BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCG38e04.yg.2.1
         (690 letters)

Database: Hordeum_nucl_with_EST.fasta 
           312,970 sequences; 175,134,539 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BJ469639.1|BJ469639  BJ469639 K. Sato unpublished cDNA li...   349   8e-095
gb|BJ473076.1|BJ473076  BJ473076 K. Sato unpublished cDNA li...   349   8e-095
gb|CA018258.1|CA018258  HV08B15r HV Hordeum vulgare subsp. v...   333   4e-090
gb|BF616755.1|BF616755  HVSMEc0012I18f Hordeum vulgare seedl...   276   9e-073
gb|BM374437.2|BM374437  EBpi03_SQ003_J24_R pistil, 4 DPA, no...   214   3e-054
gb|BF627189.2|BF627189  HVSMEb0004D01f Hordeum vulgare seedl...   204   3e-051
gb|CA027060.1|CA027060  HZ57M12r HZ Hordeum vulgare subsp. v...   204   3e-051
gb|BG369637.1|BG369637  HVSMEi0025E14f Hordeum vulgare 20 DA...   196   7e-049
gb|AV932586.1|AV932586  AV932586 K. Sato unpublished cDNA li...   127   5e-028
gb|AV934137.1|AV934137  AV934137 K. Sato unpublished cDNA li...   121   3e-026
gb|BF265457.3|BF265457  HV_CEa0012F07f Hordeum vulgare seedl...   107   5e-022
gb|BG418430.1|BG418430  HVSMEk0022K21f Hordeum vulgare testa...    94   7e-018
gb|BJ470174.1|BJ470174  BJ470174 K. Sato unpublished cDNA li...    92   3e-017
gb|BU999201.1|BU999201  HI13K20r HI Hordeum vulgare subsp. v...    82   3e-014
gb|BU982241.1|BU982241  HA25P01r HA Hordeum vulgare subsp. v...    62   3e-008
gb|AV926707.1|AV926707  AV926707 K. Sato unpublished cDNA li...    58   4e-007
gb|AV926708.1|AV926708  AV926708 K. Sato unpublished cDNA li...    58   4e-007
gb|AV836635.1|AV836635  AV836635 K. Sato unpublished cDNA li...    50   1e-004
gb|BE215834.2|BE215834  HV_CEb0008J21f Hordeum vulgare seedl...    50   1e-004
gb|CA031522.1|CA031522  HX10D22r HX Hordeum vulgare subsp. v...    50   1e-004
gb|AY177665.1|  Hordeum vulgare subsp. vulgare putative call...    50   1e-004
gb|BM928837.1|BM928837  LP10011 Lemma/palea-enriched cDNA li...    38   0.37 
>gb|BJ469639.1|BJ469639 BJ469639 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal27j14 5', mRNA sequence
          Length = 604

 Score =  349 bits (176), Expect = 8e-095
 Identities = 452/545 (82%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || |  ||||| |||
Sbjct: 563 aggggctcgtgctctttctcccaccatgactcccaacttttctccggcgaaacaccgata 504

                                                                       
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccac 159
           || || || |||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 503 cccccgcggttgctgatccacttgttccagtcagtccagtcatccacaatcttctgccac 444

                                                                       
Query: 160 tcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccac 219
           || || |||||||| ||||||||||| || ||||||||||| ||  | ||||||||||||
Sbjct: 443 tcgaacccagaagggttgaacaggaacggcgcaaagagccaggtaacgaccatgaaccac 384

                                                                       
Query: 220 atggatacggtgatgaagatgtaagttatagcccctctatatgactgaccaaatatttca 279
           ||||| | ||| ||||||||||| |  || || ||||  || ||||| || || || |||
Sbjct: 383 atggagaaggttatgaagatgtacgcgatggctcctcggtacgactgcccgaagatctca 324

                                                                       
Query: 280 tacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagt 339
            |||| |  || |  ||||||| ||| | ||||||||| |||||||| || || || || 
Sbjct: 323 aacacgataagcaagatcatcaactcgatgcccttgacgaaatggctccgcgagtacagc 264

                                                                       
Query: 340 cgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtat 399
           ||||||||||| || || ||||||||||||||||| || ||||||||||| ||||| || 
Sbjct: 263 cgatagttctcggcgaacttggcatggaacaccacgaatccacgtccagtagctctatac 204

                                                                       
Query: 400 tccgctcctccatggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaat 459
           || ||||||||||| || | |||| |||||||||||||||| || ||||| |  ||||||
Sbjct: 203 tcagctcctccatgtagcagcgtctttccgtagtagtgagtcttggttccgagggagaat 144

                                                                       
Query: 460 gtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgcagttctg 519
           |||||||| || || || ||||||||||||||||| | ||| || |||||||| || |||
Sbjct: 143 gtgaagaagacggatgctaactgaagctgcatcagcacaaagtcgctcaatgcggtcctg 84

                                                                       
Query: 520 aatcctctctccaaaccgatttccatcatcatgggcagcgccatcaaaaatccangnngc 579
           || |||||||||| ||| || ||||||||||| || || |||||||| || ||| |  ||
Sbjct: 83  aaccctctctccagaccaatctccatcatcatagggagtgccatcaagaagccaagctgc 24

                
Query: 580 acaaa 584
           |||||
Sbjct: 23  acaaa 19
>gb|BJ473076.1|BJ473076 BJ473076 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal40n15 5', mRNA sequence
          Length = 614

 Score =  349 bits (176), Expect = 8e-095
 Identities = 452/545 (82%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || |  ||||| |||
Sbjct: 574 aggggctcgtgctctttctcccaccatgactcccaacttttctccggcgaaacaccgata 515

                                                                       
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccac 159
           || || || |||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 514 cccccgcggttgctgatccacttgttccagtcagtccagtcatccacaatcttctgccac 455

                                                                       
Query: 160 tcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccac 219
           || || |||||||| ||||||||||| || ||||||||||| ||  | ||||||||||||
Sbjct: 454 tcgaacccagaagggttgaacaggaacggcgcaaagagccaggtaacgaccatgaaccac 395

                                                                       
Query: 220 atggatacggtgatgaagatgtaagttatagcccctctatatgactgaccaaatatttca 279
           ||||| | ||| ||||||||||| |  || || ||||  || ||||| || || || |||
Sbjct: 394 atggagaaggttatgaagatgtacgcgatggctcctcggtacgactgcccgaagatctca 335

                                                                       
Query: 280 tacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagt 339
            |||| |  || |  ||||||| ||| | ||||||||| |||||||| || || || || 
Sbjct: 334 aacacgataagcaagatcatcaactcgatgcccttgacgaaatggctccgcgagtacagc 275

                                                                       
Query: 340 cgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtat 399
           ||||||||||| || || ||||||||||||||||| || ||||||||||| ||||| || 
Sbjct: 274 cgatagttctcggcgaacttggcatggaacaccacgaatccacgtccagtagctctatac 215

                                                                       
Query: 400 tccgctcctccatggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaat 459
           || ||||||||||| || | |||| |||||||||||||||| || ||||| |  ||||||
Sbjct: 214 tcagctcctccatgtagcagcgtctttccgtagtagtgagtcttggttccgagggagaat 155

                                                                       
Query: 460 gtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgcagttctg 519
           |||||||| || || || ||||||||||||||||| | ||| || |||||||| || |||
Sbjct: 154 gtgaagaagacggatgctaactgaagctgcatcagcacaaagtcgctcaatgcggtcctg 95

                                                                       
Query: 520 aatcctctctccaaaccgatttccatcatcatgggcagcgccatcaaaaatccangnngc 579
           || |||||||||| ||| || ||||||||||| || || |||||||| || ||| |  ||
Sbjct: 94  aaccctctctccagaccaatctccatcatcatagggagtgccatcaagaagccaagctgc 35

                
Query: 580 acaaa 584
           |||||
Sbjct: 34  acaaa 30
>gb|CA018258.1|CA018258 HV08B15r HV Hordeum vulgare subsp. vulgare cDNA clone HV08B15
           5-PRIME, mRNA sequence
          Length = 654

 Score =  333 bits (168), Expect = 4e-090
 Identities = 282/320 (88%)
 Strand = Plus / Minus

                                                                       
Query: 22  cgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccagcttttc 81
           ||||||||||||   ||||| ||  |||||||||| |||||||| || ||||||||||||
Sbjct: 330 cgcttcccagagtgccgaagaggtccctgctctttgtcccaccacgattcccagcttttc 271

                                                                       
Query: 82  tctggtgccacaccaatacctccacgattgctgatccacttgtgccaatcagtccagtca 141
           ||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||| 
Sbjct: 270 tctggcgccacaccaatacctccacggttactgatccacttgttccaatcagtccagtcg 211

                                                                       
Query: 142 tccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaagagccaa 201
           || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 210 tctacaatcttctgccactcaaatccagaaggattgaacaggaagggagcaaagagccag 151

                                                                       
Query: 202 gtgcccaccatgaaccacatggatacggtgatgaagatgtaagttatagcccctctatat 261
           ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||| || 
Sbjct: 150 gtgcccaccataaaccacatggaaacagtgatgaagatgtaagtgatagctcctctgtac 91

                                                                       
Query: 262 gactgaccaaatatttcatacacaactagtagaatcatcagctcaaggcccttgacaaaa 321
           | ||| || || ||||||||||| || || ||||||||||||||||  ||||| || |||
Sbjct: 90  gtctgtccgaaaatttcatacacgacaagcagaatcatcagctcaatacccttcacgaaa 31

                               
Query: 322 tggctgcgggaataaagtcg 341
           |||||||| ||||| |||||
Sbjct: 30  tggctgcgagaatacagtcg 11
>gb|BF616755.1|BF616755 HVSMEc0012I18f Hordeum vulgare seedling shoot EST library
           HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
           subsp. vulgare cDNA clone HVSMEc0012I18f, mRNA sequence
          Length = 762

 Score =  276 bits (139), Expect = 9e-073
 Identities = 376/455 (82%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || |  ||||| |||
Sbjct: 457 aggggctcgtgctctttctcccaccatgactcccaacttttctccggcggaacaccgata 398

                                                                       
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccac 159
           || || || ||| |||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 397 cccccgcggttggtgatccacttgttccagtcagtccagtcatccacaatcttctgccac 338

                                                                       
Query: 160 tcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccac 219
           || || |||||||| ||||||||||| || ||||||||||| ||  | ||||||||||||
Sbjct: 337 tcgaacccagaagggttgaacaggaacggcgcaaagagccaggtaacgaccatgaaccac 278

                                                                       
Query: 220 atggatacggtgatgaagatgtaagttatagcccctctatatgactgaccaaatatttca 279
           ||||| | ||| ||||||||||| |  || || ||||  || ||||| || || || |||
Sbjct: 277 atggagaaggttatgaagatgtacgcgatggctcctcggtacgactgcccgaagatctca 218

                                                                       
Query: 280 tacacaactagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagt 339
            |||| |  || |  ||||||| ||| | ||||||||| |||||||| || || || || 
Sbjct: 217 aacacgataagcaagatcatcaactcgatgcccttgacgaaatggctccgcgagtacagc 158

                                                                       
Query: 340 cgatagttctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtat 399
           ||||||||||| || || ||||||||||||||||| || ||||||||||| ||||| || 
Sbjct: 157 cgatagttctcggcgaacttggcatggaacaccacgaatccacgtccagtagctctatac 98

                                                                       
Query: 400 tccgctcctccatggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaat 459
           || ||||||||||| || | |||| |||||||  ||||||| || ||||| |  ||||||
Sbjct: 97  tcagctcctccatgtagcagcgtctttccgtaccagtgagtcttggttccgagggagaat 38

                                              
Query: 460 gtgaagaaaacagaggccaactgaagctgcatcag 494
           ||||| || || || || |||||||||||||||||
Sbjct: 37  gtgaacaagacggatgctaactgaagctgcatcag 3
>gb|BM374437.2|BM374437 EBpi03_SQ003_J24_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi03_SQ003_J24 5', mRNA sequence
          Length = 573

 Score =  214 bits (108), Expect = 3e-054
 Identities = 339/417 (81%)
 Strand = Plus / Minus

                                                                       
Query: 168 agaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatggatac 227
           |||||| ||||||||||| || ||||||||||| ||  | ||||||||||||||||| | 
Sbjct: 573 agaagggttgaacaggaacggcgcaaagagccaggtaacgaccatgaaccacatggagaa 514

                                                                       
Query: 228 ggtgatgaagatgtaagttatagcccctctatatgactgaccaaatatttcatacacaac 287
           ||| ||||||||||| |  || || ||||  || ||||| || || || ||| |||| | 
Sbjct: 513 ggttatgaagatgtacgcgatggctcctcggtacgactgcccgaagatctcaaacacgat 454

                                                                       
Query: 288 tagtagaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagtt 347
            || |  ||||||| ||| | ||||||||| |||||||| || || || || ||||||||
Sbjct: 453 aagcaagatcatcaactcgatgcccttgacgaaatggctccgcgagtacagccgatagtt 394

                                                                       
Query: 348 ctcagcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcc 407
           ||| || || ||||||||||||||||| || ||||||||||| ||||| || || |||||
Sbjct: 393 ctcggcgaacttggcatggaacaccacgaatccacgtccagtagctctatactcagctcc 334

                                                                       
Query: 408 tccatggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtgaagaa 467
           |||||| || | |||| |||||||||||||||| || ||||| |  ||||||||||||||
Sbjct: 333 tccatgtagcagcgtctttccgtagtagtgagtcttggttccgagggagaatgtgaagaa 274

                                                                       
Query: 468 aacagaggccaactgaagctgcatcagtataaaatcactcaatgcagttctgaatcctct 527
            || || || ||||||||||||||||| | ||| || |||||||| || ||||| |||||
Sbjct: 273 gacggatgctaactgaagctgcatcagcacaaagtcgctcaatgcggtcctgaaccctct 214

                                                                    
Query: 528 ctccaaaccgatttccatcatcatgggcagcgccatcaaaaatccangnngcacaaa 584
           ||||| ||| || ||||||||||| || || |||||||| || ||| |  |||||||
Sbjct: 213 ctccagaccaatctccatcatcatagggagtgccatcaagaagccaagctgcacaaa 157
>gb|BF627189.2|BF627189 HVSMEb0004D01f Hordeum vulgare seedling shoot EST library
           HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEb0004D01f, mRNA sequence
          Length = 765

 Score =  204 bits (103), Expect = 3e-051
 Identities = 178/203 (87%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || |  ||||| |||
Sbjct: 224 aggggctcgtgctctttctcccaccatgactcccaacttttctccggcgaaacaccgata 165

                                                                       
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccac 159
           || || || |||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 164 cccccgcggttgctgatccacttgttccagtcagtccagtcatccacaatcttctgccac 105

                                                                       
Query: 160 tcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccac 219
           || || |||||||| ||||||||||| || ||||||||||| ||  | ||||||||||||
Sbjct: 104 tcgaacccagaagggttgaacaggaacggcgcaaagagccaggtaacgaccatgaaccac 45

                                  
Query: 220 atggatacggtgatgaagatgta 242
           ||||| | ||| |||||||||||
Sbjct: 44  atggagaaggttatgaagatgta 22
>gb|CA027060.1|CA027060 HZ57M12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57M12
           5-PRIME, mRNA sequence
          Length = 384

 Score =  204 bits (103), Expect = 3e-051
 Identities = 178/203 (87%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || | |||||| |||
Sbjct: 278 aggggctcgtgctctttctcccaccatgactcccaacttttctccggcgacacaccgata 219

                                                                       
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccac 159
           || || || |||||||||||||||| |||  |||||||||||||||||||||||||||||
Sbjct: 218 cccccgcggttgctgatccacttgttccagacagtccagtcatccacaatcttctgccac 159

                                                                       
Query: 160 tcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccac 219
           || || |||||||| ||||||||||| || ||||||||||| ||  | ||||||||||||
Sbjct: 158 tcgaacccagaagggttgaacaggaacggcgcaaagagccaggtaacgaccatgaaccac 99

                                  
Query: 220 atggatacggtgatgaagatgta 242
           ||||| | ||| |||||||||||
Sbjct: 98  atggagaaggttatgaagatgta 76
>gb|BG369637.1|BG369637 HVSMEi0025E14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0025E14f, mRNA sequence
          Length = 725

 Score =  196 bits (99), Expect = 7e-049
 Identities = 177/203 (87%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| ||||  ||||| |||
Sbjct: 378 aggggctcgtgctctttctcccaccatgactcccaacttttctccggtgaaacaccgata 319

                                                                       
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccac 159
           || || || |||||||||||||||| ||| ||||||||||||||||||||||| ||||||
Sbjct: 318 cccccgcggttgctgatccacttgttccagtcagtccagtcatccacaatcttttgccac 259

                                                                       
Query: 160 tcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccac 219
           |  || |||||||| ||||||||||| || ||||||||||| ||  | ||||||||||||
Sbjct: 258 tggaacccagaagggttgaacaggaacggcgcaaagagccaggtagcgaccatgaaccac 199

                                  
Query: 220 atggatacggtgatgaagatgta 242
           ||||| | ||| |||||||||||
Sbjct: 198 atggagaaggttatgaagatgta 176

 Score = 77.8 bits (39), Expect = 4e-013
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                       
Query: 295 atcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctcagca 354
           ||||||| ||| | ||||||||| |||||||| || || || || ||||||||||| || 
Sbjct: 123 atcatcaactcgatgcccttgacgaaatggctccgcgagtacagccgatagttctcggcg 64

                                                                      
Query: 355 aatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctccatg 413
           || |||||||||||| |||  || ||||||||||| ||||| || || |||||||||||
Sbjct: 63  aacttggcatggaaccccaggaatccacgtccagtagctctatactcagctcctccatg 5
>gb|AV932586.1|AV932586 AV932586 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal1e06 5', mRNA sequence
          Length = 582

 Score =  127 bits (64), Expect = 5e-028
 Identities = 166/201 (82%)
 Strand = Plus / Minus

                                                                       
Query: 384 tccagtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtgagtttt 443
           |||||| ||||| || || ||||||||||| || | |||| |||||||||||||||| ||
Sbjct: 582 tccagtagctctatactcagctcctccatgtagcagcgtctttccgtagtagtgagtctt 523

                                                                       
Query: 444 tgttcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatc 503
            ||||| |  |||||||||||||| || || || ||||||||||||||||| | ||| ||
Sbjct: 522 ggttccgagggagaatgtgaagaagacggatgctaactgaagctgcatcagcacaaagtc 463

                                                                       
Query: 504 actcaatgcagttctgaatcctctctccaaaccgatttccatcatcatgggcagcgccat 563
            |||||||| || ||||| |||||||||| ||| || ||||||||||| || || |||||
Sbjct: 462 gctcaatgcggtcctgaaccctctctccagaccaatctccatcatcatagggagtgccat 403

                                
Query: 564 caaaaatccangnngcacaaa 584
           ||| || ||| |  |||||||
Sbjct: 402 caagaagccaagctgcacaaa 382
>gb|AV934137.1|AV934137 AV934137 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal11c09 5', mRNA sequence
          Length = 589

 Score =  121 bits (61), Expect = 3e-026
 Identities = 151/182 (82%)
 Strand = Plus / Minus

                                                                       
Query: 403 gctcctccatggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtg 462
           ||||||||||| || | |||| |||||||||||||||| || ||||| |  |||||||||
Sbjct: 575 gctcctccatgtagcagcgtctttccgtagtagtgagtcttggttccgagggagaatgtg 516

                                                                       
Query: 463 aagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgcagttctgaat 522
           ||||| || || || ||||||||||||||||| | ||| || |||||||| || ||||| 
Sbjct: 515 aagaagacggatgctaactgaagctgcatcagcacaaagtcgctcaatgcggtcctgaac 456

                                                                       
Query: 523 cctctctccaaaccgatttccatcatcatgggcagcgccatcaaaaatccangnngcaca 582
           |||||||||| ||| || ||||||||||| || || |||||||| || ||| |  |||||
Sbjct: 455 cctctctccagaccaatctccatcatcatagggagtgccatcaagaagccaagctgcaca 396

             
Query: 583 aa 584
           ||
Sbjct: 395 aa 394
>gb|BF265457.3|BF265457 HV_CEa0012F07f Hordeum vulgare seedling green leaf EST library
           HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
           vulgare cDNA clone HV_CEa0012F07f, mRNA sequence
          Length = 654

 Score =  107 bits (54), Expect = 5e-022
 Identities = 93/106 (87%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || |  ||||| |||
Sbjct: 106 aggggctcgtgctctttctcccaccatgactcccaacttttctccggcgaaacaccgata 47

                                                         
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccagtcatcca 145
           || || || |||||||||||||||| ||| ||||||||||||||||
Sbjct: 46  cccccgcggttgctgatccacttgttccagtcagtccagtcatcca 1
>gb|BG418430.1|BG418430 HVSMEk0022K21f Hordeum vulgare testa/pericarp EST library
           HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
           clone HVSMEk0022K21f, mRNA sequence
          Length = 507

 Score = 93.7 bits (47), Expect = 7e-018
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                       
Query: 40  aggggctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaata 99
           |||||||| |||||||| ||||||||||||||||| |||||||| || |  ||||| |||
Sbjct: 99  aggggctcgtgctctttctcccaccatgactcccaacttttctccggcgaaacaccgata 40

                                                  
Query: 100 cctccacgattgctgatccacttgtgccaatcagtccag 138
           || || || |||||||||||||||| ||| |||||||||
Sbjct: 39  cccccgcggttgctgatccacttgttccagtcagtccag 1
>gb|BJ470174.1|BJ470174 BJ470174 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal15l17 5', mRNA sequence
          Length = 537

 Score = 91.7 bits (46), Expect = 3e-017
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 454 gagaatgtgaagaaaacagaggccaactgaagctgcatcagtataaaatcactcaatgca 513
           |||||||||||||| || || || ||||||||||||||||| | ||| || |||||||| 
Sbjct: 535 gagaatgtgaagaagacggatgctaactgaagctgcatcagcacaaagtcgctcaatgcg 476

                                                                       
Query: 514 gttctgaatcctctctccaaaccgatttccatcatcatgggcagcgccatcaaaaatcca 573
           || ||||| |||||||||| ||| || ||||||||||| || || |||||||| || |||
Sbjct: 475 gtcctgaaccctctctccagaccaatctccatcatcatagggagtgccatcaagaagcca 416

                      
Query: 574 ngnngcacaaa 584
            |  |||||||
Sbjct: 415 agctgcacaaa 405
>gb|BU999201.1|BU999201 HI13K20r HI Hordeum vulgare subsp. vulgare cDNA clone HI13K20
           5-PRIME, mRNA sequence
          Length = 152

 Score = 81.8 bits (41), Expect = 3e-014
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                       
Query: 47  cctgctctttttcccaccatgactcccagcttttctctggtgccacaccaatacctccac 106
           |||||||||| ||||||||  | ||||||||||||||||| |||||||||||||||||||
Sbjct: 63  cctgctctttgtcccaccaccattcccagcttttctctggcgccacaccaatacctccac 4

            
Query: 107 g 107
           |
Sbjct: 3   g 3
>gb|BU982241.1|BU982241 HA25P01r HA Hordeum vulgare subsp. vulgare cDNA clone HA25P01
           5-PRIME, mRNA sequence
          Length = 300

 Score = 61.9 bits (31), Expect = 3e-008
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 457 aatgtgaagaaaacagaggccaactgaagctgcat 491
           ||||||||||| |||||||||||||||||||||||
Sbjct: 166 aatgtgaagaacacagaggccaactgaagctgcat 132
>gb|AV926707.1|AV926707 AV926707 K. Sato unpublished cDNA library, cv. Haruna Nijo second
          leaf stage seedling leaves Hordeum vulgare subsp.
          vulgare cDNA clone basd23h13 5', mRNA sequence
          Length = 495

 Score = 58.0 bits (29), Expect = 4e-007
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                   
Query: 40 aggggctcctgctctttttcccaccatgactcccagctttt 80
          |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 54 aggggctcgtgctctttctcccaccatgactcccaactttt 14
>gb|AV926708.1|AV926708 AV926708 K. Sato unpublished cDNA library, cv. Haruna Nijo second
          leaf stage seedling leaves Hordeum vulgare subsp.
          vulgare cDNA clone basd23h14 5', mRNA sequence
          Length = 300

 Score = 58.0 bits (29), Expect = 4e-007
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                   
Query: 40 aggggctcctgctctttttcccaccatgactcccagctttt 80
          |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 55 aggggctcgtgctctttctcccaccatgactcccaactttt 15
>gb|AV836635.1|AV836635 AV836635 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
           vulgare seedling leaves second leaf stage Hordeum
           vulgare subsp. vulgare cDNA clone basd19k01, mRNA
           sequence
          Length = 644

 Score = 50.1 bits (25), Expect = 1e-004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
           ||||||||||| ||||||||||| || || |||||||||||
Sbjct: 639 acaaaatggcttcgggaataaagacggtaattctcagcaaa 599
>gb|BE215834.2|BE215834 HV_CEb0008J21f Hordeum vulgare seedling green leaf EST library
           HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
           vulgare cDNA clone HV_CEb0008J21f, mRNA sequence
          Length = 504

 Score = 50.1 bits (25), Expect = 1e-004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
           ||||||||||| ||||||||||| || || |||||||||||
Sbjct: 317 acaaaatggcttcgggaataaagacggtaattctcagcaaa 277
>gb|CA031522.1|CA031522 HX10D22r HX Hordeum vulgare subsp. vulgare cDNA clone HX10D22
           5-PRIME, mRNA sequence
          Length = 478

 Score = 50.1 bits (25), Expect = 1e-004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
           ||||||||||| ||||||||||| || || |||||||||||
Sbjct: 160 acaaaatggcttcgggaataaagacggtaattctcagcaaa 120
>gb|AY177665.1| Hordeum vulgare subsp. vulgare putative callose synthase mRNA,
            complete cds
          Length = 6180

 Score = 50.1 bits (25), Expect = 1e-004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 316  acaaaatggctgcgggaataaagtcgatagttctcagcaaa 356
            ||||||||||| ||||||||||| || || |||||||||||
Sbjct: 4981 acaaaatggcttcgggaataaagacggtaattctcagcaaa 4941
>gb|BM928837.1|BM928837 LP10011 Lemma/palea-enriched cDNA library from elongation stage
          of kernel Hordeum vulgare subsp. vulgare cDNA clone
          1-11 similar to alanine aminotransferase, mRNA sequence
          Length = 354

 Score = 38.2 bits (19), Expect = 0.37
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  gcggccgcccgggaggtac 19
          |||||||||||||||||||
Sbjct: 5  gcggccgcccgggaggtac 23
  Database: Hordeum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:16 PM
  Number of letters in database: 175,134,539
  Number of sequences in database:  312,970
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 60,473
Number of Sequences: 312970
Number of extensions: 60473
Number of successful extensions: 16275
Number of sequences better than  0.5: 22
Number of HSP's better than  0.5 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16244
Number of HSP's gapped (non-prelim): 31
length of query: 690
length of database: 175,134,539
effective HSP length: 19
effective length of query: 671
effective length of database: 169,188,109
effective search space: 113525221139
effective search space used: 113525221139
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)