BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBF12h04.xg.3.2
(747 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 70 1e-010
gb|BM443710.1|BM443710 EBem09_SQ001_E01_R embryo, 1 Day ger... 52 3e-005
gb|BM369716.2|BM369716 EBem07_SQ004_G13_R embryo, 28 DPA, n... 52 3e-005
gb|BM444977.2|BM444977 EBem09_SQ007_B04_R embryo, 1 Day ger... 52 3e-005
gb|BM445039.2|BM445039 EBem09_SQ007_E02_R embryo, 1 Day ger... 52 3e-005
gb|BM370828.2|BM370828 EBro04_SQ002_G18_R root, 3 week, sal... 52 3e-005
gb|BQ767410.1|BQ767410 EBro08_SQ008_G23_R root, 3 week, dro... 52 3e-005
gb|AJ228957.1|AJ228957 AJ228957 Barley leaf, 8 day old seed... 50 1e-004
gb|BF627621.2|BF627621 HVSMEb0005F16f Hordeum vulgare seedl... 50 1e-004
gb|BF630148.2|BF630148 HVSMEb0008C01f Hordeum vulgare seedl... 50 1e-004
gb|BF620426.2|BF620426 HVSMEc0019N04f Hordeum vulgare seedl... 50 1e-004
gb|BE060713.2|BE060713 HVSMEg0013B13f Hordeum vulgare pre-a... 50 1e-004
gb|BF629382.3|BF629382 HVSMEb0012B12f Hordeum vulgare seedl... 50 1e-004
gb|BF253985.3|BF253985 HVSMEf0002K21f Hordeum vulgare seedl... 50 1e-004
gb|BF255218.3|BF255218 HVSMEf0006E09f Hordeum vulgare seedl... 50 1e-004
gb|BG343239.2|BG343239 HVSMEg0005D03f Hordeum vulgare pre-a... 50 1e-004
gb|BM101062.1|BM101062 EBpi01_SQ002_M08_R pistil, 1 DPA, no... 50 1e-004
gb|BM376417.1|BM376417 EBem05_SQ002_C18_R embryo, 14 DPA, n... 50 1e-004
gb|BM376821.1|BM376821 EBem05_SQ003_F09_R embryo, 14 DPA, n... 50 1e-004
gb|AV926160.1|AV926160 AV926160 K. Sato unpublished cDNA li... 50 1e-004
gb|AV926168.1|AV926168 AV926168 K. Sato unpublished cDNA li... 50 1e-004
gb|AV931042.1|AV931042 AV931042 K. Sato unpublished cDNA li... 50 1e-004
gb|AV931049.1|AV931049 AV931049 K. Sato unpublished cDNA li... 50 1e-004
gb|AV932366.1|AV932366 AV932366 K. Sato unpublished cDNA li... 50 1e-004
gb|AV932732.1|AV932732 AV932732 K. Sato unpublished cDNA li... 50 1e-004
gb|AV934838.1|AV934838 AV934838 K. Sato unpublished cDNA li... 50 1e-004
gb|BM444210.1|BM444210 EBem09_SQ004_H19_R embryo, 1 Day ger... 50 1e-004
gb|BM444702.1|BM444702 EBem09_SQ006_D18_R embryo, 1 Day ger... 50 1e-004
gb|AJ434164.1|AJ434164 AJ434164 S00002 Hordeum vulgare subs... 50 1e-004
gb|AJ461505.1|AJ461505 AJ461505 S00002 Hordeum vulgare subs... 50 1e-004
gb|AJ461506.1|AJ461506 AJ461506 S00002 Hordeum vulgare subs... 50 1e-004
gb|AJ461507.1|AJ461507 AJ461507 S00002 Hordeum vulgare subs... 50 1e-004
gb|BJ470410.1|BJ470410 BJ470410 K. Sato unpublished cDNA li... 50 1e-004
gb|BJ472967.1|BJ472967 BJ472967 K. Sato unpublished cDNA li... 50 1e-004
gb|BJ474219.1|BJ474219 BJ474219 K. Sato unpublished cDNA li... 50 1e-004
gb|BJ474749.1|BJ474749 BJ474749 K. Sato unpublished cDNA li... 50 1e-004
gb|BJ477128.1|BJ477128 BJ477128 K. Sato unpublished cDNA li... 50 1e-004
gb|BQ459694.1|BQ459694 HA08F12r HA Hordeum vulgare subsp. v... 50 1e-004
gb|BQ464042.1|BQ464042 HF01D02T HF Hordeum vulgare subsp. v... 50 1e-004
gb|BQ468022.1|BQ468022 HR01K24r HR Hordeum vulgare subsp. v... 50 1e-004
gb|BQ471079.1|BQ471079 HX04O11r HX Hordeum vulgare subsp. v... 50 1e-004
gb|BQ659646.1|BQ659646 HF01D02w HF Hordeum vulgare subsp. v... 50 1e-004
gb|BQ662132.1|BQ662132 HR01K24u HR Hordeum vulgare subsp. v... 50 1e-004
gb|BQ662161.1|BQ662161 HR01N05u HR Hordeum vulgare subsp. v... 50 1e-004
gb|BM376627.2|BM376627 EBem05_SQ002_M04_R embryo, 14 DPA, n... 50 1e-004
gb|BM376815.2|BM376815 EBem05_SQ003_F03_R embryo, 14 DPA, n... 50 1e-004
gb|BM375954.2|BM375954 EBem06_SQ004_O08_R embryo, 21 DPA, n... 50 1e-004
gb|BM445036.2|BM445036 EBem09_SQ007_D23_R embryo, 1 Day ger... 50 1e-004
gb|BI779601.2|BI779601 EBro01_SQ004_I17_R root, 3 week, hyd... 50 1e-004
gb|BI777316.2|BI777316 EBro03_SQ002_N17_R root, 3 week, wat... 50 1e-004
gb|BM372109.2|BM372109 EBro03_SQ004_A21_R root, 3 week, wat... 50 1e-004
gb|BI778091.2|BI778091 EBro07_SQ002_D07_R root, 3 week, red... 50 1e-004
gb|BM370287.2|BM370287 EBro08_SQ003_L18_R root, 3 week, dro... 50 1e-004
gb|BM370438.2|BM370438 EBro08_SQ004_D19_R root, 3 week, dro... 50 1e-004
gb|BQ756972.1|BQ756972 EBem10_SQ002_F23_R embryo, 2 Day ger... 50 1e-004
gb|BQ760526.1|BQ760526 EBro03_SQ001_C06_R root, 3 week, wat... 50 1e-004
gb|BQ761384.1|BQ761384 EBro06_SQ001_J04_R root, 3 week, dro... 50 1e-004
gb|BQ763655.1|BQ763655 EBro03_SQ005_F03_R root, 3 week, wat... 50 1e-004
gb|BQ765241.1|BQ765241 EBro03_SQ006_J13_R root, 3 week, wat... 50 1e-004
gb|BQ766259.1|BQ766259 EBro08_SQ005_A14_R root, 3 week, dro... 50 1e-004
gb|BQ767130.1|BQ767130 EBro08_SQ008_F01_R root, 3 week, dro... 50 1e-004
gb|BQ767937.1|BQ767937 EBro08_SQ010_B10_R root, 3 week, dro... 50 1e-004
gb|BU985377.1|BU985377 HF06P11r HF Hordeum vulgare subsp. v... 50 1e-004
gb|BU994818.1|BU994818 HM08E24r HM Hordeum vulgare subsp. v... 50 1e-004
gb|BU996965.1|BU996965 HI06H03r HI Hordeum vulgare subsp. v... 50 1e-004
gb|CA025742.1|CA025742 HZ53A08r HZ Hordeum vulgare subsp. v... 50 1e-004
gb|CA030460.1|CA030460 HX07C04r HX Hordeum vulgare subsp. v... 50 1e-004
gb|CA030746.1|CA030746 HX08A04r HX Hordeum vulgare subsp. v... 50 1e-004
emb|AJ250663.2|HVU250663 Hordeum vulgare partial mRNA for p... 50 1e-004
gb|BE194539.2|BE194539 HVSMEh0085O20f Hordeum vulgare 5-45 ... 44 0.007
gb|BE601851.2|BE601851 HVSMEh0099M09f Hordeum vulgare 5-45 ... 44 0.007
gb|BG368411.1|BG368411 HVSMEi0018I07f Hordeum vulgare 20 DA... 44 0.007
gb|BI947456.1|BI947456 HVSMEl0005I19f Hordeum vulgare spike... 44 0.007
gb|BI947457.1|BI947457 HVSMEl0005I20f Hordeum vulgare spike... 44 0.007
gb|BI947816.1|BI947816 HVSMEl0007B05f Hordeum vulgare spike... 44 0.007
gb|BI948187.1|BI948187 HVSMEl0008I15f Hordeum vulgare spike... 44 0.007
gb|BE193444.3|BE193444 HVSMEh0081A11f Hordeum vulgare 5-45 ... 44 0.007
gb|BE454706.3|BE454706 HVSMEh0095E16f Hordeum vulgare 5-45 ... 44 0.007
gb|BE602377.3|BE602377 HVSMEh0098L03f Hordeum vulgare 5-45 ... 44 0.007
gb|BQ472544.1|BQ472544 HB09D23T BC Hordeum vulgare subsp. v... 44 0.007
gb|BQ658415.1|BQ658415 HB09D23w BC Hordeum vulgare subsp. v... 44 0.007
gb|BM441663.2|BM441663 EBed07_SQ001_D04_R endosperm, 28 DPA... 44 0.007
gb|BM441791.2|BM441791 EBed07_SQ001_J02_R endosperm, 28 DPA... 44 0.007
gb|BM441894.2|BM441894 EBed07_SQ001_N15_R endosperm, 28 DPA... 44 0.007
gb|BM372169.2|BM372169 EBro03_SQ004_D11_R root, 3 week, wat... 44 0.007
gb|BQ755384.1|BQ755384 EBed07_SQ002_P09_R endosperm, 28 DPA... 44 0.007
gb|BQ755912.1|BQ755912 EBed07_SQ003_O19_R endosperm, 28 DPA... 44 0.007
gb|BQ762412.1|BQ762412 EBro01_SQ005_D20_R root, 3 week, hyd... 44 0.007
gb|BU968349.1|BU968349 HB07D23r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU969505.1|BU969505 HB11L11r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU970476.1|BU970476 HB14M02r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU970665.1|BU970665 HB15F05r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU971398.1|BU971398 HB17H22r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU972413.1|BU972413 HB21J05r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU973249.1|BU973249 HB24E11r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU973925.1|BU973925 HB26G19r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU974452.1|BU974452 HB27P16r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU984628.1|BU984628 HF04H21r HF Hordeum vulgare subsp. v... 44 0.007
gb|BU986417.1|BU986417 HF11M02r HF Hordeum vulgare subsp. v... 44 0.007
gb|BU988889.1|BU988889 HF19A15r HF Hordeum vulgare subsp. v... 44 0.007
gb|BU988991.1|BU988991 HF19G15r HF Hordeum vulgare subsp. v... 44 0.007
gb|BU990351.1|BU990351 HF24M11r HF Hordeum vulgare subsp. v... 44 0.007
gb|CV055669.1|CV055669 BNEL122b6 Barley EST endosperm libra... 44 0.007
gb|CV058132.1|CV058132 BNEL34f7 Barley EST endosperm librar... 44 0.007
gb|CV058982.1|CV058982 BNEL43b11 Barley EST endosperm libra... 44 0.007
gb|CV059214.1|CV059214 BNEL45f5 Barley EST endosperm librar... 44 0.007
emb|X05404.1|HVCI2A Barley mRNA or chymotrypsin inhibitor-2... 44 0.007
emb|X05405.1|HVCI2B Barley mRNA fragment for chymotrypsin i... 44 0.007
emb|X57035.1|HVICA2 H.vulgare chymotryposin inhibitor-2 gene 44 0.007
gb|BF253673.3|BF253673 HVSMEf0001M20f Hordeum vulgare seedl... 42 0.026
gb|BF259270.3|BF259270 HVSMEf0018K10f Hordeum vulgare seedl... 42 0.026
gb|BQ739946.1|BQ739946 HB05F11 HB Hordeum vulgare subsp. vu... 42 0.026
gb|BQ763683.1|BQ763683 EBro03_SQ005_K03_R root, 3 week, wat... 42 0.026
gb|CD662709.1|CD662709 UCRHV18_02de02_b1 Drought-stressed D... 42 0.026
gb|BE422411.1|BE422411 HWM024cE.03r ITEC HWM Barley Leaf Li... 40 0.10
gb|BE437706.1|BE437706 SFR006.F06F990625 ITEC SFR Barley Le... 40 0.10
gb|AL501949.1|AL501949 AL501949 Hordeum vulgare Barke roots... 40 0.10
gb|BF253594.3|BF253594 HVSMEf0001J10f Hordeum vulgare seedl... 40 0.10
gb|BF255110.2|BF255110 HVSMEf0005P18f Hordeum vulgare seedl... 40 0.10
gb|BG415609.2|BG415609 HVSMEk0007C19f Hordeum vulgare testa... 40 0.10
gb|AV922866.1|AV922866 AV922866 K. Sato unpublished cDNA li... 40 0.10
gb|AV923621.1|AV923621 AV923621 K. Sato unpublished cDNA li... 40 0.10
gb|AV923705.1|AV923705 AV923705 K. Sato unpublished cDNA li... 40 0.10
gb|AV926889.1|AV926889 AV926889 K. Sato unpublished cDNA li... 40 0.10
gb|AV927237.1|AV927237 AV927237 K. Sato unpublished cDNA li... 40 0.10
gb|AV927586.1|AV927586 AV927586 K. Sato unpublished cDNA li... 40 0.10
gb|AV928068.1|AV928068 AV928068 K. Sato unpublished cDNA li... 40 0.10
gb|BM444597.1|BM444597 EBem09_SQ005_N12_R embryo, 1 Day ger... 40 0.10
gb|BM816086.1|BM816086 HC111B02_T3.ab1 HC Hordeum vulgare s... 40 0.10
gb|AJ434274.1|AJ434274 AJ434274 S00002 Hordeum vulgare subs... 40 0.10
gb|AJ434825.1|AJ434825 AJ434825 S00002 Hordeum vulgare subs... 40 0.10
gb|AJ434987.1|AJ434987 AJ434987 S00002 Hordeum vulgare subs... 40 0.10
gb|BQ471628.1|BQ471628 HV02P22r HV Hordeum vulgare subsp. v... 40 0.10
gb|BQ661790.1|BQ661790 HP01E21w HP Hordeum vulgare subsp. v... 40 0.10
gb|BM445110.2|BM445110 EBem09_SQ007_H13_R embryo, 1 Day ger... 40 0.10
gb|BI777232.2|BI777232 EBro03_SQ002_I10_R root, 3 week, wat... 40 0.10
gb|BI777577.2|BI777577 EBro04_SQ001_K08_R root, 3 week, sal... 40 0.10
gb|BM370986.2|BM370986 EBro04_SQ003_C07_R root, 3 week, sal... 40 0.10
gb|BI777881.2|BI777881 EBro07_SQ001_B07_R root, 3 week, red... 40 0.10
gb|BI777965.2|BI777965 EBro07_SQ001_J02_R root, 3 week, red... 40 0.10
gb|BQ761219.1|BQ761219 EBro04_SQ004_L19_R root, 3 week, sal... 40 0.10
gb|BQ765905.1|BQ765905 EBro03_SQ008_B13_R root, 3 week, wat... 40 0.10
gb|BQ766171.1|BQ766171 EBro08_SQ005_A11_R root, 3 week, dro... 40 0.10
gb|BQ767139.1|BQ767139 EBro08_SQ008_G04_R root, 3 week, dro... 40 0.10
gb|CA016440.1|CA016440 HV09A03u HV Hordeum vulgare subsp. v... 40 0.10
gb|CA018566.1|CA018566 HV09A03r HV Hordeum vulgare subsp. v... 40 0.10
gb|CA018873.1|CA018873 HV09O12r HV Hordeum vulgare subsp. v... 40 0.10
gb|BE421400.1|BE421400 HWM008.H09 ITEC HWM Barley Leaf Libr... 38 0.40
gb|AL502298.1|AL502298 AL502298 Hordeum vulgare Barke roots... 38 0.40
gb|AL504135.1|AL504135 AL504135 Hordeum vulgare Barke roots... 38 0.40
gb|AL505016.1|AL505016 AL505016 Hordeum vulgare Barke roots... 38 0.40
gb|AL505049.1|AL505049 AL505049 Hordeum vulgare Barke roots... 38 0.40
gb|AL505292.1|AL505292 AL505292 Hordeum vulgare Barke roots... 38 0.40
gb|AL505580.1|AL505580 AL505580 Hordeum vulgare Barke roots... 38 0.40
gb|AL505679.1|AL505679 AL505679 Hordeum vulgare Barke roots... 38 0.40
gb|AL507810.1|AL507810 AL507810 Hordeum vulgare Barke devel... 38 0.40
gb|BF257305.1|BF257305 HVSMEf0012H21f Hordeum vulgare seedl... 38 0.40
gb|BI947171.1|BI947171 HVSMEl0004A08f Hordeum vulgare spike... 38 0.40
gb|BI955999.1|BI955999 HVSMEm0025F08f Hordeum vulgare green... 38 0.40
gb|BE231068.2|BE231068 HVSMEg0016F01f Hordeum vulgare pre-a... 38 0.40
gb|BG300496.2|BG300496 HVSMEb0017E05f Hordeum vulgare seedl... 38 0.40
gb|BF258541.3|BF258541 HVSMEf0016A06f Hordeum vulgare seedl... 38 0.40
gb|BF259191.3|BF259191 HVSMEf0018A20f Hordeum vulgare seedl... 38 0.40
gb|AW982622.3|AW982622 HVSMEg0003M08f Hordeum vulgare pre-a... 38 0.40
gb|AW983488.3|AW983488 HVSMEg0010N02f Hordeum vulgare pre-a... 38 0.40
gb|BE060260.3|BE060260 HVSMEg0011M06f Hordeum vulgare pre-a... 38 0.40
gb|BE455734.3|BE455734 HVSMEg0019G16f Hordeum vulgare pre-a... 38 0.40
gb|BG365348.2|BG365348 HVSMEi0002F23f Hordeum vulgare 20 DA... 38 0.40
gb|BG416114.2|BG416114 HVSMEk0009N05f Hordeum vulgare testa... 38 0.40
gb|AV914755.1|AV914755 AV914755 K. Sato unpublished cDNA li... 38 0.40
gb|AV915916.1|AV915916 AV915916 K. Sato unpublished cDNA li... 38 0.40
gb|AV919122.1|AV919122 AV919122 K. Sato unpublished cDNA li... 38 0.40
gb|AV919853.1|AV919853 AV919853 K. Sato unpublished cDNA li... 38 0.40
gb|AV921033.1|AV921033 AV921033 K. Sato unpublished cDNA li... 38 0.40
gb|AV926554.1|AV926554 AV926554 K. Sato unpublished cDNA li... 38 0.40
gb|AV931442.1|AV931442 AV931442 K. Sato unpublished cDNA li... 38 0.40
gb|AJ432985.1|AJ432985 AJ432985 S00002 Hordeum vulgare subs... 38 0.40
gb|AJ460659.1|AJ460659 AJ460659 S00002 Hordeum vulgare subs... 38 0.40
gb|AJ460660.1|AJ460660 AJ460660 S00002 Hordeum vulgare subs... 38 0.40
gb|AJ460661.1|AJ460661 AJ460661 S00002 Hordeum vulgare subs... 38 0.40
gb|AJ460662.1|AJ460662 AJ460662 S00002 Hordeum vulgare subs... 38 0.40
gb|BJ464523.1|BJ464523 BJ464523 K. Sato unpublished cDNA li... 38 0.40
gb|BJ464703.1|BJ464703 BJ464703 K. Sato unpublished cDNA li... 38 0.40
gb|BJ465454.1|BJ465454 BJ465454 K. Sato unpublished cDNA li... 38 0.40
gb|BJ468087.1|BJ468087 BJ468087 K. Sato unpublished cDNA li... 38 0.40
gb|BJ468701.1|BJ468701 BJ468701 K. Sato unpublished cDNA li... 38 0.40
gb|BQ459331.1|BQ459331 HA01H03r HA Hordeum vulgare subsp. v... 38 0.40
gb|BQ459871.1|BQ459871 HA07N15r HA Hordeum vulgare subsp. v... 38 0.40
gb|BQ460421.1|BQ460421 HA09K22r HA Hordeum vulgare subsp. v... 38 0.40
gb|BQ464982.1|BQ464982 HU02F04r HU Hordeum vulgare subsp. v... 38 0.40
gb|BQ465865.1|BQ465865 HU04O12r HU Hordeum vulgare subsp. v... 38 0.40
gb|BQ465933.1|BQ465933 HT01B17T HT Hordeum vulgare subsp. v... 38 0.40
gb|BQ468854.1|BQ468854 HM02I24r HM Hordeum vulgare subsp. v... 38 0.40
gb|BQ469906.1|BQ469906 HX01D09T HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ470121.1|BQ470121 HX01N10T HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ470288.1|BQ470288 HX02G23r HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ470986.1|BQ470986 HX04K03r HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ471120.1|BQ471120 HV01B12T HV Hordeum vulgare subsp. v... 38 0.40
gb|BQ471443.1|BQ471443 HV02H03r HV Hordeum vulgare subsp. v... 38 0.40
gb|BQ471668.1|BQ471668 HV03B22r HV Hordeum vulgare subsp. v... 38 0.40
gb|BQ662983.1|BQ662983 HT01B17w HT Hordeum vulgare subsp. v... 38 0.40
gb|BQ663352.1|BQ663352 HU02F04u HU Hordeum vulgare subsp. v... 38 0.40
gb|BQ664875.1|BQ664875 HX01D09w HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ665024.1|BQ665024 HX01N10w HX Hordeum vulgare subsp. v... 38 0.40
gb|BQ665178.1|BQ665178 HX02G23u HX Hordeum vulgare subsp. v... 38 0.40
gb|BM368049.2|BM368049 EBed01_SQ002_A07_R endosperm, 6 DPA,... 38 0.40
gb|BI776268.2|BI776268 EBem04_SQ001_E12_R embryo, 12 DPA, n... 38 0.40
gb|BM097858.2|BM097858 EBem04_SQ002_O13_R embryo, 12 DPA, n... 38 0.40
gb|BM377605.2|BM377605 EBem04_SQ003_K07_R embryo, 12 DPA, n... 38 0.40
gb|BM377615.2|BM377615 EBem04_SQ003_K17_R embryo, 12 DPA, n... 38 0.40
gb|BM377896.2|BM377896 EBem04_SQ004_I06_R embryo, 12 DPA, n... 38 0.40
gb|BM376792.2|BM376792 EBem05_SQ003_E03_R embryo, 14 DPA, n... 38 0.40
gb|BM377376.2|BM377376 EBem05_SQ004_P05_R embryo, 14 DPA, n... 38 0.40
gb|BI780394.2|BI780394 EBem06_SQ001_M01_R embryo, 21 DPA, n... 38 0.40
gb|BM375855.2|BM375855 EBem06_SQ004_J17_R embryo, 21 DPA, n... 38 0.40
gb|BM375912.2|BM375912 EBem06_SQ004_M05_R embryo, 21 DPA, n... 38 0.40
gb|BM369279.2|BM369279 EBem07_SQ003_C02_R embryo, 28 DPA, n... 38 0.40
gb|BM368907.2|BM368907 EBem08_SQ004_P12_R embryo, 40 DPA, n... 38 0.40
gb|BM443789.2|BM443789 EBem09_SQ001_I09_R embryo, 1 Day ger... 38 0.40
gb|BM099216.2|BM099216 EBes01_SQ002_J04_R embryo sac, 4-6 D... 38 0.40
gb|BM098939.2|BM098939 EBpi05_SQ002_H21_R pistil, 8 DPA, no... 38 0.40
gb|BM372626.2|BM372626 EBpi05_SQ003_H20_R pistil, 8 DPA, no... 38 0.40
gb|BM442827.2|BM442827 EBro02_SQ001_H01_R root, 3 week, hyd... 38 0.40
gb|BI778186.2|BI778186 EBro07_SQ002_H14_R root, 3 week, red... 38 0.40
gb|BI777650.2|BI777650 EBro08_SQ001_D03_R root, 3 week, dro... 38 0.40
gb|BQ754093.1|BQ754093 EBca01_SQ002_N04_R carpel, pre-anthe... 38 0.40
gb|BQ754342.1|BQ754342 EBca01_SQ003_K08_R carpel, pre-anthe... 38 0.40
gb|BQ756315.1|BQ756315 EBem07_SQ003_B02_R embryo, 28 DPA, n... 38 0.40
gb|BQ757984.1|BQ757984 EBem10_SQ005_O17_R embryo, 2 Day ger... 38 0.40
gb|BQ758418.1|BQ758418 EBma05_SQ003_D21_R maternal, 12 DPA,... 38 0.40
gb|BQ758452.1|BQ758452 EBma05_SQ003_O20_R maternal, 12 DPA,... 38 0.40
gb|BQ758796.1|BQ758796 EBma07_SQ002_H22_R maternal, 21 DPA,... 38 0.40
gb|BQ760841.1|BQ760841 EBro03_SQ003_K02_R root, 3 week, wat... 38 0.40
gb|BQ761481.1|BQ761481 EBro08_SQ001_D06_R root, 3 week, dro... 38 0.40
gb|BQ762288.1|BQ762288 EBro01_SQ005_J08_R root, 3 week, hyd... 38 0.40
gb|BQ764733.1|BQ764733 EBca01_SQ004_B19_R carpel, pre-anthe... 38 0.40
gb|BQ767020.1|BQ767020 EBro08_SQ007_C19_R root, 3 week, dro... 38 0.40
gb|BQ768287.1|BQ768287 EBro08_SQ011_E08_R root, 3 week, dro... 38 0.40
gb|BU967691.1|BU967691 HB05B17r BC Hordeum vulgare subsp. v... 38 0.40
gb|BU968962.1|BU968962 HB10B22r BC Hordeum vulgare subsp. v... 38 0.40
gb|BU970734.1|BU970734 HB15I11r BC Hordeum vulgare subsp. v... 38 0.40
gb|BU976132.1|BU976132 HA03D04r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU978288.1|BU978288 HA12O03r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU978942.1|BU978942 HA14L11r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU978946.1|BU978946 HA14L15r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979014.1|BU979014 HA14O16r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979239.1|BU979239 HA15I18r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979524.1|BU979524 HA16G24r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979632.1|BU979632 HA16M11r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU979971.1|BU979971 HA18A11r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU980301.1|BU980301 HA20E10r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU980766.1|BU980766 HA21K03r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU981127.1|BU981127 HA22L12r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU981617.1|BU981617 HA24C06r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU981648.1|BU981648 HA24D17r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU982603.1|BU982603 HA27A21r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU982814.1|BU982814 HA27L02r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU983271.1|BU983271 HA29C10r HA Hordeum vulgare subsp. v... 38 0.40
gb|BU984426.1|BU984426 HF03O09r HF Hordeum vulgare subsp. v... 38 0.40
gb|BU986329.1|BU986329 HF11H02r HF Hordeum vulgare subsp. v... 38 0.40
gb|BU986818.1|BU986818 HF12P23r HF Hordeum vulgare subsp. v... 38 0.40
gb|BU987958.1|BU987958 HF16E08r HF Hordeum vulgare subsp. v... 38 0.40
gb|BU989128.1|BU989128 HF19O05r HF Hordeum vulgare subsp. v... 38 0.40
gb|CA002690.1|CA002690 HS08D24r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA003005.1|CA003005 HS09C05r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA004045.1|CA004045 HS16G01r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA004167.1|CA004167 HS16M12r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA004175.1|CA004175 HS16M21r HS Hordeum vulgare subsp. v... 38 0.40
gb|CA015867.1|CA015867 HV11M06u HV Hordeum vulgare subsp. v... 38 0.40
gb|CA017755.1|CA017755 HV06C14r HV Hordeum vulgare subsp. v... 38 0.40
gb|CA018040.1|CA018040 HV07D16r HV Hordeum vulgare subsp. v... 38 0.40
gb|CA019367.1|CA019367 HV11M06r HV Hordeum vulgare subsp. v... 38 0.40
gb|CA021490.1|CA021490 HZ40E02r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA022342.1|CA022342 HZ42N13r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA024158.1|CA024158 HZ48I11r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA024303.1|CA024303 HZ48O22r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA025040.1|CA025040 HZ51A20r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA025065.1|CA025065 HZ51B22r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA025326.1|CA025326 HZ51M24r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA026266.1|CA026266 HZ55G15r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA028174.1|CA028174 HZ61D10r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA028245.1|CA028245 HZ61G18r HZ Hordeum vulgare subsp. v... 38 0.40
gb|CA031268.1|CA031268 HX09H13r HX Hordeum vulgare subsp. v... 38 0.40
gb|CB858610.1|CB858610 HI07L02w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB859080.1|CB859080 HI09E02w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB859514.1|CB859514 HI10L10w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB859577.1|CB859577 HI10O08w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB859819.1|CB859819 HI11L07w HI Hordeum vulgare subsp. v... 38 0.40
gb|CB875595.1|CB875595 HX08M15w HX Hordeum vulgare subsp. v... 38 0.40
gb|CB875829.1|CB875829 HX09H13w HX Hordeum vulgare subsp. v... 38 0.40
gb|CB875874.1|CB875874 HX09J21w HX Hordeum vulgare subsp. v... 38 0.40
gb|CB876020.1|CB876020 HX10A18w HX Hordeum vulgare subsp. v... 38 0.40
gb|CB876459.1|CB876459 HX11F10w HX Hordeum vulgare subsp. v... 38 0.40
gb|CB880097.1|CB880097 HM05H17w HM Hordeum vulgare subsp. v... 38 0.40
gb|CB882120.1|CB882120 HM11O20w HM Hordeum vulgare subsp. v... 38 0.40
gb|CB882332.1|CB882332 HL01J02w HL Hordeum vulgare subsp. v... 38 0.40
gb|CV053571.1|CV053571 BNEL100g3 Barley EST endosperm libra... 38 0.40
gb|CV053590.1|CV053590 BNEL101a1 Barley EST endosperm libra... 38 0.40
gb|CV056847.1|CV056847 BNEL21c11 Barley EST endosperm libra... 38 0.40
gb|CV057343.1|CV057343 BNEL26g2 Barley EST endosperm librar... 38 0.40
gb|CV058122.1|CV058122 BNEL34e8 Barley EST endosperm librar... 38 0.40
gb|CV058744.1|CV058744 BNEL40d3 Barley EST endosperm librar... 38 0.40
gb|CK122396.1|CK122396 BES1824103b16 BES1824 Hordeum vulgar... 38 0.40
gb|CK122412.1|CK122412 BES1824103e19 BES1824 Hordeum vulgar... 38 0.40
gb|CK123593.1|CK123593 BES1824104j03 BES1824 Hordeum vulgar... 38 0.40
gb|CK123649.1|CK123649 BES1824104n02 BES1824 Hordeum vulgar... 38 0.40
gb|CK123801.1|CK123801 BES1824105g10 BES1824 Hordeum vulgar... 38 0.40
gb|CK124021.1|CK124021 BES1824106j06 BES1824 Hordeum vulgar... 38 0.40
gb|CK124323.1|CK124323 BES1824108f22 BES1824 Hordeum vulgar... 38 0.40
gb|CK124524.1|CK124524 BES1824109h03 BES1824 Hordeum vulgar... 38 0.40
gb|CK124597.1|CK124597 BES1824109l19 BES1824 Hordeum vulgar... 38 0.40
gb|CK125833.1|CK125833 BES1824111A1b09 BES1824 Hordeum vulg... 38 0.40
gb|CK125876.1|CK125876 BES1824111A1h07 BES1824 Hordeum vulg... 38 0.40
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
Length = 261265
Score = 69.9 bits (35), Expect = 1e-010
Identities = 122/151 (80%)
Strand = Plus / Plus
Query: 331 aagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcctc 390
|||||||| ||||| ||||||||||| |||| | | |||| |||||| || | || |||
Sbjct: 206990 aagacgtcttggccggaggtggtcggcctgaccatcaaggaggccaaggagatcattctc 207049
Query: 391 aaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcggat 450
||||||||||| || ||||||||||| || |||| || ||||| | |||||||| ||
Sbjct: 207050 aaggacaagcctgaagccgacatcgtcgtcgtgccggttggctcagcggtgaccgaagac 207109
Query: 451 tatcgccctaaccgtgtccgcatcttcgtcg 481
| | || ||||||||||||||||||||||
Sbjct: 207110 ttcaggcccaaccgtgtccgcatcttcgtcg 207140
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 220663 aaccgtgtccgcatcttcgtcgaca 220639
Score = 48.1 bits (24), Expect = 4e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatc 414
|||||||||| |||||| ||||||||||||| ||| || || ||||||
Sbjct: 225062 gaggacgccaggaaggtcatcctcaaggacatgcctgaagcggacatc 225015
Score = 38.2 bits (19), Expect = 0.40
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 367 gaggacgccaagaaggtgatcctcaaggaca 397
|||||||||| | |||| |||||||||||||
Sbjct: 217686 gaggacgccagggaggtcatcctcaaggaca 217656
>gb|BM443710.1|BM443710 EBem09_SQ001_E01_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ001_E01 5', mRNA sequence
Length = 285
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatcgt 416
||||| |||||| |||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 24 gaggaggccaaggaggtcatccttaaggacatgcctgacgccgacatcgt 73
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 117 aaccgtgtccgcatcttcgtcgaca 141
>gb|BM369716.2|BM369716 EBem07_SQ004_G13_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_G13 5', mRNA sequence
Length = 419
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatcgt 416
||||| |||||| |||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 95 gaggaggccaaggaggtcatccttaaggacatgcctgacgccgacatcgt 144
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 188 aaccgtgtccgcatcttcgtcgaca 212
>gb|BM444977.2|BM444977 EBem09_SQ007_B04_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ007_B04 5', mRNA sequence
Length = 414
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatcgt 416
||||| |||||| |||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 129 gaggaggccaaggaggtcatccttaaggacatgcctgacgccgacatcgt 178
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 222 aaccgtgtccgcatcttcgtcgaca 246
>gb|BM445039.2|BM445039 EBem09_SQ007_E02_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ007_E02 5', mRNA sequence
Length = 321
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatcgt 416
||||| |||||| |||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 120 gaggaggccaaggaggtcatccttaaggacatgcctgacgccgacatcgt 169
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 213 aaccgtgtccgcatcttcgtcgaca 237
>gb|BM370828.2|BM370828 EBro04_SQ002_G18_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_G18 5', mRNA sequence
Length = 387
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatcgt 416
||||| |||||| |||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 113 gaggaggccaaggaggtcatccttaaggacatgcctgacgccgacatcgt 162
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 206 aaccgtgtccgcatcttcgtcgaca 230
>gb|BQ767410.1|BQ767410 EBro08_SQ008_G23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_G23 5', mRNA sequence
Length = 413
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 367 gaggacgccaagaaggtgatcctcaaggacaagccggacgccgacatcgt 416
||||| |||||| |||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 112 gaggaggccaaggaggtcatccttaaggacatgcctgacgccgacatcgt 161
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 205 aaccgtgtccgcatcttcgtcgaca 229
>gb|AJ228957.1|AJ228957 AJ228957 Barley leaf, 8 day old seedling Hordeum vulgare subsp.
vulgare cDNA clone HvBM099 similar to
subtilisin-chymotrypsin inhibitor, mRNA sequence
Length = 416
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 208 aaccgtgtccgcatcttcgtcgaca 232
>gb|BF627621.2|BF627621 HVSMEb0005F16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005F16f, mRNA sequence
Length = 751
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 216 aaccgtgtccgcatcttcgtcgaca 240
>gb|BF630148.2|BF630148 HVSMEb0008C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008C01f, mRNA sequence
Length = 501
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 359 aaccgtgtccgcatcttcgtcgaca 383
>gb|BF620426.2|BF620426 HVSMEc0019N04f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019N04f, mRNA sequence
Length = 682
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgccaggagaagc 60
|||||||| |||||||||||||| || |||||| ||||| | | |||||| ||||||
Sbjct: 253 agcaggccgtcctccaccggagcggccgaggccaggcggcgagagggcgccagcagaagc 194
Query: 61 agcgccagc 69
|||||||||
Sbjct: 193 agcgccagc 185
>gb|BE060713.2|BE060713 HVSMEg0013B13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013B13f, mRNA sequence
Length = 686
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgccaggagaagc 60
|||||||| |||||||||||||| || |||||| ||||| | | |||||| ||||||
Sbjct: 99 agcaggccgtcctccaccggagcggccgaggccaggcggcgagagggcgccagcagaagc 40
Query: 61 agcgccagc 69
|||||||||
Sbjct: 39 agcgccagc 31
>gb|BF629382.3|BF629382 HVSMEb0012B12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012B12f, mRNA sequence
Length = 471
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 221 aaccgtgtccgcatcttcgtcgaca 245
>gb|BF253985.3|BF253985 HVSMEf0002K21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002K21f, mRNA sequence
Length = 470
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 203 aaccgtgtccgcatcttcgtcgaca 227
>gb|BF255218.3|BF255218 HVSMEf0006E09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006E09f, mRNA sequence
Length = 448
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 204 aaccgtgtccgcatcttcgtcgaca 228
>gb|BG343239.2|BG343239 HVSMEg0005D03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005D03f, mRNA sequence
Length = 1045
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgccaggagaagc 60
|||||||| |||||||||||||| || |||||| ||||| | | |||||| ||||||
Sbjct: 195 agcaggccgtcctccaccggagcggccgaggccaggcggcgagagggcgccagcagaagc 136
Query: 61 agcgccagc 69
|||||||||
Sbjct: 135 agcgccagc 127
>gb|BM101062.1|BM101062 EBpi01_SQ002_M08_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_M08 5', mRNA sequence
Length = 309
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 80 aaccgtgtccgcatcttcgtcgaca 104
>gb|BM376417.1|BM376417 EBem05_SQ002_C18_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_C18 5', mRNA sequence
Length = 425
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 205 aaccgtgtccgcatcttcgtcgaca 229
>gb|BM376821.1|BM376821 EBem05_SQ003_F09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_F09 5', mRNA sequence
Length = 432
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 222 aaccgtgtccgcatcttcgtcgaca 246
>gb|AV926160.1|AV926160 AV926160 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18f06 5', mRNA sequence
Length = 533
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 356 aaccgtgtccgcatcttcgtcgaca 380
>gb|AV926168.1|AV926168 AV926168 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18f17 5', mRNA sequence
Length = 521
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 344 aaccgtgtccgcatcttcgtcgaca 368
>gb|AV931042.1|AV931042 AV931042 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18f06 3', mRNA sequence
Length = 502
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 159 aaccgtgtccgcatcttcgtcgaca 135
>gb|AV931049.1|AV931049 AV931049 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18f17 3', mRNA sequence
Length = 503
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 160 aaccgtgtccgcatcttcgtcgaca 136
>gb|AV932366.1|AV932366 AV932366 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3f06 5', mRNA sequence
Length = 387
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 169 aaccgtgtccgcatcttcgtcgaca 193
>gb|AV932732.1|AV932732 AV932732 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1n10 5', mRNA sequence
Length = 344
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 127 aaccgtgtccgcatcttcgtcgaca 151
>gb|AV934838.1|AV934838 AV934838 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1n10 3', mRNA sequence
Length = 327
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 161 aaccgtgtccgcatcttcgtcgaca 137
>gb|BM444210.1|BM444210 EBem09_SQ004_H19_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_H19 5', mRNA sequence
Length = 432
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 205 aaccgtgtccgcatcttcgtcgaca 229
>gb|BM444702.1|BM444702 EBem09_SQ006_D18_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ006_D18 5', mRNA sequence
Length = 270
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 81 aaccgtgtccgcatcttcgtcgaca 105
Score = 42.1 bits (21), Expect = 0.026
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 380 aggtgatcctcaaggacaagccggacgccgacatcgt 416
|||| ||||| ||||||| ||| ||||||||||||||
Sbjct: 1 aggtcatccttaaggacatgcctgacgccgacatcgt 37
>gb|AJ434164.1|AJ434164 AJ434164 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200082G06F1, mRNA sequence
Length = 449
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 180 aaccgtgtccgcatcttcgtcgaca 204
>gb|AJ461505.1|AJ461505 AJ461505 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200025D12F1, mRNA sequence
Length = 240
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 194 aaccgtgtccgcatcttcgtcgaca 218
>gb|AJ461506.1|AJ461506 AJ461506 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200026G12F2, mRNA sequence
Length = 240
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 189 aaccgtgtccgcatcttcgtcgaca 213
>gb|AJ461507.1|AJ461507 AJ461507 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200072C02F1, mRNA sequence
Length = 180
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 128 aaccgtgtccgcatcttcgtcgaca 152
>gb|BJ470410.1|BJ470410 BJ470410 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal22b17 5', mRNA sequence
Length = 344
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 132 aaccgtgtccgcatcttcgtcgaca 156
>gb|BJ472967.1|BJ472967 BJ472967 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40b03 5', mRNA sequence
Length = 402
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 185 aaccgtgtccgcatcttcgtcgaca 209
>gb|BJ474219.1|BJ474219 BJ474219 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19k07 3', mRNA sequence
Length = 366
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 182 aaccgtgtccgcatcttcgtcgaca 158
>gb|BJ474749.1|BJ474749 BJ474749 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal22b17 3', mRNA sequence
Length = 378
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 194 aaccgtgtccgcatcttcgtcgaca 170
>gb|BJ477128.1|BJ477128 BJ477128 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40b03 3', mRNA sequence
Length = 378
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 194 aaccgtgtccgcatcttcgtcgaca 170
>gb|BQ459694.1|BQ459694 HA08F12r HA Hordeum vulgare subsp. vulgare cDNA clone HA08F12
5-PRIME, mRNA sequence
Length = 575
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgccaggagaagc 60
|||||||| |||||||||||||| || |||||| ||||| | | |||||| ||||||
Sbjct: 129 agcaggccgtcctccaccggagcggccgaggccaggcggcgagagggcgccagcagaagc 70
Query: 61 agcgccagc 69
|||||||||
Sbjct: 69 agcgccagc 61
>gb|BQ464042.1|BQ464042 HF01D02T HF Hordeum vulgare subsp. vulgare cDNA clone HF01D02
5-PRIME, mRNA sequence
Length = 399
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 198 aaccgtgtccgcatcttcgtcgaca 222
>gb|BQ468022.1|BQ468022 HR01K24r HR Hordeum vulgare subsp. vulgare cDNA clone HR01K24
5-PRIME, mRNA sequence
Length = 367
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 179 aaccgtgtccgcatcttcgtcgaca 203
>gb|BQ471079.1|BQ471079 HX04O11r HX Hordeum vulgare subsp. vulgare cDNA clone HX04O11
5-PRIME, mRNA sequence
Length = 620
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgccaggagaagc 60
|||||||| |||||||||||||| || |||||| ||||| | | |||||| ||||||
Sbjct: 144 agcaggccgtcctccaccggagcggccgaggccaggcggcgagagggcgccagcagaagc 85
Query: 61 agcgccagc 69
|||||||||
Sbjct: 84 agcgccagc 76
>gb|BQ659646.1|BQ659646 HF01D02w HF Hordeum vulgare subsp. vulgare cDNA clone HF01D02
3-PRIME, mRNA sequence
Length = 372
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 208 aaccgtgtccgcatcttcgtcgaca 184
>gb|BQ662132.1|BQ662132 HR01K24u HR Hordeum vulgare subsp. vulgare cDNA clone HR01K24
3-PRIME, mRNA sequence
Length = 367
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 189 aaccgtgtccgcatcttcgtcgaca 165
>gb|BQ662161.1|BQ662161 HR01N05u HR Hordeum vulgare subsp. vulgare cDNA clone HR01N05
3-PRIME, mRNA sequence
Length = 464
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 208 aaccgtgtccgcatcttcgtcgaca 184
>gb|BM376627.2|BM376627 EBem05_SQ002_M04_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_M04 5', mRNA sequence
Length = 465
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 217 aaccgtgtccgcatcttcgtcgaca 241
>gb|BM376815.2|BM376815 EBem05_SQ003_F03_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_F03 5', mRNA sequence
Length = 436
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 222 aaccgtgtccgcatcttcgtcgaca 246
>gb|BM375954.2|BM375954 EBem06_SQ004_O08_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_O08 5', mRNA sequence
Length = 443
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 210 aaccgtgtccgcatcttcgtcgaca 234
>gb|BM445036.2|BM445036 EBem09_SQ007_D23_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ007_D23 5', mRNA sequence
Length = 411
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 205 aaccgtgtccgcatcttcgtcgaca 229
>gb|BI779601.2|BI779601 EBro01_SQ004_I17_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_I17 5', mRNA sequence
Length = 542
Score = 50.1 bits (25), Expect = 1e-004
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 335 cgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcctcaagg 394
|||||||||| ||||||||||||||| | || || |||||| || ||||||||||
Sbjct: 159 cgtcgtggccggaggtggtcgggctgccggccgatgaggccaaggccgtcatcctcaagg 218
Query: 395 acaagccggacgccgac 411
||||||| |||||||||
Sbjct: 219 acaagcctgacgccgac 235
>gb|BI777316.2|BI777316 EBro03_SQ002_N17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_N17 5', mRNA sequence
Length = 432
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 460 aaccgtgtccgcatcttcgtcgaca 484
|||||||||||||||||||||||||
Sbjct: 197 aaccgtgtccgcatcttcgtcgaca 221
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86,532
Number of Sequences: 312970
Number of extensions: 86532
Number of successful extensions: 26933
Number of sequences better than 0.5: 313
Number of HSP's better than 0.5 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26537
Number of HSP's gapped (non-prelim): 396
length of query: 747
length of database: 175,134,539
effective HSP length: 19
effective length of query: 728
effective length of database: 169,188,109
effective search space: 123168943352
effective search space used: 123168943352
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)