ473655 K. Sato unpublished cDNA li... 38 0.83
gb|BJ474154.1|BJ474154 BJ474154 K. Sato unpublished cDNA li... 38 0.83
gb|BJ475649.1|BJ475649 BJ475649 K. Sato unpublished cDNA li... 38 0.83
gb|BJ476163.1|BJ476163 BJ476163 K. Sato unpublished cDNA li... 38 0.83
gb|BQ458538.1|BQ458538 HA04P05r HA Hordeum vulgare subsp. v... 38 0.83
gb|BQ459450.1|BQ459450 HA01A21r HA Hordeum vulgare subsp. v... 38 0.83
gb|BQ459583.1|BQ459583 HA08K24r HA Hordeum vulgare subsp. v... 38 0.83
gb|BQ459791.1|BQ459791 HA08B08r HA Hordeum vulgare subsp. v... 38 0.83
gb|BQ459918.1|BQ459918 HA07L14r HA Hordeum vulgare subsp. v... 38 0.83
gb|BQ460140.1|BQ460140 HA07C04r HA Hordeum vulgare subsp. v... 38 0.83
gb|BQ466049.1|BQ466049 HT01G24T HT Hordeum vulgare subsp. v... 38 0.83
gb|BQ466375.1|BQ466375 HT02F17r HT Hordeum vulgare subsp. v... 38 0.83
gb|BQ466655.1|BQ466655 HS01C19T HS Hordeum vulgare subsp. v... 38 0.83
gb|BQ466732.1|BQ466732 HS01G14T HS Hordeum vulgare subsp. v... 38 0.83
gb|BQ467049.1|BQ467049 HS02G14r HS Hordeum vulgare subsp. v... 38 0.83
gb|BQ467407.1|BQ467407 HS03K14r HS Hordeum vulgare subsp. v... 38 0.83
gb|BQ470239.1|BQ470239 HX02D19r HX Hordeum vulgare subsp. v... 38 0.83
gb|BQ470678.1|BQ470678 HX03L02r HX Hordeum vulgare subsp. v... 38 0.83
gb|BQ470994.1|BQ470994 HX04K13r HX Hordeum vulgare subsp. v... 38 0.83
gb|BQ471151.1|BQ471151 HV01D19T HV Hordeum vulgare subsp. v... 38 0.83
gb|BQ471467.1|BQ471467 HV02I04r HV Hordeum vulgare subsp. v... 38 0.83
gb|BQ471728.1|BQ471728 HV03E18r HV Hordeum vulgare subsp. v... 38 0.83
gb|BQ664445.1|BQ664445 HV03E18u HV Hordeum vulgare subsp. v... 38 0.83
gb|BM442622.2|BM442622 EBan01_SQ003_L05_R anther, yellow st... 38 0.83
gb|BI776242.2|BI776242 EBem04_SQ001_C08_R embryo, 12 DPA, n... 38 0.83
gb|BM097575.2|BM097575 EBem04_SQ002_B13_R embryo, 12 DPA, n... 38 0.83
gb|BM097605.2|BM097605 EBem04_SQ002_C23_R embryo, 12 DPA, n... 38 0.83
gb|BM097826.2|BM097826 EBem04_SQ002_N01_R embryo, 12 DPA, n... 38 0.83
gb|BM377445.2|BM377445 EBem04_SQ003_C13_R embryo, 12 DPA, n... 38 0.83
gb|BM377495.2|BM377495 EBem04_SQ003_E23_R embryo, 12 DPA, n... 38 0.83
gb|BM377511.2|BM377511 EBem04_SQ003_F17_R embryo, 12 DPA, n... 38 0.83
gb|BI779761.2|BI779761 EBem05_SQ001_I13_R embryo, 14 DPA, n... 38 0.83
gb|BM376395.2|BM376395 EBem05_SQ002_B17_R embryo, 14 DPA, n... 38 0.83
gb|BM377234.2|BM377234 EBem05_SQ004_I06_R embryo, 14 DPA, n... 38 0.83
gb|BM375060.2|BM375060 EBem06_SQ002_D13_R embryo, 21 DPA, n... 38 0.83
gb|BM375809.2|BM375809 EBem06_SQ004_H16_R embryo, 21 DPA, n... 38 0.83
gb|BM375816.2|BM375816 EBem06_SQ004_H24_R embryo, 21 DPA, n... 38 0.83
gb|BM369237.2|BM369237 EBem07_SQ003_A03_R embryo, 28 DPA, n... 38 0.83
gb|BM369343.2|BM369343 EBem07_SQ003_F01_R embryo, 28 DPA, n... 38 0.83
gb|BM369801.2|BM369801 EBem07_SQ004_K11_R embryo, 28 DPA, n... 38 0.83
gb|BM098433.2|BM098433 EBem08_SQ003_A18_R embryo, 40 DPA, n... 38 0.83
gb|BM098515.2|BM098515 EBem08_SQ003_E13_R embryo, 40 DPA, n... 38 0.83
gb|BM368694.2|BM368694 EBem08_SQ004_F14_R embryo, 40 DPA, n... 38 0.83
gb|BI780698.2|BI780698 EBes01_SQ001_N07_R embryo sac, 4-6 D... 38 0.83
gb|BM100004.2|BM100004 EBes01_SQ004_O04_R embryo sac, 4-6 D... 38 0.83
gb|BM100344.2|BM100344 EBma01_SQ001_O18_R maternal, 4 DPA, ... 38 0.83
gb|BM374024.2|BM374024 EBma03_SQ003_G16_R maternal, 8 DPA, ... 38 0.83
gb|BM372952.2|BM372952 EBma04_SQ002_I14_R maternal, 10 DPA,... 38 0.83
gb|BM096567.2|BM096567 EBma05_SQ001_L23_R maternal, 12 DPA,... 38 0.83
gb|BM096803.2|BM096803 EBma07_SQ001_L08_R maternal, 21 DPA,... 38 0.83
gb|BM371965.2|BM371965 EBma08_SQ004_I16_R maternal, 28 DPA,... 38 0.83
gb|BM100917.2|BM100917 EBpi01_SQ002_F21_R pistil, 1 DPA, no... 38 0.83
gb|BM098814.2|BM098814 EBpi05_SQ002_C07_R pistil, 8 DPA, no... 38 0.83
gb|BM372709.2|BM372709 EBpi05_SQ003_L12_R pistil, 8 DPA, no... 38 0.83
gb|BI776737.2|BI776737 EBpi07_SQ001_J15_R pistil, 12 DPA, n... 38 0.83
gb|BI779628.2|BI779628 EBro01_SQ004_J23_R root, 3 week, hyd... 38 0.83
gb|BM443065.2|BM443065 EBro02_SQ002_G04_R root, 3 week, hyd... 38 0.83
gb|BM372264.2|BM372264 EBro03_SQ004_H14_R root, 3 week, wat... 38 0.83
gb|BI777504.2|BI777504 EBro04_SQ001_G21_R root, 3 week, sal... 38 0.83
gb|BI778632.2|BI778632 EBro07_SQ003_N19_R root, 3 week, red... 38 0.83
gb|BI777687.2|BI777687 EBro08_SQ001_G10_R root, 3 week, dro... 38 0.83
gb|BI777837.2|BI777837 EBro08_SQ002_E04_R root, 3 week, dro... 38 0.83
gb|BM370331.2|BM370331 EBro08_SQ003_N23_R root, 3 week, dro... 38 0.83
gb|BM370623.2|BM370623 EBro08_SQ004_M11_R root, 3 week, dro... 38 0.83
gb|BQ754269.1|BQ754269 EBca01_SQ003_G06_R carpel, pre-anthe... 38 0.83
gb|BQ755039.1|BQ755039 EBed02_SQ003_I17_R endosperm, 8 DPA,... 38 0.83
gb|BQ756097.1|BQ756097 EBem05_SQ001_L06_R embryo, 14 DPA, n... 38 0.83
gb|BQ756855.1|BQ756855 EBem09_SQ003_P10_R embryo, 1 Day ger... 38 0.83
gb|BQ757289.1|BQ757289 EBem10_SQ003_J15_R embryo, 2 Day ger... 38 0.83
gb|BQ758756.1|BQ758756 EBma07_SQ002_P15_R maternal, 21 DPA,... 38 0.83
gb|BQ759074.1|BQ759074 EBma07_SQ003_N18_R maternal, 21 DPA,... 38 0.83
gb|BQ760704.1|BQ760704 EBro03_SQ003_D22_R root, 3 week, wat... 38 0.83
gb|BQ760865.1|BQ760865 EBro03_SQ003_L03_R root, 3 week, wat... 38 0.83
gb|BQ760993.1|BQ760993 EBro03_SQ004_P16_R root, 3 week, wat... 38 0.83
gb|BQ761192.1|BQ761192 EBro04_SQ004_J22_R root, 3 week, sal... 38 0.83
gb|BQ761610.1|BQ761610 EBem10_SQ001_D11_R embryo, 2 Day ger... 38 0.83
gb|BQ762368.1|BQ762368 EBro01_SQ005_J17_R root, 3 week, hyd... 38 0.83
gb|BQ762970.1|BQ762970 EBro02_SQ006_P18_R root, 3 week, hyd... 38 0.83
gb|BQ763678.1|BQ763678 EBro03_SQ005_J04_R root, 3 week, wat... 38 0.83
gb|BQ764923.1|BQ764923 EBca01_SQ005_D10_R carpel, pre-anthe... 38 0.83
gb|BQ766412.1|BQ766412 EBro08_SQ005_M21_R root, 3 week, dro... 38 0.83
gb|BQ767045.1|BQ767045 EBro08_SQ007_E19_R root, 3 week, dro... 38 0.83
gb|BQ768089.1|BQ768089 EBro08_SQ010_M13_R root, 3 week, dro... 38 0.83
gb|BU970502.1|BU970502 HB14N08r BC Hordeum vulgare subsp. v... 38 0.83
gb|BU974028.1|BU974028 HB26L02r BC Hordeum vulgare subsp. v... 38 0.83
gb|BU976189.1|BU976189 HA03E21r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU977420.1|BU977420 HA11G09r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU978015.1|BU978015 HA12G22r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU978064.1|BU978064 HA12I04r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU978776.1|BU978776 HA14D20r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU979391.1|BU979391 HA16A03r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU979725.1|BU979725 HA17B03r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU979729.1|BU979729 HA17B07r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU980013.1|BU980013 HA18D11r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU980758.1|BU980758 HA21J18r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU980841.1|BU980841 HA21N16r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU981168.1|BU981168 HA22N08r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU981473.1|BU981473 HA23L17r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU982269.1|BU982269 HA26A08r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU982786.1|BU982786 HA27J18r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU982846.1|BU982846 HA27M13r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU982952.1|BU982952 HA28B13r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU983131.1|BU983131 HA28K10r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU983196.1|BU983196 HA28N21r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU983401.1|BU983401 HA29J20r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU983443.1|BU983443 HA29M01r HA Hordeum vulgare subsp. v... 38 0.83
gb|BU985068.1|BU985068 HF06A16r HF Hordeum vulgare subsp. v... 38 0.83
gb|BU985107.1|BU985107 HF06C11r HF Hordeum vulgare subsp. v... 38 0.83
gb|BU995602.1|BU995602 HM10M10r HM Hordeum vulgare subsp. v... 38 0.83
gb|BU995876.1|BU995876 HM11K12r HM Hordeum vulgare subsp. v... 38 0.83
gb|BU996080.1|BU996080 HM12G03r HM Hordeum vulgare subsp. v... 38 0.83
gb|BU996464.1|BU996464 HM13L04r HM Hordeum vulgare subsp. v... 38 0.83
gb|BU996661.1|BU996661 HM14F05r HM Hordeum vulgare subsp. v... 38 0.83
gb|BU997752.1|BU997752 HI08O14r HI Hordeum vulgare subsp. v... 38 0.83
gb|BU997755.1|BU997755 HI08O17r HI Hordeum vulgare subsp. v... 38 0.83
gb|BU999426.1|BU999426 HI14H14r HI Hordeum vulgare subsp. v... 38 0.83
gb|CA002333.1|CA002333 HS07C24r HS Hordeum vulgare subsp. v... 38 0.83
gb|CA002410.1|CA002410 HS07G18r HS Hordeum vulgare subsp. v... 38 0.83
gb|CA007265.1|CA007265 HU07F23r HU Hordeum vulgare subsp. v... 38 0.83
gb|CA009038.1|CA009038 HU12P23r HU Hordeum vulgare subsp. v... 38 0.83
gb|CA009531.1|CA009531 HU14G07r HU Hordeum vulgare subsp. v... 38 0.83
gb|CA012011.1|CA012011 HT04C22r HT Hordeum vulgare subsp. v... 38 0.83
gb|CA012268.1|CA012268 HT04P01r HT Hordeum vulgare subsp. v... 38 0.83
gb|CA012336.1|CA012336 HT05C09r HT Hordeum vulgare subsp. v... 38 0.83
gb|CA013307.1|CA013307 HT08A02r HT Hordeum vulgare subsp. v... 38 0.83
gb|CA013552.1|CA013552 HT08N02r HT Hordeum vulgare subsp. v... 38 0.83
gb|CA014821.1|CA014821 HT12H05r HT Hordeum vulgare subsp. v... 38 0.83
gb|CA017609.1|CA017609 HV05L06r HV Hordeum vulgare subsp. v... 38 0.83
gb|CA019891.1|CA019891 HV13K03r HV Hordeum vulgare subsp. v... 38 0.83
gb|CA020029.1|CA020029 HV14C04r HV Hordeum vulgare subsp. v... 38 0.83
gb|CA020164.1|CA020164 HV14I11r HV Hordeum vulgare subsp. v... 38 0.83
gb|CA021198.1|CA021198 HZ39G13r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA022377.1|CA022377 HZ42P01r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA023492.1|CA023492 HZ46G18r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA025518.1|CA025518 HZ52G07r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA026299.1|CA026299 HZ55I05r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA029111.1|CA029111 HZ64D18r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA029552.1|CA029552 HZ65I19r HZ Hordeum vulgare subsp. v... 38 0.83
gb|CA029841.1|CA029841 HX05F22r HX Hordeum vulgare subsp. v... 38 0.83
gb|CA030363.1|CA030363 HX06N09r HX Hordeum vulgare subsp. v... 38 0.83
gb|CA030850.1|CA030850 HX08F02r HX Hordeum vulgare subsp. v... 38 0.83
gb|CA031959.1|CA031959 HX11J19r HX Hordeum vulgare subsp. v... 38 0.83
gb|CB858980.1|CB858980 HI08O14w HI Hordeum vulgare subsp. v... 38 0.83
gb|CB881772.1|CB881772 HM10N09w HM Hordeum vulgare subsp. v... 38 0.83
gb|CB882029.1|CB882029 HM11K12w HM Hordeum vulgare subsp. v... 38 0.83
gb|CB883568.1|CB883568 HQ02K08w HQ Hordeum vulgare subsp. v... 38 0.83
gb|CV053615.1|CV053615 BNEL101c10 Barley EST endosperm libr... 38 0.83
gb|CV053646.1|CV053646 BNEL101f1 Barley EST endosperm libra... 38 0.83
gb|CV054045.1|CV054045 BNEL106b3 Barley EST endosperm libra... 38 0.83
gb|CV054193.1|CV054193 BNEL107g4 Barley EST endosperm libra... 38 0.83
gb|CV054259.1|CV054259 BNEL108e4 Barley EST endosperm libra... 38 0.83
gb|CV055505.1|CV055505 BNEL120d4 Barley EST endosperm libra... 38 0.83
gb|CV056755.1|CV056755 BNEL20c2 Barley EST endosperm librar... 38 0.83
gb|CV057097.1|CV057097 BNEL24a11 Barley EST endosperm libra... 38 0.83
gb|CV059230.1|CV059230 BNEL45h1 Barley EST endosperm librar... 38 0.83
gb|CV060296.1|CV060296 BNEL56e9 Barley EST endosperm librar... 38 0.83
gb|CV060837.1|CV060837 BNEL61g5 Barley EST endosperm librar... 38 0.83
gb|CV061169.1|CV061169 BNEL65g1 Barley EST endosperm librar... 38 0.83
gb|CV061606.1|CV061606 BNEL6H10 Barley EST endosperm librar... 38 0.83
gb|CV062519.1|CV062519 BNEL7H9 Barley EST endosperm library... 38 0.83
gb|CV062841.1|CV062841 BNEL83f5 Barley EST endosperm librar... 38 0.83
gb|CV063289.1|CV063289 BNEL88f9 Barley EST endosperm librar... 38 0.83
gb|CV064177.1|CV064177 BNEL98h5 Barley EST endosperm librar... 38 0.83
gb|CV064203.1|CV064203 BNEL99c12 Barley EST endosperm libra... 38 0.83
gb|CK122414.1|CK122414 BES1824103e21 BES1824 Hordeum vulgar... 38 0.83
gb|CK122623.1|CK122623 BES1824104n11 BES1824 Hordeum vulgar... 38 0.83
gb|CK123614.1|CK123614 BES1824104l13 BES1824 Hordeum vulgar... 38 0.83
gb|CK124163.1|CK124163 BES1824107e09 BES1824 Hordeum vulgar... 38 0.83
gb|CK124945.1|CK124945 BES1824111A2b12 BES1824 Hordeum vulg... 38 0.83
gb|CK125736.1|CK125736 BES1824110j06 BES1824 Hordeum vulgar... 38 0.83
emb|AJ303115.1|HVU303115 Hordeum vulgare partial mRNA for l... 38 0.83
gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex B... 38 0.83
gb|AU089923.1|AU089923 AU089923 Hordeum vulgare subsp. vulg... 36 3.3
gb|BE411117.1|BE411117 ISC001.B12F990318 ITEC ISC Barley Le... 36 3.3
gb|BE411333.1|BE411333 ISC004.E03F990602 ITEC ISC Barley Le... 36 3.3
gb|BE420648.1|BE420648 HWM001.B01 ITEC HWM Barley Leaf Libr... 36 3.3
gb|BE420846.1|BE420846 HWM003.B07 ITEC HWM Barley Leaf Libr... 36 3.3
gb|BE420858.1|BE420858 HWM003.C07 ITEC HWM Barley Leaf Libr... 36 3.3
gb|BE421459.1|BE421459 HWM009.E08 ITEC HWM Barley Leaf Libr... 36 3.3
gb|BE421887.1|BE421887 HWM016cB.02r ITEC HWM Barley Leaf Li... 36 3.3
gb|BE421937.1|BE421937 HWM016cG.06r ITEC HWM Barley Leaf Li... 36 3.3
gb|BE422146.1|BE422146 HWM020cF.09r ITEC HWM Barley Leaf Li... 36 3.3
gb|BE422149.1|BE422149 HWM020cF.12r ITEC HWM Barley Leaf Li... 36 3.3
gb|BE422222.1|BE422222 HWM021cG.04r ITEC HWM Barley Leaf Li... 36 3.3
gb|BE422434.1|BE422434 HWM024cH.02r ITEC HWM Barley Leaf Li... 36 3.3
gb|AL450614.1|AL450614 AL450614 Hordeum vulgare Barke etiol... 36 3.3
gb|AL450738.1|AL450738 AL450738 Hordeum vulgare Barke etiol... 36 3.3
gb|AL450813.1|AL450813 AL450813 Hordeum vulgare Barke etiol... 36 3.3
gb|AL499789.1|AL499789 AL499789 Hordeum vulgare Barke etiol... 36 3.3
gb|AL501043.1|AL501043 AL501043 Hordeum vulgare Barke roots... 36 3.3
gb|AL502568.1|AL502568 AL502568 Hordeum vulgare Barke roots... 36 3.3
gb|AL503966.1|AL503966 AL503966 Hordeum vulgare Barke roots... 36 3.3
gb|AL504275.1|AL504275 AL504275 Hordeum vulgare Barke roots... 36 3.3
gb|AL504298.1|AL504298 AL504298 Hordeum vulgare Barke roots... 36 3.3
gb|AL504942.1|AL504942 AL504942 Hordeum vulgare Barke roots... 36 3.3
gb|AL505214.1|AL505214 AL505214 Hordeum vulgare Barke roots... 36 3.3
gb|AL505516.1|AL505516 AL505516 Hordeum vulgare Barke roots... 36 3.3
gb|AL506196.1|AL506196 AL506196 Hordeum vulgare Barke devel... 36 3.3
gb|AL506442.1|AL506442 AL506442 Hordeum vulgare Barke devel... 36 3.3
gb|AL506602.1|AL506602 AL506602 Hordeum vulgare Barke devel... 36 3.3
gb|AL507234.1|AL507234 AL507234 Hordeum vulgare Barke devel... 36 3.3
gb|AL507385.1|AL507385 AL507385 Hordeum vulgare Barke devel... 36 3.3
gb|AL508124.1|AL508124 AL508124 Hordeum vulgare Barke devel... 36 3.3
gb|AL508290.1|AL508290 AL508290 Hordeum vulgare Barke devel... 36 3.3
gb|AL508326.1|AL508326 AL508326 Hordeum vulgare Barke devel... 36 3.3
gb|AL508411.1|AL508411 AL508411 Hordeum vulgare Barke devel... 36 3.3
gb|AL508675.1|AL508675 AL508675 Hordeum vulgare Barke devel... 36 3.3
gb|AL508713.1|AL508713 AL508713 Hordeum vulgare Barke devel... 36 3.3
gb|AL508903.1|AL508903 AL508903 Hordeum vulgare Barke devel... 36 3.3
gb|AL509595.1|AL509595 AL509595 Hordeum vulgare Barke devel... 36 3.3
gb|AL510313.1|AL510313 AL510313 Hordeum vulgare Barke devel... 36 3.3
gb|AL510758.1|AL510758 AL510758 Hordeum vulgare Barke devel... 36 3.3
gb|AL510810.1|AL510810 AL510810 Hordeum vulgare Barke devel... 36 3.3
gb|AL510903.1|AL510903 AL510903 Hordeum vulgare Barke devel... 36 3.3
gb|AV836342.1|AV836342 AV836342 K. Sato unpublished cDNA li... 36 3.3
gb|AV836598.1|AV836598 AV836598 K. Sato unpublished cDNA li... 36 3.3
gb|BF622292.2|BF622292 HVSMEa0002I21f Hordeum vulgare seedl... 36 3.3
gb|BF623685.2|BF623685 HVSMEa0003M04f Hordeum vulgare seedl... 36 3.3
gb|BF622515.2|BF622515 HVSMEa0004K21f Hordeum vulgare seedl... 36 3.3
gb|BF624977.2|BF624977 HVSMEa0005F16f Hordeum vulgare seedl... 36 3.3
gb|BF623778.2|BF623778 HVSMEa0005M17f Hordeum vulgare seedl... 36 3.3
gb|BF623881.2|BF623881 HVSMEa0007H11f Hordeum vulgare seedl... 36 3.3
gb|BF621664.2|BF621664 HVSMEa0011M15f Hordeum vulgare seedl... 36 3.3
gb|BF622914.2|BF622914 HVSMEa0012A19f Hordeum vulgare seedl... 36 3.3
gb|BF625683.2|BF625683 HVSMEa0013D19f Hordeum vulgare seedl... 36 3.3
gb|BF625867.2|BF625867 HVSMEa0013O20f Hordeum vulgare seedl... 36 3.3
gb|BF625934.2|BF625934 HVSMEa0014J01f Hordeum vulgare seedl... 36 3.3
gb|BF623133.2|BF623133 HVSMEa0014L06f Hordeum vulgare seedl... 36 3.3
gb|BF626162.2|BF626162 HVSMEa0016D05f Hordeum vulgare seedl... 36 3.3
gb|BF624463.2|BF624463 HVSMEa0016H10f Hordeum vulgare seedl... 36 3.3
gb|BF624550.2|BF624550 HVSMEa0017B15f Hordeum vulgare seedl... 36 3.3
gb|BG299673.1|BG299673 HVSMEa0021F15f Hordeum vulgare seedl... 36 3.3
gb|BF620874.3|BF620874 HVSMEa0003F24f Hordeum vulgare seedl... 36 3.3
gb|BF625655.3|BF625655 HVSMEa0013C06f Hordeum vulgare seedl... 36 3.3
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 36 3.3
gb|BG299530.2|BG299530 HVSMEa0020J16f Hordeum vulgare seedl... 36 3.3
gb|BE196330.1|BE196330 HVSMEh0092A04f Hordeum vulgare 5-45 ... 36 3.3
gb|BE603224.1|BE603224 HVSMEh0102J18f Hordeum vulgare 5-45 ... 36 3.3
>gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009J16f,
mRNA sequence
Length = 646
Score = 646 bits (326), Expect = 0.0
Identities = 553/629 (87%)
Strand = Plus / Plus
Query: 530 ttcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggct 589
||||||||| ||||||||||||| |||||||| |||||||||||||| || || || ||
Sbjct: 17 ttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcg 76
Query: 590 ccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcac 649
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 77 ccggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagcccgctgaagcac 136
Query: 650 tttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccac 709
|| ||||||| || ||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 137 ttcgggctgatgacccccggcctccgcggcgggatcctgggcctgggcggcgtgggccac 196
Query: 710 atgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtcc 769
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 197 atgggcgtgaaggtggccaagtccatgggccaccacgtgacggtgatcagctcgtccaac 256
Query: 770 aagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggac 829
|||||||| || ||||| ||||| |||| ||||| |||| |||||| || ||||| |||
Sbjct: 257 aagaagcgggccgaggccgtggacgacctgggcgccgacgagtacctcgtcagctccgac 316
Query: 830 gccgcggccatggcggcggccgccgactcgctggactacatcatcgacacggtgcccgtg 889
|||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 317 gccgaccagatggccgccgccgccgactcgctggactacatcatcgacaccgtgcccgtg 376
Query: 890 caccacccgctggagccgtacctggcgctgctgaagctggacggcaagctcgtgctgctg 949
| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||
Sbjct: 377 aagcacccgctggagccctacctggcgctgctcaagatggacggcaagctcgtgctgatg 436
Query: 950 ggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaaggcc 1009
||||| |||| ||||| || ||||||||||| || ||||||||||||||| ||||| ||
Sbjct: 437 ggcgtgatcgcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaagacc 496
Query: 1010 atcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctgcgtc 1069
|||||||||||||||||||| ||||| |||||||| | ||||| || |||||||||||
Sbjct: 497 atcacggggagcttcatcgggagcatggacgagacggaggaggtcctcaagttctgcgtc 556
Query: 1070 gacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctg 1129
||||||||||||||||| ||||||||||| |||||||||| ||||| ||| | |||||
Sbjct: 557 gacaaggggctcacctcgcagatcgaggtcgtcaagatggactacgtcaaccangcgctc 616
Query: 1130 gagcggctggagcgcaacgacgtccgcta 1158
||| ||| |||||||||||||| |||||
Sbjct: 617 gagaagctcgagcgcaacgacgtgcgcta 645
>gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017J24f, mRNA sequence
Length = 830
Score = 638 bits (322), Expect = 0.0
Identities = 535/605 (88%), Gaps = 1/605 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 93 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 152
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 153 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 212
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 213 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 272
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 273 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 332
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 333 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 392
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 393 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 452
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||| || || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 453 gcaaggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 512
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|| || || |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 513 cgggcttgcgccggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagccc 572
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcgg 699
|||||||||||| |||||| || ||| ||||| || ||||| | |||||||| |||||
Sbjct: 573 gctgaagcacttctggctgatgacccccggcctncgcggcgggaatctgggccttggcgg 632
Query: 700 cgtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcag 759
||||||||||||||||||||| || | ||| ||||||| ||||||||||||||||||||
Sbjct: 633 cgtgggccacatgggcgtgaa-gtgggcaaatccatggggcaccacgtgacggtgatcag 691
Query: 760 ctcgt 764
|||||
Sbjct: 692 ctcgt 696
>gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
5-PRIME, mRNA sequence
Length = 622
Score = 626 bits (316), Expect = e-178
Identities = 493/552 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 71 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 130
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 131 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 190
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 191 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 250
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 251 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 310
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 311 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 370
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 371 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 430
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 431 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 490
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|| || || |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 491 cgggcttgcgccggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagccc 550
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcgg 699
|||||||||||| ||||||| || ||| |||||||| ||||| ||||||||||| |||||
Sbjct: 551 gctgaagcacttcgggctgatgacccccggcctccgcggcgggatcctgggcctgggcgg 610
Query: 700 cgtgggccacat 711
||||||||||||
Sbjct: 611 cgtgggccacat 622
>gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I17f, mRNA sequence
Length = 723
Score = 611 bits (308), Expect = e-173
Identities = 533/604 (88%), Gaps = 3/604 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 97 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 156
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 157 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 216
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 217 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 276
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 277 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 336
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 337 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 396
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 397 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 456
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||| || || ||||||||| |||||| |||||| |||||||| | |||||||||||| ||
Sbjct: 457 gcaaggcggcttcgcctccgccatggccgtcgatcagaagttcggggtgaagatccccgc 516
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctgg-cgtgacggtgtacagcc 638
|| || || ||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 517 cgggcttgcgccggagcaagcggcgcccctgctgtgcgcgggccgtgacggtgtacagcc 576
Query: 639 cgctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcg 698
||||||||||||| ||||||| || ||| |||||||| ||||| ||||||||||| ||||
Sbjct: 577 cgctgaagcacttcgggctgaagacccccggcctccgcggcgggatcctgggcctgggcg 636
Query: 699 gcgtgggccacatgggcgtgaaggtagccaaggccatgggcc-accacgtgacggtgatc 757
||||||||||||||||| |||| || ||||| ||||||||| ||||| |||||| ||||
Sbjct: 637 gcgtgggccacatgggcctgaaagtggccaattccatgggccaaccac-tgacggggatc 695
Query: 758 agct 761
||||
Sbjct: 696 agct 699
>gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0085I24f, mRNA sequence
Length = 860
Score = 607 bits (306), Expect = e-172
Identities = 528/602 (87%)
Strand = Plus / Plus
Query: 443 tgcaaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtctac 502
|||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 16 tgcaaggcgaacgtcgagcagtactgcaacaataagatctggtcgtacaacgacgtctac 75
Query: 503 actgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaagttt 562
|| || || |||| |||||||| || ||||||||| ||||||||||||| ||||||||
Sbjct: 76 accgacggcaggccgacgcagggcggcttcgcctccgccatggtcgtcgatcagaagttc 135
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||||||||| || || || || |||||||| |||||||||||||||||||| |||
Sbjct: 136 gtggtgaagatccccgccgggcttgcgccggagcaggcggcgccgctgctgtgcgcgggc 195
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||||||||||||||| ||||||| || ||| |||||||| |||||
Sbjct: 196 gtgacggtgtacagcccgctgaagcacttcgggctgatgacccccggcctccgcggcggg 255
Query: 683 atcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggccac 742
||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 256 atcctgggcctgggcggcgtgggccacatgggcgtgaaggtggccaagtccatgggccac 315
Query: 743 cacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggc 802
||||||||||||||||||||||| ||||||||| || ||||| ||||| |||| |||
Sbjct: 316 cacgtgacggtgatcagctcgtccaacaagaagcgggccgaggccgtggacgacctgggc 375
Query: 803 gcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactcgctg 862
|| |||| |||||| || ||||| ||||||| ||||| || |||||||||||||||
Sbjct: 376 gccgacgagtacctcgtcagctccgacgccgaccagatggccgccgccgccgactcgctg 435
Query: 863 gactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctgctg 922
||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||
Sbjct: 436 gactacatcatcgacaccgtgcccgtgaagcacccgctggagccctacctggcgctgctc 495
Query: 923 aagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcg 982
||| |||||||||||||||||||| ||||||| |||| ||||| || | |||||||||
Sbjct: 496 aagatggacggcaagctcgtgctgatgggcgtgatcgcggagccgctcaacttcgtgtcc 555
Query: 983 cccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcgacgag 1042
|| |||| |||||||||| ||||| |||||||||||||||| |||| ||| | ||||||
Sbjct: 556 ccaatggggatgctggggaggaagaccatcacggggagctttctcgggagcctggacgag 615
Query: 1043 ac 1044
||
Sbjct: 616 ac 617
>gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20V 5',
mRNA sequence
Length = 699
Score = 563 bits (284), Expect = e-159
Identities = 496/560 (88%), Gaps = 5/560 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 102 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 161
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 162 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 221
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 222 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 281
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 282 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 341
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 342 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 401
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 402 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 461
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 462 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 521
Query: 580 gggtctggctccggagcaagcggcgccgctgc-tgtgcgctggcgtgacggtgtacagcc 638
|| || || |||||||| ||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 522 cgggcttgcgccggagcaggcggcgccgctgcttgtgcgcgggcgtgacggtgtacagcc 581
Query: 639 cgc-tgaagcactttgggctgacgaacccgggcctccgtgg-cggcatcct-gggcctcg 695
||| |||||||||| ||||||| || ||| |||||||| || ||| ||||| |||||| |
Sbjct: 582 cgcttgaagcacttcgggctgatgacccccggcctccgcggccgggatcctggggcctgg 641
Query: 696 gcggcgt-gggccacatggg 714
||||||| ||||||||||||
Sbjct: 642 gcggcgtggggccacatggg 661
>gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010O10f, mRNA sequence
Length = 740
Score = 557 bits (281), Expect = e-157
Identities = 477/541 (88%), Gaps = 1/541 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 107 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 166
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 167 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 226
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 227 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 286
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 287 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 346
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 347 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 406
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 407 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 466
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||| ||||||||| ||
Sbjct: 467 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggagaagatccccgc 526
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|| || || |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 527 cgggcttgcgccggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagccc 586
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggca-tcctgggcctcggcg 698
| |||||||||| |||||| || ||||||||| || || || | |||||||||| ||||
Sbjct: 587 gttgaagcacttgaggctgatgaccccgggccttcggggggggaatcctgggcctgggcg 646
Query: 699 g 699
|
Sbjct: 647 g 647
>gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_C15 5', mRNA sequence
Length = 578
Score = 541 bits (273), Expect = e-152
Identities = 432/485 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 94 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 153
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 154 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 213
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 214 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 273
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||
Sbjct: 274 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcagcgacgtggt 333
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 334 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 393
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 394 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 453
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 454 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 513
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|| || || |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 514 cgggcttgcgccggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagccc 573
Query: 640 gctga 644
|||||
Sbjct: 574 gctga 578
>gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
5-PRIME, mRNA sequence
Length = 554
Score = 502 bits (253), Expect = e-140
Identities = 406/457 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 98 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 157
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 158 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 217
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 218 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 277
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 278 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 337
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 338 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 397
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 398 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 457
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 458 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 517
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgc 616
|| || || |||||||| ||||||||||||||||||
Sbjct: 518 cgggcttgcgccggagcaggcggcgccgctgctgtgc 554
>gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P143 5-PRIME, mRNA sequence
Length = 620
Score = 502 bits (253), Expect = e-140
Identities = 446/505 (88%), Gaps = 5/505 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 92 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 151
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 152 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 211
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 212 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 271
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 272 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 331
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 332 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 391
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 392 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 451
Query: 520 gcagggtgg-attcgcctccaccatggtcgtcgaccagaagttt-gtggtgaagat-ccc 576
|||||| || ||||||||| ||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 452 gcagggcggctttcgcctccgccatggtcgtcgatcagaagtttcgtggtgaagatcccc 511
Query: 577 ggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacgg-tgtaca 635
| |||| || || ||||| || |||||||||||||||||||| |||||||||| ||||||
Sbjct: 512 gccgggncttgcgccggancaggcggcgccgctgctgtgcgcgggcgtgacggttgtaca 571
Query: 636 g-cccgctgaagcactttgggctga 659
| ||| ||||||||||| || ||||
Sbjct: 572 gccccnctgaagcacttcggnctga 596
>gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
3-PRIME, mRNA sequence
Length = 600
Score = 500 bits (252), Expect = e-140
Identities = 426/484 (88%)
Strand = Plus / Minus
Query: 706 ccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtc 765
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 600 ccacatgggcgtgaaggtggccaagtccatgggccaccacgtgacggtgatcagctcgtc 541
Query: 766 gtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctc 825
||||||||| || ||||| ||||| |||| ||||| |||| |||||| || |||||
Sbjct: 540 caacaagaagcgggccgaggccgtggacgacctgggcgccgacgagtacctcgtcagctc 481
Query: 826 ggacgccgcggccatggcggcggccgccgactcgctggactacatcatcgacacggtgcc 885
||||||| ||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 480 cgacgccgaccagatggccgccgccgccgactcgctggactacatcatcgacaccgtgcc 421
Query: 886 cgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagctcgtgct 945
|||| | |||||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 420 cgtgaagcacccgctggagccctacctggcgctgctcaagatggacggcaagctcgtgct 361
Query: 946 gctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaa 1005
| ||||||| |||| ||||| || ||||||||||| || ||||||||||||||| ||||
Sbjct: 360 gatgggcgtgatcgcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaa 301
Query: 1006 ggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctg 1065
| |||||||||||||||||||||| ||||| |||||||| | ||||| || |||||||
Sbjct: 300 gaccatcacggggagcttcatcgggagcatggacgagacggaggaggtcctcaagttctg 241
Query: 1066 cgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggc 1125
||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||
Sbjct: 240 cgtcgacaaggggctcacctcgcagatcgaggtcgtcaagatggactacgtcaaccaggc 181
Query: 1126 gctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtag 1185
||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 180 gctcgagaggctcgagcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgggag 121
Query: 1186 caac 1189
||||
Sbjct: 120 caac 117
>gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
3-PRIME, mRNA sequence
Length = 621
Score = 500 bits (252), Expect = e-140
Identities = 426/484 (88%)
Strand = Plus / Minus
Query: 706 ccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtc 765
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 ccacatgggcgtgaaggtggccaagtccatgggccaccacgtgacggtgatcagctcgtc 562
Query: 766 gtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctc 825
||||||||| || ||||| ||||| |||| ||||| |||| |||||| || |||||
Sbjct: 561 caacaagaagcgggccgaggccgtggacgacctgggcgccgacgagtacctcgtcagctc 502
Query: 826 ggacgccgcggccatggcggcggccgccgactcgctggactacatcatcgacacggtgcc 885
||||||| ||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 501 cgacgccgaccagatggccgccgccgccgactcgctggactacatcatcgacaccgtgcc 442
Query: 886 cgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagctcgtgct 945
|||| | |||||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 441 cgtgaagcacccgctggagccctacctggcgctgctcaagatggacggcaagctcgtgct 382
Query: 946 gctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaa 1005
| ||||||| |||| ||||| || ||||||||||| || ||||||||||||||| ||||
Sbjct: 381 gatgggcgtgatcgcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaa 322
Query: 1006 ggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctg 1065
| |||||||||||||||||||||| ||||| |||||||| | ||||| || |||||||
Sbjct: 321 gaccatcacggggagcttcatcgggagcatggacgagacggaggaggtcctcaagttctg 262
Query: 1066 cgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggc 1125
||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||
Sbjct: 261 cgtcgacaaggggctcacctcgcagatcgaggtcgtcaagatggactacgtcaaccaggc 202
Query: 1126 gctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtag 1185
||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 201 gctcgagaggctcgagcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgggag 142
Query: 1186 caac 1189
||||
Sbjct: 141 caac 138
>gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021M09f, mRNA sequence
Length = 539
Score = 498 bits (251), Expect = e-139
Identities = 406/458 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 81 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 140
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 141 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 200
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| | ||||| |||||||| |||||||| ||||| |||||
Sbjct: 201 ccaccaggtcaagaacgacctgngtgcttccaagtatcccatggtcccagggcatgaggt 260
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 261 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 320
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 321 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 380
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 381 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 440
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 441 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 500
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcg 617
|| || || |||||||| |||||||||||||||||||
Sbjct: 501 cgggcttgcgccggagcaggcggcgccgctgctgtgcg 538
>gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
5-PRIME, mRNA sequence
Length = 558
Score = 494 bits (249), Expect = e-138
Identities = 402/453 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 106 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 165
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 166 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 225
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 226 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 285
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 286 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 345
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 346 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 405
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 406 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 465
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
|||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 466 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgc 525
Query: 580 gggtctggctccggagcaagcggcgccgctgct 612
|| || || |||||||| ||||||||||||||
Sbjct: 526 cgggcttgcgccggagcaggcggcgccgctgct 558
>gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17T 5',
mRNA sequence
Length = 538
Score = 472 bits (238), Expect = e-131
Identities = 414/469 (88%), Gaps = 3/469 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 70 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 129
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 130 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 189
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 190 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 249
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 250 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 309
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 310 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 369
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 370 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 429
Query: 520 gcagggtggattcgcctccaccatggtcgtcga-ccagaagtttgtggtg-aagatcccg 577
|||||| || ||||||||| ||||||||||||| | ||||||| |||||| ||||||||
Sbjct: 430 gcagggcggcttcgcctccgccatggtcgtcgatcaagaagttcgtggtgaaagatcccc 489
Query: 578 gcgggtctggctccggagcaagcggcg-ccgctgctgtgcgctggcgtg 625
|| || || || |||||||| |||||| |||||||||||||| ||||||
Sbjct: 490 gccgggcttgcgccggagcangcggcgcccgctgctgtgcgcgggcgtg 538
>gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019K10f, mRNA sequence
Length = 837
Score = 470 bits (237), Expect = e-131
Identities = 495/573 (86%), Gaps = 6/573 (1%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||
Sbjct: 96 cgggtgggccgccagggacgccaccggccacctcttcccctacacatacaccctcaggaa 155
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|||||||||||| |||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 156 aacaggccctgaaaatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 215
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| |||| |||||
Sbjct: 216 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccaaggcatgaggt 275
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 276 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 335
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 336 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 395
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 396 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 455
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagat-cccgg 578
|||||| || ||||||||| ||||||||||||| |||||||| ||||||||||| ||| |
Sbjct: 456 gcagggcggcttcgcctccgccatggtcgtcgatcagaagttcgtggtgaagatcccccg 515
Query: 579 cgggtctggctccggagcaagcggcgccgctgctgtgcgctgg-cgtgacggtgtacagc 637
| || || | ||||||||||||||||||||||||||||| || |||||||| ||||| |
Sbjct: 516 ccgg-ctttcgccggagcaagcggcgccgctgctgtgcgcgggccgtgacgg-gtacaac 573
Query: 638 ccgc-tgaagcactttgggctgacgaa-cccgggcctccgtggcggcatcctgggcctcg 695
|| | |||| ||||| |||||| ||| ||| |||| || || || | ||||||||| |
Sbjct: 574 ccccttgaacaacttttggctgatgaaccccccgccttcgcggggggaacctgggcctgg 633
Query: 696 gcggcgtgggccacatgggcgtgaaggtagcca 728
|||| |||||||| |||||| ||||||| ||||
Sbjct: 634 gcggggtgggccaaatgggcctgaaggtggcca 666
>gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_D14 5', mRNA sequence
Length = 428
Score = 468 bits (236), Expect = e-130
Identities = 380/428 (88%)
Strand = Plus / Plus
Query: 292 gaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggtggtcggcgaggt 351
|||| |||| || ||||| |||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 1 gaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggt 60
Query: 352 ggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggtaggcgtcggggt 411
||||||||||||||| || ||| ||||||| |||||||||||||||| ||||| |||||
Sbjct: 61 ggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggt 120
Query: 412 gatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgcaa 471
|||||| |||||||||||||| ||| | || |||||||| ||||| ||||||||||||||
Sbjct: 121 gatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcgagcagtactgcaa 180
Query: 472 caagaagatctggtcatacaacgacgtctacactgatggacggcccacgcagggtggatt 531
||||||||||||||| | ||||||||||||||| || || |||| |||||||| || ||
Sbjct: 181 caagaagatctggtcgttcaacgacgtctacaccgacggcaggccgacgcagggcggctt 240
Query: 532 cgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctcc 591
||||||| ||||||||||||| |||||||| |||||||||||||| || || || || ||
Sbjct: 241 cgcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgcc 300
Query: 592 ggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcactt 651
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 ggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagcccgctgaagcactt 360
Query: 652 tgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacat 711
||||||| || ||| |||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 361 cgggctgatgacccccggcctccgcggcgggatcctgggcctgggcggcgtgggccacat 420
Query: 712 gggcgtga 719
||||||||
Sbjct: 421 gggcgtga 428
>gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012M15f, mRNA sequence
Length = 745
Score = 446 bits (225), Expect = e-123
Identities = 361/405 (89%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 353 gtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggtaggcgtcggggtg 412
|||||||||||||| || ||| ||||||| |||||||||||||||| ||||| ||||||
Sbjct: 190 gtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggtcggcgtgggggtg 249
Query: 413 atcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgcaac 472
||||| |||||||||||||| ||| || |||||||| ||||| |||||||||||||||
Sbjct: 250 atcgtggggtgctgccgcgactgcccgccgtgcaaggcgaacgtagagcagtactgcaac 309
Query: 473 aagaagatctggtcatacaacgacgtctacactgatggacggcccacgcagggtggattc 532
|||||||||||||| ||||||||||||||||| || || |||| |||||||| || |||
Sbjct: 310 aagaagatctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttc 369
Query: 533 gcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctccg 592
|||||| ||||||||||||| |||||||| |||||||||||||| || || || || |||
Sbjct: 370 gcctccgccatggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccg 429
Query: 593 gagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcacttt 652
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 430 gagcatgcggcgccgctgctgtgcgcgggcgtgacggtgtacagcccgctgaagcactta 489
Query: 653 gggctga-cgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacat 711
||||||| || ||| |||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 490 gggctgattgacccccggcctccggggcgggatcctgggcctgggcggcgtgggccacat 549
Query: 712 gggcgtgaaggtagccaaggccatgggccaccacgtgacggtgat 756
||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 550 gggcgtgaaagtggccaagtccatgggccaccacgtgacggtgat 594
>gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV13A16
5-PRIME, mRNA sequence
Length = 501
Score = 438 bits (221), Expect = e-121
Identities = 350/393 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 108 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 167
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 168 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 227
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 228 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 287
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 288 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 347
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 348 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 407
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 408 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 467
Query: 520 gcagggtggattcgcctccaccatggtcgtcga 552
|||||| || ||||||||| |||||||||||||
Sbjct: 468 gcagggcggcttcgcctccgccatggtcgtcga 500
>gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014I18f, mRNA sequence
Length = 671
Score = 432 bits (218), Expect = e-119
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 99 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 158
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 159 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 218
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 219 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 278
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 279 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 338
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 339 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 398
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||| ||||||| || || |||| ||
Sbjct: 399 gcagtactgcaacaagaagatctggtcgtacaacgacatctacaccgacggcaggccgac 458
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtt 561
|||||| || ||||||||| |||||||| |||| ||||||||
Sbjct: 459 gcagggcggcttcgcctccgccatggtcctcgatcagaagtt 500
>gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
5-PRIME, mRNA sequence
Length = 469
Score = 414 bits (209), Expect = e-114
Identities = 335/377 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 93 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 152
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 153 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 212
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 213 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 272
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 273 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 332
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 333 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 392
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 393 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 452
Query: 520 gcagggtggattcgcct 536
|||||| || |||||||
Sbjct: 453 gcagggcggcttcgcct 469
>gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
3-PRIME, mRNA sequence
Length = 579
Score = 410 bits (207), Expect = e-113
Identities = 366/419 (87%)
Strand = Plus / Minus
Query: 771 agaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggacg 830
||||||| || ||||| ||||| |||| ||||| |||| |||||| || ||||| ||||
Sbjct: 579 agaagcgggccgaggccgtggacgacctgggcgccgacgagtacctcgtcagctccgacg 520
Query: 831 ccgcggccatggcggcggccgccgactcgctggactacatcatcgacacggtgcccgtgc 890
||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 519 ccgaccagatggccgccgccgccgactcgctggactacatcatcgacaccgtgcccgtga 460
Query: 891 accacccgctggagccgtacctggcgctgctgaagctggacggcaagctcgtgctgctgg 950
| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 459 agcacccgctggagccctacctggcgctgctcaagatggacggcaagctcgtgctgatgg 400
Query: 951 gcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaaggcca 1010
|||| |||| ||||| || ||||||||||| || ||||||||||||||| ||||| |||
Sbjct: 399 gcgtgatcgcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaagacca 340
Query: 1011 tcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctgcgtcg 1070
||||||||||||||||||| ||||| |||||||| | ||||| || ||||||||||||
Sbjct: 339 tcacggggagcttcatcgggagcatggacgagacggaggaggtcctcaagttctgcgtcg 280
Query: 1071 acaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctgg 1130
|||||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||| |
Sbjct: 279 acaaggggctcacctcgcagatcgaggtcgtcaagatggactacgtcaaccaggcgctcg 220
Query: 1131 agcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
|| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 219 agaggctcgagcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 161
>gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
5-PRIME, mRNA sequence
Length = 439
Score = 408 bits (206), Expect = e-112
Identities = 326/366 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 71 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 130
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 131 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 190
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 191 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 250
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 251 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 310
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 311 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 370
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||||||||||||| ||||||||||||||||| || || |||| ||
Sbjct: 371 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacaccgacggcaggccgac 430
Query: 520 gcaggg 525
||||||
Sbjct: 431 gcaggg 436
>gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
5-PRIME, mRNA sequence
Length = 529
Score = 406 bits (205), Expect = e-112
Identities = 310/345 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 169 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 228
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 229 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 288
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 289 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 348
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 349 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggt 408
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| ||
Sbjct: 409 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgtcga 468
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacac 504
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 469 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 513
>gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. vulgare cDNA clone HM03H06
3-PRIME, mRNA sequence
Length = 486
Score = 402 bits (203), Expect = e-110
Identities = 314/351 (89%)
Strand = Plus / Minus
Query: 839 atggcggcggccgccgactcgctggactacatcatcgacacggtgcccgtgcaccacccg 898
||||| || |||||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 467 atggccgccgccgccgactcgctggactacatcatcgacaccgtgcccgtgaagcacccg 408
Query: 899 ctggagccgtacctggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatc 958
|||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| |||
Sbjct: 407 ctggagccctacctggcgctgctcaagatggacggcaagctcgtgctgatgggcgtgatc 348
Query: 959 ggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaaggccatcacgggg 1018
| ||||| || ||||||||||| || ||||||||||||||| ||||| |||||||||||
Sbjct: 347 gcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaagaccatcacgggg 288
Query: 1019 agcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctgcgtcgacaagggg 1078
||||||||||| ||||| |||||||| | ||||| || ||||||||||||||||||||
Sbjct: 287 agcttcatcgggagcatggacgagacggaggaggtcctcaagttctgcgtcgacaagggg 228
Query: 1079 ctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctg 1138
|||||||| ||||||||||| |||||||||| ||||| ||| ||||||| ||| ||||
Sbjct: 227 ctcacctcgcagatcgaggtcgtcaagatggactacgtcaaccaggcgctcgagaggctc 168
Query: 1139 gagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
|||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 167 gagcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 117
>gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
3-PRIME, mRNA sequence
Length = 524
Score = 402 bits (203), Expect = e-110
Identities = 314/351 (89%)
Strand = Plus / Minus
Query: 839 atggcggcggccgccgactcgctggactacatcatcgacacggtgcccgtgcaccacccg 898
||||| || |||||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 488 atggccgccgccgccgactcgctggactacatcatcgacaccgtgcccgtgaagcacccg 429
Query: 899 ctggagccgtacctggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatc 958
|||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| |||
Sbjct: 428 ctggagccctacctggcgctgctcaagatggacggcaagctcgtgctgatgggcgtgatc 369
Query: 959 ggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaaggccatcacgggg 1018
| ||||| || ||||||||||| || ||||||||||||||| ||||| |||||||||||
Sbjct: 368 gcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaagaccatcacgggg 309
Query: 1019 agcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctgcgtcgacaagggg 1078
||||||||||| ||||| |||||||| | ||||| || ||||||||||||||||||||
Sbjct: 308 agcttcatcgggagcatggacgagacggaggaggtcctcaagttctgcgtcgacaagggg 249
Query: 1079 ctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctg 1138
|||||||| ||||||||||| |||||||||| ||||| ||| ||||||| ||| ||||
Sbjct: 248 ctcacctcgcagatcgaggtcgtcaagatggactacgtcaaccaggcgctcgagaggctc 189
Query: 1139 gagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
|||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 188 gagcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 138
>gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007J20f,
mRNA sequence
Length = 876
Score = 398 bits (201), Expect = e-109
Identities = 387/449 (86%)
Strand = Plus / Plus
Query: 718 gaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtccaagaagcg 777
|||||| |||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1 gaaggtggccaagtccatgggccaccacgtgacggtgatcagctcgtccaacaggaagcg 60
Query: 778 cgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggacgccgcggc 837
|| ||||| ||||| |||| ||||| |||| |||||| || ||||| |||||||
Sbjct: 61 ggccgaggccgtggacgacctgggcgccgacgagtacctcgtcagctccgacgccgacca 120
Query: 838 catggcggcggccgccgactcgctggactacatcatcgacacggtgcccgtgcaccaccc 897
||||| || |||||||||||||||||||||||||||||||| ||||||||| | |||||
Sbjct: 121 gatggccgccgccgccgactcgctggactacatcatcgacaccgtgcccgtgaagcaccc 180
Query: 898 gctggagccgtacctggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcat 957
||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| ||
Sbjct: 181 gctggagccctacctggcgctgctcaagatggacggcaagctcgtgctgatgggcgtgat 240
Query: 958 cggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcggaaggccatcacggg 1017
|| ||||| || ||||||||||| || ||||||||||||||| ||||| ||||||||||
Sbjct: 241 cgcggagccgctcagcttcgtgtccccaatggtgatgctggggaggaagaccatcacggg 300
Query: 1018 gagcttcatcggcagcatcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggg 1077
|||||||||||| ||||| |||||||| | ||||| || |||||||||||||||||||
Sbjct: 301 gagcttcatcgggagcatggacgagacggaggaggtcctcaagttctgcgtcgacaaggg 360
Query: 1078 gctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggct 1137
||||||||| |||||| | || |||||||||| ||||| ||| | ||||| ||| ||||
Sbjct: 361 gctcacctcgcagatctatgtcgtcaagatggactacgtcaaccatgcgctcgagaggct 420
Query: 1138 ggagcgcaacgacgtccgctaccgcttcg 1166
|||||||||||||| |||||||| ||||
Sbjct: 421 cgagcgcaacgacgtgcgctaccggttcg 449
>gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008C08f, mRNA sequence
Length = 651
Score = 394 bits (199), Expect = e-108
Identities = 370/425 (87%), Gaps = 2/425 (0%)
Strand = Plus / Plus
Query: 530 ttcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggct 589
||||||||| || |||||||||| |||||||| |||||||||||||| || || || |||
Sbjct: 14 ttcgcctccgcc-tggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgct 72
Query: 590 -ccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 73 gccggagcaggcggcgccgctgctgtgcgcgggcgtgacggtgtacagcccgctgaagca 132
Query: 649 ctttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggcca 708
||| ||||||| || ||| |||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 133 cttcgggctgatgacccccggcctccgcggcgggatcctgggcctgggcggcgtgggcca 192
Query: 709 catgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtc 768
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 193 catgggcgtgaaggtggccaagtccatgggccaccacgtgacggtgatcagctcgtccaa 252
Query: 769 caagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcgga 828
||||||||| || ||||| ||||| |||| |||| |||| |||||| || ||||| ||
Sbjct: 253 caagaagcgggccgaggccgtggacgacctgngcgccgacgagtacctcgtcagctccga 312
Query: 829 cgccgcggccatggcggcggccgccgactcgctggactacatcatcgacacggtgcccgt 888
||||| ||||| || |||||||||||||||||||||| |||||||| | ||||||
Sbjct: 313 cgccgaccagatggccgccgccgccgactcgctggactacaatatcgacaccgngcccgt 372
Query: 889 gcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagctcgtgctgct 948
| | || |||||||| || |||||||||||||| ||| |||||||||||||| ||||| |
Sbjct: 373 gaagcaaccgctggaaccctacctggcgctgctcaagatggacggcaagctcatgctgat 432
Query: 949 gggcg 953
|||||
Sbjct: 433 gggcg 437
>gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_D11 5', mRNA sequence
Length = 434
Score = 367 bits (185), Expect = e-100
Identities = 305/345 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 86 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 145
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| |||||| |||||||| || ||||||||||||||
Sbjct: 146 aacaggccctgaagatgtggtgttgaagggtaaatactgcggcatttgccacacggacat 205
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| |||| || ||
Sbjct: 206 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccacggcatgaagt 265
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 266 ggttggcgaagtggtggaggtcgggcccgaagtgagcaagtaccgcgtcggcgacatggt 325
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| ||||||||||| |||||||||||| | ||| | || ||||| || ||||| ||
Sbjct: 326 cggcgtgggggtgatcgtggggtgctgccgccactgccggccgtgcaaagcgaacgtcga 385
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacac 504
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 386 gcagtactgcaacaagaagatctggtcgtacaacgacgtctacac 430
>gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007N14f, mRNA sequence
Length = 849
Score = 359 bits (181), Expect = 2e-097
Identities = 304/345 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 84 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 143
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 144 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 203
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 204 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 263
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| |||||||||||||| |||||||| || ||| |||||||| ||||||||||||||||
Sbjct: 264 ggttggcgaggtggtggaagtcgggccggaggtgaccaagtaccgcgtcggcgacgtggt 323
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
||||| |||||||||| |||||||||||||| ||||| || ||||| || ||||| ||
Sbjct: 324 cggcgtgggggtgatcgcggggtgctgccgcgactgcaggccgtgcaaagcgaacgtcga 383
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacac 504
|||||||||| || ||||||||| | |||||||||||||||||
Sbjct: 384 ccagtactgcagcaccaagatctgggcgtacaacgacgtctacac 428
>gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20u 3',
mRNA sequence
Length = 474
Score = 329 bits (166), Expect = 2e-088
Identities = 271/307 (88%)
Strand = Plus / Minus
Query: 883 gcccgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagctcgt 942
||||||| | |||||||||||||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 474 gcccgtgaagcacccgctggagccnnacctggcgctgctcaagatggacggcaagctcgt 415
Query: 943 gctgctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggggcg 1002
|||| ||||||| |||| ||||| || || |||||||| || ||||||||||||||| |
Sbjct: 414 gctgatgggcgtgatcgcggagccgctaagnttcgtgtccccaatggtgatgctggggag 355
Query: 1003 gaaggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttcagtt 1062
|||| |||||||||||||||||||||| ||||| |||||||| | ||||| || ||||
Sbjct: 354 gaagaccatcacggggagcttcatcgggagcatggacgagacggaggaggtcctcaagtt 295
Query: 1063 ctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaacga 1122
|||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||| |
Sbjct: 294 ctgcgtcgacaaggggctcacctcgcagatcgaggtcgtcaagatggactacgtcaacca 235
Query: 1123 ggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccgg 1182
|||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 234 ggcgctcgagaggctcgagcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgg 175
Query: 1183 tagcaac 1189
||||||
Sbjct: 174 gagcaac 168
>gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
3-PRIME, mRNA sequence
Length = 525
Score = 313 bits (158), Expect = 9e-084
Identities = 251/282 (89%)
Strand = Plus / Minus
Query: 908 tacctggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagccc 967
|||||||||||||| ||| |||||||||||||||||||| ||||||| |||| |||||
Sbjct: 521 tacctggcgctgctcaagatggacggcaagctcgtgctgatgggcgtgatcgcggagccg 462
Query: 968 ctgagcttcgtgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatc 1027
|| ||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 461 ctcagcttcgtgtccccaatggtgatgctggggaggaagaccatcacggggagcttcatc 402
Query: 1028 ggcagcatcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcc 1087
|| ||||| |||||||| | ||||| || ||||||||||||||||||||||||||||
Sbjct: 401 gggagcatggacgagacggaggaggtcctcaagttctgcgtcgacaaggggctcacctcg 342
Query: 1088 cagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaac 1147
||||||||||| |||||||||| ||||| ||| ||||||| ||| |||| |||||||||
Sbjct: 341 cagatcgaggtcgtcaagatggactacgtcaaccaggcgctcgagaggctcgagcgcaac 282
Query: 1148 gacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 281 gacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 240
>gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H236 5-PRIME, mRNA sequence
Length = 509
Score = 309 bits (156), Expect = 1e-082
Identities = 249/280 (88%)
Strand = Plus / Plus
Query: 910 cctggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccct 969
|||||||||||| ||| |||||||||||||||||||| ||||||| |||| ||||| ||
Sbjct: 1 cctggcgctgctcaagatggacggcaagctcgtgctgatgggcgtgatcgcggagccgct 60
Query: 970 gagcttcgtgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcgg 1029
||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 61 cagcttcgtgtccccaatggtgatgctggggaggaagaccatcacggggagcttcatcgg 120
Query: 1030 cagcatcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctccca 1089
||||| |||||||| | ||||| || |||||||||||||||||||||||||||| ||
Sbjct: 121 gagcatggacgagacggaggaggtcctcaagttctgcgtcgacaaggggctcacctcgca 180
Query: 1090 gatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacga 1149
||||||||| |||||||||| ||||| ||| ||||||| ||| |||| |||||||||||
Sbjct: 181 gatcgaggtcgtcaagatggactacgtcaaccaggcgctcgagaggctcgagcgcaacga 240
Query: 1150 cgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 241 cgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 280
>gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_F09 5', mRNA sequence
Length = 240
Score = 285 bits (144), Expect = 2e-075
Identities = 216/240 (90%)
Strand = Plus / Plus
Query: 480 tctggtcatacaacgacgtctacactgatggacggcccacgcagggtggattcgcctcca 539
||||||| ||||||||||||||||| || || |||| |||||||| || |||||||||
Sbjct: 1 tctggtcgtacaacgacgtctacaccgacggcaggccgacgcagggcggcttcgcctccg 60
Query: 540 ccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctccggagcaag 599
||||||||||||| |||||||| |||||||||||||| || || || || ||||||||||
Sbjct: 61 ccatggtcgtcgatcagaagttcgtggtgaagatccccgccgggcttgcgccggagcaag 120
Query: 600 cggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcactttgggctga 659
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 cggcgccgctgctgtgcgcgggcgtgacggtgtacagcccgctgaagcacttcgggctga 180
Query: 660 cgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacatgggcgtga 719
|| ||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 181 tgacccccggcctccgcggcgggatcctgggcctgggcggcgtgggccacatgggcgtga 240
>gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025G15f, mRNA sequence
Length = 837
Score = 281 bits (142), Expect = 3e-074
Identities = 226/254 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 94 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 153
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 154 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 213
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 214 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 273
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||| ||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||
Sbjct: 274 ggttggcgaggtggtggaggtcgggccggaggtgatcaagtaccgcgtctgcgacgtggt 333
Query: 400 aggcgtcggggtga 413
||||| |||||||
Sbjct: 334 cggcgtgggggtga 347
>gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G08V 5',
mRNA sequence
Length = 365
Score = 274 bits (138), Expect = 8e-072
Identities = 227/258 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||
Sbjct: 105 cgggtgggccgccagggacgccaccggccacctntccccctacacatacaccctnaggaa 164
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 165 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 224
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 225 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 284
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
|| ||||||||||||||||||||||| || ||| ||||||| || |||||||||||||
Sbjct: 285 ggntggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcntcggcgacgtggt 344
Query: 400 aggcgtcggggtgatcgt 417
||||| |||||||||||
Sbjct: 345 cggcgtgggggtgatcgt 362
>gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17u 3',
mRNA sequence
Length = 443
Score = 228 bits (115), Expect = 4e-058
Identities = 180/202 (89%)
Strand = Plus / Minus
Query: 988 ggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcgacgagaccgc 1047
||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||| |
Sbjct: 443 ggtgatgctggggaggaagaccatcacggggagcttcatcgggagcatggacgagacgga 384
Query: 1048 tgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagat 1107
||||| || |||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 383 ggaggtcctcaagttntgcgtcgacaaggggctcacctcgcagatcgaggtcgtcaagat 324
Query: 1108 ggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgt 1167
|| ||||| ||| ||||||| ||| |||| |||||||||||||| ||||||||||||||
Sbjct: 323 ggactacgtcaaccaggcgctcgagaggctcgagcgcaacgacgtgcgctaccgcttcgt 264
Query: 1168 cgtcgacgtcgccggtagcaac 1189
||||||||||||||| ||||||
Sbjct: 263 cgtcgacgtcgccgggagcaac 242
>gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018J01f, mRNA sequence
Length = 707
Score = 228 bits (115), Expect = 4e-058
Identities = 232/267 (86%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 221 acaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacatc 280
|||||||||||||| |||||| ||||||| |||||||| || |||||||||||||||
Sbjct: 5 acaggccctgaaga-gtggtgttgaaggttaaatactgcggcatttgccacacggacatc 63
Query: 281 caccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggtg 340
||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| ||||||
Sbjct: 64 caccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggtg 123
Query: 341 gtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggta 400
|| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct: 124 gttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcgacgtggtc 183
Query: 401 ggcgt-cggggtgatcgt-tgggtgctgccgcgagtgcagcccctgcaaggccaacgttg 458
||||| ||||||||||| |||||||||||| | ||| | || |||||||| ||||| |
Sbjct: 184 ggcgtggggggtgatcgtgggggtgctgccgcaactgccggccgtgcaaggcgaacgtcg 243
Query: 459 agcagtactgcaacaagaagatctggt 485
|||||||||||| ||||||||||||||
Sbjct: 244 agcagtactgcaccaagaagatctggt 270
>gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ001_M10 5', mRNA sequence
Length = 252
Score = 198 bits (100), Expect = 4e-049
Identities = 151/168 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 85 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 144
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 145 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 204
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccc 327
|||||||| ||||||| |||| || ||||| |||||||| ||||||||
Sbjct: 205 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 252
>gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_H14 5', mRNA sequence
Length = 279
Score = 180 bits (91), Expect = 9e-044
Identities = 160/183 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||
Sbjct: 94 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaagaa 153
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
||||||||||||||||||||| |||| || |||||||| || ||||| ||||||||
Sbjct: 154 aacaggccctgaagatgtggtgttgaaagttaaatactgcggcatttgccatacggacat 213
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| || ||
Sbjct: 214 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaagt 273
Query: 340 ggt 342
|||
Sbjct: 274 ggt 276
>gb|BE602616.3|BE602616 HVSMEh0100I13f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0100I13f, mRNA sequence
Length = 423
Score = 123 bits (62), Expect = 2e-026
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 1088 cagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaac 1147
||||||||||| |||||||||| ||||| ||| ||||||| ||| |||| |||||||||
Sbjct: 8 cagatcgaggtcgtcaagatggactacgtcaaccaggcgctcgagaggctcgagcgcaac 67
Query: 1148 gacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 68 gacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 109
>gb|BQ661990.1|BQ661990 HR01B24u HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
3-PRIME, mRNA sequence
Length = 133
Score = 117 bits (59), Expect = 1e-024
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 1076 gggctcacctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcgg 1135
||||||||||| ||||| ||||| |||||||||| ||||| ||| ||||||| || ||
Sbjct: 133 gggctcacctcgcagatngaggtcgtcaagatggaatacgtcaaccaggcgctctagagg 74
Query: 1136 ctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
|| ||||||||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 73 ctcgagcgcaactacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 20
>gb|BM097022.2|BM097022 EBpi07_SQ002_C11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_C11 5', mRNA sequence
Length = 322
Score = 99.6 bits (50), Expect = 3e-019
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1112 tacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtc 1171
||||| ||| ||||||| ||| |||| |||||||||||||| ||||||||||||||||||
Sbjct: 2 tacgtcaaccaggcgctcgagaggctcgagcgcaacgacgtgcgctaccgcttcgtcgtc 61
Query: 1172 gacgtcgccggtagcaac 1189
||||||||||| ||||||
Sbjct: 62 gacgtcgccgggagcaac 79
>gb|BE213985.3|BE213985 HV_CEb0001N07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001N07f, mRNA sequence
Length = 276
Score = 77.8 bits (39), Expect = 1e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 1143 gcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaac 1189
|||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 276 gcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgggagcaac 230
>gb|AV917273.1|AV917273 AV917273 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d14 5', mRNA sequence
Length = 546
Score = 75.8 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 311 gcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgg 352
Score = 46.1 bits (23), Expect = 0.003
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 860 ctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctg 919
||||||||| | |||||||||||| | | ||| ||| |||||| ||| ||||| ||||
Sbjct: 30 ctggactacgtgatcgacacggtgtcggcgcagcactcgctggggcccatcctggagctg 89
Query: 920 ctgaagctggacggcaagctcgtgctg 946
|| ||| || |||||||||| ||||||
Sbjct: 90 ctcaaggtgaacggcaagctggtgctg 116
>gb|AV922443.1|AV922443 AV922443 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d14 3', mRNA sequence
Length = 520
Score = 75.8 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 238 gcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgg 197
Score = 46.1 bits (23), Expect = 0.003
Identities = 71/87 (81%)
Strand = Plus / Minus
Query: 860 ctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctg 919
||||||||| | |||||||||||| | | ||| ||| |||||| ||| ||||| ||||
Sbjct: 519 ctggactacgtgatcgacacggtgtcggcgcagcactcgctggggcccatcctggagctg 460
Query: 920 ctgaagctggacggcaagctcgtgctg 946
|| ||| || |||||||||| ||||||
Sbjct: 459 ctcaaggtgaacggcaagctggtgctg 433
>gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. vulgare cDNA clone HP02P10
3-PRIME, mRNA sequence
Length = 667
Score = 75.8 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 242 gcgcaacgacgtgcgctaccgcttcgtcgtcgacgtcgccgg 201
Score = 46.1 bits (23), Expect = 0.003
Identities = 71/87 (81%)
Strand = Plus / Minus
Query: 860 ctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctg 919
||||||||| | |||||||||||| | | ||| ||| |||||| ||| ||||| ||||
Sbjct: 523 ctggactacgtgatcgacacggtgtcggcgcagcactcgctggggcccatcctggagctg 464
Query: 920 ctgaagctggacggcaagctcgtgctg 946
|| ||| || |||||||||| ||||||
Sbjct: 463 ctcaaggtgaacggcaagcttgtgctg 437
>gb|BI949722.1|BI949722 HVSMEl0015I24f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0015I24f, mRNA sequence
Length = 561
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 164 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggagaagaacgacg 223
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 224 tgaggtaccgcttcgtcatcgacgtcgccgg 254
>gb|BG310264.2|BG310264 HVSMEc0016L11f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0016L11f, mRNA sequence
Length = 758
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 454 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggagaagaacgacg 395
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 394 tgaggtaccgcttcgtcatcgacgtcgccgg 364
>gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0012A06f, mRNA sequence
Length = 852
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||||||| |||| | |||||||||||| |||||||
Sbjct: 393 tcgaggtcgtcaagatggactacgtgaacacggcggtcgagcggctggagaagaacgacg 452
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | ||||||||||| |||||||||||||
Sbjct: 453 tgagggaccgcttcgtcatcgacgtcgccgg 483
Score = 42.1 bits (21), Expect = 0.053
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcg 811
||||||||||||||| | | |||||||| |||||| | || | ||||||||| ||||||
Sbjct: 53 gtgatcagctcgtcgccgaggaagcgcgaggaggcgctcgagcgcctcggcgccgacgcg 112
Query: 812 t 812
|
Sbjct: 113 t 113
>gb|AV913778.1|AV913778 AV913778 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e03 5', mRNA sequence
Length = 497
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| || |||| | |||||||||||| | |||||||
Sbjct: 135 tcgaggtcgtcaagatggactacgtcaatacggcggtcgagcggctggagaggaacgacg 194
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 195 tgagataccgcttcgtcatcgacgtcgccgg 225
>gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1g09 5', mRNA sequence
Length = 616
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 408 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggagaagaacgacg 467
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 468 tgaggtaccgcttcgtcatcgacgtcgccgg 498
Score = 42.1 bits (21), Expect = 0.053
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcg 811
||||||||||||||| | | |||||||| |||||| | || | ||||||||| ||||||
Sbjct: 68 gtgatcagctcgtcgccgaggaagcgcgaggaggcgctcgagcgcctcggcgccgacgcg 127
Query: 812 t 812
|
Sbjct: 128 t 128
>gb|AV921205.1|AV921205 AV921205 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1g09 3', mRNA sequence
Length = 550
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 376 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggagaagaacgacg 317
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 316 tgaggtaccgcttcgtcatcgacgtcgccgg 286
>gb|AV921385.1|AV921385 AV921385 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e03 3', mRNA sequence
Length = 573
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| || |||| | |||||||||||| | |||||||
Sbjct: 457 tcgaggtcgtcaagatggactacgtcaatacggcggtcgagcggctggagaggaacgacg 398
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 397 tgagataccgcttcgtcatcgacgtcgccgg 367
>gb|BQ467844.1|BQ467844 HR01B18r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B18
5-PRIME, mRNA sequence
Length = 480
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 59 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggagaagaacgacg 118
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 119 tgaggtaccgcttcgtcatcgacgtcgccgg 149
>gb|CA001190.1|CA001190 HS05A02u HS Hordeum vulgare subsp. vulgare cDNA clone HS05A02
3-PRIME, mRNA sequence
Length = 513
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 238 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggagaagaacgacg 179
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 178 tgaggtaccgcttcgtcatcgacgtcgccgg 148
>gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005J24f, mRNA sequence
Length = 595
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 98 gcggcgccgctgctctgcgccggcgtcacggtgtacagcccg 139
Score = 42.1 bits (21), Expect = 0.053
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcg 811
||||||||||||||| | | |||||||| |||||| | || | ||||||||| ||||||
Sbjct: 251 gtgatcagctcgtcgccgaggaagcgcgaggaggcgctcgagcgcctcggcgccgacgcg 310
Query: 812 t 812
|
Sbjct: 311 t 311
>gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012L22f, mRNA sequence
Length = 538
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 484 gcggcgccgctgctctgcgccggcgtcacggtgtacagcccg 525
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 130 aaggtgctcttctgcgggatctgccacaccgacctcca 167
>gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0002B16f, mRNA sequence
Length = 829
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 600 gcggcgccgctgctctgcgccggcgtcacggtgtacagcccg 641
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 246 aaggtgctcttctgcgggatctgccacaccgacctcca 283
>gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010L07f, mRNA sequence
Length = 643
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 192 gcggcgccgctgctctgcgccggcgtcacggtgtacagcccg 233
Score = 38.2 bits (19), Expect = 0.83
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggc 786
||||||||||||||| | | |||||||| ||||||
Sbjct: 345 gtgatcagctcgtcgccgaggaagcgcgaggaggc 379
>gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D12f, mRNA sequence
Length = 694
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 372 gcggcgccgctgctctgcgccggcgtcacggtgtacagcccg 413
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 18 aaggtgctcttctgcgggatctgccacaccgacctcca 55
Score = 38.2 bits (19), Expect = 0.83
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggc 786
||||||||||||||| | | |||||||| ||||||
Sbjct: 525 gtgatcagctcgtcgccgaggaagcgcgaggaggc 559
>gb|BQ761570.1|BQ761570 EBem10_SQ001_K03_R embryo, 2 Day germination, no treatment, cv Optic,
EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_K03 5', mRNA sequence
Length = 118
Score = 60.0 bits (30), Expect = 2e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| || ||||||| ||||| ||| |||| | |||||||||||| |||||||
Sbjct: 5 tcgaggtcgttaagatggactacgtcaacacggcggttgagcggctggagaagaacgacg 64
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccggtag 1185
| | |||||||||||| ||||||||||||||||
Sbjct: 65 tgaggtaccgcttcgtcatcgacgtcgccggtag 98
>gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01P08T 5', mRNA sequence
Length = 697
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 181 aaggtgctcttctgcgggatctgccacaccgacctccac 219
Score = 38.2 bits (19), Expect = 0.83
Identities = 36/42 (85%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||| |||| |||| ||||| ||||| ||||||||||| |||
Sbjct: 537 gcggagccgttgctctgcgccggcgtcacggtgtacagnccg 578
>gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002J16f, mRNA sequence
Length = 834
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 173 aaggtgctcttctgcgggatctgccacaccgacctccac 211
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 527 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 568
>gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0005C09f, mRNA sequence
Length = 497
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 173 aaggtgctcttctgcgggatctgccacaccgacctccac 211
>gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008F16f, mRNA sequence
Length = 507
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 168 aaggtgctcttctgcgggatctgccacaccgacctccac 206
>gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014P12f, mRNA sequence
Length = 890
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 168 aaggtgctcttctgcgggatctgccacaccgacctccac 206
>gb|BI960471.1|BI960471 HVSMEn0024L10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024L10f,
mRNA sequence
Length = 647
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1145 aacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
|||||||||||||||||||||||| ||||| ||||
Sbjct: 191 aacgacgtccgctaccgcttcgtcatcgacatcgc 225
>gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025A03f, mRNA sequence
Length = 663
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 247 ggtgctctactgcgggatctgccacac 273
|||||||||||||||||||||||||||
Sbjct: 296 ggtgctctactgcgggatctgccacac 322
>gb|BE454565.3|BE454565 HVSMEh0094E10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094E10f, mRNA sequence
Length = 959
Score = 54.0 bits (27), Expect = 1e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 247 ggtgctctactgcgggatctgccacac 273
|||||||||||||||||||||||||||
Sbjct: 297 ggtgctctactgcgggatctgccacac 323
>gb|BJ447263.1|BJ447263 BJ447263 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak14l05 5', mRNA sequence
Length = 575
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1145 aacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
|||||||||||||||||||||||| ||||| ||||
Sbjct: 414 aacgacgtccgctaccgcttcgtcatcgacatcgc 448
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1121 gaggcgctggagcggctgg 1139
|||||||||||||||||||
Sbjct: 51 gaggcgctggagcggctgg 69
>gb|BJ454765.1|BJ454765 BJ454765 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak14l05 3', mRNA sequence
Length = 554
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1145 aacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
|||||||||||||||||||||||| ||||| ||||
Sbjct: 141 aacgacgtccgctaccgcttcgtcatcgacatcgc 107
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1121 gaggcgctggagcggctgg 1139
|||||||||||||||||||
Sbjct: 504 gaggcgctggagcggctgg 486
>gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_P23 5', mRNA sequence
Length = 568
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 168 gcgccgctgctctgcgccggcgtcacggtgtacagcccg 206
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1121 gaggcgctggagcggctgg 1139
|||||||||||||||||||
Sbjct: 348 gaggcgctggagcggctgg 366
>gb|BM443343.2|BM443343 EBro02_SQ003_K20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ003_K20 5', mRNA sequence
Length = 286
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 183 aaggtgctcttctgcgggatctgccacaccgacctccac 221
>gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_H20 5', mRNA sequence
Length = 493
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 183 aaggtgctcttctgcgggatctgccacaccgacctccac 221
>gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_J10 5', mRNA sequence
Length = 589
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 169 aaggtgctcttctgcgggatctgccacaccgacctccac 207
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 523 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 564
>gb|CA010065.1|CA010065 HT11L08u HT Hordeum vulgare subsp. vulgare cDNA clone HT11L08
3-PRIME, mRNA sequence
Length = 276
Score = 54.0 bits (27), Expect = 1e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 1092 tcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacg 1151
||||||| |||||||||| ||||| ||| |||| | ||||||||||| |||||||
Sbjct: 238 tcgaggtcgtcaagatggactacgtcaacacggcggtcgagcggctggaaaagaacgacg 179
Query: 1152 tccgctaccgcttcgtcgtcgacgtcgccgg 1182
| | |||||||||||| |||||||||||||
Sbjct: 178 tgaggtaccgcttcgtcatcgacgtcgccgg 148
>gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. vulgare cDNA clone HT11L08
5-PRIME, mRNA sequence
Length = 622
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
|||||||||| |||||||||||||||||| ||| |||||
Sbjct: 180 aaggtgctcttctgcgggatctgccacaccgacctccac 218
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 534 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 575
>gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. vulgare cDNA clone HP07O19
5-PRIME, mRNA sequence
Length = 595
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 172 gcgccgctgctctgcgccggcgtcacggtgtacagcccg 210
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1121 gaggcgctggagcggctgg 1139
|||||||||||||||||||
Sbjct: 352 gaggcgctggagcggctgg 370
>gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03O12u 5', mRNA sequence
Length = 500
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 119 aaggtgctcttctgcgggatctgccacaccgacctcca 156
Score = 36.2 bits (18), Expect = 3.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgt 624
|||||||||||||| ||||| |||||
Sbjct: 473 gcggcgccgctgctctgcgccggcgt 498
>gb|AL501883.1|AL501883 AL501883 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05L10u 3', mRNA sequence
Length = 633
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
||||||||||||||||||||| |||||| |||||
Sbjct: 360 gcgcaacgacgtccgctaccgtttcgtcatcgac 327
>gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016F14f, mRNA sequence
Length = 768
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 232 aaggtgctcttctgcgggatctgccacaccgacctcca 269
>gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022N15f, mRNA sequence
Length = 787
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 276 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 317
Score = 42.1 bits (21), Expect = 0.053
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcg 811
||||||||||||||| | | |||||||| |||||| | || | ||||||||| ||||||
Sbjct: 429 gtgatcagctcgtcgccgaggaagcgcgaggaggcgctcgagcgcctcggcgccgacgcg 488
Query: 812 t 812
|
Sbjct: 489 t 489
>gb|BF627817.2|BF627817 HVSMEb0005O02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005O02f, mRNA sequence
Length = 808
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 231 aaggtgctcttctgcgggatctgccacaccgacctcca 268
>gb|BF628744.2|BF628744 HVSMEb0007K23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007K23f, mRNA sequence
Length = 695
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 372 aaggtgctcttctgcgggatctgccacaccgacctcca 409
>gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008A03f, mRNA sequence
Length = 506
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatcca 282
|||||||||| |||||||||||||||||| ||| ||||
Sbjct: 160 aaggtgctcttctgcgggatctgccacaccgacctcca 197
>gb|BI957762.1|BI957762 HVSMEn0011B06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0011B06f, mRNA sequence
Length = 1173
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 44 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 85
>gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_L05 5', mRNA sequence
Length = 411
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 246 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 287
>gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_E09 5', mRNA sequence
Length = 432
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 263 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 304
>gb|CB877686.1|CB877686 HP05N08T HP Hordeum vulgare subsp. vulgare cDNA clone HP05N08
5-PRIME, mRNA sequence
Length = 266
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 104 gcggcgccgttgctctgcgccggcgtcacggtgtacagcccg 145
>gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05L10V 5', mRNA sequence
Length = 530
Score = 48.1 bits (24), Expect = 9e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaag 646
|||||||||||||||||||| || | |||||||||| |||| |||||
Sbjct: 194 gcggcgccgctgctgtgcgccgggatcacggtgtacaccccgatgaag 241
>gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009P20f, mRNA sequence
Length = 601
Score = 48.1 bits (24), Expect = 9e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 248 gtgctctactgcgggatctgccacacggacatccac 283
||||||| |||||||||||||||||| ||| |||||
Sbjct: 171 gtgctcttctgcgggatctgccacaccgacctccac 206
>gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06B04V 5', mRNA sequence
Length = 700
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacacggacatccac 283
||||||||||||||||| || |||||||| ||| |||||
Sbjct: 203 aaggtgctctactgcggcatgtgccacaccgacctccac 241
Score = 44.1 bits (22), Expect = 0.013
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaag 646
|||||||||||||||||| || | |||||||||| |||| |||||
Sbjct: 559 ggcgccgctgctgtgcgccgggatcacggtgtacaccccgatgaag 604
>gb|BQ467546.1|BQ467546 HS04C02r HS Hordeum vulgare subsp. vulgare cDNA clone HS04C02
5-PRIME, mRNA sequence
Length = 114
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1189 cgtcgaggcggaggcggcggcggcgga 1215
||||||||||| |||||||||||||||
Sbjct: 61 cgtcgaggcggcggcggcggcggcgga 35
>gb|CX662371.1|CX662371 EST 159 Expressed sequences from Barley Hordeum vulgare subsp.
vulgare cDNA clone P159 5', mRNA sequence
Length = 512
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1145 aacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
|||||||||||||||||||| ||| ||||| ||||
Sbjct: 268 aacgacgtccgctaccgctttgtcatcgacatcgc 302
>gb|AL500806.1|AL500806 AL500806 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01P08u 3', mRNA sequence
Length = 248
Score = 44.1 bits (22), Expect = 0.013
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 1130 gagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||| | |||||||||||| ||||| |||||||
Sbjct: 222 gagcggctggagaagaacgacgtgaggtaccgcttcgtcatcgacntcgccgg 170
>gb|AL510227.1|AL510227 AL510227 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04E16u 3',
mRNA sequence
Length = 581
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 93 gaggcggaggcggcggcggcgg 72
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 99 gaggcggaggcggaggcggcgg 78
>gb|BG299533.1|BG299533 HVSMEa0020J23f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0020J23f, mRNA sequence
Length = 822
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 64 gaggcggaggcggcggcggcgg 43
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 70 gaggcggaggcggaggcggcgg 49
>gb|BF616628.3|BF616628 HVSMEc0010N21f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0010N21f, mRNA sequence
Length = 825
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 51 gaggcggaggcggcggcggcgg 30
>gb|BF620700.3|BF620700 HVSMEc0020J23f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0020J23f, mRNA sequence
Length = 831
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 64 gaggcggaggcggcggcggcgg 43
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 70 gaggcggaggcggaggcggcgg 49
>gb|BE214044.2|BE214044 HV_CEb0001P23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001P23f, mRNA sequence
Length = 927
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 61 gaggcggaggcggcggcggcgg 40
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 67 gaggcggaggcggaggcggcgg 46
>gb|BQ467311.1|BQ467311 HS03F21r HS Hordeum vulgare subsp. vulgare cDNA clone HS03F21
5-PRIME, mRNA sequence
Length = 535
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 86 gaggcggaggcggcggcggcgg 65
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 92 gaggcggaggcggaggcggcgg 71
>gb|BM368074.2|BM368074 EBed01_SQ002_B12_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_B12 5', mRNA sequence
Length = 437
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcggatgcggc 1221
|||||||| |||||||||||||| ||||||
Sbjct: 66 cgaggcggcggcggcggcggcgggtgcggc 37
>gb|BM376461.2|BM376461 EBem05_SQ002_F07_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_F07 5', mRNA sequence
Length = 327
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 205 gaggcggaggcggcggcggcgg 184
>gb|BU999120.1|BU999120 HI13F05r HI Hordeum vulgare subsp. vulgare cDNA clone HI13F05
5-PRIME, mRNA sequence
Length = 636
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 126 gaggcggaggcggcggcggcgg 105
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 132 gaggcggaggcggaggcggcgg 111
>gb|AL508480.1|AL508480 AL508480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08O06V 5',
mRNA sequence
Length = 617
Score = 42.1 bits (21), Expect = 0.053
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 244 gaaggtgctctactgcgggatctgc 268
|||||||||||||||||| ||||||
Sbjct: 164 gaaggtgctctactgcggcatctgc 188
>gb|AV832545.1|AV832545 AV832545 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare leaves vegetative stage Hordeum vulgare subsp.
vulgare cDNA clone baak11p17, mRNA sequence
Length = 55
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 29 gtgacggtgatcagctcgtcg 9
>gb|AV836836.1|AV836836 AV836836 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd27e20, mRNA
sequence
Length = 646
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 639 gtgacggtgatcagctcgtcg 619
>gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022P19f, mRNA sequence
Length = 809
Score = 42.1 bits (21), Expect = 0.053
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||| |||||||||||| |||||
Sbjct: 169 aaggtgctcttctgcgggatctggcacac 197
>gb|BI947283.1|BI947283 HVSMEl0005A06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005A06f, mRNA sequence
Length = 994
Score = 42.1 bits (21), Expect = 0.053
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcg 811
||||||||||||||| | | |||||||| |||||| | || | ||||||||| ||||||
Sbjct: 198 gtgatcagctcgtcgccgaggaagcgcgaggaggcgctcgagcgcctcggcgccgacgcg 257
Query: 812 t 812
|
Sbjct: 258 t 258
>gb|BI950483.1|BI950483 HVSMEl0020O11f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0020O11f, mRNA sequence
Length = 473
Score = 42.1 bits (21), Expect = 0.053
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||| ||||||||||||||||||||
Sbjct: 170 gtcgcggcggaggcggcggcggcgg 194
>gb|BI959387.1|BI959387 HVSMEn0019H17f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019H17f,
mRNA sequence
Length = 648
Score = 42.1 bits (21), Expect = 0.053
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||| ||||||||||||||||||||
Sbjct: 148 gtcgcggcggaggcggcggcggcgg 172
>gb|BQ458310.1|BQ458310 HA05J23r HA Hordeum vulgare subsp. vulgare cDNA clone HA05J23
5-PRIME, mRNA sequence
Length = 427
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 224 gtgacggtgatcagctcgtcg 244
Score = 36.2 bits (18), Expect = 3.3
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||||| ||||||||||| ||| | || |||||||||||
Sbjct: 80 gcgcccctgctgtgcgccggcatcaccgtgtacagccc 117
>gb|BM099579.2|BM099579 EBes01_SQ003_K13_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ003_K13 5', mRNA sequence
Length = 602
Score = 42.1 bits (21), Expect = 0.053
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||| ||||||||||||||||||||
Sbjct: 149 gtcgcggcggaggcggcggcggcgg 173
>gb|BQ756210.1|BQ756210 EBem06_SQ001_B07_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ001_B07 5', mRNA sequence
Length = 86
Score = 42.1 bits (21), Expect = 0.053
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1199 gaggcggcggcggcggatgcggcca 1223
|||||||||||||||| ||||||||
Sbjct: 36 gaggcggcggcggcggctgcggcca 60
>gb|BQ768475.1|BQ768475 EBro08_SQ011_G19_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_G19 5', mRNA sequence
Length = 421
Score = 42.1 bits (21), Expect = 0.053
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcg 811
||||||||||||||| | | |||||||| |||||| | || | ||||||||| ||||||
Sbjct: 32 gtgatcagctcgtcgccgaggaagcgcgaggaggcgctcgagcgcctcggcgccgacgcg 91
Query: 812 t 812
|
Sbjct: 92 t 92
>gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. vulgare cDNA clone HA12E09
5-PRIME, mRNA sequence
Length = 573
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 264 gtgacggtgatcagctcgtcg 284
Score = 36.2 bits (18), Expect = 3.3
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||||| ||||||||||| ||| | || |||||||||||
Sbjct: 120 gcgcccctgctgtgcgccggcatcaccgtgtacagccc 157
>gb|BU997001.1|BU997001 HI06J07r HI Hordeum vulgare subsp. vulgare cDNA clone HI06J07
5-PRIME, mRNA sequence
Length = 542
Score = 42.1 bits (21), Expect = 0.053
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||| ||||||||||||||||||||
Sbjct: 70 gtcgcggcggaggcggcggcggcgg 94
>gb|BJ545538.1|BJ545538 BJ545538 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17o14 3', mRNA sequence
Length = 634
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 633 gtgacggtgatcagctcgtcg 613
>gb|CV055924.1|CV055924 BNEL12A11 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL12A11 5' similar to Chain A, Ppc
Decarboxylase Mutant C175s, mRNA sequence
Length = 617
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 79 gaggcggaggcggcggcggcg 59
>gb|CV063949.1|CV063949 BNEL95b11 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL95b11 5' similar to Unknown Function, mRNA
sequence
Length = 557
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 79 gaggcggaggcggcggcggcg 59
>gb|AL500489.1|AL500489 AL500489 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06N16r 3', mRNA sequence
Length = 700
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 154 ggcggaggcggcggcggcgg 135
>gb|AL503929.1|AL503929 AL503929 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03O03T 5', mRNA sequence
Length = 514
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 246 gcggaggcggcggcggcgga 227
>gb|AL506872.1|AL506872 AL506872 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04H23T 5',
mRNA sequence
Length = 680
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 49 cgaggcggcggcggcggcggcgga 26
>gb|AL507217.1|AL507217 AL507217 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01D09V 5',
mRNA sequence
Length = 403
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 25 ggcggaggcggcggcggcgg 6
>gb|AL507368.1|AL507368 AL507368 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05D17V 5',
mRNA sequence
Length = 691
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 50 cgaggcggcggcggcggcggcgga 27
>gb|AL507704.1|AL507704 AL507704 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06J22V 5',
mRNA sequence
Length = 295
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| ||||||||||||| ||||||||
Sbjct: 220 ggcggcggcggcggcggcgaatgcggcc 193
>gb|AL507814.1|AL507814 AL507814 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06O19V 5',
mRNA sequence
Length = 637
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 833 gcggccatggcggcggccgc 852
||||||||||||||||||||
Sbjct: 14 gcggccatggcggcggccgc 33
>gb|AL508127.1|AL508127 AL508127 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07N18V 5',
mRNA sequence
Length = 684
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 49 cgaggcggcggcggcggcggcgga 26
>gb|AL508630.1|AL508630 AL508630 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09F10V 5',
mRNA sequence
Length = 476
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 40 cgaggcggcggcggcggcggcgga 17
>gb|BF622994.1|BF622994 HVSMEa0012I07f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0012I07f, mRNA sequence
Length = 802
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 566 ggcggaggcggcggcggcgg 547
>gb|BG299306.1|BG299306 HVSMEa0019F01f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0019F01f, mRNA sequence
Length = 626
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1197 cggaggcggcggcggcggat 1216
||||||||||||||||||||
Sbjct: 313 cggaggcggcggcggcggat 332
>gb|BF630849.2|BF630849 HVSMEb0014D17f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0014D17f, mRNA sequence
Length = 849
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||||| |||||||||
Sbjct: 41 ggaggcggcggcggcggcggcggccagc 14
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||| ||||||||||||||
Sbjct: 40 gaggcggcggcggcggcggcgg 19
>gb|BF256346.2|BF256346 HVSMEf0009F04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0009F04f, mRNA sequence
Length = 835
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 31 ggcggaggcggcggcggcgg 12
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||| ||||||||||||||
Sbjct: 27 gaggcggcggcggcggcggcgg 6
>gb|BI951899.1|BI951899 HVSMEm0003K08f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0003K08f, mRNA sequence
Length = 884
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggat 1216
||||||||||||||||||| ||||
Sbjct: 135 gaggcggaggcggcggcggtggat 112
>gb|BI953573.1|BI953573 HVSMEm0013G03f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0013G03f, mRNA sequence
Length = 818
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 64 tcgccgggagcgacgtggaggcggtggcggcggcgg 29
>gb|BI955335.1|BI955335 HVSMEm0022J16f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0022J16f, mRNA sequence
Length = 654
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 111 tcgccgggagcgacgtggaggcggtggcggcggcgg 76
>gb|BI955729.1|BI955729 HVSMEm0024E04f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0024E04f, mRNA sequence
Length = 687
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 71 tcgccgggagcgacgtggaggcggtggcggcggcgg 36
>gb|BI955740.1|BI955740 HVSMEm0024E20f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0024E20f, mRNA sequence
Length = 691
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 59 tcgccgggagcgacgtggaggcggtggcggcggcgg 24
>gb|BF261490.2|BF261490 HV_CEa0001G19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001G19f, mRNA sequence
Length = 842
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 109 tcgccgggagcgacgtggaggcggtggcggcggcgg 74
>gb|BF065362.2|BF065362 HV_CEb0012D17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012D17f, mRNA sequence
Length = 562
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 256 ctgcgggatctgccacacggacatccac 283
|||||||||||||||||| ||| |||||
Sbjct: 302 ctgcgggatctgccacaccgacctccac 329
>gb|BI958051.1|BI958051 HVSMEn0013B20f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0013B20f,
mRNA sequence
Length = 873
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 236 gcggaggcggcggcggcgga 217
>gb|BF254616.3|BF254616 HVSMEf0004I10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004I10f, mRNA sequence
Length = 848
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 106 ggcggaggcggcggcggcgg 87
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||| ||||||||||||||
Sbjct: 102 gaggcggcggcggcggcggcgg 81
>gb|BF259935.3|BF259935 HVSMEf0020K16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0020K16f, mRNA sequence
Length = 881
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1119 acgaggcgctggagcggctg 1138
||||||||||||||||||||
Sbjct: 348 acgaggcgctggagcggctg 367
>gb|BE195901.3|BE195901 HVSMEh0090N09f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0090N09f, mRNA sequence
Length = 634
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 57 ggcggaggcggcggcggcgg 38
>gb|BE214059.2|BE214059 HV_CEb0002B09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002B09f, mRNA sequence
Length = 943
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 105 tcgccgggagcgacgtggaggcggtggcggcggcgg 70
>gb|BQ460148.1|BQ460148 HA07B12r HA Hordeum vulgare subsp. vulgare cDNA clone HA07B12
5-PRIME, mRNA sequence
Length = 560
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 64 cgaggcggcggcggcggcggcgga 41
>gb|BQ461129.1|BQ461129 HE01B23r HE Hordeum vulgare subsp. vulgare cDNA clone HE01B23
5-PRIME, mRNA sequence
Length = 263
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 118 tcgccgggagcgacgtggaggcggtggcggcggcgg 83
>gb|BQ464396.1|BQ464396 HF02C14r HF Hordeum vulgare subsp. vulgare cDNA clone HF02C14
5-PRIME, mRNA sequence
Length = 472
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 40 cgaggcggcggcggcggcggcgga 17
>gb|BQ464412.1|BQ464412 HF02D08r HF Hordeum vulgare subsp. vulgare cDNA clone HF02D08
5-PRIME, mRNA sequence
Length = 566
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 71 cgaggcggcggcggcggcggcgga 48
>gb|BQ467691.1|BQ467691 HS04J05r HS Hordeum vulgare subsp. vulgare cDNA clone HS04J05
5-PRIME, mRNA sequence
Length = 376
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 52 ggcggaggcggcggcggcgg 33
>gb|BQ468263.1|BQ468263 HP01K07T HP Hordeum vulgare subsp. vulgare cDNA clone HP01K07
5-PRIME, mRNA sequence
Length = 180
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 60 tcgccgggagcgacgtggaggcggtggcggcggcgg 25
>gb|BQ468806.1|BQ468806 HM02G10r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G10
5-PRIME, mRNA sequence
Length = 491
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 54 cgaggcggcggcggcggcggcgga 31
>gb|BQ469009.1|BQ469009 HM03B14r HM Hordeum vulgare subsp. vulgare cDNA clone HM03B14
5-PRIME, mRNA sequence
Length = 586
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 46 cgaggcggcggcggcggcggcgga 23
>gb|BQ469579.1|BQ469579 HZ01D15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01D15
5-PRIME, mRNA sequence
Length = 508
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 53 cgaggcggcggcggcggcggcgga 30
>gb|BM377158.2|BM377158 EBem05_SQ004_E18_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_E18 5', mRNA sequence
Length = 481
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 220 gcggaggcggcggcggcgga 201
>gb|BM368992.2|BM368992 EBem07_SQ002_D17_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ002_D17 5', mRNA sequence
Length = 364
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1202 gcggcggcggcggatgcggc 1221
||||||||||||||||||||
Sbjct: 62 gcggcggcggcggatgcggc 43
>gb|BM370600.2|BM370600 EBro08_SQ004_L09_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_L09 5', mRNA sequence
Length = 666
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 90 ggcggaggcggcggcggcgg 71
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||| ||||||||||||||
Sbjct: 86 gaggcggcggcggcggcggcgg 65
>gb|BQ757020.1|BQ757020 EBem10_SQ002_I13_R embryo, 2 Day germination, no treatment, cv Optic,
EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ002_I13 5', mRNA sequence
Length = 338
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 70 cgaggcggcggcggcggcggcgga 47
>gb|BQ768733.1|BQ768733 EBro08_SQ012_D17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_D17 5', mRNA sequence
Length = 298
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 42 ggcggaggcggcggcggcgg 23
>gb|BU976563.1|BU976563 HA03O16r HA Hordeum vulgare subsp. vulgare cDNA clone HA03O16
5-PRIME, mRNA sequence
Length = 556
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 61 cgaggcggcggcggcggcggcgga 38
>gb|BU978209.1|BU978209 HA12M04r HA Hordeum vulgare subsp. vulgare cDNA clone HA12M04
5-PRIME, mRNA sequence
Length = 550
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 55 cgaggcggcggcggcggcggcgga 32
>gb|BU978517.1|BU978517 HA13H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA13H11
5-PRIME, mRNA sequence
Length = 546
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 51 cgaggcggcggcggcggcggcgga 28
>gb|BU978527.1|BU978527 HA13H23r HA Hordeum vulgare subsp. vulgare cDNA clone HA13H23
5-PRIME, mRNA sequence
Length = 476
Score = 40.1 bits (20), Expect = 0.21
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgacgtcg 1178
||||||| | |||||||||||| |||||||||
Sbjct: 423 cgacgtcaggtaccgcttcgtcatcgacgtcg 454
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1121 gaggcgctggagcggctgg 1139
|||||||||||||||||||
Sbjct: 58 gaggcgctggagcggctgg 76
>gb|BU978729.1|BU978729 HA14B19r HA Hordeum vulgare subsp. vulgare cDNA clone HA14B19
5-PRIME, mRNA sequence
Length = 515
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 60 cgaggcggcggcggcggcggcgga 37
>gb|BU981723.1|BU981723 HA24H04r HA Hordeum vulgare subsp. vulgare cDNA clone HA24H04
5-PRIME, mRNA sequence
Length = 556
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 61 cgaggcggcggcggcggcggcgga 38
>gb|BU982919.1|BU982919 HA27P20r HA Hordeum vulgare subsp. vulgare cDNA clone HA27P20
5-PRIME, mRNA sequence
Length = 584
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| |||||||||||||| |||||||
Sbjct: 37 ggcggcggcggcggcggcgggtgcggcc 10
>gb|BU983414.1|BU983414 HA29K13r HA Hordeum vulgare subsp. vulgare cDNA clone HA29K13
5-PRIME, mRNA sequence
Length = 382
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 70 cgaggcggcggcggcggcggcgga 47
>gb|BU983461.1|BU983461 HA29N06r HA Hordeum vulgare subsp. vulgare cDNA clone HA29N06
5-PRIME, mRNA sequence
Length = 584
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 70 cgaggcggcggcggcggcggcgga 47
>gb|BU983705.1|BU983705 HA30L10r HA Hordeum vulgare subsp. vulgare cDNA clone HA30L10
5-PRIME, mRNA sequence
Length = 519
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| |||||||||||||| |||||||
Sbjct: 37 ggcggcggcggcggcggcgggtgcggcc 10
>gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M03
5-PRIME, mRNA sequence
Length = 648
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtc 765
||||||||||||||||||||
Sbjct: 629 gtgacggtgatcagctcgtc 648
Score = 36.2 bits (18), Expect = 3.3
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||||| ||||||||||| ||| | || |||||||||||
Sbjct: 485 gcgcccctgctgtgcgccggcatcaccgtgtacagccc 522
Score = 36.2 bits (18), Expect = 3.3
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 254 tactgcgggatctgccac 271
||||||||||||||||||
Sbjct: 137 tactgcgggatctgccac 154
>gb|BU995425.1|BU995425 HM10D13r HM Hordeum vulgare subsp. vulgare cDNA clone HM10D13
5-PRIME, mRNA sequence
Length = 640
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 64 cgaggcggcggcggcggcggcgga 41
>gb|BU999740.1|BU999740 HI15J03r HI Hordeum vulgare subsp. vulgare cDNA clone HI15J03
5-PRIME, mRNA sequence
Length = 533
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 31 ggcggaggcggcggcggcgg 12
>gb|CA002238.1|CA002238 HS06O15r HS Hordeum vulgare subsp. vulgare cDNA clone HS06O15
5-PRIME, mRNA sequence
Length = 379
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 51 ggcggaggcggcggcggcgg 32
>gb|CA003040.1|CA003040 HS09D04r HS Hordeum vulgare subsp. vulgare cDNA clone HS09D04
5-PRIME, mRNA sequence
Length = 416
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 58 cgaggcggcggcggcggcggcgga 35
>gb|CA007420.1|CA007420 HU07O14r HU Hordeum vulgare subsp. vulgare cDNA clone HU07O14
5-PRIME, mRNA sequence
Length = 560
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 65 cgaggcggcggcggcggcggcgga 42
>gb|CA018337.1|CA018337 HV08F10r HV Hordeum vulgare subsp. vulgare cDNA clone HV08F10
5-PRIME, mRNA sequence
Length = 564
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 69 cgaggcggcggcggcggcggcgga 46
>gb|CA023327.1|CA023327 HZ45O06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45O06
5-PRIME, mRNA sequence
Length = 534
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 39 cgaggcggcggcggcggcggcgga 16
>gb|CA025213.1|CA025213 HZ51I11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51I11
5-PRIME, mRNA sequence
Length = 559
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 64 cgaggcggcggcggcggcggcgga 41
>gb|CA027364.1|CA027364 HZ58K23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58K23
5-PRIME, mRNA sequence
Length = 429
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 70 cgaggcggcggcggcggcggcgga 47
>gb|CA028332.1|CA028332 HZ61K16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61K16
5-PRIME, mRNA sequence
Length = 300
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 41 cgaggcggcggcggcggcggcgga 18
>gb|CA030777.1|CA030777 HX08B16r HX Hordeum vulgare subsp. vulgare cDNA clone HX08B16
5-PRIME, mRNA sequence
Length = 553
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 43 cgaggcggcggcggcggcggcgga 20
>gb|CA031768.1|CA031768 HX11B08r HX Hordeum vulgare subsp. vulgare cDNA clone HX11B08
5-PRIME, mRNA sequence
Length = 642
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 65 cgaggcggcggcggcggcggcgga 42
>gb|CB876748.1|CB876748 HP02E12T HP Hordeum vulgare subsp. vulgare cDNA clone HP02E12
5-PRIME, mRNA sequence
Length = 632
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| ||||||||||||| ||||||||
Sbjct: 255 ggcggcggcggcggcggcgaatgcggcc 228
>gb|CB877472.1|CB877472 HP05A21T HP Hordeum vulgare subsp. vulgare cDNA clone HP05A21
5-PRIME, mRNA sequence
Length = 199
Score = 40.1 bits (20), Expect = 0.21
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1176 tcgccggtagcaacgtcgaggcggaggcggcggcgg 1211
||||||| ||| |||| ||||||| |||||||||||
Sbjct: 37 tcgccgggagcgacgtggaggcggtggcggcggcgg 2
>gb|CB879324.1|CB879324 HP11M01T HP Hordeum vulgare subsp. vulgare cDNA clone HP11M01
5-PRIME, mRNA sequence
Length = 490
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 63 cgaggcggcggcggcggcggcgga 40
>gb|CB882751.1|CB882751 HL02L24w HL Hordeum vulgare subsp. vulgare cDNA clone HL02L24
3-PRIME, mRNA sequence
Length = 518
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 81 ggcggaggcggcggcggcgg 62
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||| ||||||||||||||
Sbjct: 77 gaggcggcggcggcggcggcgg 56
>gb|CK124459.1|CK124459 BES1824109d13 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D139 5-PRIME, mRNA sequence
Length = 577
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 52 cgaggcggcggcggcggcggcgga 29
>gb|CK125767.1|CK125767 BES1824110l22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L2210 5-PRIME, mRNA sequence
Length = 659
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 40 cgaggcggcggcggcggcggcgga 17
>gb|AF294753.1| Hordeum vulgare subsp. vulgare glutamyl-tRNA reductase (hemA2) gene,
partial cds
Length = 1979
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| ||||||||||||| ||||||||
Sbjct: 789 ggcggcggcggcggcggcgaatgcggcc 762
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
Length = 439641
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 90 ccgtcgtcgtcgtccccgccgcgc 113
||||||||||||||| ||||||||
Sbjct: 387927 ccgtcgtcgtcgtcctcgccgcgc 387950
>gb|AL505892.1|AL505892 AL505892 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09N08V 5', mRNA sequence
Length = 500
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 75 cgaggcggcggcggcggcggcgg 53
>gb|AL506224.1|AL506224 AL506224 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G23T 5',
mRNA sequence
Length = 700
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 827 gacgccgcggccatggcggcggc 849
|||||||||||||| ||||||||
Sbjct: 578 gacgccgcggccattgcggcggc 556
>gb|AL506492.1|AL506492 AL506492 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03F06T 5',
mRNA sequence
Length = 700
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1203 cggcggcggcggatgcggc 1221
|||||||||||||||||||
Sbjct: 45 cggcggcggcggatgcggc 27
>gb|AL507853.1|AL507853 AL507853 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07A17V 5',
mRNA sequence
Length = 689
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 35 ggcggcggcggcggcggcgggtgcggc 9
>gb|AL508242.1|AL508242 AL508242 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08D01V 5',
mRNA sequence
Length = 572
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 61 cgaggcggcggcggcggcggcgg 39
>gb|BF621498.1|BF621498 HVSMEa0011D06f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011D06f, mRNA sequence
Length = 789
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 42 cgaggcggcggcggcggcggcgg 20
>gb|BF621349.2|BF621349 HVSMEa0006J13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0006J13f, mRNA sequence
Length = 864
Score = 38.2 bits (19), Expect = 0.83
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggc 786
||||||||||||||| | | |||||||| ||||||
Sbjct: 64 gtgatcagctcgtcgccgaggaagcgcgaggaggc 98
>gb|BF623129.3|BF623129 HVSMEa0014J20f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0014J20f, mRNA sequence
Length = 713
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 49 cgaggcggcggcggcggcggcgg 27
>gb|BF628195.2|BF628195 HVSMEb0003G06f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0003G06f, mRNA sequence
Length = 506
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatg 1217
||||| |||||||||||||||||
Sbjct: 126 ggcggcggcggcggcggcggatg 148
>gb|BF629950.2|BF629950 HVSMEb0007H03f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0007H03f, mRNA sequence
Length = 501
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 49 cgaggcggcggcggcggcggcgg 27
>gb|BF631575.2|BF631575 HVSMEb0016H13f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0016H13f, mRNA sequence
Length = 886
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 43 cgaggcggcggcggcggcggcgg 21
>gb|BG300418.1|BG300418 HVSMEb0016P18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0016P18f, mRNA sequence
Length = 626
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 81 cgaggcggcggcggcggcggcgg 59
>gb|BF254703.2|BF254703 HVSMEf0004M13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004M13f, mRNA sequence
Length = 907
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcg 1213
|||||||||||||||||||
Sbjct: 67 ggcggaggcggcggcggcg 49
>gb|BF255211.2|BF255211 HVSMEf0006E02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006E02f, mRNA sequence
Length = 602
Score = 38.2 bits (19), Expect = 0.83
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggc 786
||||||||||||||| | | |||||||| ||||||
Sbjct: 323 gtgatcagctcgtcgccgaggaagcgcgaggaggc 357
Score = 36.2 bits (18), Expect = 3.3
Identities = 36/42 (85%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
||||||||| |||| || || ||||| || ||||||||||||
Sbjct: 170 gcggcgccgttgctctgagccggcgtaaccgtgtacagcccg 211
>gb|BF256229.2|BF256229 HVSMEf0009D07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0009D07f, mRNA sequence
Length = 255
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||| ||||||||||||||||||
Sbjct: 243 gaggaggaggcggcggcggcgga 221
>gb|BF256422.2|BF256422 HVSMEf0009J10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0009J10f, mRNA sequence
Length = 851
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcg 1213
|||||||||||||||||||
Sbjct: 74 ggcggaggcggcggcggcg 56
>gb|BF257343.2|BF257343 HVSMEf0012J20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0012J20f, mRNA sequence
Length = 539
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 45 ggcggcggcggcggcggcgggtgcggc 19
>gb|BF257655.2|BF257655 HVSMEf0013H15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0013H15f, mRNA sequence
Length = 543
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||||||||||||| ||||||||||
Sbjct: 402 ggcggaggcggcggctacggatgcggc 428
>gb|BF257799.2|BF257799 HVSMEf0013O11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0013O11f, mRNA sequence
Length = 524
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||||||||||||| ||||||||||
Sbjct: 391 ggcggaggcggcggctacggatgcggc 417
>gb|BF259803.2|BF259803 HVSMEf0020E23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0020E23f, mRNA sequence
Length = 538
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 39 ggcggcggcggcggcggcgggtgcggc 13
>gb|BE194891.2|BE194891 HVSMEh0087H04f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0087H04f, mRNA sequence
Length = 486
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcg 1213
|||||||||||||||||||
Sbjct: 60 ggcggaggcggcggcggcg 42
>gb|BG367021.1|BG367021 HVSMEi0009N14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0009N14f, mRNA sequence
Length = 803
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 342 tcggcgaggtggtggaggt 360
|||||||||||||||||||
Sbjct: 88 tcggcgaggtggtggaggt 106
>gb|BI947534.1|BI947534 HVSMEl0005M21f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0005M21f, mRNA sequence
Length = 503
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 41 ggcggcggcggcggcggcgggtgcggc 15
>gb|BI956379.1|BI956379 HVSMEn0003A09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003A09f, mRNA sequence
Length = 482
Score = 38.2 bits (19), Expect = 0.83
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 752 gtgatcagctcgtcgtccaagaagcgcgcggaggc 786
||||||||||||||| | | |||||||| ||||||
Sbjct: 6 gtgatcagctcgtcgccgaggaagcgcgaggaggc 40
>gb|BI957670.1|BI957670 HVSMEn0010J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010J13f, mRNA sequence
Length = 654
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 829 cgccgcggccatggcggcg 847
|||||||||||||||||||
Sbjct: 184 cgccgcggccatggcggcg 166
>gb|BI957877.1|BI957877 HVSMEn0011N21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0011N21f,
mRNA sequence
Length = 732
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 41 ggcggcggcggcggcggcgggtgcggc 15
>gb|BF263809.2|BF263809 HV_CEa0007L18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007L18f, mRNA sequence
Length = 598
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 34 ggcggcggcggcggcggcgggtgcggc 8
>gb|BE214873.2|BE214873 HV_CEb0004P08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004P08f, mRNA sequence
Length = 639
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcgg 1214
|||||||||||||||||||
Sbjct: 250 gcggaggcggcggcggcgg 268
>gb|BE215275.2|BE215275 HV_CEb0006F17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006F17f, mRNA sequence
Length = 938
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcg 1213
|||||||||||||||||||
Sbjct: 70 ggcggaggcggcggcggcg 52
>gb|BE215567.2|BE215567 HV_CEb0008C14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008C14f, mRNA sequence
Length = 497
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 37 ggcggcggcggcggcggcgggtgcggc 11
>gb|BI959345.1|BI959345 HVSMEn0019F04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019F04f,
mRNA sequence
Length = 671
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 37 ggcggcggcggcggcggcgggtgcggc 11
>gb|BF255672.3|BF255672 HVSMEf0007H21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0007H21f, mRNA sequence
Length = 868
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcg 1213
|||||||||||||||||||
Sbjct: 69 ggcggaggcggcggcggcg 51
>gb|BF257006.3|BF257006 HVSMEf0011J16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0011J16f, mRNA sequence
Length = 535
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcgg 1211
|||||||||||||||||||
Sbjct: 139 gaggcggaggcggcggcgg 157
>gb|AW982552.3|AW982552 HVSMEg0003J07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003J07f, mRNA sequence
Length = 588
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| || ||||||||||||||||||
Sbjct: 241 ggcggcggaggcggcggcggatgcggc 215
>gb|AW982976.3|AW982976 HVSMEg0004L10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004L10f, mRNA sequence
Length = 719
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 34 ggcggcggcggcggcggcgggtgcggc 8
>gb|BE060287.3|BE060287 HVSMEg0011N20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011N20f, mRNA sequence
Length = 540
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 45 ggcggcggcggcggcggcgggtgcggc 19
>gb|BG344999.2|BG344999 HVSMEg0018D23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018D23f, mRNA sequence
Length = 826
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggccag 1224
||||||||||||||||| ||||||||
Sbjct: 27 ggaggcggcggcggcggcggcggccag 1
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||| ||||||||||||||
Sbjct: 26 gaggcggcggcggcggcggcgg 5
>gb|BE454994.3|BE454994 HVSMEh0095M19f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0095M19f, mRNA sequence
Length = 567
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcg 1213
|||||||||||||||||||
Sbjct: 69 ggcggaggcggcggcggcg 51
>gb|BE455148.3|BE455148 HVSMEh0096F22f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0096F22f, mRNA sequence
Length = 708
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 79 cgaggcggcggcggcggcggcgg 57
>gb|BG368904.2|BG368904 HVSMEi0021D19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021D19f, mRNA sequence
Length = 834
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcgg 1220
|||||||||||||||||| ||||
Sbjct: 373 ggaggcggcggcggcggaggcgg 351
>gb|BG414719.2|BG414719 HVSMEk0003I05f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0003I05f, mRNA sequence
Length = 886
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1203 cggcggcggcggatgcggc 1221
|||||||||||||||||||
Sbjct: 53 cggcggcggcggatgcggc 35
>gb|BG416159.2|BG416159 HVSMEk0009P23f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0009P23f, mRNA sequence
Length = 984
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 50 cgaggcggcggcggcggcggcgg 28
>gb|BG416695.2|BG416695 HVSMEk0014C10f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0014C10f, mRNA sequence
Length = 478
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgg 1214
|||||||||||||||||||
Sbjct: 25 gcggaggcggcggcggcgg 7
>gb|BG417130.2|BG417130 HVSMEk0016G04f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0016G04f, mRNA sequence
Length = 500
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgg 1214
|||||||||||||||||||
Sbjct: 29 gcggaggcggcggcggcgg 11
>gb|BF264414.3|BF264414 HV_CEa0009F20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009F20f, mRNA sequence
Length = 831
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
||||| |||||||||||||||||
Sbjct: 39 cgaggaggaggcggcggcggcgg 17
>gb|BF267750.3|BF267750 HV_CEa0018M15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018M15f, mRNA sequence
Length = 790
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcgg 1211
|||||||||||||||||||
Sbjct: 81 gaggcggaggcggcggcgg 63
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 87 gaggcggaggcggaggcggcgg 66
>gb|BE213867.3|BE213867 HV_CEb0001H23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001H23f, mRNA sequence
Length = 936
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 342 tcggcgaggtggtggaggt 360
|||||||||||||||||||
Sbjct: 104 tcggcgaggtggtggaggt 122
>gb|BF065394.3|BF065394 HV_CEb0012F02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012F02f, mRNA sequence
Length = 532
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcgg 1211
|||||||||||||||||||
Sbjct: 84 gaggcggaggcggcggcgg 66
Score = 36.2 bits (18), Expect = 3.3
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||| ||||||||
Sbjct: 90 gaggcggaggcggaggcggcgg 69
>gb|BM101138.1|BM101138 EBpi01_SQ002_P22_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_P22 5', mRNA sequence
Length = 434
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 7 cgaggcggcggcggcggcggcgg 29
>gb|BM374916.1|BM374916 EBma05_SQ003_I16_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_I16 5', mRNA sequence
Length = 475
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgg 1214
|||||||||||||||||||
Sbjct: 22 gcggaggcggcggcggcgg 4
>gb|BM374939.1|BM374939 EBma05_SQ003_L05_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_L05 5', mRNA sequence
Length = 532
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 50 cgaggcggcggcggcggcggcgg 28
>gb|BM374955.1|BM374955 EBma05_SQ003_M13_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_M13 5', mRNA sequence
Length = 479
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 50 cgaggcggcggcggcggcggcgg 28
>gb|AV913780.1|AV913780 AV913780 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e05 5', mRNA sequence
Length = 664
Score = 38.2 bits (19), Expect = 0.83
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggc 1221
||||| |||||||||||||| ||||||
Sbjct: 68 ggcggcggcggcggcggcgggtgcggc 42
>gb|AV922832.1|AV922832 AV922832 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd2i17 5', mRNA sequence
Length = 563
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 57 cgaggcggcggcggcggcggcgg 35
>gb|AV923405.1|AV923405 AV923405 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd12p20 5', mRNA sequence
Length = 307
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 66 cgaggcggcggcggcggcggcgg 44
>gb|AV923627.1|AV923627 AV923627 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13n04 5', mRNA sequence
Length = 585
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 77 cgaggcggcggcggcggcggcgg 55
>gb|AV923677.1|AV923677 AV923677 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13p20 5', mRNA sequence
Length = 598
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 89 cgaggcggcggcggcggcggcgg 67
>gb|AV923826.1|AV923826 AV923826 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1l03 5', mRNA sequence
Length = 598
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 89 cgaggcggcggcggcggcggcgg 67
>gb|AV923952.1|AV923952 AV923952 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd20f11 5', mRNA sequence
Length = 346
Score = 38.2 bits (19), Expect = 0.83
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||
Sbjct: 63 cgaggcggcggcggcggcggcgg 41
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 315,824
Number of Sequences: 312970
Number of extensions: 315824
Number of successful extensions: 120721
Number of sequences better than 10.0: 1151
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116723
Number of HSP's gapped (non-prelim): 3004
length of query: 1516
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1497
effective length of database: 169,188,109
effective search space: 253274599173
effective search space used: 253274599173
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)