BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD10d05.sg.3.3
(1563 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK125023.1|CK125023 BES1824111B1b02 BES1824 Hordeum vulg... 898 0.0
gb|BQ464046.1|BQ464046 HF01D06T HF Hordeum vulgare subsp. v... 817 0.0
gb|CA012711.1|CA012711 HT06D11r HT Hordeum vulgare subsp. v... 797 0.0
gb|CK123809.1|CK123809 BES1824105g18 BES1824 Hordeum vulgar... 795 0.0
gb|CK122636.1|CK122636 BES1824104n24 BES1824 Hordeum vulgar... 761 0.0
gb|BQ766958.1|BQ766958 EBro08_SQ007_H15_R root, 3 week, dro... 743 0.0
gb|CK122113.1|CK122113 BES1824101h15 BES1824 Hordeum vulgar... 737 0.0
gb|BE456015.3|BE456015 HVSMEg0019F06f Hordeum vulgare pre-a... 720 0.0
gb|BF254847.2|BF254847 HVSMEf0005D13f Hordeum vulgare seedl... 718 0.0
gb|AL508226.1|AL508226 AL508226 Hordeum vulgare Barke devel... 712 0.0
gb|AL508916.1|AL508916 AL508916 Hordeum vulgare Barke devel... 712 0.0
gb|AV913428.1|AV913428 AV913428 K. Sato unpublished cDNA li... 712 0.0
gb|BQ458383.1|BQ458383 HA05G12r HA Hordeum vulgare subsp. v... 712 0.0
gb|BQ471290.1|BQ471290 HV02A16r HV Hordeum vulgare subsp. v... 712 0.0
gb|CA031136.1|CA031136 HX09B23r HX Hordeum vulgare subsp. v... 712 0.0
gb|CA007468.1|CA007468 HU08A23r HU Hordeum vulgare subsp. v... 704 0.0
gb|CA020396.1|CA020396 HZ36C18r HZ Hordeum vulgare subsp. v... 704 0.0
gb|BU999119.1|BU999119 HI13F04r HI Hordeum vulgare subsp. v... 700 0.0
gb|BE216658.2|BE216658 HV_CEb0011B20f Hordeum vulgare seedl... 696 0.0
gb|BF256826.2|BF256826 HVSMEf0011B23f Hordeum vulgare seedl... 690 0.0
gb|BQ460510.1|BQ460510 HA09F15r HA Hordeum vulgare subsp. v... 690 0.0
gb|BQ664538.1|BQ664538 HV03L24u HV Hordeum vulgare subsp. v... 690 0.0
gb|BE519906.1|BE519906 HV_CEb0021K14f Hordeum vulgare seedl... 678 0.0
gb|CA018532.1|CA018532 HV08O11r HV Hordeum vulgare subsp. v... 678 0.0
gb|BQ470094.1|BQ470094 HX01M05T HX Hordeum vulgare subsp. v... 676 0.0
gb|CA018858.1|CA018858 HV09N21r HV Hordeum vulgare subsp. v... 674 0.0
gb|CA025955.1|CA025955 HZ53K05r HZ Hordeum vulgare subsp. v... 672 0.0
gb|BQ471977.1|BQ471977 HV04A24r HV Hordeum vulgare subsp. v... 670 0.0
gb|CA008745.1|CA008745 HU11P09r HU Hordeum vulgare subsp. v... 670 0.0
gb|AV923529.1|AV923529 AV923529 K. Sato unpublished cDNA li... 668 0.0
gb|BU972635.1|BU972635 HB22E05r BC Hordeum vulgare subsp. v... 668 0.0
gb|BU977042.1|BU977042 HA10L23r HA Hordeum vulgare subsp. v... 668 0.0
gb|BU982372.1|BU982372 HA26F11r HA Hordeum vulgare subsp. v... 666 0.0
gb|BU971916.1|BU971916 HB20A22r BC Hordeum vulgare subsp. v... 660 0.0
gb|BE421899.1|BE421899 HWM016cC.05r ITEC HWM Barley Leaf Li... 658 0.0
gb|BU975024.1|BU975024 HB29N19r BC Hordeum vulgare subsp. v... 658 0.0
gb|CA019907.1|CA019907 HV13K22r HV Hordeum vulgare subsp. v... 658 0.0
gb|CK122380.1|CK122380 BES1824103a22 BES1824 Hordeum vulgar... 656 0.0
gb|BQ755701.1|BQ755701 EBed07_SQ003_H12_R endosperm, 28 DPA... 652 0.0
gb|BU982079.1|BU982079 HA25H11r HA Hordeum vulgare subsp. v... 650 0.0
gb|BU996049.1|BU996049 HM12D24r HM Hordeum vulgare subsp. v... 648 0.0
gb|AV914822.1|AV914822 AV914822 K. Sato unpublished cDNA li... 646 0.0
gb|BG369153.2|BG369153 HVSMEi0022M23f Hordeum vulgare 20 DA... 642 0.0
gb|BG367283.2|BG367283 HVSMEi0011J21f Hordeum vulgare 20 DA... 638 0.0
gb|BM099098.2|BM099098 EBpi05_SQ002_O24_R pistil, 8 DPA, no... 636 0.0
gb|BU990378.1|BU990378 HF24N15r HF Hordeum vulgare subsp. v... 636 0.0
gb|BG301083.1|BG301083 HVSMEb0019H23f Hordeum vulgare seedl... 634 e-180
gb|AV915723.1|AV915723 AV915723 K. Sato unpublished cDNA li... 630 e-179
gb|BM100481.2|BM100481 EBma01_SQ005_F16_R maternal, 4 DPA, ... 628 e-178
gb|BG368292.2|BG368292 HVSMEi0017H10f Hordeum vulgare 20 DA... 626 e-178
gb|AL450872.1|AL450872 AL450872 Hordeum vulgare Barke etiol... 618 e-175
gb|BU984180.1|BU984180 HF03D14r HF Hordeum vulgare subsp. v... 618 e-175
gb|BE231111.2|BE231111 HVSMEg0016L19f Hordeum vulgare pre-a... 615 e-174
gb|BI947559.1|BI947559 HVSMEl0005O06f Hordeum vulgare spike... 611 e-173
gb|AL503479.1|AL503479 AL503479 Hordeum vulgare Barke roots... 603 e-171
gb|BQ466716.1|BQ466716 HS01F17T HS Hordeum vulgare subsp. v... 603 e-171
gb|BQ768691.1|BQ768691 EBro08_SQ012_L12_R root, 3 week, dro... 603 e-171
gb|BU994366.1|BU994366 HM06M20r HM Hordeum vulgare subsp. v... 603 e-171
gb|BU997871.1|BU997871 HI09E08r HI Hordeum vulgare subsp. v... 603 e-171
gb|CA013947.1|CA013947 HT09P03r HT Hordeum vulgare subsp. v... 603 e-171
gb|CA021718.1|CA021718 HZ40O11r HZ Hordeum vulgare subsp. v... 603 e-171
gb|BI950941.1|BI950941 HVSMEl0023L20f Hordeum vulgare spike... 597 e-169
gb|CA012206.1|CA012206 HT04M07r HT Hordeum vulgare subsp. v... 597 e-169
gb|BQ466050.1|BQ466050 HT01H01T HT Hordeum vulgare subsp. v... 595 e-168
gb|BM369127.2|BM369127 EBem07_SQ002_K08_R embryo, 28 DPA, n... 595 e-168
gb|BQ468487.1|BQ468487 HM01G11T HM Hordeum vulgare subsp. v... 587 e-166
gb|BG366996.2|BG366996 HVSMEi0009I06f Hordeum vulgare 20 DA... 585 e-165
gb|CA024420.1|CA024420 HZ49E07r HZ Hordeum vulgare subsp. v... 583 e-165
gb|CA024616.1|CA024616 HZ49N01r HZ Hordeum vulgare subsp. v... 583 e-165
gb|CA026252.1|CA026252 HZ55F23r HZ Hordeum vulgare subsp. v... 579 e-163
gb|BM098780.2|BM098780 EBpi05_SQ002_A15_R pistil, 8 DPA, no... 577 e-163
gb|CK124885.1|CK124885 BES1824110o18 BES1824 Hordeum vulgar... 577 e-163
gb|CA019697.1|CA019697 HV12N03r HV Hordeum vulgare subsp. v... 575 e-162
gb|BM098774.2|BM098774 EBpi05_SQ002_A08_R pistil, 8 DPA, no... 571 e-161
gb|BU981253.1|BU981253 HA23B05r HA Hordeum vulgare subsp. v... 571 e-161
gb|CA020858.1|CA020858 HZ38C04r HZ Hordeum vulgare subsp. v... 571 e-161
gb|BF257730.2|BF257730 HVSMEf0013L10f Hordeum vulgare seedl... 565 e-159
gb|CK122697.1|CK122697 BES1824105i03 BES1824 Hordeum vulgar... 563 e-159
gb|AL505625.1|AL505625 AL505625 Hordeum vulgare Barke roots... 561 e-158
gb|AV917019.1|AV917019 AV917019 K. Sato unpublished cDNA li... 559 e-157
gb|CB882422.1|CB882422 HL01N04w HL Hordeum vulgare subsp. v... 559 e-157
gb|BF256258.2|BF256258 HVSMEf0009K06f Hordeum vulgare seedl... 557 e-157
gb|BE214346.2|BE214346 HV_CEb0003C22f Hordeum vulgare seedl... 557 e-157
gb|CA018902.1|CA018902 HV09P21r HV Hordeum vulgare subsp. v... 557 e-157
gb|AL450613.1|AL450613 AL450613 Hordeum vulgare Barke etiol... 553 e-156
gb|CA002570.1|CA002570 HS07O14r HS Hordeum vulgare subsp. v... 551 e-155
gb|BG301076.1|BG301076 HVSMEb0019H13f Hordeum vulgare seedl... 549 e-155
gb|BI951347.1|BI951347 HVSMEl0025J17f Hordeum vulgare spike... 549 e-155
gb|BJ464517.1|BJ464517 BJ464517 K. Sato unpublished cDNA li... 549 e-155
gb|BQ469752.1|BQ469752 HZ01M06r HZ Hordeum vulgare subsp. v... 549 e-155
gb|CA021154.1|CA021154 HZ39E08r HZ Hordeum vulgare subsp. v... 549 e-155
gb|BG415390.1|BG415390 HVSMEk0006E19f Hordeum vulgare testa... 547 e-154
gb|AJ460669.1|AJ460669 AJ460669 S00002 Hordeum vulgare subs... 543 e-153
gb|CA025372.1|CA025372 HZ51P17r HZ Hordeum vulgare subsp. v... 543 e-153
gb|BF258051.2|BF258051 HVSMEf0014K01f Hordeum vulgare seedl... 539 e-152
gb|CA028137.1|CA028137 HZ61B19r HZ Hordeum vulgare subsp. v... 539 e-152
gb|BQ465554.1|BQ465554 HU03P22r HU Hordeum vulgare subsp. v... 537 e-151
gb|CA020467.1|CA020467 HZ36G10r HZ Hordeum vulgare subsp. v... 535 e-150
gb|CA020563.1|CA020563 HZ36K22r HZ Hordeum vulgare subsp. v... 535 e-150
gb|BQ467341.1|BQ467341 HS03H10r HS Hordeum vulgare subsp. v... 533 e-150
gb|CA017853.1|CA017853 HV06H21r HV Hordeum vulgare subsp. v... 531 e-149
gb|CA020010.1|CA020010 HV14B07r HV Hordeum vulgare subsp. v... 531 e-149
gb|BM369364.2|BM369364 EBem07_SQ003_F24_R embryo, 28 DPA, n... 529 e-149
gb|BI950303.1|BI950303 HVSMEl0020C19f Hordeum vulgare spike... 527 e-148
gb|BU989473.1|BU989473 HF21N10r HF Hordeum vulgare subsp. v... 525 e-147
gb|BF630084.2|BF630084 HVSMEb0007O10f Hordeum vulgare seedl... 523 e-147
gb|BQ469170.1|BQ469170 HM03J20r HM Hordeum vulgare subsp. v... 523 e-147
gb|AL505728.1|AL505728 AL505728 Hordeum vulgare Barke roots... 519 e-146
gb|BE060735.3|BE060735 HVSMEg0013D01f Hordeum vulgare pre-a... 519 e-146
gb|BQ470115.1|BQ470115 HX01N04T HX Hordeum vulgare subsp. v... 519 e-146
gb|BG417588.1|BG417588 HVSMEk0018G06f Hordeum vulgare testa... 513 e-144
gb|BI781002.2|BI781002 EBma03_SQ001_C01_R maternal, 8 DPA, ... 513 e-144
gb|CA018219.1|CA018219 HV07P18r HV Hordeum vulgare subsp. v... 513 e-144
gb|BU989526.1|BU989526 HF21P18r HF Hordeum vulgare subsp. v... 511 e-143
gb|BQ467032.1|BQ467032 HS02F17r HS Hordeum vulgare subsp. v... 502 e-140
gb|BI778907.2|BI778907 EBro01_SQ001_P17_R root, 3 week, hyd... 502 e-140
gb|CA002025.1|CA002025 HS06E17r HS Hordeum vulgare subsp. v... 502 e-140
gb|CA020047.1|CA020047 HV14C22r HV Hordeum vulgare subsp. v... 502 e-140
gb|CA022870.1|CA022870 HZ44J12r HZ Hordeum vulgare subsp. v... 502 e-140
gb|CA023838.1|CA023838 HZ47J01r HZ Hordeum vulgare subsp. v... 502 e-140
gb|CA026767.1|CA026767 HZ56O10r HZ Hordeum vulgare subsp. v... 502 e-140
gb|CA026780.1|CA026780 HZ56P02r HZ Hordeum vulgare subsp. v... 502 e-140
gb|BE196059.2|BE196059 HVSMEh0091E02f Hordeum vulgare 5-45 ... 500 e-140
gb|CA028243.1|CA028243 HZ61G16r HZ Hordeum vulgare subsp. v... 498 e-139
gb|CA002984.1|CA002984 HS09B05r HS Hordeum vulgare subsp. v... 486 e-135
gb|CA004067.1|CA004067 HS16H03r HS Hordeum vulgare subsp. v... 486 e-135
gb|CA004448.1|CA004448 HS17K04r HS Hordeum vulgare subsp. v... 486 e-135
gb|BU982277.1|BU982277 HA26A17r HA Hordeum vulgare subsp. v... 478 e-133
gb|BU972014.1|BU972014 HB20F15r BC Hordeum vulgare subsp. v... 476 e-132
gb|BM443163.2|BM443163 EBro02_SQ002_N18_R root, 3 week, hyd... 472 e-131
gb|CA024975.1|CA024975 HZ50N22r HZ Hordeum vulgare subsp. v... 470 e-131
gb|BJ463114.1|BJ463114 BJ463114 K. Sato unpublished cDNA li... 466 e-129
gb|BJ463700.1|BJ463700 BJ463700 K. Sato unpublished cDNA li... 466 e-129
gb|CA025440.1|CA025440 HZ52C19r HZ Hordeum vulgare subsp. v... 466 e-129
gb|CA017738.1|CA017738 HV06B15r HV Hordeum vulgare subsp. v... 464 e-129
gb|BF260275.2|BF260275 HVSMEf0021J03f Hordeum vulgare seedl... 462 e-128
gb|AL509371.1|AL509371 AL509371 Hordeum vulgare Barke devel... 458 e-127
gb|BQ753728.1|BQ753728 EBca01_SQ001_C13_R carpel, pre-anthe... 456 e-126
gb|BF621389.2|BF621389 HVSMEa0006M04f Hordeum vulgare seedl... 448 e-124
gb|BG344671.2|BG344671 HVSMEg0015A09f Hordeum vulgare pre-a... 446 e-123
gb|BE558883.3|BE558883 HV_CEb0020K15f Hordeum vulgare seedl... 446 e-123
gb|CA027013.1|CA027013 HZ57K07r HZ Hordeum vulgare subsp. v... 446 e-123
gb|AV918728.1|AV918728 AV918728 K. Sato unpublished cDNA li... 444 e-123
gb|AV920832.1|AV920832 AV920832 K. Sato unpublished cDNA li... 444 e-123
gb|BJ467872.1|BJ467872 BJ467872 K. Sato unpublished cDNA li... 444 e-123
gb|BJ467058.1|BJ467058 BJ467058 K. Sato unpublished cDNA li... 442 e-122
gb|BU981380.1|BU981380 HA23H03r HA Hordeum vulgare subsp. v... 440 e-122
gb|BJ467566.1|BJ467566 BJ467566 K. Sato unpublished cDNA li... 438 e-121
gb|BG365603.2|BG365603 HVSMEi0003F21f Hordeum vulgare 20 DA... 430 e-119
gb|BQ469772.1|BQ469772 HZ01N07r HZ Hordeum vulgare subsp. v... 428 e-118
gb|BJ462465.1|BJ462465 BJ462465 K. Sato unpublished cDNA li... 426 e-118
gb|BQ760455.1|BQ760455 EBro02_SQ002_N19_R root, 3 week, hyd... 426 e-118
gb|CA021878.1|CA021878 HZ41G19r HZ Hordeum vulgare subsp. v... 424 e-117
gb|CA023656.1|CA023656 HZ46P15r HZ Hordeum vulgare subsp. v... 424 e-117
gb|BG416485.1|BG416485 HVSMEk0012I13f Hordeum vulgare testa... 422 e-116
gb|BI947451.1|BI947451 HVSMEl0005I11f Hordeum vulgare spike... 418 e-115
gb|BG300612.1|BG300612 HVSMEb0017L05f Hordeum vulgare seedl... 412 e-113
gb|BU970762.1|BU970762 HB15J22r BC Hordeum vulgare subsp. v... 404 e-111
gb|BQ753933.1|BQ753933 EBca01_SQ002_F17_R carpel, pre-anthe... 398 e-109
gb|BQ471650.1|BQ471650 HV03A22r HV Hordeum vulgare subsp. v... 396 e-109
gb|AJ460295.1|AJ460295 AJ460295 S00002 Hordeum vulgare subs... 392 e-107
gb|BQ659648.1|BQ659648 HF01D06w HF Hordeum vulgare subsp. v... 392 e-107
gb|BQ665005.1|BQ665005 HX01M05w HX Hordeum vulgare subsp. v... 392 e-107
gb|BM372764.2|BM372764 EBpi05_SQ003_N22_R pistil, 8 DPA, no... 392 e-107
gb|AL503491.1|AL503491 AL503491 Hordeum vulgare Barke roots... 391 e-107
gb|BE214303.2|BE214303 HV_CEb0003A22f Hordeum vulgare seedl... 385 e-105
gb|CB875709.1|CB875709 HX09B23w HX Hordeum vulgare subsp. v... 377 e-103
gb|BM098928.2|BM098928 EBpi05_SQ002_H09_R pistil, 8 DPA, no... 375 e-102
gb|BJ464332.1|BJ464332 BJ464332 K. Sato unpublished cDNA li... 369 e-100
gb|CA027017.1|CA027017 HZ57K11r HZ Hordeum vulgare subsp. v... 359 2e-097
gb|CA025566.1|CA025566 HZ52I10r HZ Hordeum vulgare subsp. v... 353 1e-095
gb|BF066148.2|BF066148 HV_CEb0014P18f Hordeum vulgare seedl... 349 2e-094
gb|BQ768172.1|BQ768172 EBro08_SQ010_K21_R root, 3 week, dro... 343 1e-092
gb|CA029136.1|CA029136 HZ64E24r HZ Hordeum vulgare subsp. v... 343 1e-092
gb|BI779852.2|BI779852 EBem07_SQ001_D22_R embryo, 28 DPA, n... 337 7e-091
gb|CA018766.1|CA018766 HV09J12r HV Hordeum vulgare subsp. v... 337 7e-091
gb|CA026670.1|CA026670 HZ56J13r HZ Hordeum vulgare subsp. v... 323 1e-086
gb|BG414962.2|BG414962 HVSMEk0004G23f Hordeum vulgare testa... 321 4e-086
gb|AV918272.1|AV918272 AV918272 K. Sato unpublished cDNA li... 319 2e-085
gb|CA028398.1|CA028398 HZ61O09r HZ Hordeum vulgare subsp. v... 315 2e-084
gb|BM370415.2|BM370415 EBro08_SQ004_C16_R root, 3 week, dro... 305 2e-081
gb|BM098816.2|BM098816 EBpi05_SQ002_C09_R pistil, 8 DPA, no... 303 9e-081
gb|BF267547.3|BF267547 HV_CEa0018D23f Hordeum vulgare seedl... 299 1e-079
gb|AJ432796.1|AJ432796 AJ432796 S00002 Hordeum vulgare subs... 299 1e-079
gb|BQ658183.1|BQ658183 HA05G12u HA Hordeum vulgare subsp. v... 299 1e-079
gb|CA029004.1|CA029004 HZ63O14r HZ Hordeum vulgare subsp. v... 299 1e-079
gb|BF257208.1|BF257208 HVSMEf0012D05f Hordeum vulgare seedl... 293 9e-078
gb|CA024562.1|CA024562 HZ49K13r HZ Hordeum vulgare subsp. v... 293 9e-078
gb|BI950844.1|BI950844 HVSMEl0023G09f Hordeum vulgare spike... 291 4e-077
gb|CA000633.1|CA000633 HS07O14u HS Hordeum vulgare subsp. v... 287 5e-076
gb|CA029172.1|CA029172 HZ64G20r HZ Hordeum vulgare subsp. v... 287 5e-076
gb|BJ462488.1|BJ462488 BJ462488 K. Sato unpublished cDNA li... 276 2e-072
gb|AJ460293.1|AJ460293 AJ460293 S00002 Hordeum vulgare subs... 266 2e-069
gb|BU976820.1|BU976820 HA10F23r HA Hordeum vulgare subsp. v... 256 2e-066
gb|BU976821.1|BU976821 HA10F23u HA Hordeum vulgare subsp. v... 256 2e-066
gb|AL500051.1|AL500051 AL500051 Hordeum vulgare Barke etiol... 254 8e-066
gb|BQ471875.1|BQ471875 HV03L24r HV Hordeum vulgare subsp. v... 254 8e-066
gb|AJ460292.1|AJ460292 AJ460292 S00002 Hordeum vulgare subs... 250 1e-064
gb|BU969785.1|BU969785 HB12I21r BC Hordeum vulgare subsp. v... 250 1e-064
gb|BQ662254.1|BQ662254 HS01F17w HS Hordeum vulgare subsp. v... 248 5e-064
gb|BQ660987.1|BQ660987 HM01G11w HM Hordeum vulgare subsp. v... 240 1e-061
gb|BJ462231.1|BJ462231 BJ462231 K. Sato unpublished cDNA li... 238 5e-061
gb|BU972321.1|BU972321 HB21F03r BC Hordeum vulgare subsp. v... 236 2e-060
gb|AL499668.1|AL499668 AL499668 Hordeum vulgare Barke etiol... 228 4e-058
gb|CA005947.1|CA005947 HU08A23u HU Hordeum vulgare subsp. v... 224 7e-057
gb|AJ463581.1|AJ463581 AJ463581 S00002 Hordeum vulgare subs... 220 1e-055
gb|AJ463582.1|AJ463582 AJ463582 S00002 Hordeum vulgare subs... 220 1e-055
gb|AL502885.1|AL502885 AL502885 Hordeum vulgare Barke roots... 214 7e-054
gb|BQ763368.1|BQ763368 EBro02_SQ008_J03 _R root, 3 week, hy... 210 1e-052
gb|CA017194.1|CA017194 HV14H01u HV Hordeum vulgare subsp. v... 210 1e-052
gb|AL511462.1|AL511462 AL511462 Hordeum vulgare Barke devel... 192 2e-047
gb|BQ760631.1|BQ760631 EBro03_SQ003_A11_R root, 3 week, wat... 192 2e-047
gb|AL499787.1|AL499787 AL499787 Hordeum vulgare Barke etiol... 190 1e-046
gb|BF621285.1|BF621285 HVSMEa0006F11f Hordeum vulgare seedl... 182 2e-044
gb|CA022371.1|CA022371 HZ42O19r HZ Hordeum vulgare subsp. v... 176 1e-042
gb|CB859085.1|CB859085 HI09E08w HI Hordeum vulgare subsp. v... 176 1e-042
gb|BU974643.1|BU974643 HB28K04r BC Hordeum vulgare subsp. v... 174 6e-042
gb|BQ757499.1|BQ757499 EBem10_SQ004_F05_R embryo, 2 Day ger... 172 2e-041
gb|BU996295.1|BU996295 HM13C15r HM Hordeum vulgare subsp. v... 170 9e-041
gb|BI952199.1|BI952199 HVSMEm0004P17f Hordeum vulgare green... 167 1e-039
gb|BQ464446.1|BQ464446 HF02E23r HF Hordeum vulgare subsp. v... 167 1e-039
gb|BQ464538.1|BQ464538 HF02J02r HF Hordeum vulgare subsp. v... 167 1e-039
gb|BJ454425.1|BJ454425 BJ454425 K. Sato unpublished cDNA li... 161 9e-038
gb|CK124230.1|CK124230 BES1824108a21 BES1824 Hordeum vulgar... 157 1e-036
gb|BQ665020.1|BQ665020 HX01N04w HX Hordeum vulgare subsp. v... 155 5e-036
gb|BG368257.2|BG368257 HVSMEi0017D05f Hordeum vulgare 20 DA... 139 3e-031
gb|BF631153.2|BF631153 HVSMEb0015C01f Hordeum vulgare seedl... 137 1e-030
gb|BU987528.1|BU987528 HF15A01r HF Hordeum vulgare subsp. v... 137 1e-030
gb|AJ463583.1|AJ463583 AJ463583 S00002 Hordeum vulgare subs... 131 8e-029
gb|BQ657563.1|BQ657563 HA07O01u HA Hordeum vulgare subsp. v... 131 8e-029
gb|BQ664591.1|BQ664591 HV03P24u HV Hordeum vulgare subsp. v... 131 8e-029
gb|CB880519.1|CB880519 HM06M20w HM Hordeum vulgare subsp. v... 131 8e-029
gb|AV836821.1|AV836821 AV836821 K. Sato unpublished cDNA li... 129 3e-028
gb|AV923530.1|AV923530 AV923530 K. Sato unpublished cDNA li... 129 3e-028
gb|BQ661465.1|BQ661465 HM03J20u HM Hordeum vulgare subsp. v... 129 3e-028
gb|BQ665980.1|BQ665980 HZ01M06u HZ Hordeum vulgare subsp. v... 129 3e-028
gb|CA009913.1|CA009913 HT12E17u HT Hordeum vulgare subsp. v... 129 3e-028
gb|BU978949.1|BU978949 HA14L18r HA Hordeum vulgare subsp. v... 127 1e-027
gb|BJ466773.1|BJ466773 BJ466773 K. Sato unpublished cDNA li... 125 5e-027
gb|CA001494.1|CA001494 HS17K04u HS Hordeum vulgare subsp. v... 123 2e-026
gb|CA023386.1|CA023386 HZ46B06r HZ Hordeum vulgare subsp. v... 123 2e-026
gb|BJ466052.1|BJ466052 BJ466052 K. Sato unpublished cDNA li... 121 7e-026
gb|BJ466102.1|BJ466102 BJ466102 K. Sato unpublished cDNA li... 115 5e-024
gb|BQ657184.1|BQ657184 HA09F15u HA Hordeum vulgare subsp. v... 115 5e-024
gb|BQ662647.1|BQ662647 HS03H10u HS Hordeum vulgare subsp. v... 115 5e-024
gb|BQ663771.1|BQ663771 HU03P22u HU Hordeum vulgare subsp. v... 115 5e-024
gb|BQ666001.1|BQ666001 HZ01N07u HZ Hordeum vulgare subsp. v... 115 5e-024
gb|BM375767.2|BM375767 EBem06_SQ004_F17_R embryo, 21 DPA, n... 115 5e-024
gb|CA016201.1|CA016201 HV09P21u HV Hordeum vulgare subsp. v... 115 5e-024
gb|AL512039.1|AL512039 AL512039 Hordeum vulgare Barke devel... 107 1e-021
gb|BM443739.2|BM443739 EBem09_SQ001_F12_R embryo, 1 Day ger... 107 1e-021
gb|BG368264.2|BG368264 HVSMEi0017D15f Hordeum vulgare 20 DA... 105 4e-021
gb|CA018354.1|CA018354 HV08G04r HV Hordeum vulgare subsp. v... 100 3e-019
gb|BU999984.1|BU999984 HS16H03u HS Hordeum vulgare subsp. v... 98 1e-018
gb|CA017217.1|CA017217 HV14C22u HV Hordeum vulgare subsp. v... 98 1e-018
gb|CA017272.1|CA017272 HV14B07u HV Hordeum vulgare subsp. v... 98 1e-018
gb|BU981748.1|BU981748 HA24I10r HA Hordeum vulgare subsp. v... 96 4e-018
gb|AV913672.1|AV913672 AV913672 K. Sato unpublished cDNA li... 94 2e-017
gb|AJ460294.1|AJ460294 AJ460294 S00002 Hordeum vulgare subs... 94 2e-017
gb|AJ460370.1|AJ460370 AJ460370 S00002 Hordeum vulgare subs... 94 2e-017
gb|BU987161.1|BU987161 HF13P14r HF Hordeum vulgare subsp. v... 94 2e-017
gb|AL511424.1|AL511424 AL511424 Hordeum vulgare Barke devel... 88 1e-015
gb|CA005073.1|CA005073 HU11P09u HU Hordeum vulgare subsp. v... 88 1e-015
gb|BQ761554.1|BQ761554 EBem10_SQ001_G06_R embryo, 2 Day ger... 86 4e-015
gb|BU977043.1|BU977043 HA10L23u HA Hordeum vulgare subsp. v... 86 4e-015
gb|CA024269.1|CA024269 HZ48N10r HZ Hordeum vulgare subsp. v... 86 4e-015
gb|CA016458.1|CA016458 HV08O11u HV Hordeum vulgare subsp. v... 82 6e-014
gb|CA016727.1|CA016727 HV06I08u HV Hordeum vulgare subsp. v... 82 6e-014
gb|CA018032.1|CA018032 HV07D07r HV Hordeum vulgare subsp. v... 82 6e-014
gb|AL502980.1|AL502980 AL502980 Hordeum vulgare Barke roots... 78 1e-012
gb|BF267484.2|BF267484 HV_CEa0018B06f Hordeum vulgare seedl... 78 1e-012
gb|AL504695.1|AL504695 AL504695 Hordeum vulgare Barke roots... 74 2e-011
gb|BI778219.1|BI778219 EBro07_SQ002_J02_R root, 3 week, red... 74 2e-011
gb|BM101463.1|BM101463 EBpi01_SQ003_O21_R pistil, 1 DPA, no... 74 2e-011
gb|BM101468.1|BM101468 EBpi01_SQ003_P02_R pistil, 1 DPA, no... 74 2e-011
gb|AJ460296.1|AJ460296 AJ460296 S00002 Hordeum vulgare subs... 74 2e-011
gb|BQ134670.1|BQ134670 LP30108 Lemma/palea-enriched cDNA li... 74 2e-011
gb|AL501395.1|AL501395 AL501395 Hordeum vulgare Barke roots... 68 1e-009
gb|CA016170.1|CA016170 HV09N21u HV Hordeum vulgare subsp. v... 66 4e-009
gb|CA016853.1|CA016853 HV06B15u HV Hordeum vulgare subsp. v... 64 1e-008
gb|BF624065.3|BF624065 HVSMEa0009C06f Hordeum vulgare seedl... 60 2e-007
gb|BE558280.2|BE558280 HV_CEb0017B03f Hordeum vulgare seedl... 60 2e-007
gb|AL450571.1|AL450571 AL450571 Hordeum vulgare Barke etiol... 54 1e-005
gb|AL499749.1|AL499749 AL499749 Hordeum vulgare Barke etiol... 54 1e-005
gb|AL500888.1|AL500888 AL500888 Hordeum vulgare Barke roots... 50 2e-004
gb|BQ765388.1|BQ765388 EBro03_SQ007_D02_R root, 3 week, wat... 48 9e-004
>gb|CK125023.1|CK125023 BES1824111B1b02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0211 5-PRIME, mRNA sequence
Length = 865
Score = 898 bits (453), Expect = 0.0
Identities = 708/793 (89%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 73 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 132
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 133 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 192
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 193 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 252
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 253 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 312
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 313 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 372
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 373 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 432
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 433 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 492
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 493 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 552
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 553 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 612
Query: 650 atccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtat 709
||||||||||||||||| ||||||||| ||||||| || |||||||| ||||||
Sbjct: 613 atccctgactatgatgcacccacacagatggtcaaacctcgtgagaggaacagcaggtat 672
Query: 710 gttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacctt 769
|||||||| ||| |||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 673 gttgatgccgtcctgactattcccaagggaacattgttccccatgtgtggcatgaacctt 732
Query: 770 gccttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggccag 829
|| || ||| | | ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 733 gcttttgaccgtcagctcatcggccctgcaatgtactttggcctcatgggtgatggccag 792
Query: 830 cccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgaccac 889
|| || ||||||||||| ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 793 cctattggtcgctacgatgacatgtgggctggatggtgcgtcaaggtcatctgcgaccac 852
Query: 890 ctgagcctgggag 902
||||||| ||||
Sbjct: 853 ttgagccttggag 865
>gb|BQ464046.1|BQ464046 HF01D06T HF Hordeum vulgare subsp. vulgare cDNA clone HF01D06
5-PRIME, mRNA sequence
Length = 700
Score = 817 bits (412), Expect = 0.0
Identities = 628/700 (89%)
Strand = Plus / Plus
Query: 308 gactacgagctctacaaccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgc 367
|||||||| || |||||||||||||||||||||||||| ||||| || |||||||| |||
Sbjct: 1 gactacgacctttacaaccgcaacgacatcaaccgcattctcggcccaaaggcctcatgc 60
Query: 368 atctccttcaaggactccgcctgccgctgcttcggctacatggtctccaagaagaagtac 427
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 atctccttcaaggactccgcgtgccgctgcttcggctacatggtctccaaaaagaagtac 120
Query: 428 atctacaccatcgacgacgactgcttcgttgccaaggacccatctggcaaggatatcaat 487
||| |||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 121 gtcttcaccatcgacgacgactgcttcgtggccaaggacccatctggcaaagacatcaat 180
Query: 488 gctcttgagcagcacatcaagaacctcctcagcccatccaccccgttcttcttcaacacc 547
||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||
Sbjct: 181 gctcttgagcagcacatcaagaacctcctcagcccgtcaaccccgtttttcttcaatacc 240
Query: 548 ctgtacgacccctaccgtgagggtgctgactttgtgcgtggataccccttcagcctcagg 607
|||| |||||||||||||| || || |||||||| |||||||||||||||||||| |||
Sbjct: 241 ttgtatgacccctaccgtgaaggcgcggactttgttcgtggataccccttcagccttagg 300
Query: 608 gagggtgctcacaccgccgtctcccacggcctgtggctgaacatccctgactatgatgct 667
|||||||| | ||| || ||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 301 gagggtgcacccactgctgtctctcatggcctttggctgaacatccctgactatgatgca 360
Query: 668 cccacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgaca 727
||||||||| ||||||| || |||||||| |||||||||||||| ||| ||||
Sbjct: 361 cccacacagatggtcaaacctcgtgagaggaacagcaggtatgttgatgccgtcctgact 420
Query: 728 atccccaagggaaccttgttccccatgtgtggcatgaaccttgccttcgacagggatctc 787
|| ||||||||||| ||||||||||||||||||||||||||||| || ||| | | |||
Sbjct: 421 attcccaagggaacattgttccccatgtgtggcatgaaccttgcttttgaccgtcagctc 480
Query: 788 attggccctgctatgtactttggtctcatgggtgatggccagcccatcggtcgctacgac 847
|| |||||||| ||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 481 atcggccctgcaatgtactttggcctcatgggtgatggccagcctattggtcgctacgat 540
Query: 848 gacatgtgggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaag 907
||||||||||| |||||||| || |||||||||||||||||| ||||||| ||||| |||
Sbjct: 541 gacatgtgggctggatggtgcgtcaaggtcatctgcgaccacttgagccttggagtgaag 600
Query: 908 actggcctgccatacatctggcacagcaaggctagcaaccccttcgttaacttgaagaag 967
||||||||||||||| | ||||||||||||||||||||||| || || ||||||||||||
Sbjct: 601 actggcctgccatacctgtggcacagcaaggctagcaacccatttgtcaacttgaagaag 660
Query: 968 gaatacaagggcatcttctggcaggaggacatcatcccct 1007
|| |||||||||||||||||||||||||||||||| ||||
Sbjct: 661 gagtacaagggcatcttctggcaggaggacatcattccct 700
>gb|CA012711.1|CA012711 HT06D11r HT Hordeum vulgare subsp. vulgare cDNA clone HT06D11
5-PRIME, mRNA sequence
Length = 700
Score = 797 bits (402), Expect = 0.0
Identities = 607/674 (90%), Gaps = 1/674 (0%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 28 acgccgctgctca-ggacgagctggacatcgtgatcccgacgatccgcaacctcgacttc 86
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 87 ctcgagatgtggcgccccttcttccagccgtaccacctcatcatcgtccaggacggcgac 146
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
|| | ||| |||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 147 cccagtaaggccatcaaggttcccgagggcttcgactacgacctttacaaccgcaacgac 206
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
||||||||||| ||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 207 atcaaccgcattctcggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgc 266
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 267 tgcttcggctacatggtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttc 326
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 327 gtggccaaggacccatctggcaaagacatcaatgctcttgagcagcacatcaagaacctc 386
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|||||||| || |||||||| |||||||| ||| |||| |||||||||||||| || ||
Sbjct: 387 ctcagcccgtcaaccccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcg 446
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|||||||| |||||||||||||||||||| ||||||||||| | ||| || ||||| ||
Sbjct: 447 gactttgttcgtggataccccttcagccttagggagggtgcacccactgctgtctctcat 506
Query: 635 ggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcccaaggag 694
||||| |||||||||||||||||||||||||| ||||||||| ||||||| || |||
Sbjct: 507 ggcctttggctgaacatccctgactatgatgcacccacacagatggtcaaacctcgtgag 566
Query: 695 aggaatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttccccatg 754
||||| |||||||||||||| ||| |||| || ||||||||||| ||||||||||||
Sbjct: 567 aggaacagcaggtatgttgatgccgtcctgactattcccaagggaacattgttccccatg 626
Query: 755 tgtggcatgaaccttgccttcgacagggatctcattggccctgctatgtactttggtctc 814
||||||||||||||||| || ||| | | ||||| |||||||| ||||||||||| |||
Sbjct: 627 tgtggcatgaaccttgcttttgaccgtcagctcatcggccctgcaatgtactttggcctc 686
Query: 815 atgggtgatggcca 828
||||||||||||||
Sbjct: 687 atgggtgatggcca 700
>gb|CK123809.1|CK123809 BES1824105g18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G185 5-PRIME, mRNA sequence
Length = 766
Score = 795 bits (401), Expect = 0.0
Identities = 632/709 (89%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 58 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 117
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 118 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 177
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 178 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 237
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 238 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 297
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 298 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 357
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 358 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 417
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 418 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 477
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 478 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 537
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 538 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 597
Query: 650 atccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtat 709
||||||||||||||||| ||||||||| ||||||| || |||||||| ||||||
Sbjct: 598 atccctgactatgatgcacccacacagatggtcaaacctcgtgagaggaacagcaggtat 657
Query: 710 gttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacctt 769
|||||||| ||| |||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 658 gttgatgccgtcctgactattcccaagggaacattgttccccatgtgtggcatgaacctt 717
Query: 770 gccttcgacagggatctcattggccctgctatgtactttggtctcatgg 818
|| || ||| | | ||||| |||||||| ||||||||||| |||||||
Sbjct: 718 gcttttgaccgtcagctcatcggccctgcaatgtactttggcctcatgg 766
>gb|CK122636.1|CK122636 BES1824104n24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N244 5-PRIME, mRNA sequence
Length = 790
Score = 761 bits (384), Expect = 0.0
Identities = 647/734 (88%), Gaps = 2/734 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 58 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 117
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 118 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 177
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 178 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 237
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 238 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 297
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 298 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 357
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 358 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 417
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 418 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 477
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 478 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 537
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 538 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 597
Query: 650 atccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtat 709
||||||||||||||||| ||||||||| ||||||| || |||| ||| ||||||
Sbjct: 598 atccctgactatgatgcacccacacagatggtcaaacctcgtgagangaacagcaggtat 657
Query: 710 gttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacctt 769
|||||||| ||| |||| || |||| |||| |||||||||||||||||||||||||||
Sbjct: 658 gttgatgccgtcctgactat-tccaanggaaaattgttccccatgtgtggcatgaacctt 716
Query: 770 gccttcgacagggatctcattggccctgctatgtactttggt-ctcatgggtgatggcca 828
| || ||| | | ||||| ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 717 gnttttgaccgtcagctcatcggccctgnaatgtactttggncctcatgggngatggcca 776
Query: 829 gcccatcggtcgct 842
||| || |||||||
Sbjct: 777 gcctattggtcgct 790
>gb|BQ766958.1|BQ766958 EBro08_SQ007_H15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_H15 5', mRNA sequence
Length = 730
Score = 743 bits (375), Expect = 0.0
Identities = 593/663 (89%), Gaps = 2/663 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 69 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 128
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 129 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 188
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 189 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 248
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 249 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 308
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 309 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 368
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 369 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 428
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 429 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 488
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 489 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 548
Query: 590 taccccttcagcctca-gggagggtgctcacaccgccgtctcccacggcctgtggctgaa 648
|||||||||||||| | |||||||||| | ||| || ||||| || ||||| ||||||||
Sbjct: 549 taccccttcagccttaggggagggtgcacccactgctgtctctcatggcctttggctgaa 608
Query: 649 catccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggta 708
|||||||||||||||||| ||||||||| ||||||| || |||||||| |||||
Sbjct: 609 catccctgactatgatgcacccacacagatggtcaaacctcgtgagaggaacagcaggta 668
Query: 709 tgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacct 768
||||||||| ||| |||| || ||| ||||||| ||||||||||||||||||||||||||
Sbjct: 669 tgttgatgccgtcctgactattccc-agggaacattgttccccatgtgtggcatgaacct 727
Query: 769 tgc 771
|||
Sbjct: 728 tgc 730
>gb|CK122113.1|CK122113 BES1824101h15 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H151 5-PRIME, mRNA sequence
Length = 755
Score = 737 bits (372), Expect = 0.0
Identities = 592/663 (89%), Gaps = 2/663 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 73 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 132
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 133 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 192
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 193 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 252
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 253 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 312
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 313 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 372
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 373 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 432
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 433 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 492
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 493 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 552
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || |||| |||||||||
Sbjct: 553 taccccttcagccttagggagggtgcacccactgctgtctctcatggccnttggctgaac 612
Query: 650 at-ccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggta 708
|| ||||||||||||||| ||||||||| ||||||| || |||||||| |||||
Sbjct: 613 atcccctgactatgatgcacccacacagatggtcaaacctcgtgagaggaacagcaggta 672
Query: 709 tgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacct 768
||||||||| ||| |||| || |||||||||| ||||||||||||||||||||||||||
Sbjct: 673 tgttgatgccgtcctgactat-tccaagggaacattgttccccatgtgtggcatgaacct 731
Query: 769 tgc 771
|||
Sbjct: 732 tgc 734
>gb|BE456015.3|BE456015 HVSMEg0019F06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019F06f, mRNA sequence
Length = 866
Score = 720 bits (363), Expect = 0.0
Identities = 659/756 (87%), Gaps = 2/756 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 47 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 106
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 107 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 166
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 167 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 226
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 227 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 286
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 287 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcngctacatg 346
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 347 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 406
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 407 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 466
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 467 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 526
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 527 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 586
Query: 650 atccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtat 709
|| |||||||||||||| |||||||| ||||||| || |||| ||| | | ||||
Sbjct: 587 atncctgactatgatgcacccacacaaatggtcaaaacctctgagaagaacaacaagtat 646
Query: 710 gttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacctt 769
|||||||| || |||| || |||| ||||| ||| | ||||||||||||||||||| |
Sbjct: 647 gttgatgccgtnctgactat-tccaaaggaacattggttcccatgtgtggcatgaaccct 705
Query: 770 gccttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggccag 829
|| || ||| | | || ||| ||||||| ||||||||||| | |||||||||||||||
Sbjct: 706 gcttttgac-cgcagcttattcgccctgcaatgtactttgggcccatgggtgatggccaa 764
Query: 830 cccatcggtcgctacgacgacatgtgggcaggatgg 865
|||| ||||||| | | |||||||||| ||||||
Sbjct: 765 gccattggtcgcttccaaaacatgtgggctggatgg 800
>gb|BF254847.2|BF254847 HVSMEf0005D13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005D13f, mRNA sequence
Length = 834
Score = 718 bits (362), Expect = 0.0
Identities = 589/662 (88%), Gaps = 2/662 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 69 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 128
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 129 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 188
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 189 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 248
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 249 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 308
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 309 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 368
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 369 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 428
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 429 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccggcaacc 488
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 489 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 548
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 549 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 608
Query: 650 atccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtat 709
||||||||||||||||| ||||||||| ||||||| || |||||||| ||||||
Sbjct: 609 atccctgactatgatgcacccacacagatggtcaaacctcgtgagaggaacagcaggtat 668
Query: 710 gttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacctt 769
|||||||| || |||| || |||||||||| || || |||||||||||||||||||||
Sbjct: 669 gttgatgccgttctgactat-tccaagggaacatt-ttgcccatgtgtggcatgaacctt 726
Query: 770 gc 771
||
Sbjct: 727 gc 728
>gb|AL508226.1|AL508226 AL508226 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08C08V 5',
mRNA sequence
Length = 700
Score = 712 bits (359), Expect = 0.0
Identities = 521/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 60 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 119
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 120 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 179
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 180 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 239
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 240 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 299
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 300 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 359
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 360 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 419
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 420 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 479
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 480 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 539
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 540 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 599
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 600 atccctgactatgatgcacccacacagatggtcaa 634
>gb|AL508916.1|AL508916 AL508916 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10C22V 5',
mRNA sequence
Length = 700
Score = 712 bits (359), Expect = 0.0
Identities = 521/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 56 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 115
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 116 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 175
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 176 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 235
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 236 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 295
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 296 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 355
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 356 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 415
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 416 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 475
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 476 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 535
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 536 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 595
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 596 atccctgactatgatgcacccacacagatggtcaa 630
>gb|AV913428.1|AV913428 AV913428 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22a15 5', mRNA sequence
Length = 656
Score = 712 bits (359), Expect = 0.0
Identities = 521/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 72 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 131
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 132 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 191
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 192 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 251
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 252 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 311
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 312 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 371
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 372 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 431
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 432 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 491
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 492 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 551
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 552 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 611
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 612 atccctgactatgatgcacccacacagatggtcaa 646
>gb|BQ458383.1|BQ458383 HA05G12r HA Hordeum vulgare subsp. vulgare cDNA clone HA05G12
5-PRIME, mRNA sequence
Length = 643
Score = 712 bits (359), Expect = 0.0
Identities = 521/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 67 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 126
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 127 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 186
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 187 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 246
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 247 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 306
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 307 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 366
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 367 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 426
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 427 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 486
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 487 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 546
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 547 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 606
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 607 atccctgactatgatgcacccacacagatggtcaa 641
>gb|BQ471290.1|BQ471290 HV02A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV02A16
5-PRIME, mRNA sequence
Length = 626
Score = 712 bits (359), Expect = 0.0
Identities = 521/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 17 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 76
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 77 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 136
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 137 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 196
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 197 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 256
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 316
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 317 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 376
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 377 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 436
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 437 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 496
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 497 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 556
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 557 atccctgactatgatgcacccacacagatggtcaa 591
>gb|CA031136.1|CA031136 HX09B23r HX Hordeum vulgare subsp. vulgare cDNA clone HX09B23
5-PRIME, mRNA sequence
Length = 638
Score = 712 bits (359), Expect = 0.0
Identities = 521/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 31 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 90
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 91 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 150
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 151 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 210
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 211 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 270
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 271 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 330
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 331 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 390
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 391 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 450
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 451 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 510
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 511 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 570
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 571 atccctgactatgatgcacccacacagatggtcaa 605
>gb|CA007468.1|CA007468 HU08A23r HU Hordeum vulgare subsp. vulgare cDNA clone HU08A23
5-PRIME, mRNA sequence
Length = 593
Score = 704 bits (355), Expect = 0.0
Identities = 523/579 (90%)
Strand = Plus / Plus
Query: 193 gacgatccgcaacctcgacttcctggagatgtggcggcccttcttccagccctaccacct 252
|||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 11 gacgatccgcaacctcgacttcctcgagatgtggcgccccttcttccagccgtaccacct 70
Query: 253 catcatcgtgcaggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgacta 312
||||||||| |||||||||||||| | ||| |||||||||| |||||||||||||||||
Sbjct: 71 catcatcgtccaggacggcgaccccagtaaggccatcaaggttcccgagggcttcgacta 130
Query: 313 cgagctctacaaccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctc 372
||| || |||||||||||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 131 cgacctttacaaccgcaacgacatcaaccgcattctcggcccaaaggcctcatgcatctc 190
Query: 373 cttcaaggactccgcctgccgctgcttcggctacatggtctccaagaagaagtacatcta 432
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 191 cttcaaggactccgcgtgccgctgcttcggctacatggtctccaaaaagaagtacgtctt 250
Query: 433 caccatcgacgacgactgcttcgttgccaaggacccatctggcaaggatatcaatgctct 492
|||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 251 caccatcgacgacgactgcttcgtggccaaggacccatctggcaaagacatcaatgctct 310
Query: 493 tgagcagcacatcaagaacctcctcagcccatccaccccgttcttcttcaacaccctgta 552
|||||||||||||||||||||||||||||| || |||||||| |||||||| ||| ||||
Sbjct: 311 tgagcagcacatcaagaacctcctcagcccgtcaaccccgtttttcttcaataccttgta 370
Query: 553 cgacccctaccgtgagggtgctgactttgtgcgtggataccccttcagcctcagggaggg 612
|||||||||||||| || || |||||||| |||||||||||||||||||| ||||||||
Sbjct: 371 tgacccctaccgtgaaggcgcggactttgttcgtggataccccttcagccttagggaggg 430
Query: 613 tgctcacaccgccgtctcccacggcctgtggctgaacatccctgactatgatgctcccac 672
||| | ||| || ||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 431 tgcacccactgctgtctctcatggcctttggctgaacatccctgactatgatgcacccac 490
Query: 673 acagctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgacaatccc 732
|||| ||||||| || |||||||| |||||||||||||| ||| |||| || ||
Sbjct: 491 acagatggtcaaacctcgtgagaggaacagcaggtatgttgatgccgtcctgactattcc 550
Query: 733 caagggaaccttgttccccatgtgtggcatgaaccttgc 771
||||||||| |||||||||||||||||||||||||||||
Sbjct: 551 caagggaacattgttccccatgtgtggcatgaaccttgc 589
>gb|CA020396.1|CA020396 HZ36C18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36C18
5-PRIME, mRNA sequence
Length = 591
Score = 704 bits (355), Expect = 0.0
Identities = 514/567 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 25 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 84
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 85 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 144
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 145 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 204
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 205 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 264
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 324
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 325 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 384
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 385 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 444
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 445 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 504
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 505 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 564
Query: 650 atccctgactatgatgctcccacacag 676
||||||||||||||||| |||||||||
Sbjct: 565 atccctgactatgatgcacccacacag 591
>gb|BU999119.1|BU999119 HI13F04r HI Hordeum vulgare subsp. vulgare cDNA clone HI13F04
5-PRIME, mRNA sequence
Length = 643
Score = 700 bits (353), Expect = 0.0
Identities = 512/565 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 79 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 138
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 139 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 198
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 199 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 258
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 259 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 318
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 319 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 378
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 379 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 438
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 439 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 498
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 499 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 558
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 559 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 618
Query: 650 atccctgactatgatgctcccacac 674
||||||||||||||||| |||||||
Sbjct: 619 atccctgactatgatgcacccacac 643
>gb|BE216658.2|BE216658 HV_CEb0011B20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011B20f, mRNA sequence
Length = 948
Score = 696 bits (351), Expect = 0.0
Identities = 519/575 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 69 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 128
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 129 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 188
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 189 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 248
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 249 aaggttcccgagggcttcgactacgacttttacaaccgcaacgacatcaaccgcattctc 308
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 309 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 368
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 369 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 428
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 429 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 488
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| | || |||||||| ||||||
Sbjct: 489 ccgtttttcttcaataccttgtatgacccctaccgtgaaagcgcggactttgttcgtgga 548
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 549 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 608
Query: 650 atccctgactatgatgctcccacacagctggtcaa 684
||||||||||||||||| ||||||||| |||||||
Sbjct: 609 atccctgactatgatgcacccacacagatggtcaa 643
>gb|BF256826.2|BF256826 HVSMEf0011B23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011B23f, mRNA sequence
Length = 819
Score = 690 bits (348), Expect = 0.0
Identities = 586/663 (88%), Gaps = 2/663 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 69 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 128
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 129 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 188
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 189 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 248
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 249 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 308
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 309 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 368
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 369 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 428
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || |||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 429 tctggcaaagacatcaatgctcttgaacagcacatcaagaacctcctcagcccgtcaacc 488
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| ||||| || ||| |||| |||||||||||||| || || |||| ||| ||||||
Sbjct: 489 ccgtttttctttaataccttgtatgacccctaccgtgaaggcgcggactntgttcgtgga 548
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| | ||||||||| | ||| || | ||| || || || |||||||||
Sbjct: 549 taccccttcagccttaaggagggtgcccccactgctggctctcatggactttggctgaac 608
Query: 650 atccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtat 709
||||||||||||||||| ||||||||| ||||||| || |||||||| | ||||
Sbjct: 609 atccctgactatgatgcacccacacagatggtcaaacctcgtgagaggaacagcacgtat 668
Query: 710 gttgatg-ctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacct 768
||||||| | ||| |||| || ||||||||||| |||||||||||| |||||||||||||
Sbjct: 669 gttgatgcccgtc-tgactattcccaagggaacattgttccccatgggtggcatgaacct 727
Query: 769 tgc 771
|||
Sbjct: 728 tgc 730
>gb|BQ460510.1|BQ460510 HA09F15r HA Hordeum vulgare subsp. vulgare cDNA clone HA09F15
5-PRIME, mRNA sequence
Length = 548
Score = 690 bits (348), Expect = 0.0
Identities = 471/512 (91%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 33 acgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctcgacttc 92
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 93 ctcgagatgtggcgccccttcttccagccgtaccacctcatcatcgtccaggacggcgac 152
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
|| | ||| |||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 153 cccagtaaggccatcaaggttcccgagggcttcgactacgacctttacaaccgcaacgac 212
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
||||||||||| ||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 213 atcaaccgcattctcggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgc 272
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 273 tgcttcggctacatggtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttc 332
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 333 gtggccaaggacccatctggcaaagacatcaatgctcttgagcagcacatcaagaacctc 392
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|||||||| || |||||||| |||||||| ||| |||| |||||||||||||| || ||
Sbjct: 393 ctcagcccgtcaaccccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcg 452
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|||||||| |||||||||||||||||||| ||||||||||| | ||| || ||||| ||
Sbjct: 453 gactttgttcgtggataccccttcagccttagggagggtgcacccactgctgtctctcat 512
Query: 635 ggcctgtggctgaacatccctgactatgatgc 666
||||| ||||||||||||||||||||||||||
Sbjct: 513 ggcctttggctgaacatccctgactatgatgc 544
>gb|BQ664538.1|BQ664538 HV03L24u HV Hordeum vulgare subsp. vulgare cDNA clone HV03L24
3-PRIME, mRNA sequence
Length = 604
Score = 690 bits (348), Expect = 0.0
Identities = 540/604 (89%)
Strand = Plus / Plus
Query: 218 gagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgacccg 277
||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 1 gagatgtggcgccccttcttccagccgtaccacctcatcatcgtccaggacggcgacccc 60
Query: 278 accaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatc 337
| ||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 61 agtaaggccatcaaggttcccgagggcttcgactacgacctttacaaccgcaacgacatc 120
Query: 338 aaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgc 397
|||||||| ||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 121 aaccgcattctcggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgc 180
Query: 398 ttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgtt 457
|||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||
Sbjct: 181 ttcggctacatggtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtg 240
Query: 458 gccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctc 517
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccaaggacccatctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctc 300
Query: 518 agcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgac 577
||||| || |||||||| |||||||| ||| |||| |||||||||||||| || || |||
Sbjct: 301 agcccgtcaaccccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggac 360
Query: 578 tttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccacggc 637
||||| |||||||||||||||||||| ||||||||||| | ||| || ||||| || |||
Sbjct: 361 tttgttcgtggataccccttcagccttagggagggtgcacccactgctgtctctcatggc 420
Query: 638 ctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcccaaggagagg 697
|| |||||||||||||||||||||||||| ||||||||| ||||||| || ||||||
Sbjct: 421 ctttggctgaacatccctgactatgatgcacccacacagatggtcaaacctcgtgagagg 480
Query: 698 aatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgt 757
|| |||||||||||||| ||| |||| || ||||||||||| |||||||||||||||
Sbjct: 481 aacagcaggtatgttgatgccgtcctgactattcccaagggaacattgttccccatgtgt 540
Query: 758 ggcatgaaccttgccttcgacagggatctcattggccctgctatgtactttggtctcatg 817
|||||||||||||| || ||| | | ||||| |||||||| ||||||||||| ||||||
Sbjct: 541 ggcatgaaccttgcttttgaccgtcagctcatcggccctgcaatgtactttggcctcatg 600
Query: 818 ggtg 821
||||
Sbjct: 601 ggtg 604
>gb|BE519906.1|BE519906 HV_CEb0021K14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021K14f, mRNA sequence
Length = 723
Score = 678 bits (342), Expect = 0.0
Identities = 603/690 (87%)
Strand = Plus / Plus
Query: 217 ggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccc 276
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 25 ggagatgtggcggcccttcttccagccgtaccacctcatcatcgtgcaggacggcgaccc 84
Query: 277 gaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgacat 336
|| | |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cacgaggaccgtcatggtgcctgagggcttcgactacgagctctacaaccgcaacgacat 144
Query: 337 caaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgctg 396
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 caaccgcatcctcggccccaaggcctcctgcatctccttcaaggactccgcctgccgctg 204
Query: 397 cttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgt 456
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 cttcggctacatggtctccaagaagaagtacgtctacaccatcgacgacgactgcttcgt 264
Query: 457 tgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctcct 516
||||||||||| | || ||||| ||| | || || | |||||||| ||||||| ||
Sbjct: 265 cgccaaggaccccacggggaaggacatcgacgcgctggccaagcacatccagaacctgct 324
Query: 517 cagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctga 576
| |||| ||||| ||| |||||||||||||| |||||||||| |||| ||||| || ||
Sbjct: 325 ctgcccgtccacgccgctcttcttcaacaccttgtacgacccataccaggagggcgccga 384
Query: 577 ctttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccacgg 636
||| ||||| || ||||| ||||||||| ||||||| | | ||||||||| || |||||
Sbjct: 385 cttcgtgcgcggctacccgttcagcctccgggagggcgtgcccaccgccgtatcgcacgg 444
Query: 637 cctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcccaaggagag 696
||| ||||| |||||||| ||||| || || ||||| |||||||||||||| |||| |
Sbjct: 445 cctctggctcaacatccccgactacgacgcccccacgcagctggtcaagccgcgggagcg 504
Query: 697 gaatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtg 756
|| | ||||| || || || |||||||| |||||||||||| || | |||||||||||
Sbjct: 505 caacggcaggtacgtcgacgccgtcatgaccatccccaagggatccctcttccccatgtg 564
Query: 757 tggcatgaaccttgccttcgacagggatctcattggccctgctatgtactttggtctcat 816
||||||||||| ||||||||| | || ||||| ||||| || ||||||||||| |||||
Sbjct: 565 cggcatgaacctcgccttcgaccgcgagctcatcggcccggccatgtactttggcctcat 624
Query: 817 gggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggt 876
||| || |||||||||||||| |||||||||||||||||||| || |||||||| |||||
Sbjct: 625 gggcgacggccagcccatcggacgctacgacgacatgtgggccggctggtgtgttaaggt 684
Query: 877 catctgcgaccacctgagcctgggagtcaa 906
||||||||||||||| | || ||||||||
Sbjct: 685 gatctgcgaccacctggggctcggagtcaa 714
>gb|CA018532.1|CA018532 HV08O11r HV Hordeum vulgare subsp. vulgare cDNA clone HV08O11
5-PRIME, mRNA sequence
Length = 671
Score = 678 bits (342), Expect = 0.0
Identities = 558/630 (88%)
Strand = Plus / Plus
Query: 435 ccatcgacgacgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttg 494
|||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 11 ccatcgacgacgactgcttcgtggccaaggacccatctggcaaagacatcaatgctcttg 70
Query: 495 agcagcacatcaagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacg 554
|||||||||||||||||||||||||||| || |||||||| |||||||| ||| |||| |
Sbjct: 71 agcagcacatcaagaacctcctcagcccgtcaaccccgtttttcttcaataccttgtatg 130
Query: 555 acccctaccgtgagggtgctgactttgtgcgtggataccccttcagcctcagggagggtg 614
||||||||||||| || || |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 131 acccctaccgtgaaggcgcggactttgttcgtggataccccttcagccttagggagggtg 190
Query: 615 ctcacaccgccgtctcccacggcctgtggctgaacatccctgactatgatgctcccacac 674
| | ||| || ||||| || ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 191 cacccactgctgtctctcatggcctttggctgaacatccctgactatgatgcacccacac 250
Query: 675 agctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgacaatcccca 734
|| ||||||| || |||||||| |||||||||||||| ||| |||| || ||||
Sbjct: 251 agatggtcaaacctcgtgagaggaacagcaggtatgttgatgccgtcctgactattccca 310
Query: 735 agggaaccttgttccccatgtgtggcatgaaccttgccttcgacagggatctcattggcc 794
||||||| ||||||||||||||||||||||||||||| || ||| | | ||||| ||||
Sbjct: 311 agggaacattgttccccatgtgtggcatgaaccttgcttttgaccgtcagctcatcggcc 370
Query: 795 ctgctatgtactttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgt 854
|||| ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 371 ctgcaatgtactttggcctcatgggtgatggccagcctattggtcgctacgatgacatgt 430
Query: 855 gggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcc 914
|||| |||||||| || |||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 431 gggctggatggtgcgtcaaggtcatctgcgaccacttgagccttggagtgaagactggcc 490
Query: 915 tgccatacatctggcacagcaaggctagcaaccccttcgttaacttgaagaaggaataca 974
|||||||| | ||||||||||||||||||||||| || || |||||||||||||| ||||
Sbjct: 491 tgccatacctgtggcacagcaaggctagcaacccatttgtcaacttgaagaaggagtaca 550
Query: 975 agggcatcttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaagg 1034
|||||||||||||||||||||||||||| ||||| |||||||||| ||| | ||||||
Sbjct: 551 agggcatcttctggcaggaggacatcattccctttttccagaacgccaccctttccaagg 610
Query: 1035 actgcgacaccgtccaaaagtgctacatct 1064
| || ||||| ||||| |||||||||||||
Sbjct: 611 agtgtgacacagtccagaagtgctacatct 640
>gb|BQ470094.1|BQ470094 HX01M05T HX Hordeum vulgare subsp. vulgare cDNA clone HX01M05
5-PRIME, mRNA sequence
Length = 643
Score = 676 bits (341), Expect = 0.0
Identities = 509/565 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 79 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 138
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 139 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 198
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 199 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 258
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 259 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 318
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 319 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 378
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||| | ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 379 gtctccaaaaagaagtccgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 438
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || || |||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 439 tctggcaaagacatgaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 498
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 499 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 558
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
||||||||||| || ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 559 taccccttcagacttagggagggtgcacccactgctgtctctcatggcctttggctgaac 618
Query: 650 atccctgactatgatgctcccacac 674
||||||||||||||||| |||||||
Sbjct: 619 atccctgactatgatgcacccacac 643
>gb|CA018858.1|CA018858 HV09N21r HV Hordeum vulgare subsp. vulgare cDNA clone HV09N21
5-PRIME, mRNA sequence
Length = 610
Score = 674 bits (340), Expect = 0.0
Identities = 535/600 (89%)
Strand = Plus / Plus
Query: 384 ccgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacg 443
|||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||
Sbjct: 11 ccgcgtgccgctgcttcggctacatggtctccaaaaagaagtacgtcttcaccatcgacg 70
Query: 444 acgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcaca 503
||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 71 acgactgcttcgtggccaaggacccatctggcaaagacatcaatgctcttgagcagcaca 130
Query: 504 tcaagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctacc 563
||||||||||||||||||| || |||||||| |||||||| ||| |||| ||||||||||
Sbjct: 131 tcaagaacctcctcagcccgtcaaccccgtttttcttcaataccttgtatgacccctacc 190
Query: 564 gtgagggtgctgactttgtgcgtggataccccttcagcctcagggagggtgctcacaccg 623
|||| || || |||||||| |||||||||||||||||||| ||||||||||| | ||| |
Sbjct: 191 gtgaaggcgcggactttgttcgtggataccccttcagccttagggagggtgcacccactg 250
Query: 624 ccgtctcccacggcctgtggctgaacatccctgactatgatgctcccacacagctggtca 683
| ||||| || ||||| |||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 251 ctgtctctcatggcctttggctgaacatccctgactatgatgcacccacacagatggtca 310
Query: 684 agcccaaggagaggaatgagaggtatgttgatgctgtcatgacaatccccaagggaacct 743
| || |||||||| |||||||||||||| ||| |||| || ||||||||||| |
Sbjct: 311 aacctcgtgagaggaacagcaggtatgttgatgccgtcctgactattcccaagggaacat 370
Query: 744 tgttccccatgtgtggcatgaaccttgccttcgacagggatctcattggccctgctatgt 803
|||||||||||||||||||||||||||| || ||| | | ||||| |||||||| ||||
Sbjct: 371 tgttccccatgtgtggcatgaaccttgcttttgaccgtcagctcatcggccctgcaatgt 430
Query: 804 actttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggat 863
||||||| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct: 431 actttggcctcatgggtgatggccagcctattggtcgctacgatgacatgtgggctggat 490
Query: 864 ggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccataca 923
|||| || |||||||||||||||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 491 ggtgcgtcaaggtcatctgcgaccacttgagccttggagtgaagactggcctgccatacc 550
Query: 924 tctggcacagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatct 983
| ||||||||||||||||||||||| || || |||||||||||||| |||||||||||||
Sbjct: 551 tgtggcacagcaaggctagcaacccatttgtcaacttgaagaaggagtacaagggcatct 610
>gb|CA025955.1|CA025955 HZ53K05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53K05
5-PRIME, mRNA sequence
Length = 609
Score = 672 bits (339), Expect = 0.0
Identities = 495/547 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 63 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 122
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 182
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 183 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 242
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 243 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 302
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 303 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 362
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 363 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 422
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 423 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 482
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 483 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 542
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 543 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 602
Query: 650 atccctg 656
|||||||
Sbjct: 603 atccctg 609
>gb|BQ471977.1|BQ471977 HV04A24r HV Hordeum vulgare subsp. vulgare cDNA clone HV04A24
5-PRIME, mRNA sequence
Length = 621
Score = 670 bits (338), Expect = 0.0
Identities = 494/546 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 76 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 135
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 136 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 195
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 196 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 255
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 256 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 315
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 375
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 376 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 435
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 436 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 495
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 496 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 555
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 556 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 615
Query: 650 atccct 655
||||||
Sbjct: 616 atccct 621
>gb|CA008745.1|CA008745 HU11P09r HU Hordeum vulgare subsp. vulgare cDNA clone HU11P09
5-PRIME, mRNA sequence
Length = 629
Score = 670 bits (338), Expect = 0.0
Identities = 509/566 (89%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 53 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 112
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 172
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 232
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 233 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 292
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 352
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 353 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 412
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 413 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 472
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|| ||||| ||||| |||||||||||||| | |||||||| | || || || || ||
Sbjct: 473 gattttgttcgtgggtaccccttcagccttcgtgagggtgccccaactgctgtttctcat 532
Query: 635 ggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcccaaggag 694
|| || ||||| ||||| || ||||||||||| || || ||||| |||||||| |||
Sbjct: 533 gggctctggcttaacattccagactatgatgcccctacccagcttgtcaagcctcttgag 592
Query: 695 aggaatgagaggtatgttgatgctgt 720
|| ||| | |||||||| ||||||||
Sbjct: 593 agaaataataggtatgtggatgctgt 618
>gb|AV923529.1|AV923529 AV923529 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13h23 5', mRNA sequence
Length = 602
Score = 668 bits (337), Expect = 0.0
Identities = 484/533 (90%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 59 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 118
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 178
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 238
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 239 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 298
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 358
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 359 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 418
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 419 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 478
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|| ||||| ||||| |||||||||||||| | |||||||| | || || || || ||
Sbjct: 479 gattttgttcgtgggtaccccttcagccttcgtgagggtgccccaactgctgtttctcat 538
Query: 635 ggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcc 687
|| || ||||| ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 539 gggctctggcttaacattccagactatgatgcccctacccagcttgtcaagcc 591
>gb|BU972635.1|BU972635 HB22E05r BC Hordeum vulgare subsp. vulgare cDNA clone HB22E05
5-PRIME, mRNA sequence
Length = 604
Score = 668 bits (337), Expect = 0.0
Identities = 484/533 (90%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 71 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 130
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 190
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 250
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 251 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 310
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 370
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 371 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 430
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 431 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 490
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|| ||||| ||||| |||||||||||||| | |||||||| | || || || || ||
Sbjct: 491 gattttgttcgtgggtaccccttcagccttcgtgagggtgccccaactgctgtttctcat 550
Query: 635 ggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcc 687
|| || ||||| ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 551 gggctctggcttaacattccagactatgatgcccctacccagcttgtcaagcc 603
>gb|BU977042.1|BU977042 HA10L23r HA Hordeum vulgare subsp. vulgare cDNA clone HA10L23
5-PRIME, mRNA sequence
Length = 594
Score = 668 bits (337), Expect = 0.0
Identities = 484/533 (90%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 58 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 117
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 177
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 237
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 238 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 297
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 357
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 358 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 417
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 418 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 477
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|| ||||| ||||| |||||||||||||| | |||||||| | || || || || ||
Sbjct: 478 gattttgttcgtgggtaccccttcagccttcgtgagggtgccccaactgctgtttctcat 537
Query: 635 ggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcc 687
|| || ||||| ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 538 gggctctggcttaacattccagactatgatgcccctacccagcttgtcaagcc 590
>gb|BU982372.1|BU982372 HA26F11r HA Hordeum vulgare subsp. vulgare cDNA clone HA26F11
5-PRIME, mRNA sequence
Length = 589
Score = 666 bits (336), Expect = 0.0
Identities = 522/584 (89%)
Strand = Plus / Plus
Query: 298 cgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgggcccaa 357
|||||||||||||||||| || |||||||||||||||||||||||||| ||||| || ||
Sbjct: 6 cgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctcggcccaaa 65
Query: 358 ggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatggtctccaa 417
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 ggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatggtctccaa 125
Query: 418 gaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccatctggcaa 477
||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 126 aaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggacccatctggcaa 185
Query: 478 ggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccaccccgttctt 537
|| ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 186 agacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaaccccgttttt 245
Query: 538 cttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtggatacccctt 597
|||||| ||| |||| |||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 246 cttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtggatacccctt 305
Query: 598 cagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaacatccctga 657
|||||| ||||||||||| | ||| || ||||| || ||||| |||||||||||||||||
Sbjct: 306 cagccttagggagggtgcacccactgctgtctctcatggcctttggctgaacatccctga 365
Query: 658 ctatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgc 717
||||||||| ||||||||| ||||||| || |||||||| ||||||||||||||
Sbjct: 366 ctatgatgcacccacacagatggtcaaacctcgtgagaggaacagcaggtatgttgatgc 425
Query: 718 tgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaaccttgccttcga 777
||| |||| || ||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 426 cgtcctgactattcccaagggaacattgttccccatgtgtggcatgaaccttgcttttga 485
Query: 778 cagggatctcattggccctgctatgtactttggtctcatgggtgatggccagcccatcgg 837
| | | ||||| |||||||| ||||||||||| |||||||||||||||||||| || ||
Sbjct: 486 ccgtcagctcatcggccctgcaatgtactttggcctcatgggtgatggccagcctattgg 545
Query: 838 tcgctacgacgacatgtgggcaggatggtgtgtgaaggtcatct 881
||||||||| ||||||||||| |||||||| || ||||||||||
Sbjct: 546 tcgctacgatgacatgtgggctggatggtgcgtcaaggtcatct 589
>gb|BU971916.1|BU971916 HB20A22r BC Hordeum vulgare subsp. vulgare cDNA clone HB20A22
5-PRIME, mRNA sequence
Length = 591
Score = 660 bits (333), Expect = 0.0
Identities = 420/449 (93%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 76 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 135
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 195
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 255
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 256 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 315
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 375
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 376 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 435
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 436 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 495
Query: 575 gactttgtgcgtggataccccttcagcct 603
|| ||||| ||||| ||||||||||||||
Sbjct: 496 gattttgttcgtgggtaccccttcagcct 524
>gb|BE421899.1|BE421899 HWM016cC.05r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM016cC.05, mRNA sequence
Length = 729
Score = 658 bits (332), Expect = 0.0
Identities = 525/590 (88%)
Strand = Plus / Plus
Query: 179 gacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcggcccttcttc 238
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 124 gacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggcccttcttc 183
Query: 239 cagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatcaaggtgccc 298
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 184 cagccctaccacctcatcatcgtgcaggacggcgacccgaccaaggtcatcaaggtgccc 243
Query: 299 gagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgggcccaag 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 244 gagggcttcgactacgagctctacaaccgcaacgacgtcaaccgcatcctcggccccaag 303
Query: 359 gcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatggtctccaag 418
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 304 gcctcctgcatctccttcaaggactctgcctgccgctgcttcggatacatggtctccaag 363
Query: 419 aagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccatctggcaag 478
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||
Sbjct: 364 aagaagtacatctacaccatcgacgacgactgcttcgttgctaaggatccatcaggaaag 423
Query: 479 gatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccaccccgttcttc 538
|| |||||||| |||||||||||||| |||||||| || ||||| || || || || |||
Sbjct: 424 gacatcaatgcacttgagcagcacattaagaaccttctgagcccttcaactccatttttc 483
Query: 539 ttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtggataccccttc 598
||||| || ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 484 ttcaatactctgtacgacccataccgtgagggtgctgattttgttcgtgggtaccccttc 543
Query: 599 agcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaacatccctgac 658
||||| | |||||||| | || || || || || || || ||||| ||||| || |||
Sbjct: 544 agccttcgtgagggtgccccaactgctgtttctcatgggctctggcttaacattccagac 603
Query: 659 tatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgct 718
|||||||| || || ||||| |||||||| ||||| ||| | |||||||| ||||||
Sbjct: 604 tatgatgcccctacccagcttgtcaagcctcttgagagaaataataggtatgtggatgct 663
Query: 719 gtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacct 768
|| | |||||||| || || |||||||| |||||||||| ||||||||
Sbjct: 664 gttcttacaatcccgaanggtaccttgtttnccatgtgtgggatgaacct 713
>gb|BU975024.1|BU975024 HB29N19r BC Hordeum vulgare subsp. vulgare cDNA clone HB29N19
5-PRIME, mRNA sequence
Length = 518
Score = 658 bits (332), Expect = 0.0
Identities = 419/448 (93%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 71 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 130
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 190
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 250
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 251 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 310
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 370
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 371 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 430
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 431 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 490
Query: 575 gactttgtgcgtggataccccttcagcc 602
|| ||||| ||||| |||||||||||||
Sbjct: 491 gattttgttcgtgggtaccccttcagcc 518
>gb|CA019907.1|CA019907 HV13K22r HV Hordeum vulgare subsp. vulgare cDNA clone HV13K22
5-PRIME, mRNA sequence
Length = 516
Score = 658 bits (332), Expect = 0.0
Identities = 419/448 (93%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 69 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 128
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 188
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 248
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 249 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 308
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 368
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 369 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 428
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 429 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 488
Query: 575 gactttgtgcgtggataccccttcagcc 602
|| ||||| ||||| |||||||||||||
Sbjct: 489 gattttgttcgtgggtaccccttcagcc 516
>gb|CK122380.1|CK122380 BES1824103a22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A223 5-PRIME, mRNA sequence
Length = 639
Score = 656 bits (331), Expect = 0.0
Identities = 511/567 (90%), Gaps = 3/567 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 73 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 132
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 133 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 192
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 193 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 252
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 253 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 312
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 313 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 372
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 373 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 432
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 433 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 492
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 493 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 552
Query: 590 taccccttcagcctcagggagggtgctcacaccgc-cgtctcccacggcc-tgtggc-tg 646
|||||||||||||| ||||||||||| | ||| || ||||| || |||| | |||| ||
Sbjct: 553 taccccttcagccttagggagggtgcacccactgcttgtctctcatggccttttggcttg 612
Query: 647 aacatccctgactatgatgctcccaca 673
|||||||||||||||||||| ||||||
Sbjct: 613 aacatccctgactatgatgcacccaca 639
>gb|BQ755701.1|BQ755701 EBed07_SQ003_H12_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_H12 5', mRNA sequence
Length = 529
Score = 652 bits (329), Expect = 0.0
Identities = 419/449 (93%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 15 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 74
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 134
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 194
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 195 gtcaaccgcatcctcggccccaaagcctcctgcatctccttcaaggactctgcctgccgc 254
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 314
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 315 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 374
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 375 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 434
Query: 575 gactttgtgcgtggataccccttcagcct 603
|| ||||| ||||| ||||||||||||||
Sbjct: 435 gattttgttcgtgggtaccccttcagcct 463
>gb|BU982079.1|BU982079 HA25H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA25H11
5-PRIME, mRNA sequence
Length = 593
Score = 650 bits (328), Expect = 0.0
Identities = 484/536 (90%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 58 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 117
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 118 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 177
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 178 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 237
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 238 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 297
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 298 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 357
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 358 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 417
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 418 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 477
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 478 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 537
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggct 645
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||
Sbjct: 538 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggct 593
>gb|BU996049.1|BU996049 HM12D24r HM Hordeum vulgare subsp. vulgare cDNA clone HM12D24
5-PRIME, mRNA sequence
Length = 552
Score = 648 bits (327), Expect = 0.0
Identities = 450/491 (91%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 62 acgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctcgacttc 121
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 122 ctcgagatgtggcgccccttcttccagccgtaccacctcatcatcgtccaggacggcgac 181
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
|| | ||| |||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 182 cccagtaaggccatcaaggttcccgagggcttcgactacgacctttacaaccgcaacgac 241
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
||||||||||| ||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 242 atcaaccgcattctcggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgc 301
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 302 tgcttcggctacatggtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttc 361
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 362 gtggccaaggacccatctggcaaagacatcaatgctcttgagcagcacatcaagaacctc 421
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|||||||| || |||||||| |||||||| ||| |||| |||||||||||||| || ||
Sbjct: 422 ctcagcccgtcaaccccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcg 481
Query: 575 gactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccac 634
|||||||| |||||||||||||||||||| ||||||||||| | ||| || ||||| ||
Sbjct: 482 gactttgttcgtggataccccttcagccttagggagggtgcacccactgctgtctctcat 541
Query: 635 ggcctgtggct 645
||||| |||||
Sbjct: 542 ggcctttggct 552
>gb|AV914822.1|AV914822 AV914822 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8f08 5', mRNA sequence
Length = 573
Score = 646 bits (326), Expect = 0.0
Identities = 509/569 (89%), Gaps = 1/569 (0%)
Strand = Plus / Plus
Query: 320 tacaaccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaag 379
|||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||
Sbjct: 6 tacaaccgcaacgacatcaaccgcattctcgg-cccaangcctcatgcatctccttcaag 64
Query: 380 gactccgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatc 439
|||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||
Sbjct: 65 gactccgcgtgccgctgcttcggctacatggtctccaaaaagaagtacgtcttcaccatc 124
Query: 440 gacgacgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcag 499
||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 125 gacgacgactgcttcgtggccaaggacccatctggcaaagacatcaatgctcttgagcag 184
Query: 500 cacatcaagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccc 559
||||||||||||||||||||||| || |||||||| |||||||| ||| |||| ||||||
Sbjct: 185 cacatcaagaacctcctcagcccgtcaaccccgtttttcttcaataccttgtatgacccc 244
Query: 560 taccgtgagggtgctgactttgtgcgtggataccccttcagcctcagggagggtgctcac 619
|||||||| || || |||||||| |||||||||||||||||||| ||||||||||| | |
Sbjct: 245 taccgtgaaggcgcggactttgttcgtggataccccttcagccttagggagggtgcaccc 304
Query: 620 accgccgtctcccacggcctgtggctgaacatccctgactatgatgctcccacacagctg 679
|| || ||||| || ||||| |||||||||||||||||||||||||| ||||||||| ||
Sbjct: 305 actgctgtctctcatggcctttggctgaacatccctgactatgatgcacccacacagatg 364
Query: 680 gtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgacaatccccaaggga 739
||||| || |||||||| |||||||||||||| ||| |||| || |||||||||
Sbjct: 365 gtcaaacctcgtgagaggaacagcaggtatgttgatgccgtcctgactattcccaaggga 424
Query: 740 accttgttccccatgtgtggcatgaaccttgccttcgacagggatctcattggccctgct 799
|| ||||||||||||||||||||||||||||| || ||| | | ||||| ||||||||
Sbjct: 425 acattgttccccatgtgtggcatgaaccttgcttttgaccgtcagctcatcggccctgca 484
Query: 800 atgtactttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggca 859
||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 485 atgtactttggcctcatgggtgatggccagcctattggtcgctacgatgacatgtgggct 544
Query: 860 ggatggtgtgtgaaggtcatctgcgacca 888
|||||||| || |||||||||||||||||
Sbjct: 545 ggatggtgcgtcaaggtcatctgcgacca 573
>gb|BG369153.2|BG369153 HVSMEi0022M23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0022M23f, mRNA sequence
Length = 811
Score = 642 bits (324), Expect = 0.0
Identities = 561/640 (87%)
Strand = Plus / Plus
Query: 156 cgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcc 215
|||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 98 cgccgctgctcaaggacgagctggacatcgtcatcccgacgatccggaacctggacttcc 157
Query: 216 tggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgacc 275
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 158 tcgagatgtggcggcccttcttccagccgtaccacctcatcatcgtgcaggacggcgacc 217
Query: 276 cgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgaca 335
| || | |||| ||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 ccacgaggaccgtcatggtgcctgagggcttcgactacgagctctacaaccgcaacgaca 277
Query: 336 tcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgct 395
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactccgcctgccgct 337
Query: 396 gcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcg 455
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 338 gcttcggctacatggtctccaagaagaagtacgtctacaccatcgacgacgactgcttcg 397
Query: 456 ttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctcc 515
| ||||||||||| | || ||||| ||| | || || | |||||||| ||||||| |
Sbjct: 398 tcgccaaggaccccacggggaaggacatcgacgcgctggccaagcacatccagaacctgc 457
Query: 516 tcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctg 575
|| |||| ||||| ||| |||||||||||||| |||||||||| |||| ||||| || |
Sbjct: 458 tctgcccgtccacgccgctcttcttcaacaccttgtacgacccataccaggagggcgccg 517
Query: 576 actttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgtctcccacg 635
|||| ||||| || ||||| ||||||||| ||||||| | | ||||||||| || ||||
Sbjct: 518 acttcgtgcgcggctacccgttcagcctccgggagggcgtgcccaccgccgtatcgcacg 577
Query: 636 gcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcccaaggaga 695
|||| ||||| |||||||| ||||| || || ||||| |||||||||||||| ||||
Sbjct: 578 gcctctggctcaacatccccgactacgacgcccccacgcagctggtcaagccgcgggagc 637
Query: 696 ggaatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttccccatgt 755
| || | ||||| || || || |||||||| ||||||| |||| || | ||||||||||
Sbjct: 638 gcaacggcaggtacgtcgacgccgtcatgaccatccccaggggatccctcttccccatgt 697
Query: 756 gtggcatgaaccttgccttcgacagggatctcattggccc 795
| ||||||||||| ||||||||| |||| ||||| |||||
Sbjct: 698 gcggcatgaacctcgccttcgaccgggagctcatcggccc 737
>gb|BG367283.2|BG367283 HVSMEi0011J21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011J21f, mRNA sequence
Length = 823
Score = 638 bits (322), Expect = 0.0
Identities = 424/458 (92%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 40 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 99
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 100 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtggggggcggcgac 159
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 219
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 220 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 279
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 339
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 340 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 399
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgct 574
|| ||||| || || || || |||||||| || ||||||||||| |||||||||||||||
Sbjct: 400 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccgtgagggtgct 459
Query: 575 gactttgtgcgtggataccccttcagcctcagggaggg 612
|| ||||| ||||| |||||||||||||| |||||||
Sbjct: 460 gattttgttcgtgggtaccccttcagccttcgggaggg 497
>gb|BM099098.2|BM099098 EBpi05_SQ002_O24_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_O24 5', mRNA sequence
Length = 603
Score = 636 bits (321), Expect = 0.0
Identities = 485/536 (90%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 155 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 214
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 59 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 118
Query: 215 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 274
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 178
Query: 275 ccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 334
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ccgaccaaggtcatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgac 238
Query: 335 atcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgc 394
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 239 gtcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactctgcctgccgc 298
Query: 395 tgcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 454
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgcttcggatacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttc 358
Query: 455 gttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctc 514
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 359 gttgctaaggatccatcaggaaaggacatcaatgcacttgagcagcacattaagaacctt 418
Query: 515 ctcagcccatccaccccgttcttcttcaacaccctgtacgacccctacc-gtgagggtgc 573
|| ||||| || || || || |||||||| || ||||||||||| |||| ||||||||||
Sbjct: 419 ctgagcccttcaactccatttttcttcaatactctgtacgacccataccggtgagggtgc 478
Query: 574 tgactttgtg-cgtggataccccttcagcc-tcagggagggtgctcacaccgccgtctcc 631
||| ||||| ||||| ||||||||||||| || ||||||||| | || || || ||
Sbjct: 479 tgattttgtntcgtgggtaccccttcagccttcgtggagggtgccccaactgctgtttct 538
Query: 632 cacggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcc 687
|| || || ||||| ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 539 catgggctctggcttaacattccagactatgatgcccctacccagcttgtcaagcc 594
>gb|BU990378.1|BU990378 HF24N15r HF Hordeum vulgare subsp. vulgare cDNA clone HF24N15
5-PRIME, mRNA sequence
Length = 579
Score = 636 bits (321), Expect = 0.0
Identities = 507/569 (89%)
Strand = Plus / Plus
Query: 253 catcatcgtgcaggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgacta 312
||||||||| |||||||||||||| | ||| |||||||||| |||||||||||||||||
Sbjct: 11 catcatcgtccaggacggcgaccccagtaaggccatcaaggttcccgagggcttcgacta 70
Query: 313 cgagctctacaaccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctc 372
||| || |||||||||||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 71 cgacctttacaaccgcaacgacatcaaccgcattctcggcccaaaggcctcatgcatctc 130
Query: 373 cttcaaggactccgcctgccgctgcttcggctacatggtctccaagaagaagtacatcta 432
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 131 cttcaaggactccgcgtgccgctgcttcggctacatggtctccaaaaagaagtacgtctt 190
Query: 433 caccatcgacgacgactgcttcgttgccaaggacccatctggcaaggatatcaatgctct 492
|||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 191 caccatcgacgacgactgcttcgtggccaaggacccatctggcaaagacatcaatgctct 250
Query: 493 tgagcagcacatcaagaacctcctcagcccatccaccccgttcttcttcaacaccctgta 552
|||||||||||||||||||||||||||||| || |||||||| |||||||| ||| ||||
Sbjct: 251 tgagcagcacatcaagaacctcctcagcccgtcaaccccgtttttcttcaataccttgta 310
Query: 553 cgacccctaccgtgagggtgctgactttgtgcgtggataccccttcagcctcagggaggg 612
|||||||||||||| || || |||||||| |||||||||||||||||||| ||||||||
Sbjct: 311 tgacccctaccgtgaaggcgcggactttgttcgtggataccccttcagccttagggaggg 370
Query: 613 tgctcacaccgccgtctcccacggcctgtggctgaacatccctgactatgatgctcccac 672
||| | ||| || ||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 371 tgcacccactgctgtctctcatggcctttggctgaacatccctgactatgatgcacccac 430
Query: 673 acagctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgacaatccc 732
|||| ||||||| || |||||||| |||||||||||||| ||| |||| || ||
Sbjct: 431 acagatggtcaaacctcgtgagaggaacagcaggtatgttgatgccgtcctgactattcc 490
Query: 733 caagggaaccttgttccccatgtgtggcatgaaccttgccttcgacagggatctcattgg 792
||||||||| ||||||||||||||||||||||||||||| || ||| | | ||||| ||
Sbjct: 491 caagggaacattgttccccatgtgtggcatgaaccttgcttttgaccgtcagctcatcgg 550
Query: 793 ccctgctatgtactttggtctcatgggtg 821
|||||| ||||||||||| ||||||||||
Sbjct: 551 ccctgcaatgtactttggcctcatgggtg 579
>gb|BG301083.1|BG301083 HVSMEb0019H23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019H23f, mRNA sequence
Length = 583
Score = 634 bits (320), Expect = e-180
Identities = 488/544 (89%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 39 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 98
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 99 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 158
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| || ||||||||||| | ||| |||||
Sbjct: 159 cccttcttccagccgtaccacctcatcatcgtccaagacggcgaccccagtaaggccatc 218
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||| ||||||| || |||||||||||||||||||||||||| |||
Sbjct: 219 aaggttcccgagggcttctactacgacctttacaaccgcaacgacatcaaccgcattctc 278
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 279 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 338
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 339 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 398
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || |||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 399 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctgctcagcccgtcaacc 458
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| | || |||||||| ||||||
Sbjct: 459 ccgtttttcttcaataccttgtatgacccctaccgtgaaagcgcggactttgttcgtgga 518
Query: 590 taccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaac 649
|||||||||||||| ||||||||||| | ||| || ||||| || ||||| |||||||||
Sbjct: 519 taccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaac 578
Query: 650 atcc 653
||||
Sbjct: 579 atcc 582
>gb|AV915723.1|AV915723 AV915723 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15m03 5', mRNA sequence
Length = 571
Score = 630 bits (318), Expect = e-179
Identities = 450/494 (91%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 74 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 133
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 134 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 193
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 194 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 253
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 254 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 313
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 314 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 373
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 374 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 433
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 434 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 493
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 494 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 553
Query: 590 taccccttcagcct 603
||||||||||||||
Sbjct: 554 taccccttcagcct 567
>gb|BM100481.2|BM100481 EBma01_SQ005_F16_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_F16 5', mRNA sequence
Length = 555
Score = 628 bits (317), Expect = e-178
Identities = 449/493 (91%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 63 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 122
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 182
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 183 cccttcttccagccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 242
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 243 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 302
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 303 ggcccaaaggcctcatgcatctccttcaaggactccgcgtgccgctgcttcggctacatg 362
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 363 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 422
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 423 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtcaacc 482
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| |||||||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 483 ccgtttttcttcaataccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 542
Query: 590 taccccttcagcc 602
|||||||||||||
Sbjct: 543 taccccttcagcc 555
>gb|BG368292.2|BG368292 HVSMEi0017H10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0017H10f, mRNA sequence
Length = 655
Score = 626 bits (316), Expect = e-178
Identities = 513/576 (89%), Gaps = 2/576 (0%)
Strand = Plus / Plus
Query: 110 gcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaag 169
|||||||| || |||||||| || || || |||||| || || |||||||||||||||
Sbjct: 68 gcaatggcagggacggtgactgtgcccggatcgtcggtgccatcgacgccgctgctcaag 127
Query: 170 gacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcgg 229
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 128 gacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggcgc 187
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
||||||||| |||| ||||||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 188 cccttcttc-agccgtaccacctcatcatcgtccaggacggcgaccccagtaaggccatc 246
Query: 290 aaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctc 349
||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 247 aaggttcccgagggcttcgactacgacctttacaaccgcaacgacatcaaccgcattctc 306
Query: 350 gggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatg 409
|| || |||||||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 307 ggcccaaaggcctcatgcatctccttcaaggcctccgcgtgccgctgcttcggctacatg 366
Query: 410 gtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccca 469
|||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 367 gtctccaaaaagaagtacgtcttcaccatcgacgacgactgcttcgtggccaaggaccca 426
Query: 470 tctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacc 529
|||||||| || ||||||||||||||||||||||||||||||||||||| ||| || |||
Sbjct: 427 tctggcaaagacatcaatgctcttgagcagcacatcaagaacctcctcaacccgtcaacc 486
Query: 530 ccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgga 589
||||| || |||| ||| |||| |||||||||||||| || || |||||||| ||||||
Sbjct: 487 ccgttttttttcattaccttgtatgacccctaccgtgaaggcgcggactttgttcgtgga 546
Query: 590 ta-ccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaa 648
|| |||||||||||| ||||||||||| | ||| || ||||| || ||||| ||||||||
Sbjct: 547 tacccccttcagccttagggagggtgcacccactgctgtctctcatggcctttggctgaa 606
Query: 649 catccctgactatgatgctcccacacagctggtcaa 684
| ||||||||| |||||| ||| ||||| |||||||
Sbjct: 607 cttccctgactttgatgcacccccacagatggtcaa 642
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 207,836
Number of Sequences: 312970
Number of extensions: 207836
Number of successful extensions: 58270
Number of sequences better than 0.5: 286
Number of HSP's better than 0.5 without gapping: 285
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57208
Number of HSP's gapped (non-prelim): 930
length of query: 1563
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1544
effective length of database: 169,188,109
effective search space: 261226440296
effective search space used: 261226440296
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)