BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE23e10.yg.3.1
(2083 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ460052.1|BQ460052 HA07F20r HA Hordeum vulgare subsp. v... 609 e-172
gb|BQ465606.1|BQ465606 HU04C11r HU Hordeum vulgare subsp. v... 605 e-171
gb|BQ465646.1|BQ465646 HU04E11r HU Hordeum vulgare subsp. v... 603 e-170
gb|AL504463.1|AL504463 AL504463 Hordeum vulgare Barke roots... 601 e-170
gb|CA014708.1|CA014708 HT12C01r HT Hordeum vulgare subsp. v... 569 e-160
gb|BU990142.1|BU990142 HF24D10r HF Hordeum vulgare subsp. v... 561 e-158
gb|BU998296.1|BU998296 HI10J16r HI Hordeum vulgare subsp. v... 557 e-157
gb|BU988484.1|BU988484 HF17M13r HF Hordeum vulgare subsp. v... 551 e-155
gb|BJ470815.1|BJ470815 BJ470815 K. Sato unpublished cDNA li... 549 e-154
gb|BU989325.1|BU989325 HF21G23r HF Hordeum vulgare subsp. v... 547 e-154
gb|BU989692.1|BU989692 HF22G24r HF Hordeum vulgare subsp. v... 547 e-154
gb|BU994854.1|BU994854 HM08G15r HM Hordeum vulgare subsp. v... 547 e-154
gb|BU973382.1|BU973382 HB24L21r BC Hordeum vulgare subsp. v... 545 e-153
gb|BU989794.1|BU989794 HF22L13r HF Hordeum vulgare subsp. v... 545 e-153
gb|BU995820.1|BU995820 HM11H12r HM Hordeum vulgare subsp. v... 541 e-152
gb|BU995856.1|BU995856 HM11J12r HM Hordeum vulgare subsp. v... 541 e-152
gb|CA011775.1|CA011775 HT03I05r HT Hordeum vulgare subsp. v... 541 e-152
gb|AV915656.1|AV915656 AV915656 K. Sato unpublished cDNA li... 535 e-150
gb|CA007266.1|CA007266 HU07F24r HU Hordeum vulgare subsp. v... 529 e-148
gb|CB879236.1|CB879236 HP11G24T HP Hordeum vulgare subsp. v... 527 e-148
gb|CA015386.1|CA015386 HT14C12r HT Hordeum vulgare subsp. v... 523 e-147
gb|BJ469771.1|BJ469771 BJ469771 K. Sato unpublished cDNA li... 519 e-145
gb|CB882584.1|CB882584 HL02E15w HL Hordeum vulgare subsp. v... 517 e-145
gb|CA015570.1|CA015570 HT14L12r HT Hordeum vulgare subsp. v... 513 e-144
gb|AL507889.1|AL507889 AL507889 Hordeum vulgare Barke devel... 507 e-142
gb|BU987693.1|BU987693 HF15H21r HF Hordeum vulgare subsp. v... 507 e-142
gb|BF622124.1|BF622124 HVSMEa0001N04f Hordeum vulgare seedl... 505 e-141
gb|CA007590.1|CA007590 HU08G22r HU Hordeum vulgare subsp. v... 505 e-141
gb|BU990452.1|BU990452 HF25B15r HF Hordeum vulgare subsp. v... 504 e-141
gb|BQ739987.1|BQ739987 HB107G02 HB Hordeum vulgare subsp. v... 502 e-140
gb|CA008807.1|CA008807 HU12C17r HU Hordeum vulgare subsp. v... 498 e-139
gb|BU996144.1|BU996144 HM12J15r HM Hordeum vulgare subsp. v... 496 e-138
gb|CA008428.1|CA008428 HU10O23r HU Hordeum vulgare subsp. v... 482 e-134
gb|CK122769.1|CK122769 BES1824105l10 BES1824 Hordeum vulgar... 480 e-133
gb|BJ471892.1|BJ471892 BJ471892 K. Sato unpublished cDNA li... 466 e-129
gb|BF254415.2|BF254415 HVSMEf0003P04f Hordeum vulgare seedl... 464 e-129
gb|CA008984.1|CA008984 HU12M14r HU Hordeum vulgare subsp. v... 462 e-128
gb|BU999808.1|BU999808 HI15O07r HI Hordeum vulgare subsp. v... 460 e-128
gb|BU974255.1|BU974255 HB27F21r BC Hordeum vulgare subsp. v... 446 e-123
gb|CA019829.1|CA019829 HV13F24r HV Hordeum vulgare subsp. v... 446 e-123
gb|BG368549.1|BG368549 HVSMEi0019L02f Hordeum vulgare 20 DA... 436 e-120
gb|CA011796.1|CA011796 HT03J04r HT Hordeum vulgare subsp. v... 430 e-119
gb|CA017607.1|CA017607 HV05L03r HV Hordeum vulgare subsp. v... 430 e-119
gb|CV057507.1|CV057507 BNEL28f3 Barley EST endosperm librar... 430 e-119
gb|CA003862.1|CA003862 HS15N02r HS Hordeum vulgare subsp. v... 426 e-117
gb|CA008661.1|CA008661 HU11L01r HU Hordeum vulgare subsp. v... 424 e-117
gb|BQ465318.1|BQ465318 HU03E15r HU Hordeum vulgare subsp. v... 414 e-114
gb|CA001952.1|CA001952 HS06B12r HS Hordeum vulgare subsp. v... 410 e-113
gb|BG309815.2|BG309815 HVSMEc0012O05f Hordeum vulgare seedl... 408 e-112
gb|BU987736.1|BU987736 HF15J24r HF Hordeum vulgare subsp. v... 398 e-109
gb|CA001697.1|CA001697 HS05F04r HS Hordeum vulgare subsp. v... 394 e-108
gb|CA012163.1|CA012163 HT04K03r HT Hordeum vulgare subsp. v... 381 e-104
gb|BQ461126.1|BQ461126 HE01C15r HE Hordeum vulgare subsp. v... 371 e-101
gb|CB881974.1|CB881974 HM11H12w HM Hordeum vulgare subsp. v... 369 e-100
gb|CK123621.1|CK123621 BES1824104l21 BES1824 Hordeum vulgar... 367 e-099
gb|BG343631.2|BG343631 HVSMEg0006B08f Hordeum vulgare pre-a... 365 4e-099
gb|AV927392.1|AV927392 AV927392 K. Sato unpublished cDNA li... 361 6e-098
gb|BJ474057.1|BJ474057 BJ474057 K. Sato unpublished cDNA li... 361 6e-098
gb|BJ475626.1|BJ475626 BJ475626 K. Sato unpublished cDNA li... 361 6e-098
gb|CB882009.1|CB882009 HM11J12w HM Hordeum vulgare subsp. v... 355 4e-096
gb|AL508043.1|AL508043 AL508043 Hordeum vulgare Barke devel... 347 9e-094
gb|CA008164.1|CA008164 HU10B10r HU Hordeum vulgare subsp. v... 345 4e-093
gb|CA008302.1|CA008302 HU10I15r HU Hordeum vulgare subsp. v... 343 1e-092
gb|BJ476862.1|BJ476862 BJ476862 K. Sato unpublished cDNA li... 341 6e-092
gb|AL507395.1|AL507395 AL507395 Hordeum vulgare Barke devel... 337 9e-091
gb|AJ436455.1|AJ436455 AJ436455 S00002 Hordeum vulgare subs... 331 5e-089
gb|BQ663806.1|BQ663806 HU04C11u HU Hordeum vulgare subsp. v... 331 5e-089
gb|BQ663839.1|BQ663839 HU04E11u HU Hordeum vulgare subsp. v... 331 5e-089
gb|BU997006.1|BU997006 HI06J12r HI Hordeum vulgare subsp. v... 331 5e-089
gb|CB858320.1|CB858320 HI06J12w HI Hordeum vulgare subsp. v... 331 5e-089
gb|CB880978.1|CB880978 HM08G15w HM Hordeum vulgare subsp. v... 331 5e-089
gb|AJ463457.1|AJ463457 AJ463457 S00002 Hordeum vulgare subs... 325 3e-087
gb|CB859482.1|CB859482 HI10J16w HI Hordeum vulgare subsp. v... 321 5e-086
gb|AL510599.1|AL510599 AL510599 Hordeum vulgare Barke devel... 311 5e-083
gb|CA005887.1|CA005887 HU08G22u HU Hordeum vulgare subsp. v... 311 5e-083
gb|BQ663595.1|BQ663595 HU03E15u HU Hordeum vulgare subsp. v... 309 2e-082
gb|AL510491.1|AL510491 AL510491 Hordeum vulgare Barke devel... 307 8e-082
gb|CA005495.1|CA005495 HU10B10u HU Hordeum vulgare subsp. v... 301 5e-080
gb|CA008789.1|CA008789 HU12B20r HU Hordeum vulgare subsp. v... 299 2e-079
gb|BG368107.1|BG368107 HVSMEi0015L09f Hordeum vulgare 20 DA... 297 8e-079
gb|CA009979.1|CA009979 HT12C01u HT Hordeum vulgare subsp. v... 297 8e-079
gb|BG368713.2|BG368713 HVSMEi0020F07f Hordeum vulgare 20 DA... 285 3e-075
gb|BE193354.1|BE193354 HVSMEh0080L08f Hordeum vulgare 5-45 ... 283 1e-074
gb|BQ657702.1|BQ657702 HA07F20u HA Hordeum vulgare subsp. v... 276 3e-072
gb|AL511297.1|AL511297 AL511297 Hordeum vulgare Barke devel... 268 7e-070
gb|BE195639.3|BE195639 HVSMEh0090A12f Hordeum vulgare 5-45 ... 266 3e-069
gb|BM368624.2|BM368624 EBem08_SQ004_C10_R embryo, 40 DPA, n... 266 3e-069
gb|CA003832.1|CA003832 HS15L11r HS Hordeum vulgare subsp. v... 262 4e-068
gb|CV053499.1|CV053499 BNEL100a10 Barley EST endosperm libr... 260 2e-067
gb|BF258594.3|BF258594 HVSMEf0016C15f Hordeum vulgare seedl... 254 1e-065
gb|AL511147.1|AL511147 AL511147 Hordeum vulgare Barke devel... 242 4e-062
gb|BI946764.1|BI946764 HVSMEl0002D06f Hordeum vulgare spike... 242 4e-062
gb|AV920764.1|AV920764 AV920764 K. Sato unpublished cDNA li... 242 4e-062
gb|BM099480.2|BM099480 EBes01_SQ003_F23_R embryo sac, 4-6 D... 238 6e-061
gb|BQ756969.1|BQ756969 EBem10_SQ002_F19_R embryo, 2 Day ger... 238 6e-061
gb|BU997120.1|BU997120 HI06P14r HI Hordeum vulgare subsp. v... 238 6e-061
gb|CA004941.1|CA004941 HU12M14u HU Hordeum vulgare subsp. v... 238 6e-061
gb|BE421667.1|BE421667 HWM012cF.02r ITEC HWM Barley Leaf Li... 236 2e-060
gb|AJ461934.1|AJ461934 AJ461934 S00002 Hordeum vulgare subs... 236 2e-060
gb|BQ659385.1|BQ659385 HE01C15u HE Hordeum vulgare subsp. v... 236 2e-060
gb|CA005156.1|CA005156 HU11L01u HU Hordeum vulgare subsp. v... 236 2e-060
gb|CA012437.1|CA012437 HT05G22r HT Hordeum vulgare subsp. v... 236 2e-060
gb|AL500742.1|AL500742 AL500742 Hordeum vulgare Barke roots... 230 1e-058
gb|AL500331.1|AL500331 AL500331 Hordeum vulgare Barke etiol... 228 6e-058
gb|CA005431.1|CA005431 HU10I15u HU Hordeum vulgare subsp. v... 228 6e-058
gb|AJ461933.1|AJ461933 AJ461933 S00002 Hordeum vulgare subs... 224 9e-057
gb|AJ434577.1|AJ434577 AJ434577 S00002 Hordeum vulgare subs... 222 4e-056
gb|CA016702.1|CA016702 HV06N01u HV Hordeum vulgare subsp. v... 222 4e-056
gb|AV923861.1|AV923861 AV923861 K. Sato unpublished cDNA li... 218 6e-055
gb|BF616649.2|BF616649 HVSMEc0010P17f Hordeum vulgare seedl... 210 1e-052
gb|AL501785.1|AL501785 AL501785 Hordeum vulgare Barke roots... 202 3e-050
gb|AV915607.1|AV915607 AV915607 K. Sato unpublished cDNA li... 182 3e-044
gb|BQ662600.1|BQ662600 HS03D02u HS Hordeum vulgare subsp. v... 172 3e-041
gb|CA015971.1|CA015971 HV10J11u HV Hordeum vulgare subsp. v... 172 3e-041
gb|CA002889.1|CA002889 HS08N02r HS Hordeum vulgare subsp. v... 170 1e-040
gb|CA002782.1|CA002782 HS08I08r HS Hordeum vulgare subsp. v... 165 7e-039
gb|AJ463456.1|AJ463456 AJ463456 S00002 Hordeum vulgare subs... 161 1e-037
gb|BM097746.2|BM097746 EBem04_SQ002_J08_R embryo, 12 DPA, n... 157 2e-036
gb|BJ471469.1|BJ471469 BJ471469 K. Sato unpublished cDNA li... 153 3e-035
gb|BU998340.1|BU998340 HI10L22r HI Hordeum vulgare subsp. v... 143 3e-032
gb|CA005343.1|CA005343 HU10O23u HU Hordeum vulgare subsp. v... 139 4e-031
gb|BM096801.2|BM096801 EBma07_SQ001_L04_R maternal, 21 DPA,... 131 1e-028
gb|CA000412.1|CA000412 HS08I08u HS Hordeum vulgare subsp. v... 127 2e-027
gb|CA001162.1|CA001162 HS05F04u HS Hordeum vulgare subsp. v... 111 9e-023
gb|BG309731.1|BG309731 HVSMEc0012D20f Hordeum vulgare seedl... 103 2e-020
gb|CA000396.1|CA000396 HS08N02u HS Hordeum vulgare subsp. v... 100 4e-019
gb|AZ048463.1|AZ048463 PSB136 Barley PstI genomic clones Ho... 78 1e-012
gb|CA019050.1|CA019050 HV10J11r HV Hordeum vulgare subsp. v... 76 5e-012
gb|BM817077.1|BM817077 HC112F08_T3.ab1 HC Hordeum vulgare s... 58 1e-006
gb|BQ768670.1|BQ768670 EBro08_SQ012_H12_R root, 3 week, dro... 54 2e-005
gb|AV920713.1|AV920713 AV920713 K. Sato unpublished cDNA li... 44 0.018
gb|BE213844.1|BE213844 HV_CEb0001G21f Hordeum vulgare seedl... 40 0.29
>gb|BQ460052.1|BQ460052 HA07F20r HA Hordeum vulgare subsp. vulgare cDNA clone HA07F20
5-PRIME, mRNA sequence
Length = 627
Score = 609 bits (307), Expect = e-172
Identities = 538/615 (87%)
Strand = Plus / Plus
Query: 568 gaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggt 627
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 11 gaaagagtcaagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggt 70
Query: 628 gaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaag 687
||||| ||||| | ||| |||||||| |||| || |||||||| |||||| ||||||
Sbjct: 71 gaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaag 130
Query: 688 cgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaact 747
|| |||||||| || || |||||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 131 cgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaact 190
Query: 748 aaagatttctctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaat 807
||||| ||||| |||||||||||| ||||||| || ||||| |||||||| ||||||
Sbjct: 191 cgtgatttttctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaat 250
Query: 808 ccaacaatccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctgg 867
|| || |||||||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 251 ccgaccatccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctgg 310
Query: 868 ttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaagat 927
| ||||||| | | ||||| ||||| || ||||||||||| || ||||| |||||||||
Sbjct: 311 cttgaagagaaattaaagaattttgagcgtatacttgttgttatctcacattcccaagat 370
Query: 928 tttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagctcaagttatac 987
|| |||||||||||||| || ||||| ||||| ||||| ||||||| |||||| ||||
Sbjct: 371 ttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagaccctcaagctatat 430
Query: 988 accggtaactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaag 1047
|| || || || || |||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 431 actggaaattatgaccagtatgttcaaactcgctctgagcttgaagagaatcaaatgaag 490
Query: 1048 cagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttcggt 1107
|||||||||||||| ||||||||||| ||| |||||||||||||||||||| || |||
Sbjct: 491 cagtacaaatgggaacaggaacagatagctaatatgaaggagtacattgctcgatttggt 550
Query: 1108 catggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatg 1167
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 551 catggatctgcgaagcttgctcgtcaggctcagagcaaagagaagactcttgcaaagatg 610
Query: 1168 gagcgaggtggtctc 1182
||||| |||||||||
Sbjct: 611 gagcgtggtggtctc 625
>gb|BQ465606.1|BQ465606 HU04C11r HU Hordeum vulgare subsp. vulgare cDNA clone HU04C11
5-PRIME, mRNA sequence
Length = 679
Score = 605 bits (305), Expect = e-171
Identities = 569/657 (86%)
Strand = Plus / Plus
Query: 481 cctgaacacatggacatataccatctaagccatgagattgaagcttctgacatgtctgca 540
|||||||||||||||||| | ||||| | || ||||||||| |||||||||||||||||
Sbjct: 23 cctgaacacatggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcg 82
Query: 541 ctgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaatt 600
|||||||| || | ||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct: 83 ctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaaaaggaagctgaaatt 142
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||||||||||||||||||||| |||||||| ||||| | ||| |||||||| ||||
Sbjct: 143 ttggctgcacaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaa 202
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| |||||||| |||||| |||||||| |||||||| || || |||||||| ||||||
Sbjct: 203 gcgatggatgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggtttt 262
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
||||| ||||||||||||||| |||| ||||| ||||| |||||||||||| |||||
Sbjct: 263 gacaagcaaatgcaagcaaagccaactcgtgatttttctgggggttggcgtatgcggatt 322
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| || ||||| |||||||| |||||||| || |||||||||||||||||||| || |||
Sbjct: 323 gcgttggcaagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaac 382
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| ||||||||||||||||||||| | ||||||| | | ||||| ||||| || |||
Sbjct: 383 catcttgatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtata 442
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccat 960
|||||||| || ||||| ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 443 cttgttgttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatccac 502
Query: 961 atgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgc 1020
||||| ||||||| |||||| |||| || || || || || ||||||||||||||||||
Sbjct: 503 atgcagaacaagaccctcaagctatatactggaaattatgaccagtatgttcaaactcgc 562
Query: 1021 tccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttca 1080
|| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 563 tctgagcttgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagctaat 622
Query: 1081 atgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggct 1137
|||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 623 atgaaggagtacattgctcgatttggtcatggatctgcgaagcttgctcgtcaggct 679
>gb|BQ465646.1|BQ465646 HU04E11r HU Hordeum vulgare subsp. vulgare cDNA clone HU04E11
5-PRIME, mRNA sequence
Length = 678
Score = 603 bits (304), Expect = e-170
Identities = 568/656 (86%)
Strand = Plus / Plus
Query: 481 cctgaacacatggacatataccatctaagccatgagattgaagcttctgacatgtctgca 540
|||||||||||||||||| | ||||| | || ||||||||| |||||||||||||||||
Sbjct: 23 cctgaacacatggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcg 82
Query: 541 ctgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaatt 600
|||||||| || | ||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct: 83 ctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaaaaggaagctgaaatt 142
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||||||||||||||||||||| |||||||| ||||| | ||| |||||||| ||||
Sbjct: 143 ttggctgcacaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaa 202
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| |||||||| |||||| |||||||| |||||||| || || |||||||| ||||||
Sbjct: 203 gcgatggatgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggtttt 262
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
||||| ||||||||||||||| |||| ||||| ||||| |||||||||||| |||||
Sbjct: 263 gacaagcaaatgcaagcaaagccaactcgtgatttttctgggggttggcgtatgcggatt 322
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| || ||||| |||||||| |||||||| || |||||||||||||||||||| || |||
Sbjct: 323 gcgttggcaagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaac 382
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| ||||||||||||||||||||| | ||||||| | | ||||| ||||| || |||
Sbjct: 383 catcttgatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtata 442
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccat 960
|||||||| || ||||| ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 443 cttgttgttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatccac 502
Query: 961 atgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgc 1020
||||| ||||||| |||||| |||| || || || || || ||||||||||||||||||
Sbjct: 503 atgcagaacaagaccctcaagctatatactggaaattatgaccagtatgttcaaactcgc 562
Query: 1021 tccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttca 1080
|| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 563 tctgagcttgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagctaat 622
Query: 1081 atgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggc 1136
|||||||||||||||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 623 atgaaggagtacattgctcgatttggtcatggatctgcgaagcttgctcgtcaggc 678
>gb|AL504463.1|AL504463 AL504463 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05F21V 5', mRNA sequence
Length = 700
Score = 601 bits (303), Expect = e-170
Identities = 567/655 (86%)
Strand = Plus / Plus
Query: 318 ggatatccacatagagtctctttctttaacattccatgggcatgaccttattgtggattc 377
|||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||
Sbjct: 7 ggatatccacatagagtccctttcattaacatttcatggacatgaccttattgtggactc 66
Query: 378 tgatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgtggaaa 437
|| |||||||| ||||| |||||||| || |||||||| || || ||||| ||||||||
Sbjct: 67 agaattggagcttaactatgggaggcggtatggtttgctcggcttaaatggttgtggaaa 126
Query: 438 atctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatggacat 497
|||||| ||||||||||||||||||||||| ||||| || || |||||||||||||||||
Sbjct: 127 atctacccttctcacagcaataggctgcagggaactccccattcctgaacacatggacat 186
Query: 498 ataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccattgttag 557
| | ||||| | || ||||||||| ||||||||||||||||| |||||||| || | |
Sbjct: 187 acatcatctcacccgtgagattgaggcttctgacatgtctgcgctgcaagctgttatctg 246
Query: 558 ttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatga 617
|||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttgtgatgaagaaagagtcaagctggaaaaggaagctgaaattttggctgcacaggatga 306
Query: 618 tggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaac 677
|||||| |||||||| ||||| | ||| |||||||| |||| || |||||||| |||
Sbjct: 307 tggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaac 366
Query: 678 tgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagc 737
||| |||||||| |||||||| || || |||||||| ||||||||||| |||||||||||
Sbjct: 367 tgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaagc 426
Query: 738 aaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagcact 797
|||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| |||||
Sbjct: 427 aaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggcact 486
Query: 798 gtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgaggc 857
||| |||||||| || |||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 487 gttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttgaggc 546
Query: 858 ttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcaca 917
|||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || |||||
Sbjct: 547 ttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctcaca 606
Query: 918 ctcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaag 972
||||||||||| |||||||||||||| || ||||| ||||| ||||| ||||||
Sbjct: 607 ttcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaag 661
>gb|CA014708.1|CA014708 HT12C01r HT Hordeum vulgare subsp. vulgare cDNA clone HT12C01
5-PRIME, mRNA sequence
Length = 647
Score = 569 bits (287), Expect = e-160
Identities = 542/627 (86%)
Strand = Plus / Plus
Query: 327 catagagtctctttctttaacattccatgggcatgaccttattgtggattctgatttgga 386
||||||||| ||||| |||||||| ||||| ||||||||||||||||| || || |||||
Sbjct: 20 catagagtccctttcattaacatttcatggacatgaccttattgtggactcagaattgga 79
Query: 387 gctgaactacgggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactct 446
||| ||||| |||||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct: 80 gcttaactatgggaggcggtatggtttgctcggcttaaatggttgtggaaaatctaccct 139
Query: 447 tctcacagcaataggctgcagagaacttcctatccctgaacacatggacatataccatct 506
||||||||||||||||||||| ||||| || || |||||||||||||||||| | |||||
Sbjct: 140 tctcacagcaataggctgcagggaactccccattcctgaacacatggacatacatcatct 199
Query: 507 aagccatgagattgaagcttctgacatgtctgcactgcaagccattgttagttgtgacga 566
| || ||||||||| ||||||||||||||||| |||||||| || | ||||||| ||
Sbjct: 200 cacccgtgagattgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatga 259
Query: 567 agaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtgg 626
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 agaaagagtcaagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcgg 319
Query: 627 tgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaa 686
|||||| ||||| | ||| |||||||| |||| || |||||||| |||||| |||||
Sbjct: 320 tgaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaa 379
Query: 687 gcgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaac 746
||| |||||||| || || |||||||| ||||||||||| ||||||||||||||| |||
Sbjct: 380 gcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaac 439
Query: 747 taaagatttctctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaa 806
| ||||| ||||| |||||||||||| ||||||| || ||||| |||||||| |||||
Sbjct: 440 tcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaa 499
Query: 807 tccaacaatccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctg 866
||| || |||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 500 tccgaccatccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctg 559
Query: 867 gttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaaga 926
| | ||||||| | | ||||| ||||| || ||||||||||| || ||||| ||||||||
Sbjct: 560 gcttgaagagaaattaaagaattttgagcgtatacttgttgttatctcacattcccaaga 619
Query: 927 ttttctaaatggagtgtgtactaacat 953
||| |||||||||||||| || |||||
Sbjct: 620 tttcctaaatggagtgtgcaccaacat 646
>gb|BU990142.1|BU990142 HF24D10r HF Hordeum vulgare subsp. vulgare cDNA clone HF24D10
5-PRIME, mRNA sequence
Length = 650
Score = 561 bits (283), Expect = e-158
Identities = 541/627 (86%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 23 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 82
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 83 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 142
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 143 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 202
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 203 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 262
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 263 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 322
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 323 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 382
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 383 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 442
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 443 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaagagaagac 502
Query: 1155 tcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagt 1214
|||||||||||||||||| ||||||||| | ||||||||||| | |||| |||| ||
Sbjct: 503 tcttgcaaagatggagcgtggtggtctcgctgagaaggttgtcaatgacaagattcttgt 562
Query: 1215 gttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaa 1274
||| | ||||||||||| |||||||| || ||||| ||||||||||||| ||| ||||
Sbjct: 563 tttccgctttacagatgtaggcaaactcccaccaccagtgctgcagtttgctgatgtcac 622
Query: 1275 gtttgggtatacaccagataatctcat 1301
|||||||| || || |||||||||||
Sbjct: 623 atttgggtacactccggataatctcat 649
>gb|BU998296.1|BU998296 HI10J16r HI Hordeum vulgare subsp. vulgare cDNA clone HI10J16
5-PRIME, mRNA sequence
Length = 633
Score = 557 bits (281), Expect = e-157
Identities = 545/633 (86%)
Strand = Plus / Plus
Query: 460 ggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgagatt 519
|||||||| ||||| || || |||||||||||||||||| | ||||| | || |||||||
Sbjct: 1 ggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgagatt 60
Query: 520 gaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaag 579
|| ||||||||||||||||| |||||||| || | ||||||| ||||||||||| |||
Sbjct: 61 gaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtcaag 120
Query: 580 ttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattggag 639
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 121 ctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttggat 180
Query: 640 cgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgctgaa 699
| ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||||
Sbjct: 181 cttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgctgag 240
Query: 700 attttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttctct 759
|| || |||||||| ||||||||||| ||||||||||||||| |||| ||||| |||
Sbjct: 241 atattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttttct 300
Query: 760 ggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatcctt 819
|| |||||||||||| ||||||| || ||||| |||||||| |||||||| || ||||||
Sbjct: 301 gggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatcctt 360
Query: 820 ttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagaca 879
|||||||||||||| || |||||||| ||||||||||||||||||||| | ||||||| |
Sbjct: 361 ttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagagaaa 420
Query: 880 ctgaagaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatgga 939
| ||||| ||||| || ||||||||||| || ||||| ||||||||||| |||||||||
Sbjct: 421 ttaaagaattttgagcgtatacttgttgttatctcacattcccaagatttcctaaatgga 480
Query: 940 gtgtgtactaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactac 999
||||| || ||||| ||||| ||||| ||||||| |||||| |||| || || || ||
Sbjct: 481 gtgtgcaccaacatcatccacatgcagaacaagaccctcaagctatatactggaaattat 540
Query: 1000 gatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgg 1059
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 541 gaccagtatgttcaaactcgctctgagcttgaagagaatcaaatgaagcagtacaaatgg 600
Query: 1060 gagcaggaacagattgcttcaatgaaggagtac 1092
|| ||||||||||| ||| ||||||||||||
Sbjct: 601 gaacaggaacagatagctaatatgaaggagtac 633
>gb|BU988484.1|BU988484 HF17M13r HF Hordeum vulgare subsp. vulgare cDNA clone HF17M13
5-PRIME, mRNA sequence
Length = 635
Score = 551 bits (278), Expect = e-155
Identities = 512/590 (86%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 40 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 99
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 100 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 159
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
||||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 160 actgtttatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 219
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 220 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 279
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 280 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 339
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 340 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 399
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 400 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 459
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 460 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaagagaagac 519
Query: 1155 tcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagt 1214
|||||||||||||||||| ||||||||| | ||||||||||| | |||| |||| ||
Sbjct: 520 tcttgcaaagatggagcgtggtggtctcgctgagaaggttgtcaatgacaagattcttgt 579
Query: 1215 gttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttg 1264
||| | ||||||||||| |||||||| || ||||| |||||||||||||
Sbjct: 580 tttccgctttacagatgtaggcaaactcccaccaccagtgctgcagtttg 629
>gb|BJ470815.1|BJ470815 BJ470815 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26n16 5', mRNA sequence
Length = 648
Score = 549 bits (277), Expect = e-154
Identities = 550/640 (85%), Gaps = 1/640 (0%)
Strand = Plus / Plus
Query: 286 accggggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttcttta 345
||||||||||| || || || ||||| ||||| ||||||| ||||||||| ||||| |||
Sbjct: 10 accggggtcctggcttcgcatccgctctcccgtgatatcc-catagagtccctttcatta 68
Query: 346 acattccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcga 405
||||| ||||| ||||||||||||||||| || || |||||||| ||||| ||||||||
Sbjct: 69 acatttcatggacatgaccttattgtggactcagaattggagcttaactatgggaggcgg 128
Query: 406 tacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgc 465
|| |||||||| || || ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 129 tatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagcaataggctgc 188
Query: 466 agagaacttcctatccctgaacacatggacatataccatctaagccatgagattgaagct 525
|| ||||| || || |||||||||||||||||| | ||||| | || ||||||||| |||
Sbjct: 189 agggaactccccattcctgaacacatggacatacatcatctcacccgtgagattgaggct 248
Query: 526 tctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaagttggaa 585
|||||||||||||| |||||||| || | ||||||| ||||||||||| ||| |||||
Sbjct: 249 tctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaa 308
Query: 586 aaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattggagcgtgtt 645
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 309 aaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttggatcttgta 368
Query: 646 tatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgctgaaatttta 705
|||||||| |||| || |||||||| |||||| |||||||| |||||||| || ||
Sbjct: 369 tatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgctgagatattg 428
Query: 706 tttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttctctggaggt 765
|||||||| ||||||||||| ||||||||||||||| |||| ||||| ||||| |||
Sbjct: 429 tttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttttctgggggt 488
Query: 766 tggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttgctt 825
||||||||| ||||||| || ||||| |||||||| |||||||| || ||||||||||||
Sbjct: 489 tggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatccttttgctt 548
Query: 826 gatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactgaag 885
|||||||| || |||||||| ||||||||||||||||||||| | ||||||| | | |||
Sbjct: 549 gatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaaag 608
Query: 886 aaatttgaccgcatacttgttgtcatatcacactcccaag 925
|| ||||| || |||||||||| || ||||| |||||||
Sbjct: 609 aattttgagcgtatacttgttgntatctcacattcccaag 648
>gb|BU989325.1|BU989325 HF21G23r HF Hordeum vulgare subsp. vulgare cDNA clone HF21G23
5-PRIME, mRNA sequence
Length = 594
Score = 547 bits (276), Expect = e-154
Identities = 504/580 (86%)
Strand = Plus / Plus
Query: 557 gttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatg 616
||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 gttgtgatgaagaaagagtcaagctggaaaaggaagctgaaattttggctgcacaggatg 74
Query: 617 atggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaa 676
||||||| |||||||| ||||| | ||| |||||||| |||| || |||||||| ||
Sbjct: 75 atggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaa 134
Query: 677 ctgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaag 736
|||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||||
Sbjct: 135 ctgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaag 194
Query: 737 caaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagcac 796
||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||||
Sbjct: 195 caaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggcac 254
Query: 797 tgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgagg 856
|||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 255 tgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttgagg 314
Query: 857 cttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcac 916
||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||||
Sbjct: 315 cttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctcac 374
Query: 917 actcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagc 976
| ||||||||||| |||||||||||||| || ||||| ||||| ||||| ||||||| |
Sbjct: 375 attcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagaccc 434
Query: 977 tcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagaga 1036
||||| |||| || || || || || |||||||||||||||||||| || ||||||||||
Sbjct: 435 tcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaagaga 494
Query: 1037 atcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattg 1096
||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||
Sbjct: 495 atcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacattg 554
Query: 1097 ctcgcttcggtcatggttctgcaaagcttgctcgtcaggc 1136
|||| || |||||||| ||||| |||||||||||||||||
Sbjct: 555 ctcgatttggtcatggatctgcgaagcttgctcgtcaggc 594
>gb|BU989692.1|BU989692 HF22G24r HF Hordeum vulgare subsp. vulgare cDNA clone HF22G24
5-PRIME, mRNA sequence
Length = 630
Score = 547 bits (276), Expect = e-154
Identities = 525/608 (86%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 23 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 82
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 83 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 142
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 143 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 202
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 203 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 262
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 263 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 322
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 323 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 382
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 383 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 442
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 443 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaagagaagac 502
Query: 1155 tcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagt 1214
|||||||||||||||||| ||||||||| | ||||||||||| | |||| |||| ||
Sbjct: 503 tcttgcaaagatggagcgtggtggtctcgctgagaaggttgtcaatgacaagattcttgt 562
Query: 1215 gttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaa 1274
||| | ||||||||||| |||||||| || ||||| ||||||||||||| ||| ||||
Sbjct: 563 tttccgctttacagatgtaggcaaactcccaccaccagtgctgcagtttgctgatgtcac 622
Query: 1275 gtttgggt 1282
|||||||
Sbjct: 623 atttgggt 630
>gb|BU994854.1|BU994854 HM08G15r HM Hordeum vulgare subsp. vulgare cDNA clone HM08G15
5-PRIME, mRNA sequence
Length = 609
Score = 547 bits (276), Expect = e-154
Identities = 519/600 (86%)
Strand = Plus / Plus
Query: 513 tgagattgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaag 572
||||||||| ||||||||||||||||| |||||||| || | ||||||| ||||||||
Sbjct: 7 tgagattgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaag 66
Query: 573 agtgaagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagc 632
||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 67 agtcaagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagc 126
Query: 633 attggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagc 692
||||| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||
Sbjct: 127 tttggatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgc 186
Query: 693 tgctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaaga 752
|||||| || || |||||||| ||||||||||| ||||||||||||||| |||| ||
Sbjct: 187 tgctgagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtga 246
Query: 753 tttctctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaac 812
||| ||||| |||||||||||| ||||||| || ||||| |||||||| |||||||| ||
Sbjct: 247 tttttctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgac 306
Query: 813 aatccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttgga 872
|||||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||
Sbjct: 307 catccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttga 366
Query: 873 agagacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaagattttct 932
||||| | | ||||| ||||| || ||||||||||| || ||||| ||||||||||| ||
Sbjct: 367 agagaaattaaagaattttgagcgtatacttgttgttatctcacattcccaagatttcct 426
Query: 933 aaatggagtgtgtactaacattatccatatgcaaaacaagaagctcaagttatacaccgg 992
|||||||||||| || ||||| ||||| ||||| ||||||| |||||| |||| || ||
Sbjct: 427 aaatggagtgtgcaccaacatcatccacatgcagaacaagaccctcaagctatatactgg 486
Query: 993 taactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagta 1052
|| || || |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 487 aaattatgaccagtatgttcaaactcgctctgagcttgaagagaatcaaatgaagcagta 546
Query: 1053 caaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatgg 1112
||||||||| ||||||||||| ||| |||||||||||||||||||| || ||||||||
Sbjct: 547 caaatgggaacaggaacagatagctaatatgaaggagtacattgctcgatttggtcatgg 606
>gb|BU973382.1|BU973382 HB24L21r BC Hordeum vulgare subsp. vulgare cDNA clone HB24L21
5-PRIME, mRNA sequence
Length = 636
Score = 545 bits (275), Expect = e-153
Identities = 518/599 (86%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 32 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 91
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 92 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 151
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 152 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 211
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 212 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 271
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 272 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 331
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 332 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 391
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 392 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 451
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 452 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaagagaagac 511
Query: 1155 tcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagt 1214
|||||||||||||||||| ||||||||| | ||||||||||| | |||| |||| ||
Sbjct: 512 tcttgcaaagatggagcgtggtggtctcgctgagaaggttgtcaatgacaagattcttgt 571
Query: 1215 gttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtca 1273
||| | ||||||||||| |||||||| || ||||| ||||||||||||| ||| ||||
Sbjct: 572 tttccgctttacagatgtaggcaaactcccaccaccagtgctgcagtttgctgatgtca 630
>gb|BU989794.1|BU989794 HF22L13r HF Hordeum vulgare subsp. vulgare cDNA clone HF22L13
5-PRIME, mRNA sequence
Length = 628
Score = 545 bits (275), Expect = e-153
Identities = 518/599 (86%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 23 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 82
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 83 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 142
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 143 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 202
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 203 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 262
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 263 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 322
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 323 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 382
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 383 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 442
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 443 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaagagaagac 502
Query: 1155 tcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagt 1214
|||||||||||||||||| ||||||||| | ||||||||||| | |||| |||| ||
Sbjct: 503 tcttgcaaagatggagcgtggtggtctcgctgagaaggttgtcaatgacaagattcttgt 562
Query: 1215 gttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtca 1273
||| | ||||||||||| |||||||| || ||||| ||||||||||||| ||| ||||
Sbjct: 563 tttccgctttacagatgtaggcaaactcccaccaccagtgctgcagtttgctgatgtca 621
>gb|BU995820.1|BU995820 HM11H12r HM Hordeum vulgare subsp. vulgare cDNA clone HM11H12
5-PRIME, mRNA sequence
Length = 640
Score = 541 bits (273), Expect = e-152
Identities = 525/609 (86%)
Strand = Plus / Plus
Query: 489 catggacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagc 548
|||||||||| | ||||| | || ||||||||| ||||||||||||||||| ||||||||
Sbjct: 32 catggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcgctgcaagc 91
Query: 549 cattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgc 608
|| | ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 92 tgttatctgttgtgatgaagaaagagtcaagctggaaaaggaagctgaaattttggctgc 151
Query: 609 acaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatgga 668
||||||||||||||| |||||||| ||||| | ||| |||||||| |||| || |||||
Sbjct: 152 acaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatgga 211
Query: 669 tgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaaca 728
||| |||||| |||||||| |||||||| || || |||||||| ||||||||||| ||
Sbjct: 212 tgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagca 271
Query: 729 aatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagc 788
||||||||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||
Sbjct: 272 aatgcaagcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggc 331
Query: 789 aagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctaga 848
||| |||||||| |||||||| || |||||||||||||||||||| || |||||||| ||
Sbjct: 332 aagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttga 391
Query: 849 tcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgt 908
||||||||||||||||||| | ||||||| | | ||||| ||||| || |||||||||||
Sbjct: 392 tcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgt 451
Query: 909 catatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaa 968
|| ||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| ||
Sbjct: 452 tatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaa 511
Query: 969 caagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatct 1028
||||| |||||| |||| || || || || || |||||||||||||||||||| || ||
Sbjct: 512 caagaccctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagct 571
Query: 1029 tgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaagga 1088
||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 572 tgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaagga 631
Query: 1089 gtacattgc 1097
|||||||||
Sbjct: 632 gtacattgc 640
>gb|BU995856.1|BU995856 HM11J12r HM Hordeum vulgare subsp. vulgare cDNA clone HM11J12
5-PRIME, mRNA sequence
Length = 640
Score = 541 bits (273), Expect = e-152
Identities = 525/609 (86%)
Strand = Plus / Plus
Query: 488 acatggacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaag 547
||||||||||| | ||||| | || ||||||||| ||||||||||||||||| |||||||
Sbjct: 32 acatggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcgctgcaag 91
Query: 548 ccattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctg 607
| || | ||||||| ||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 92 ctgttatctgttgtgatgaagaaagagtcaagctggaaaaggaagctgaaattttggctg 151
Query: 608 cacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatgg 667
|||||||||||||||| |||||||| ||||| | ||| |||||||| |||| || ||||
Sbjct: 152 cacaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatgg 211
Query: 668 atgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaac 727
|||| |||||| |||||||| |||||||| || || |||||||| ||||||||||| |
Sbjct: 212 atgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagc 271
Query: 728 aaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttag 787
|||||||||||||| |||| ||||| ||||| |||||||||||| ||||||| || |
Sbjct: 272 aaatgcaagcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttgg 331
Query: 788 caagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctag 847
|||| |||||||| |||||||| || |||||||||||||||||||| || |||||||| |
Sbjct: 332 caagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttg 391
Query: 848 atcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttg 907
|||||||||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||
Sbjct: 392 atcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttg 451
Query: 908 tcatatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaa 967
| || ||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |
Sbjct: 452 ttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcaga 511
Query: 968 acaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatc 1027
|||||| |||||| |||| || || || || || |||||||||||||||||||| || |
Sbjct: 512 acaagaccctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagc 571
Query: 1028 ttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaagg 1087
|||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||
Sbjct: 572 ttgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaagg 631
Query: 1088 agtacattg 1096
|||||||||
Sbjct: 632 agtacattg 640
>gb|CA011775.1|CA011775 HT03I05r HT Hordeum vulgare subsp. vulgare cDNA clone HT03I05
5-PRIME, mRNA sequence
Length = 640
Score = 541 bits (273), Expect = e-152
Identities = 539/625 (86%), Gaps = 2/625 (0%)
Strand = Plus / Plus
Query: 307 ccgctttcccgggatatccacatagagtctctttctttaacattccatgggcatgacctt 366
||||| ||||| ||||||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 13 ccgctctcccgtgatatccacatagagtccctttcattaacatttcatggacatgacctt 72
Query: 367 attgtggattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaat 426
|||||||| || || |||||||| ||||| |||||||| || |||||||| || || |||
Sbjct: 73 attgtggactcagaattggagcttaactatgggaggcggtatggtttgctcggcttaaat 132
Query: 427 ggctgtggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaa 486
|| |||||||||||||| ||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 133 ggttgtggaaaatctacccttctcacagcaataggctgcagggaactccccattcctgaa 192
Query: 487 cacatggacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaa 546
|||||||||||| | ||||| | || ||||||||| ||||||||||||||||| ||||||
Sbjct: 193 cacatggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcgctgcaa 252
Query: 547 gccattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggct 606
|| || | ||||||| ||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 253 gctgttatctgttgtgatgaagaaagagtcaagctggaaaaggaagctgaaattttggct 312
Query: 607 gcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatg 666
||||||||||||||||| |||||||| ||||| | ||| |||||||| |||| || |||
Sbjct: 313 gcacaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatg 372
Query: 667 gatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaa 726
||||| |||||| |||||||| |||||||| || || |||||||| |||||||||||
Sbjct: 373 gatgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaag 432
Query: 727 caaatgcaagcaaagaaaactaaagatttct-ctggaggttggcgtatgaggattgcttt 785
||||||||||||||| |||| ||||| | |||| |||||||||||| ||||||| ||
Sbjct: 433 caaatgcaagcaaagccaactcgtgatttttnctgggggttggcgtatgcggattgcgtt 492
Query: 786 agcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatct 845
||||| |||||||| |||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 493 ggcaagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatct 552
Query: 846 agatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata-cttg 904
||||||||||||||||||||| | ||||||| | | ||||| ||||| || ||| ||||
Sbjct: 553 tgatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtataccttg 612
Query: 905 ttgtcatatcacactcccaagattt 929
|||| || ||||| |||||||||||
Sbjct: 613 ttgttatctcacattcccaagattt 637
>gb|AV915656.1|AV915656 AV915656 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15i02 5', mRNA sequence
Length = 620
Score = 535 bits (270), Expect = e-150
Identities = 522/605 (86%), Gaps = 1/605 (0%)
Strand = Plus / Plus
Query: 706 tttggtctgggttttgacaa-acaaatgcaagcaaagaaaactaaagatttctctggagg 764
|||||||| ||||||||||| ||||||||||||||| |||| ||||| ||||| ||
Sbjct: 14 tttggtctaggttttgacaagncaaatgcaagcaaagccaactcgtgatttttctggggg 73
Query: 765 ttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttgct 824
|||||||||| ||||||| || ||||| |||||||| |||||||| || |||||||||||
Sbjct: 74 ttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatccttttgct 133
Query: 825 tgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactgaa 884
||||||||| || |||||||| ||||||||||||||||||||| | ||||||| | | ||
Sbjct: 134 tgatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaaa 193
Query: 885 gaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtgtg 944
||| ||||| || ||||||||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 194 gaattttgagcgtatacttgttgttatctcacattcccaagatttcctaaatggagtgtg 253
Query: 945 tactaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatca 1004
|| ||||| ||||| ||||| ||||||| |||||| |||| || || || || || ||
Sbjct: 254 caccaacatcatccacatgcagaacaagaccctcaagctatatactggaaattatgacca 313
Query: 1005 gtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagca 1064
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 314 gtatgttcaaactcgctctgagcttgaagagaatcaaatgaagcagtacaaatgggaaca 373
Query: 1065 ggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagct 1124
||||||||| ||| |||||||||||||||||||| || |||||||| ||||| |||||
Sbjct: 374 ggaacagatagctaatatgaaggagtacattgctcgatttggtcatggatctgcgaagct 433
Query: 1125 tgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcac 1184
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
Sbjct: 434 tgctcgtcaggctcagagcaaagagaagactcttgcaaagatggagcgtggtggtctcgc 493
Query: 1185 cgagaaggttgttagggacagagttctagtgttcaggtttacagatgttggcaaacttcc 1244
||||||||||| | |||| |||| || ||| | ||||||||||| |||||||| ||
Sbjct: 494 tgagaaggttgtcaatgacaagattcttgttttccgctttacagatgtaggcaaactccc 553
Query: 1245 tccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatata 1304
||||| ||||||||||||| ||| |||| |||||||| || || ||||||||||| ||
Sbjct: 554 accaccagtgctgcagtttgctgatgtcacatttgggtacactccggataatctcatcta 613
Query: 1305 caaga 1309
|||||
Sbjct: 614 caaga 618
>gb|CA007266.1|CA007266 HU07F24r HU Hordeum vulgare subsp. vulgare cDNA clone HU07F24
5-PRIME, mRNA sequence
Length = 610
Score = 529 bits (267), Expect = e-148
Identities = 510/590 (86%), Gaps = 1/590 (0%)
Strand = Plus / Plus
Query: 289 ggggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaaca 348
|||||||| || || || ||||| ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 1 ggggtcctggcttcgcatccgctctcccgtgatatccacatagagtccctttcattaaca 60
Query: 349 ttccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatac 408
|| ||||| ||||||||||||||||| || || |||||||| ||||| |||||||| ||
Sbjct: 61 tttcatggacatgaccttattgtggactcagaattggagcttaactatgggaggcggtat 120
Query: 409 ggtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcaga 468
|||||||| || || ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 121 ggtttgctcggcttaaatggttgtggaaaatctacccttctcacagcaataggctgcagg 180
Query: 469 gaacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttct 528
||||| || || |||||||||||||||||| | ||||| | || ||||||||| ||||||
Sbjct: 181 gaactccccattcctgaacacatggacatacatcatctcacccgtgagattgaggcttct 240
Query: 529 gacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaag 588
||||||||||| |||||||| || | ||||||| ||||||||||| ||| ||||||||
Sbjct: 241 gacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaaaag 300
Query: 589 gaagctgaaattttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttat 648
||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||| |||
Sbjct: 301 gaagctgaaattttggctgcacaggatgatggtggcggtgaagctttggatcttgtatat 360
Query: 649 gagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgctgaaattttattt 708
||||| |||| || |||||||| |||||| |||||||| |||||||| || || |||
Sbjct: 361 gagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgctgagatattgttt 420
Query: 709 ggtctgggttttgacaaacaaatgcaagcaaagaaaactaaaga-tttctctggaggttg 767
||||| ||||||||||| ||||||||||||||| |||| || ||| ||||| |||||
Sbjct: 421 ggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgattttntctgggggttg 480
Query: 768 gcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttgcttga 827
||||||| ||||||| || ||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 481 gcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatccttttgcttga 540
Query: 828 tgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagaga 877
|||||| || |||||||| ||||||||||||||||||||| | |||||||
Sbjct: 541 tgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagaga 590
>gb|CB879236.1|CB879236 HP11G24T HP Hordeum vulgare subsp. vulgare cDNA clone HP11G24
5-PRIME, mRNA sequence
Length = 580
Score = 527 bits (266), Expect = e-148
Identities = 494/570 (86%)
Strand = Plus / Plus
Query: 307 ccgctttcccgggatatccacatagagtctctttctttaacattccatgggcatgacctt 366
||||| ||||| ||||||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 11 ccgctctcccgtgatatccacatagagtccctttcattaacatttcatggacatgacctt 70
Query: 367 attgtggattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaat 426
|||||||| || || |||||||| ||||| |||||||| || |||||||| || || |||
Sbjct: 71 attgtggactcagaattggagcttaactatgggaggcggtatggtttgctcggcttaaat 130
Query: 427 ggctgtggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaa 486
|| |||||||||||||| ||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 131 ggttgtggaaaatctacccttctcacagcaataggctgcagggaactccccattcctgaa 190
Query: 487 cacatggacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaa 546
|||||||||||| | ||||| | || ||||||||| ||||||||||||||||| ||||||
Sbjct: 191 cacatggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcgctgcaa 250
Query: 547 gccattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggct 606
|| || | ||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 251 gctgttatctgttgtgatgaagaaagagtcaatctggaaaaggaagctgaaattttggct 310
Query: 607 gcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatg 666
||||||||||||||||| |||||||| ||||| | ||| |||||||| |||| || |||
Sbjct: 311 gcacaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatg 370
Query: 667 gatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaa 726
||||| |||||| |||||||| |||||||| || || |||||||| |||||||||||
Sbjct: 371 gatgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaag 430
Query: 727 caaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgcttta 786
||||||||||||||| |||| ||||| ||||| |||||||||||| ||||||| ||
Sbjct: 431 caaatgcaagcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttg 490
Query: 787 gcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatcta 846
||||| |||||||| |||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 491 gcaagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatctt 550
Query: 847 gatcttgaggcttgtgtctggttggaagag 876
||||||||||||||||||||| | ||||||
Sbjct: 551 gatcttgaggcttgtgtctggcttgaagag 580
>gb|CA015386.1|CA015386 HT14C12r HT Hordeum vulgare subsp. vulgare cDNA clone HT14C12
5-PRIME, mRNA sequence
Length = 642
Score = 523 bits (264), Expect = e-147
Identities = 512/592 (86%), Gaps = 2/592 (0%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| |||||| ||||||||||||||||
Sbjct: 45 cggacatgtaccggggtcctggcttcgcatccgctctcccgg-atatccacatagagtcc 103
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 104 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 163
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 164 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 223
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 224 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 283
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 284 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 343
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 344 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 403
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 404 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 463
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
|| || || |||||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct: 464 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttt 523
Query: 757 t-ctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaat 815
| |||| |||||||||||| ||||||| || ||||| |||||||| |||||||| || ||
Sbjct: 524 tnctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccat 583
Query: 816 ccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctgg 867
|||||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 584 ccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctgg 635
>gb|BJ469771.1|BJ469771 BJ469771 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37h15 5', mRNA sequence
Length = 639
Score = 519 bits (262), Expect = e-145
Identities = 535/626 (85%)
Strand = Plus / Plus
Query: 847 gatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgtt 906
||||||||||||||||||||| | ||||||| | | ||||| ||||| || |||||||||
Sbjct: 5 gatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgtt 64
Query: 907 gtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaa 966
|| || ||||| ||||||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct: 65 gttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcag 124
Query: 967 aacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgat 1026
||||||| |||||| |||| || || || || || |||||||||||||||||||| ||
Sbjct: 125 aacaagaccctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgag 184
Query: 1027 cttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaag 1086
||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 185 cttgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaag 244
Query: 1087 gagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaa 1146
|||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 245 gagtacattgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaa 304
Query: 1147 gagaaaactcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacaga 1206
||||| |||||||||||||||||||| ||||||||| | ||||||||||| | ||||
Sbjct: 305 gagaagactcttgcaaagatggagcgtggtggtctcgctgagaaggttgtcaatgacaag 364
Query: 1207 gttctagtgttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgtt 1266
|||| || ||| | ||||||||||| |||||||| || ||||| ||||||||||||| |
Sbjct: 365 attcttgttttccgctttacagatgtaggcaaactcccaccaccagtgctgcagtttgct 424
Query: 1267 gaagtcaagtttgggtatacaccagataatctcatatacaagagtcttgactttggagtt 1326
|| |||| |||||||| || || ||||||||||| ||||||| || |||||||| |||
Sbjct: 425 gatgtcacatttgggtacactccggataatctcatctacaagaacctcgactttggtgtt 484
Query: 1327 gatcttgactctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctg 1386
|| |||||||| ||| | ||| |||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 485 gaccttgactcaagagttgcactggtcggtccgaatggggcaggtaagagcacacttctg 544
Query: 1387 aagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctg 1446
||||| ||||| |||||||| ||||| | ||||||||||| | |||||||| |||||
Sbjct: 545 aagctcatgacaggtgacctatctccactggatggcatggtcagacgccacaaccaccta 604
Query: 1447 cgcattgcacagtaccatcagcatct 1472
||||||||||| | |||||| |||||
Sbjct: 605 cgcattgcacaattccatcaacatct 630
>gb|CB882584.1|CB882584 HL02E15w HL Hordeum vulgare subsp. vulgare cDNA clone HL02E15
3-PRIME, mRNA sequence
Length = 588
Score = 517 bits (261), Expect = e-145
Identities = 501/581 (86%)
Strand = Plus / Plus
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 4 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 63
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 64 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 123
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 124 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 183
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 184 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 243
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 244 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 303
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 304 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 363
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
|| || || |||||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct: 364 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttt 423
Query: 757 tctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatc 816
||||| |||||||||||| ||||||| || ||||| |||||||| |||||||| || |||
Sbjct: 424 tctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatc 483
Query: 817 cttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagag 876
||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||||||
Sbjct: 484 cttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagag 543
Query: 877 acactgaagaaatttgaccgcatacttgttgtcatatcaca 917
| | | ||||| ||||| || ||||||||||| || |||||
Sbjct: 544 aaattaaagaattttgagcgtatacttgttgttatctcaca 584
>gb|CA015570.1|CA015570 HT14L12r HT Hordeum vulgare subsp. vulgare cDNA clone HT14L12
5-PRIME, mRNA sequence
Length = 627
Score = 513 bits (259), Expect = e-144
Identities = 503/583 (86%), Gaps = 1/583 (0%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 45 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 104
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 105 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 164
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 165 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 224
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 225 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 284
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 285 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 344
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 345 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 404
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 405 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 464
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
|| || || |||||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct: 465 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttt 524
Query: 757 tc-tggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaat 815
|| ||| |||||||||||| ||||||| || ||||| |||||||| |||||||| || ||
Sbjct: 525 tcntgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccat 584
Query: 816 ccttttgcttgatgagcccacaaaccatctagatcttgaggct 858
|||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 585 ccttttgcttgatgagccaaccaaccatcttgatcttgaggct 627
>gb|AL507889.1|AL507889 AL507889 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07C12V 5',
mRNA sequence
Length = 700
Score = 507 bits (256), Expect = e-142
Identities = 563/664 (84%), Gaps = 1/664 (0%)
Strand = Plus / Plus
Query: 1003 cagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggag 1062
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 37 cagtatgttcaaactcgctctgagcttgaagagaatcaaatgaagcagtacaaatgggaa 96
Query: 1063 caggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaag 1122
||||||||||| ||| |||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 97 caggaacagatagctaatatgaaggagtacattgctcgatttggtcatggatctgcgaag 156
Query: 1123 cttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctc 1182
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 157 cttgctcgtcaggctcagagcaaagagaagactcttgcaaagatggagcgtggtggtctc 216
Query: 1183 accgagaaggttgttagggacagagttctagtgttcaggtttacagatgttggcaaactt 1242
| ||||||||||| | |||| |||| || ||| | ||||||||||| ||||||||
Sbjct: 217 gctgagaaggttgtcaatgacaagattcttgttttccgctttacagatgtaggcaaactc 276
Query: 1243 cctccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcata 1302
|| ||||| ||||||||||||| ||| |||| |||||||| || || |||||||||||
Sbjct: 277 ccaccaccagtgctgcagtttgctgatgtcacatttgggtacactccggataatctcatc 336
Query: 1303 tacaagagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaat 1362
||||||| || |||||||| ||||| |||||||| ||| | ||| |||| ||||| |||
Sbjct: 337 tacaagaacctcgactttggtgttgaccttgactcaagagttgcactggtcggtccgaat 396
Query: 1363 ggtgcagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggc 1422
|| ||||| |||||||| ||||||||||| ||||| |||||||| ||||| | ||||||
Sbjct: 397 ggggcaggtaagagcacacttctgaagctcatgacaggtgacctatctccactggatggc 456
Query: 1423 atggttcggcgccacaatcacctgcgcattgcacagtaccatcagcatcttgcggacaag 1482
||||| | |||||||| ||||| ||||||||||| | |||||| ||||| | || |||
Sbjct: 457 atggtcagacgccacaaccacctacgcattgcacaattccatcaacatctcactgagaag 516
Query: 1483 ctggatctggacatgccggctctggcttacatgatgaaggaataccctgggaccgaagaa 1542
||||| |||||||||||||| ||| |||||||||| ||| |||||||||| |||||
Sbjct: 517 ctggacctggacatgccggccctgcagtacatgatgagggagtaccctgggaatgaagag 576
Query: 1543 gagaagatgcgagctgctgttggcaggtttggcctatcaggaaaggcgcaggt-gatgcc 1601
||||||||| ||||||| | |||| ||||||||| ||||||||||| ||||| ||||||
Sbjct: 577 gagaagatgagagctgcaatcggcaagtttggcctgtcaggaaaggcacaggtggatgcc 636
Query: 1602 aatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttggcatatag 1661
|||| || || ||||||||||| | | ||||||||| ||||| ||| | |||| |||
Sbjct: 637 tatgaaaaacctgtctgatgggcagaaggcccgtgtcatttttgcttggctagcatttag 696
Query: 1662 gcag 1665
||||
Sbjct: 697 gcag 700
>gb|BU987693.1|BU987693 HF15H21r HF Hordeum vulgare subsp. vulgare cDNA clone HF15H21
5-PRIME, mRNA sequence
Length = 529
Score = 507 bits (256), Expect = e-142
Identities = 445/508 (87%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 20 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 79
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 80 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 139
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 140 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 199
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 200 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 259
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 260 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 319
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 320 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 379
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 380 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 439
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 440 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagcaaagagaagac 499
Query: 1155 tcttgcaaagatggagcgaggtggtctc 1182
|||||||||||||||||| |||||||||
Sbjct: 500 tcttgcaaagatggagcgtggtggtctc 527
>gb|BF622124.1|BF622124 HVSMEa0001N04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001N04f, mRNA sequence
Length = 714
Score = 505 bits (255), Expect = e-141
Identities = 507/591 (85%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 15 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 74
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 75 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 134
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 135 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 194
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 195 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 254
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 255 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 314
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 315 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 374
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| ||||| || || | || |||||||| |||||| |||||||| ||||||
Sbjct: 375 gatcttgtatatgaccggttaaaagcgatggatgcatcaactgctgaaaagcgtgctgct 434
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
|| || || ||||| || ||||||||||| ||||||||||||||| |||| ||||||
Sbjct: 435 gagatattgtttgggctaggttttgacaagcaaatgcaagcaaagccaactcgagatttt 494
Query: 757 tctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatc 816
||||| |||||||||||| |||| || || ||||| |||||||| |||||||| || |||
Sbjct: 495 tctgggggttggcgtatgcggatggcgttggcaagggcactgttcatgaatccgaccatc 554
Query: 817 cttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctgg 867
||||||||||||||||| | | |||||| |||||||||||||||||||||
Sbjct: 555 cttttgcttgatgagccacccacccatcttgatcttgaggcttgtgtctgg 605
>gb|CA007590.1|CA007590 HU08G22r HU Hordeum vulgare subsp. vulgare cDNA clone HU08G22
5-PRIME, mRNA sequence
Length = 577
Score = 505 bits (255), Expect = e-141
Identities = 489/567 (86%)
Strand = Plus / Plus
Query: 767 ggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttgcttg 826
|||||||| ||||||| || ||||| |||||||| |||||||| || |||||||||||||
Sbjct: 11 ggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatccttttgcttg 70
Query: 827 atgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactgaaga 886
||||||| || |||||||| ||||||||||||||||||||| | ||||||| | | ||||
Sbjct: 71 atgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaaaga 130
Query: 887 aatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtgtgta 946
| ||||| || ||||||||||| || ||||| ||||||||||| |||||||||||||| |
Sbjct: 131 attttgagcgtatacttgttgttatctcacattcccaagatttcctaaatggagtgtgca 190
Query: 947 ctaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatcagt 1006
| ||||| ||||| ||||| ||||||| |||||| |||| || || || || || ||||
Sbjct: 191 ccaacatcatccacatgcagaacaagaccctcaagctatatactggaaattatgaccagt 250
Query: 1007 atgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcagg 1066
|||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 251 atgttcaaactcgctctgagcttgaagagaatcaaatgaagcagtacaaatgggaacagg 310
Query: 1067 aacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttg 1126
||||||| ||| |||||||||||||||||||| || |||||||| ||||| |||||||
Sbjct: 311 aacagatagctaatatgaaggagtacattgctcgatttggtcatggatctgcgaagcttg 370
Query: 1127 ctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccg 1186
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| | |
Sbjct: 371 ctcgtcaggctcagagcaaagagaagactcttgcaaagatggagcgtggtggtctcgctg 430
Query: 1187 agaaggttgttagggacagagttctagtgttcaggtttacagatgttggcaaacttcctc 1246
|||||||||| | |||| |||| || ||| | ||||||||||| |||||||| || |
Sbjct: 431 agaaggttgtcaatgacaagattcttgttttccgctttacagatgtaggcaaactcccac 490
Query: 1247 cacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatataca 1306
|||| ||||||||||||| ||| |||| |||||||| || || ||||||||||| ||||
Sbjct: 491 caccagtgctgcagtttgctgatgtcacatttgggtacactccggataatctcatctaca 550
Query: 1307 agagtcttgactttggagttgatcttg 1333
||| || |||||||| ||||| ||||
Sbjct: 551 agaacctcgactttggtgttgaccttg 577
>gb|BU990452.1|BU990452 HF25B15r HF Hordeum vulgare subsp. vulgare cDNA clone HF25B15
5-PRIME, mRNA sequence
Length = 602
Score = 504 bits (254), Expect = e-141
Identities = 506/590 (85%)
Strand = Plus / Plus
Query: 838 aaccatctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgc 897
|||||||| ||||||||||||||||||||| | ||||||| | | ||||| ||||| ||
Sbjct: 12 aaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgt 71
Query: 898 atacttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatc 957
||||||||||| || ||||| ||||||||||| |||||||||||||| || ||||| |||
Sbjct: 72 atacttgttgttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatc 131
Query: 958 catatgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaact 1017
|| ||||| ||||||| |||||| |||| || || || || || |||||||||||||||
Sbjct: 132 cacatgcagaacaagaccctcaagctatatactggaaattatgaccagtatgttcaaact 191
Query: 1018 cgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgct 1077
||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 192 cgctctgagcttgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagct 251
Query: 1078 tcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggct 1137
|||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 252 aatatgaaggagtacattgctcgatttggtcatggatctgcgaagcttgctcgtcaggct 311
Query: 1138 cagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccgagaaggttgtt 1197
|||||||||||||| |||||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 312 cagagcaaagagaagactcttgcaaagatggagcgtggtggtctcgctgagaaggttgtc 371
Query: 1198 agggacagagttctagtgttcaggtttacagatgttggcaaacttcctccacctgtgctg 1257
| |||| |||| || ||| | ||||||||||| |||||||| || ||||| ||||||
Sbjct: 372 aatgacaagattcttgttttccgctttacagatgtaggcaaactcccaccaccagtgctg 431
Query: 1258 cagtttgttgaagtcaagtttgggtatacaccagataatctcatatacaagagtcttgac 1317
||||||| ||| |||| |||||||| || || ||||||||||| ||||||| || |||
Sbjct: 432 cagtttgctgatgtcacatttgggtacactccggataatctcatctacaagaacctcgac 491
Query: 1318 tttggagttgatcttgactctagaatcgcattggttggtcccaatggtgcagggaagagc 1377
||||| ||||| |||||||| ||| | ||| |||| ||||| ||||| ||||| ||||||
Sbjct: 492 tttggtgttgaccttgactcaagagttgcactggtcggtccgaatggggcaggtaagagc 551
Query: 1378 actcttctgaagcttatgactggtgaccttgctccattagatggcatggt 1427
|| ||||||||||| ||||| |||||||| ||||| | |||||||||||
Sbjct: 552 acacttctgaagctcatgacaggtgacctatctccactggatggcatggt 601
>gb|BQ739987.1|BQ739987 HB107G02 HB Hordeum vulgare subsp. vulgare cDNA clone HB107G02
similar to ABC transporter homolog [Populus nigra], mRNA
sequence
Length = 648
Score = 502 bits (253), Expect = e-140
Identities = 444/508 (87%)
Strand = Plus / Plus
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct: 25 aactgctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgca 84
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 85 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 144
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||||| ||||||||
Sbjct: 145 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttga 204
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 205 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 264
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 265 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 324
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 325 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 384
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 385 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctnatatgaaggagtacat 444
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaac 1154
|||||| || |||||||| ||||| |||||||||||||||||||||||| ||||||| ||
Sbjct: 445 tgctcgatttggtcatggatctgcgaagcttgctcgtcaggctcagagccaagagaagac 504
Query: 1155 tcttgcaaagatggagcgaggtggtctc 1182
|||||||||||||||||| |||||||||
Sbjct: 505 tcttgcaaagatggagcgtggtggtctc 532
>gb|CA008807.1|CA008807 HU12C17r HU Hordeum vulgare subsp. vulgare cDNA clone HU12C17
5-PRIME, mRNA sequence
Length = 546
Score = 498 bits (251), Expect = e-139
Identities = 461/531 (86%)
Strand = Plus / Plus
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 13 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 72
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 73 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 132
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 133 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 192
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 193 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 252
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 253 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 312
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 313 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 372
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
|| || || |||||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct: 373 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttt 432
Query: 757 tctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatc 816
||||| |||||||||||| ||||||| || ||||| |||||||| |||||||| || |||
Sbjct: 433 tctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatc 492
Query: 817 cttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctgg 867
||||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 493 cttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctgg 543
>gb|BU996144.1|BU996144 HM12J15r HM Hordeum vulgare subsp. vulgare cDNA clone HM12J15
5-PRIME, mRNA sequence
Length = 565
Score = 496 bits (250), Expect = e-138
Identities = 483/561 (86%)
Strand = Plus / Plus
Query: 513 tgagattgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaag 572
||||||||| ||||||||||||||||| |||||||| || | ||||||| ||||||||
Sbjct: 5 tgagattgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaag 64
Query: 573 agtgaagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagc 632
||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 65 agtcaagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagc 124
Query: 633 attggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagc 692
||||| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||
Sbjct: 125 tttggatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgc 184
Query: 693 tgctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaaga 752
|||||| || || |||||||| ||||||||||| ||||||||||||||| |||| ||
Sbjct: 185 tgctgagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtga 244
Query: 753 tttctctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaac 812
||| ||||| |||||||||||| ||||||| || ||||| |||||||| |||||||| ||
Sbjct: 245 tttttctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgac 304
Query: 813 aatccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttgga 872
|||||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||
Sbjct: 305 catccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttga 364
Query: 873 agagacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaagattttct 932
||||| | | ||||| ||||| || ||||||||||| || ||||| ||||||||||| ||
Sbjct: 365 agagaaattaaagaattttgagcgtatacttgttgttatctcacattcccaagatttcct 424
Query: 933 aaatggagtgtgtactaacattatccatatgcaaaacaagaagctcaagttatacaccgg 992
|||||||||||| || ||||| ||||| ||||| ||||||| |||||| |||| || ||
Sbjct: 425 aaatggagtgtgcaccaacatcatccacatgcagaacaagaccctcaagctatatactgg 484
Query: 993 taactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagta 1052
|| || || |||||||||||||||||||| || || |||||||||||||||||||||
Sbjct: 485 aaattatgaccagtatgttcaaactcgctctgagctntgagagaatcaaatgaagcagta 544
Query: 1053 caaatgggagcaggaacagat 1073
||||||||| |||||||||||
Sbjct: 545 caaatgggaacaggaacagat 565
>gb|CA008428.1|CA008428 HU10O23r HU Hordeum vulgare subsp. vulgare cDNA clone HU10O23
5-PRIME, mRNA sequence
Length = 591
Score = 482 bits (243), Expect = e-134
Identities = 477/554 (86%), Gaps = 1/554 (0%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 38 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 97
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 98 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 157
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 158 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 217
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 218 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 277
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 278 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 337
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 338 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 397
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 398 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 457
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
|| || || |||||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct: 458 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttt 517
Query: 757 tctgga-ggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaat 815
||||| |||||||||||| ||||||| || ||||| |||||||| |||||||| || ||
Sbjct: 518 tctggngggttggcgtatgcggattgcgttggcaagggcactgttcatgaatccgaccat 577
Query: 816 ccttttgcttgatg 829
||||||||||||||
Sbjct: 578 ccttttgcttgatg 591
>gb|CK122769.1|CK122769 BES1824105l10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L105 5-PRIME, mRNA sequence
Length = 751
Score = 480 bits (242), Expect = e-133
Identities = 501/584 (85%), Gaps = 3/584 (0%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 169 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 228
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 229 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 288
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 289 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 348
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 349 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 408
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 409 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 468
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 469 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 528
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 529 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 588
Query: 697 gaaattttattt-ggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagattt 755
|| || || ||| ||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct: 589 gagatattgtttnggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgattt 648
Query: 756 ctctggaggttggcgtatg-aggattgctttagcaagagcactgtttatgaatccaacaa 814
||||| |||||||||||| ||||||| || ||||| |||||||| |||||||| || |
Sbjct: 649 ttctgggggttggcgtatgcgggattgcgttggcaagggcactgttcatgaatccgacca 708
Query: 815 tccttttgcttgatgagcccacaaaccatctagatcttgaggct 858
||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 709 tccttttgcttgatgag-ccancnaccatcttgatcttgaggct 751
Score = 83.8 bits (42), Expect = 2e-014
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 116 ccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcggctgcca 175
|||||||||| ||||| ||||||||||| ||||| |||||||||||||| || || ||||
Sbjct: 11 ccatggtgtccgatgctagcaagaagaaagccgcgcagaagaaggccgccgccgccgcca 70
Query: 176 agaggggaggcaag 189
||||||||| ||||
Sbjct: 71 agaggggagccaag 84
>gb|BJ471892.1|BJ471892 BJ471892 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal28f09 5', mRNA sequence
Length = 544
Score = 466 bits (235), Expect = e-129
Identities = 451/523 (86%)
Strand = Plus / Plus
Query: 286 accggggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttcttta 345
||||||||||| || || || ||||| ||||| ||||||||||||||||| ||||| |||
Sbjct: 22 accggggtcctggcttcgcatccgctctcccgtgatatccacatagagtccctttcatta 81
Query: 346 acattccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcga 405
||||| ||||| ||||||||||||||||| || || |||||||| ||||| ||||||||
Sbjct: 82 acatttcatggacatgaccttattgtggactcagaattggagcttaactatgggaggcgg 141
Query: 406 tacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgc 465
|| |||||||| || || ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 142 tatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagcaataggctgc 201
Query: 466 agagaacttcctatccctgaacacatggacatataccatctaagccatgagattgaagct 525
|| ||||| || || |||||||||||||||||| | ||||| | || ||||||||| |||
Sbjct: 202 agggaactccccattcctgaacacatggacatacatcatctcacccgtgagattgaggct 261
Query: 526 tctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaagttggaa 585
|||||||||||||| |||||||| || | ||||||| ||||||||||| ||| |||||
Sbjct: 262 tctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaa 321
Query: 586 aaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattggagcgtgtt 645
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 322 aaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttggatcttgta 381
Query: 646 tatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgctgaaatttta 705
|||||||| |||| || |||||||| |||||| |||||||| |||||||| || ||
Sbjct: 382 tatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgctgagatattg 441
Query: 706 tttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttctctggaggt 765
|||||||| ||||||||||| ||||||||||||||| |||| ||||| ||||| |||
Sbjct: 442 tttggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttttctgggggt 501
Query: 766 tggcgtatgaggattgctttagcaagagcactgtttatgaatc 808
||||||||| ||||||| || ||||| |||||||| |||||||
Sbjct: 502 tggcgtatgcggattgcgttggcaagggcactgttcatgaatc 544
>gb|BF254415.2|BF254415 HVSMEf0003P04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0003P04f, mRNA sequence
Length = 561
Score = 464 bits (234), Expect = e-129
Identities = 475/556 (85%)
Strand = Plus / Plus
Query: 824 ttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactga 883
|||||||||| || |||||||| ||||||||||||||||||||| | ||||||| | | |
Sbjct: 1 ttgatgagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaa 60
Query: 884 agaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtgt 943
|||| ||||| || ||||||||||| || ||||| ||||||||||| |||||||||||||
Sbjct: 61 agaattttgagcgtatacttgttgttatctcacattcccaagatttcctaaatggagtgt 120
Query: 944 gtactaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatc 1003
| || ||||| ||||| ||||| ||||||| |||||| |||| || || || || || |
Sbjct: 121 gcaccaacatcatccacatgcagaacaagaccctcaagctatatactggaaattatgacc 180
Query: 1004 agtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagc 1063
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 181 agtatgttcaaactcgctctgagcttgaagagaatcaaatgaagcagtacaaatgggaac 240
Query: 1064 aggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagc 1123
|||||||||| ||| |||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 241 aggaacagatagctaatatgaaggagtacattgctcgatttggtcatggatctgcgaagc 300
Query: 1124 ttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctca 1183
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 301 ttgctcgtcaggctcagagcaaagagaagactcttgcaaagatggagcgtggtggtctcg 360
Query: 1184 ccgagaaggttgttagggacagagttctagtgttcaggtttacagatgttggcaaacttc 1243
| ||||||||||| | |||| |||| || ||| | ||||||||||| |||||||| |
Sbjct: 361 ctgagaaggttgtcaatgacaagattcttgttttccgctttacagatgtaggcaaactcc 420
Query: 1244 ctccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatat 1303
| ||||| ||||||||||||| ||| |||| |||||||| || || ||||||||||| |
Sbjct: 421 caccaccagtgctgcagtttgctgatgtcacatttgggtacactccggataatctcatct 480
Query: 1304 acaagagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatg 1363
|||||| || |||| ||| ||||| |||||||| ||| | ||| |||| ||||| ||||
Sbjct: 481 acaagaacctcgactntggtgttgaccttgactcaagagttgcactggtcggtccgaatg 540
Query: 1364 gtgcagggaagagcac 1379
| ||| | ||||||||
Sbjct: 541 gggcangtaagagcac 556
>gb|CA008984.1|CA008984 HU12M14r HU Hordeum vulgare subsp. vulgare cDNA clone HU12M14
5-PRIME, mRNA sequence
Length = 527
Score = 462 bits (233), Expect = e-128
Identities = 446/517 (86%)
Strand = Plus / Plus
Query: 448 ctcacagcaataggctgcagagaacttcctatccctgaacacatggacatataccatcta 507
|||||||||||||||||||| ||||| || || |||||||||||||||||| | |||||
Sbjct: 11 ctcacagcaataggctgcagggaactccccattcctgaacacatggacatacatcatctc 70
Query: 508 agccatgagattgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaa 567
| || ||||||||| ||||||||||||||||| |||||||| || | ||||||| |||
Sbjct: 71 acccgtgagattgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaa 130
Query: 568 gaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggt 627
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 131 gaaagagtcaagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggt 190
Query: 628 gaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaag 687
||||| ||||| | ||| |||||||| |||| || |||||||| |||||| ||||||
Sbjct: 191 gaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaag 250
Query: 688 cgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaact 747
|| |||||||| || || |||||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 251 cgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaagcaaagccaact 310
Query: 748 aaagatttctctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaat 807
||||| ||||| |||||||||||| ||||||| || ||||| |||||||| ||||||
Sbjct: 311 cgtgatttttctgggggttggcgtatgcggattgcgttggcaagggcactgttcatgaat 370
Query: 808 ccaacaatccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctgg 867
|| || |||||||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 371 ccgaccatccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtctgg 430
Query: 868 ttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaagat 927
| ||||||| | | ||||| ||||| || ||||||||||| || ||||| |||||||||
Sbjct: 431 cttgaagagaaattaaagaattttgagcgtatacttgttgttatctcacattcccaagat 490
Query: 928 tttctaaatggagtgtgtactaacattatccatatgc 964
|| |||||||||||||| || ||||| ||||| ||||
Sbjct: 491 ttcctaaatggagtgtgcaccaacatcatccacatgc 527
>gb|BU999808.1|BU999808 HI15O07r HI Hordeum vulgare subsp. vulgare cDNA clone HI15O07
5-PRIME, mRNA sequence
Length = 609
Score = 460 bits (232), Expect = e-128
Identities = 514/607 (84%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1017 tcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgc 1076
|||||| || |||||||||||| |||||||||||||||||||||| ||||||||||| ||
Sbjct: 4 tcgctctgagcttgaagagaat-aaatgaagcagtacaaatgggaacaggaacagatagc 62
Query: 1077 ttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggc 1136
| |||||||||||||||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 63 taatatgaaggagtacattgctcgatttggtcatggatctgcgaagcttgctcgtcaggc 122
Query: 1137 tcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccgagaaggttgt 1196
||||||||||||||| |||||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 123 tcagagcaaagagaagactcttgcaaagatggagcgtggtggtctcgctgagaaggttgt 182
Query: 1197 tagggacagagttctagtgttcaggtttacagatgttggcaaacttcctccacctgtgct 1256
| |||| |||| || ||| | ||||||||||| |||||||| || ||||| |||||
Sbjct: 183 caatgacaagattcttgttttccgctttacagatgtaggcaaactcccaccaccagtgct 242
Query: 1257 gcagtttgttgaagtcaagtttgggtatacaccagataatctcatatacaagagtcttga 1316
|||||||| ||| |||| |||||||| || || ||||||||||| ||||||| || ||
Sbjct: 243 gcagtttgctgatgtcacatttgggtacactccggataatctcatctacaagaacctcga 302
Query: 1317 ctttggagttgatcttgactctagaatcgcattggttggtcccaatggtgcagggaagag 1376
|||||| ||||| |||||||| ||| | ||| |||| ||||| ||||| ||||| |||||
Sbjct: 303 ctttggtgttgaccttgactcaagagttgcactggtcggtccgaatggggcaggtaagag 362
Query: 1377 cactcttctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgcca 1436
||| ||||||||||| ||||| |||||||| ||||| | ||||||||||| | |||||
Sbjct: 363 cacacttctgaagctcatgacaggtgacctatctccactggatggcatggtcagacgcca 422
Query: 1437 caatcacctgcgcattgcacagtaccatcagcatcttgcggacaagctggatctggacat 1496
||| ||||| ||||||||||| | |||||| ||||| | || |||||||| ||||||||
Sbjct: 423 caaccacctacgcattgcacaattccatcaacatctcactgagaagctggacctggacat 482
Query: 1497 gccggctctggcttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagc 1556
|||||| ||| |||||||||| ||| ||||||| || ||||| ||||||||| ||||
Sbjct: 483 gccggccctgcagtacatgatgagggagtaccctgngaatgaagaggagaagatgagagc 542
Query: 1557 tgctgttggcaggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttc 1616
||| | |||| ||||||||| ||||||||||| ||||||||||| |||| || || ||
Sbjct: 543 tgcaatcggcaagtttggcctgtcaggaaaggcacaggtgatgcctatgaaaaacctgtc 602
Query: 1617 tgatggg 1623
|||||||
Sbjct: 603 tgatggg 609
>gb|BU974255.1|BU974255 HB27F21r BC Hordeum vulgare subsp. vulgare cDNA clone HB27F21
5-PRIME, mRNA sequence
Length = 522
Score = 446 bits (225), Expect = e-123
Identities = 441/513 (85%)
Strand = Plus / Plus
Query: 625 ggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaa 684
|||||||| ||||| | ||| |||||||| |||| || |||||||| |||||| |||
Sbjct: 10 ggtgaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaa 69
Query: 685 aagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaa 744
||||| |||||||| || || |||||||| ||||||||||| ||||||||||||||| |
Sbjct: 70 aagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaagcaaagcca 129
Query: 745 actaaagatttctctggaggttggcgtatgaggattgctttagcaagagcactgtttatg 804
||| ||||| ||||| |||||||||||| ||||||| || ||||| |||||||| |||
Sbjct: 130 actcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggcactgttcatg 189
Query: 805 aatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtc 864
||||| || |||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 190 aatccgaccatccttttgcttgatgagccaaccaaccatcttgatcttgaggcttgtgtc 249
Query: 865 tggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaa 924
||| | ||||||| | | ||||| ||||| || ||||||||||| || ||||| ||||||
Sbjct: 250 tggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctcacattcccaa 309
Query: 925 gattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagctcaagtta 984
||||| |||||||||||||| || ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 310 gatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagaccctcaagcta 369
Query: 985 tacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatg 1044
|| || || || || || |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 370 tatactggaaattatgaccagtatgttcaaactcgctctgagcttgaagagaatcaaatg 429
Query: 1045 aagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttc 1104
||||||||||||||||| ||||||||||| ||| |||||||||||||||||||| ||
Sbjct: 430 aagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacattgctcgattt 489
Query: 1105 ggtcatggttctgcaaagcttgctcgtcaggct 1137
|||||||| ||||| ||||||||||||||||||
Sbjct: 490 ggtcatggatctgcgaagcttgctcgtcaggct 522
>gb|CA019829.1|CA019829 HV13F24r HV Hordeum vulgare subsp. vulgare cDNA clone HV13F24
5-PRIME, mRNA sequence
Length = 506
Score = 446 bits (225), Expect = e-123
Identities = 429/497 (86%)
Strand = Plus / Plus
Query: 409 ggtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcaga 468
|||||||| || || ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 10 ggtttgctcggcttaaatggttgtggaaaatctacccttctcacagcaataggctgcagg 69
Query: 469 gaacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttct 528
||||| || || |||||||||||||||||| | ||||| | || ||||||||| ||||||
Sbjct: 70 gaactccccattcctgaacacatggacatacatcatctcacccgtgagattgaggcttct 129
Query: 529 gacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaag 588
||||||||||| |||||||| || | ||||||| ||||||||||| ||| ||||||||
Sbjct: 130 gacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaaaag 189
Query: 589 gaagctgaaattttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttat 648
||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||| |||
Sbjct: 190 gaagctgaaattttggctgcacaggatgatggtggcggtgaagctttggatcttgtatat 249
Query: 649 gagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgctgaaattttattt 708
||||| |||| || |||||||| |||||| |||||||| |||||||| || || |||
Sbjct: 250 gagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgctgagatattgttt 309
Query: 709 ggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttgg 768
||||| ||||||||||| ||||||||||||||| |||| ||||| ||||| ||||||
Sbjct: 310 ggtctaggttttgacaagcaaatgcaagcaaagccaactcgtgatttttctgggggttgg 369
Query: 769 cgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttgcttgat 828
|||||| ||||||| || ||||| |||||||| |||||||| || |||||||||||||||
Sbjct: 370 cgtatgcggattgcgttggcaagggcactgttcatgaatccgaccatccttttgcttgat 429
Query: 829 gagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactgaagaaa 888
||||| || |||||||| ||||||||||||||||||||| | ||||||| | | |||||
Sbjct: 430 gagccaaccaaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaaagaat 489
Query: 889 tttgaccgcatacttgt 905
||||| || ||||||||
Sbjct: 490 tttgagcgtatacttgt 506
>gb|BG368549.1|BG368549 HVSMEi0019L02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019L02f, mRNA sequence
Length = 602
Score = 436 bits (220), Expect = e-120
Identities = 483/568 (85%), Gaps = 2/568 (0%)
Strand = Plus / Plus
Query: 615 tgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctgg 674
||||||||| |||||||| ||||| | ||| |||||||| || | || ||||||||
Sbjct: 1 tgatggtggcggtgaagctttggatcttgtatatgagcggttaaaagcgatggatgcatc 60
Query: 675 aactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgca 734
|||||| |||||||| |||||||| || || |||||||| |||| ||| | ||||||||
Sbjct: 61 aactgctgaaaagcgtgctgctgagatattgtttggtctaagttt-gaccagcaaatgca 119
Query: 735 agcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagc 794
||||||| |||| ||||| ||||| |||||||||||| ||||||| || ||||| ||
Sbjct: 120 agcaaagccaactcgtgatttttctgggggttggcgtatgcggattgcgttggcaagggc 179
Query: 795 actgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttga 854
|||||| |||||||| || |||||||||||||||||||| || |||||| | ||||||||
Sbjct: 180 actgttcatgaatccgaccatccttttgcttgatgagccaaccaaccattttgatcttga 239
Query: 855 ggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatc 914
||||||||||||| | ||||||| | | ||||| ||||| || ||||||||||| || ||
Sbjct: 240 ggcttgtgtctggcttgaagagaaattaaagaattttgagcgtatacttgttgttatctc 299
Query: 915 acactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaa 974
||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 300 acattcccaagatttcctaaatggagtgtgcaccaacatcatccacatgcagaacaagac 359
Query: 975 gctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaaga 1034
|||||| |||| || || || || || |||||||||||||||||||| || ||||||||
Sbjct: 360 cctcaagctatatactggaaattatgaccagtatgttcaaactcgctctgagcttgaaga 419
Query: 1035 gaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacat 1094
||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 420 gaatcaaatgaagcagtacaaatgggaacaggaacagatagctaatatgaaggagtacat 479
Query: 1095 tgctcgcttcggtcatggttctgcaaagcttgc-tcgtcaggctcagagcaaagagaaaa 1153
|||||| || |||||||| ||||| | ||||| ||||||||||||||||||| |||| |
Sbjct: 480 tgctcgatttggtcatggatctgccgaacttgcttcgtcaggctcagagcaaaaagaaga 539
Query: 1154 ctcttgcaaagatggagcgaggtggtct 1181
|||||||||||||||| || ||||||||
Sbjct: 540 ctcttgcaaagatggaacgtggtggtct 567
>gb|CA011796.1|CA011796 HT03J04r HT Hordeum vulgare subsp. vulgare cDNA clone HT03J04
5-PRIME, mRNA sequence
Length = 510
Score = 430 bits (217), Expect = e-119
Identities = 403/465 (86%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 31 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 90
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 91 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 150
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 151 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 210
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 211 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 270
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 271 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 330
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 331 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 390
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 391 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 450
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaag 741
|| || || |||||||| ||||||||||| |||||||||||||||
Sbjct: 451 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaag 495
>gb|CA017607.1|CA017607 HV05L03r HV Hordeum vulgare subsp. vulgare cDNA clone HV05L03
5-PRIME, mRNA sequence
Length = 500
Score = 430 bits (217), Expect = e-119
Identities = 403/465 (86%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 36 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 95
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 96 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 155
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 156 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 215
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 216 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 275
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 276 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 335
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 336 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 395
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 396 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 455
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaag 741
|| || || |||||||| ||||||||||| |||||||||||||||
Sbjct: 456 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaag 500
>gb|CV057507.1|CV057507 BNEL28f3 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL28f3 5' similar to putative iron inhibited
ABC transporter 2, mRNA sequence
Length = 620
Score = 430 bits (217), Expect = e-119
Identities = 517/617 (83%)
Strand = Plus / Plus
Query: 1108 catggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatg 1167
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 catggatctgcgaagcttgctcgtcaggctcagagcaaagagaagactcttgcaaagatg 60
Query: 1168 gagcgaggtggtctcaccgagaaggttgttagggacagagttctagtgttcaggtttaca 1227
||||| ||||||||| | ||||||||||| | |||| |||| || ||| | ||||||
Sbjct: 61 gagcgtggtggtctcgctgagaaggttgtcaatgacaagattcttgttttccgctttaca 120
Query: 1228 gatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaagtttgggtataca 1287
||||| |||||||| || ||||| ||||||||||||| ||| |||| |||||||| ||
Sbjct: 121 gatgtaggcaaactcccaccaccagtgctgcagtttgctgatgtcacatttgggtacact 180
Query: 1288 ccagataatctcatatacaagagtcttgactttggagttgatcttgactctagaatcgca 1347
|| ||||||||||| ||||||| || |||||||| ||||| |||||||| ||| | |||
Sbjct: 181 ccggataatctcatctacaagaacctcgactttggtgttgaccttgactcaagagttgca 240
Query: 1348 ttggttggtcccaatggtgcagggaagagcactcttctgaagcttatgactggtgacctt 1407
|||| ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||||||||
Sbjct: 241 ctggtcggtccgaatggggcaggtaagagcacacttctgaagctcatgacaggtgaccta 300
Query: 1408 gctccattagatggcatggttcggcgccacaatcacctgcgcattgcacagtaccatcag 1467
||||| | ||||||||||| | |||||||| ||||| ||||||||||| | ||||||
Sbjct: 301 tctccactggatggcatggtcagacgccacaaccacctacgcattgcacaattccatcaa 360
Query: 1468 catcttgcggacaagctggatctggacatgccggctctggcttacatgatgaaggaatac 1527
||||| | || |||||||| |||||||||||||| ||| |||||||||| ||| |||
Sbjct: 361 catctcactgagaagctggacctggacatgccggccctgcagtacatgatgagggagtac 420
Query: 1528 cctgggaccgaagaagagaagatgcgagctgctgttggcaggtttggcctatcaggaaag 1587
||||||| ||||| ||||||||| ||||||| | |||| ||||||||| |||||||||
Sbjct: 421 cctgggaatgaagaggagaagatgagagctgcaatcggcaagtttggcctgtcaggaaag 480
Query: 1588 gcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgca 1647
|| ||||||||||| |||| || || ||||||||||| | | ||||||||| |||||
Sbjct: 481 gcacaggtgatgcctatgaaaaacctgtctgatgggcagaaggcccgtgtcatttttgct 540
Query: 1648 tggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggac 1707
||| | |||| ||||||||| || |||| |||| |||||||||||||||||| | |||
Sbjct: 541 tggctagcatttaggcagccacagatgctgttgcttgatgagccgacaaatcatcttgac 600
Query: 1708 attgagaccattgactc 1724
||||||||||| |||||
Sbjct: 601 attgagaccatcgactc 617
>gb|CA003862.1|CA003862 HS15N02r HS Hordeum vulgare subsp. vulgare cDNA clone HS15N02
5-PRIME, mRNA sequence
Length = 494
Score = 426 bits (215), Expect = e-117
Identities = 413/479 (86%)
Strand = Plus / Plus
Query: 481 cctgaacacatggacatataccatctaagccatgagattgaagcttctgacatgtctgca 540
|||||||||||||||||| | ||||| | || ||||||||| |||||||||||||||||
Sbjct: 12 cctgaacacatggacatacatcatctcacccgtgagattgaggcttctgacatgtctgcg 71
Query: 541 ctgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaatt 600
|||||||| || | ||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct: 72 ctgcaagctgttatctgttgtgatgaagaaagagtcaagctggaaaaggaagctgaaatt 131
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||||||||||||||||||||| |||||||| ||||| | ||| |||||||| ||||
Sbjct: 132 ttggctgcacaggatgatggtggcggtgaagctttggatcttgtatatgagcggttagaa 191
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| |||||||| |||||| |||||||| |||||||| || || |||||||| ||||||
Sbjct: 192 gcgatggatgcatcaactgctgaaaagcgtgctgctgagatattgtttggtctaggtttt 251
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
||||| ||||||||||||||| |||| ||||| ||||| |||||||||||| |||||
Sbjct: 252 gacaagcaaatgcaagcaaagccaactcgtgatttttctgggggttggcgtatgcggatt 311
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| || ||||| |||||||| |||||||| || |||||||||||||||||||| || |||
Sbjct: 312 gcgttggcaagggcactgttcatgaatccgaccatccttttgcttgatgagccaaccaac 371
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| ||||||||||||||||||||| | ||||||| | | ||||| ||||| || |||
Sbjct: 372 catcttgatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgtata 431
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatcca 959
|||||||| || ||||| ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 432 cttgttgttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatcca 490
>gb|CA008661.1|CA008661 HU11L01r HU Hordeum vulgare subsp. vulgare cDNA clone HU11L01
5-PRIME, mRNA sequence
Length = 485
Score = 424 bits (214), Expect = e-117
Identities = 402/465 (86%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct: 11 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatatccacatagagtcc 70
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 71 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 130
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| || |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 131 gggaggcggtatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 190
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 191 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 250
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 251 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 310
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 311 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 370
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 371 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 430
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaag 741
|| || || |||||||| |||| |||||| |||||||||||||||
Sbjct: 431 gagatattgtttggtctaggttntgacaagcaaatgcaagcaaag 475
>gb|BQ465318.1|BQ465318 HU03E15r HU Hordeum vulgare subsp. vulgare cDNA clone HU03E15
5-PRIME, mRNA sequence
Length = 621
Score = 414 bits (209), Expect = e-114
Identities = 401/465 (86%)
Strand = Plus / Plus
Query: 277 cggacctgcaccggggtcctcgcgtctcacccgctttcccgggatatccacatagagtct 336
||||| || ||||||||||| || || || ||||| ||||| ||||| |||||||||||
Sbjct: 151 cggacatgtaccggggtcctggcttcgcatccgctctcccgtgatattcacatagagtcc 210
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
||||| |||||||| ||||| ||||||||||||||||| || || |||||||| |||||
Sbjct: 211 ctttcattaacatttcatggacatgaccttattgtggactcagaattggagcttaactat 270
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|||||||| | |||||||| || || ||||| |||||||||||||| ||||||||||||
Sbjct: 271 gggaggcggcatggtttgctcggcttaaatggttgtggaaaatctacccttctcacagca 330
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||| ||||| || || |||||||||||||||||| | ||||| | || ||||
Sbjct: 331 ataggctgcagggaactccccattcctgaacacatggacatacatcatctcacccgtgag 390
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||| ||||||||||||||||| |||||||| || | ||||||| |||||||||||
Sbjct: 391 attgaggcttctgacatgtctgcgctgcaagctgttatctgttgtgatgaagaaagagtc 450
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 451 aagctggaaaaggaagctgaaattttggctgcacaggatgatggtggcggtgaagctttg 510
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| | ||| |||||||| |||| || |||||||| |||||| |||||||| ||||||
Sbjct: 511 gatcttgtatatgagcggttagaagcgatggatgcatcaactgctgaaaagcgtgctgct 570
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaag 741
|| || || |||||||| ||||||||||| |||||||||||||||
Sbjct: 571 gagatattgtttggtctaggttttgacaagcaaatgcaagcaaag 615
Score = 63.9 bits (32), Expect = 2e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 134 gcaagaagaaggccgcccagaagaaggccgctgcggctgccaagaggggaggcaag 189
|||||||||| ||||| |||||||||||||| || || ||||||||||||| ||||
Sbjct: 11 gcaagaagaaagccgcgcagaagaaggccgccgccgccgccaagaggggagccaag 66
>gb|CA001952.1|CA001952 HS06B12r HS Hordeum vulgare subsp. vulgare cDNA clone HS06B12
5-PRIME, mRNA sequence
Length = 453
Score = 410 bits (207), Expect = e-113
Identities = 369/423 (87%)
Strand = Plus / Plus
Query: 319 gatatccacatagagtctctttctttaacattccatgggcatgaccttattgtggattct 378
||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||
Sbjct: 15 gatatccacatagagtccctttcattaacatttcatggacatgaccttattgtggactca 74
Query: 379 gatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgtggaaaa 438
|| |||||||| ||||| |||||||| || |||||||| || || ||||| |||||||||
Sbjct: 75 gaattggagcttaactatgggaggcggtatggtttgctcggcttaaatggttgtggaaaa 134
Query: 439 tctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatggacata 498
||||| ||||||||||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct: 135 tctacccttctcacagcaataggctgcagggaactccccattcctgaacacatggacata 194
Query: 499 taccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccattgttagt 558
| ||||| | || ||||||||| ||||||||||||||||| |||||||| || | ||
Sbjct: 195 catcatctcacccgtgagattgaggcttctgacatgtctgcgctgcaagctgttatctgt 254
Query: 559 tgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatgat 618
||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtgatgaagaaagagtcaagctggaaaaggaagctgaaattttggctgcacaggatgat 314
Query: 619 ggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaact 678
||||| |||||||| ||||| | ||| |||||||| |||| || |||||||| ||||
Sbjct: 315 ggtggcggtgaagctttggatcttgtatatgagcggttagaagcgatggatgcatcaact 374
Query: 679 gcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagca 738
|| |||||||| |||||||| || || |||||||| ||||||||||| ||||||||||||
Sbjct: 375 gctgaaaagcgtgctgctgagatattgtttggtctaggttttgacaagcaaatgcaagca 434
Query: 739 aag 741
|||
Sbjct: 435 aag 437
>gb|BG309815.2|BG309815 HVSMEc0012O05f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0012O05f, mRNA sequence
Length = 883
Score = 408 bits (206), Expect = e-112
Identities = 386/446 (86%)
Strand = Plus / Plus
Query: 838 aaccatctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgc 897
|||||||| ||||||||||||||||||||| | ||||||| | | ||||| ||||| ||
Sbjct: 5 aaccatcttgatcttgaggcttgtgtctggcttgaagagaaattaaagaattttgagcgt 64
Query: 898 atacttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatc 957
||||||||||| || ||||| ||||||||||| |||||||||||||| || ||||| |||
Sbjct: 65 atacttgttgttatctcacattcccaagatttcctaaatggagtgtgcaccaacatcatc 124
Query: 958 catatgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaact 1017
|| ||||| ||||||| |||||| |||| || || || || || |||||||||||||||
Sbjct: 125 cacatgcagaacaagaccctcaagctatatactggaaattatgaccagtatgttcaaact 184
Query: 1018 cgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgct 1077
||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 185 cgctctgagcttgaagagaatcaaatgaagcagtacaaatgggaacaggaacagatagct 244
Query: 1078 tcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggct 1137
|||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 245 aatatgaaggagtacattgctcgatttggtcatggatctgcgaagcttgctcgtcaggct 304
Query: 1138 cagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccgagaaggttgtt 1197
|||||||||||||| |||||||||||||||||||| ||||||||| | ||||||| |||
Sbjct: 305 cagagcaaagagaagactcttgcaaagatggagcgtggtggtctcgctgagaagggtgtc 364
Query: 1198 agggacagagttctagtgttcaggtttacagatgttggcaaacttcctccacctgtgctg 1257
| |||| |||| || ||| ||||||||||||| |||||||| || ||||| ||||||
Sbjct: 365 aatgacaagattcttgttttccggtttacagatgtaggcaaactcccaccaccagtgctg 424
Query: 1258 cagtttgttgaagtcaagtttgggta 1283
|||| || ||| ||||| ||||||||
Sbjct: 425 cagtgtgctgatgtcaaatttgggta 450
>gb|BU987736.1|BU987736 HF15J24r HF Hordeum vulgare subsp. vulgare cDNA clone HF15J24
5-PRIME, mRNA sequence
Length = 683
Score = 398 bits (201), Expect = e-109
Identities = 438/517 (84%)
Strand = Plus / Plus
Query: 1366 gcagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatg 1425
||||| |||||||| ||||||||||| ||||| |||||||| ||||| | |||||||||
Sbjct: 12 gcaggtaagagcacacttctgaagctcatgacaggtgacctatctccactggatggcatg 71
Query: 1426 gttcggcgccacaatcacctgcgcattgcacagtaccatcagcatcttgcggacaagctg 1485
|| | |||||||| ||||| ||||||||||| | |||||| ||||| | || ||||||
Sbjct: 72 gtcagacgccacaaccacctacgcattgcacaattccatcaacatctcactgagaagctg 131
Query: 1486 gatctggacatgccggctctggcttacatgatgaaggaataccctgggaccgaagaagag 1545
|| |||||||||||||| ||| |||||||||| ||| |||||||||| ||||| |||
Sbjct: 132 gacctggacatgccggccctgcagtacatgatgagggagtaccctgggaatgaagaggag 191
Query: 1546 aagatgcgagctgctgttggcaggtttggcctatcaggaaaggcgcaggtgatgccaatg 1605
|||||| ||||||| | |||| ||||||||| ||||||||||| ||||||||||| |||
Sbjct: 192 aagatgagagctgcaatcggcaagtttggcctgtcaggaaaggcacaggtgatgcctatg 251
Query: 1606 aggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttggcatataggcag 1665
| || || ||||||||||| | | ||||||||| ||||| ||| | |||| |||||||
Sbjct: 252 aaaaacctgtctgatgggcagaaggcccgtgtcatttttgcttggctagcatttaggcag 311
Query: 1666 ccgcaactgctactgctcgatgagccgacaaatcatttggacattgagaccattgactcc 1725
|| || |||| |||| |||||||||||||||||| | |||||||||||||| |||||
Sbjct: 312 ccacagatgctgttgcttgatgagccgacaaatcatcttgacattgagaccatcgactca 371
Query: 1726 ctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagccatgatttcagg 1785
|| || ||||||||||| || ||||| || || |||||| ||||||||||||| ||||||
Sbjct: 372 cttgctgaggcactgaaggaatgggacggggggttggtcctggtgagccatgacttcagg 431
Query: 1786 ctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcaggcggtgacaaggtgg 1845
|||||||| |||||||| |||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 432 ctgatcaatcaggttgcccaagagatctgggtctgtgagaaccaggcggtgactaggtgg 491
Query: 1846 gaaggtgatatcatggatttcaaggcacacttgaaga 1882
|||||||||||||||||||||||| ||| |||||||
Sbjct: 492 gaaggtgatatcatggatttcaagcaacatttgaaga 528
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 243,723
Number of Sequences: 312970
Number of extensions: 243723
Number of successful extensions: 71068
Number of sequences better than 0.5: 132
Number of HSP's better than 0.5 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70702
Number of HSP's gapped (non-prelim): 266
length of query: 2083
length of database: 175,134,539
effective HSP length: 20
effective length of query: 2063
effective length of database: 168,875,139
effective search space: 348389411757
effective search space used: 348389411757
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)